View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20261_high_24 (Length: 328)
Name: NF20261_high_24
Description: NF20261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20261_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 46091473 - 46091162
Alignment:
| Q |
1 |
gtcaacaaaaggaaaagcaaatggtagagtgtatataaacaaagaaaaagtgaggaaaagatgaggctcctgctgtcacattgtaagtaactggatatag |
100 |
Q |
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| T |
46091473 |
gtcaacaaaaggaaaagcaaatggtagagtgtatataaacaaagaaaaagtgaggaaaagatgaggctcctgctgtcacattgtaagtaactggatatag |
46091374 |
T |
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| Q |
101 |
attttctttttcttttcccatactattgctttttgattgcttccatgattaggcactaacgaaaaattcttgggatcacttcacaaacaaaatcatgcat |
200 |
Q |
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| T |
46091373 |
attttctttttcttttcccatactattgttttttgattgcttccatgattaggcactaacgaaaaattcttgggatcacttcacaaacaaaatcatgcat |
46091274 |
T |
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| Q |
201 |
aaaaagcaatgattggaacaatcttaacttaacctttggacagaatactgaaattttgttgaattaaaatagcatgttgatgaaggaaaactaactaaaa |
300 |
Q |
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| T |
46091273 |
aaaaagcaatgattggaacaatcttaacttaacctttggacagaatactgaaattttgttgaattaaaatagcatgttgatgaaggaaaactaactaaaa |
46091174 |
T |
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| Q |
301 |
acaggtgggaaa |
312 |
Q |
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| T |
46091173 |
acaggtgggaaa |
46091162 |
T |
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