View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20261_high_7 (Length: 570)

Name: NF20261_high_7
Description: NF20261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20261_high_7
NF20261_high_7
[»] chr2 (4 HSPs)
chr2 (8-533)||(43412682-43413210)
chr2 (113-195)||(929010-929092)
chr2 (129-251)||(34504177-34504300)
chr2 (205-253)||(22651102-22651150)
[»] chr7 (5 HSPs)
chr7 (113-195)||(32854239-32854321)
chr7 (129-192)||(48723328-48723391)
chr7 (131-195)||(29724368-29724432)
chr7 (138-251)||(42121329-42121442)
chr7 (113-195)||(33645263-33645349)
[»] chr3 (8 HSPs)
chr3 (128-251)||(48855510-48855633)
chr3 (112-251)||(53683921-53684061)
chr3 (129-195)||(54362031-54362097)
chr3 (132-251)||(37311647-37311766)
chr3 (130-182)||(32737826-32737878)
chr3 (209-252)||(53436172-53436215)
chr3 (153-195)||(34408058-34408100)
chr3 (135-195)||(43271651-43271711)
[»] chr5 (5 HSPs)
chr5 (137-250)||(141319-141432)
chr5 (131-195)||(6818578-6818642)
chr5 (205-251)||(12289080-12289126)
chr5 (129-195)||(29429610-29429676)
chr5 (109-183)||(6809624-6809698)
[»] chr1 (2 HSPs)
chr1 (110-193)||(31820642-31820724)
chr1 (130-195)||(3150653-3150718)
[»] chr4 (4 HSPs)
chr4 (113-251)||(3527864-3528003)
chr4 (129-195)||(50685593-50685659)
chr4 (130-251)||(8488651-8488772)
chr4 (110-195)||(13901996-13902080)
[»] chr6 (2 HSPs)
chr6 (129-194)||(7509734-7509799)
chr6 (205-251)||(5456575-5456621)
[»] chr8 (1 HSPs)
chr8 (132-186)||(12883128-12883182)


Alignment Details
Target: chr2 (Bit Score: 427; Significance: 0; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 8 - 533
Target Start/End: Original strand, 43412682 - 43413210
Alignment:
Q  8 agattatactatgttagagcaacttagaatgggggaaaaccaaatctagtgttcctcacatatgcgagcgaatatataagcgagaaaatattattttgta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43412682 agattatactatgttagagcaacttagaatgggggaaaaccaaatctagtgttcctcacatatgcgagcgaatatataagtgagaaaatattattttgta 43412781  T
Q  108 ttggaaaatgctaacgtgtatccttaaggcacaagttaattagttaaaagtggaaataatttgttctaa---tcaatgcattagaatttaannnnnnnca 204  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||   ||||| |||||||||||||       ||    
T  43412782 ttggaaaatgctaacgtgtgcccttaaggcacaagttaattagttaaaagtggaaataatttgctcaaaaaatcaatacattagaatttaatttttttca 43412881  T
Q  205 ttttgattaacttaatacacaaaatttaagagaatatttctacttttatttttagattgtttaatatatggcttaaaacataagttagcaaaaccccttt 304  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||    
T  43412882 ttttgattaatttaatacacaaaatttaagagaatgtttctacttttatttttagattgtttaacatatgccttaaaacataagttagcaagaccc-ttt 43412980  T
Q  305 tatatttgattattatagtaaatctctccttgtgagggg-ctaagttgagaagtaaattggttgctatcccttttatgaagatattttagaaactaattt 403  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43412981 tatatttgattattatagtaaatctctccttgtgagggggctaagttgagaagtaaattggttgctatcccttttatgaagatattttagaaactaattt 43413080  T
Q  404 taaagattcaccttataaattgacggttacacgtgtaaaataacactccgtacatcaatttctaacttcaatcatcatacatgttggatattgcatgcac 503  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43413081 taaagagtcgccttataaattgacggttacacgtgtaaaataacactccgtacatcaatttctaacttcaatcatcatacatgttggatattgcatgcac 43413180  T
Q  504 tacgtgttttaagtaatgtttatgtttcat 533  Q
    ||||||||||||||||||||||||||||||    
T  43413181 tacgtgttttaagtaatgtttatgtttcat 43413210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 929010 - 929092
Alignment:
Q  113 aaatgctaacgtgtatccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    ||||| |||| ||| |||||||| ||||||||||  ||| |||||| |||||| |||||| ||||||||||||| ||||||||    
T  929010 aaatgttaacttgtgtccttaagacacaagttaaagagtcaaaagtagaaatattttgttgtaatcaatgcatttgaatttaa 929092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 34504177 - 34504300
Alignment:
Q  129 ccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaannnnnnnca-ttttgattaacttaatacacaaa 227  Q
    ||||||| ||||||||||| | | |||||| ||||||| |||||  |||||||||||| |||||||         | |||| ||||| | ||| ||||||    
T  34504177 ccttaagacacaagttaatgaatcaaaagtagaaataagttgttgcaatcaatgcatttgaatttagttttttttacttttaattaattgaatgcacaaa 34504276  T
Q  228 atttaagagaatatttctactttt 251  Q
    |||||||||||||||| |||||||    
T  34504277 atttaagagaatatttttactttt 34504300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 22651150 - 22651102
Alignment:
Q  205 ttttgattaacttaatacacaaaatttaagagaatatttctacttttat 253  Q
    |||||||||| | ||| || |||||||||||||||||||||| ||||||    
T  22651150 ttttgattaattgaatgcataaaatttaagagaatatttctatttttat 22651102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 32854239 - 32854321
Alignment:
Q  113 aaatgctaacgtgtatccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    |||||||||| |||  ||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  32854239 aaatgctaacctgtgcccttaaaacacaagttaatgagttaaaagtggaaataatttgttctaatcaatgcatttgaaattaa 32854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 48723391 - 48723328
Alignment:
Q  129 ccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatt 192  Q
    ||||||||||||||||||| |||| |||||||||||| |||||| |||| |||||||| |||||    
T  48723391 ccttaaggcacaagttaatgagtttaaagtggaaatattttgttgtaatgaatgcatttgaatt 48723328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 29724432 - 29724368
Alignment:
Q  131 ttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    |||||| |||||| ||| ||| |||||| ||||||||||||| |||| |||||||| ||||||||    
T  29724432 ttaaggtacaagtaaataagtcaaaagtagaaataatttgttgtaataaatgcatttgaatttaa 29724368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 42121329 - 42121442
Alignment:
Q  138 acaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaannnnnnncattttgattaacttaatacacaaaatttaagaga 237  Q
    |||||||||| |||||||| |  |||||||||||| |||| |||||||| ||||||||         |||| ||||| | |||  |||||||||||||||    
T  42121329 acaagttaatgagttaaaaatataaataatttgttgtaattaatgcatttgaatttaattttttcacttttcattaattgaatgtacaaaatttaagaga 42121428  T
Q  238 atatttctactttt 251  Q
    || |||||||||||    
T  42121429 atgtttctactttt 42121442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 33645349 - 33645263
Alignment:
Q  113 aaatgctaacgtgtatccttaaggcacaagttaatt-----agttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    |||||||||| |||  |||||||||||||||||||      ||| |||||||||||||||||||| ||| ||||||||| ||||||||    
T  33645349 aaatgctaacttgtgcccttaaggcacaagttaatgtaatgagtcaaaagtggaaataatttgttgtaa-caatgcatttgaatttaa 33645263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 48855633 - 48855510
Alignment:
Q  128 tccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaannnnnnncattttgattaacttaatacacaaa 227  Q
    |||||||||||||||||||| || ||||||||||||||| ||||| |||| ||| |||| ||||||||         ||| |||||| | ||||||||||    
T  48855633 tccttaaggcacaagttaatgagctaaaagtggaaataaattgttgtaattaattcatttgaatttaattctttaattttagattaattgaatacacaaa 48855534  T
Q  228 atttaagagaatatttctactttt 251  Q
    ||| ||||||||||||||||||||    
T  48855533 attcaagagaatatttctactttt 48855510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 251
Target Start/End: Original strand, 53683921 - 53684061
Alignment:
Q  112 aaaatgctaacgtgtatccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa-nnnnnnncattttga 210  Q
    |||||| |||| |||  ||||||||||||||||||| ||  ||||||| |||||||||||| |||| |||| ||| ||||||||        | ||||||    
T  53683921 aaaatgttaacttgtgcccttaaggcacaagttaatgagccaaaagtgaaaataatttgttttaattaatgtatttgaatttaattttttgactttttga 53684020  T
Q  211 ttaacttaatacacaaaatttaagagaatatttctactttt 251  Q
    |||| | |||||||||||| |||||||||||||||||||||    
T  53684021 ttaattgaatacacaaaatataagagaatatttctactttt 53684061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 54362031 - 54362097
Alignment:
Q  129 ccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    ||||||||||||||||||| ||| |||||| |||||| || ||| ||||||||||||| ||||||||    
T  54362031 ccttaaggcacaagttaatgagtcaaaagtagaaatatttggttgtaatcaatgcatttgaatttaa 54362097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 37311647 - 37311766
Alignment:
Q  132 taaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaannnnnnncattttgattaacttaatacacaaaattt 231  Q
    |||||||||||||||| ||  ||||||  |||||||||||| |||| |||||||| ||||||||         |||||||||| | ||| ||||||||      
T  37311647 taaggcacaagttaatgagacaaaagtataaataatttgttgtaattaatgcatttgaatttaattttttgacttttgattaattgaatgcacaaaatac 37311746  T
Q  232 aagagaatatttctactttt 251  Q
    |||||||| |||||||||||    
T  37311747 aagagaatgtttctactttt 37311766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 32737878 - 32737826
Alignment:
Q  130 cttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatg 182  Q
    |||||||||||||||||| ||| |||| || |||||||||||| |||||||||    
T  32737878 cttaaggcacaagttaatgagtcaaaaatgaaaataatttgttgtaatcaatg 32737826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 53436215 - 53436172
Alignment:
Q  209 gattaacttaatacacaaaatttaagagaatatttctactttta 252  Q
    |||||| | |||||||||||||||||| ||||||||||||||||    
T  53436215 gattaattaaatacacaaaatttaagaaaatatttctactttta 53436172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 34408058 - 34408100
Alignment:
Q  153 aaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    |||||||||||||||||||| |||||||||||||  |||||||    
T  34408058 aaaagtggaaataatttgttgtaatcaatgcatttaaatttaa 34408100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 43271651 - 43271711
Alignment:
Q  135 ggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    ||||||||||||| | | ||||||||||||| | |||| |||| |||||||| ||||||||    
T  43271651 ggcacaagttaatgaatcaaaagtggaaatattctgttgtaataaatgcatttgaatttaa 43271711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 141319 - 141432
Alignment:
Q  137 cacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaannnnnnncattttgattaacttaatacacaaaatttaagag 236  Q
    ||||||||||| || ||||||||||||||| ||||| |||| |||||||| ||||||||         |||||||||| | ||| ||||||||| |||||    
T  141319 cacaagttaatgagctaaaagtggaaataaattgttgtaattaatgcatttgaatttaattctttaacttttgattaattgaatgcacaaaattcaagag 141418  T
Q  237 aatatttctacttt 250  Q
    ||||||||||||||    
T  141419 aatatttctacttt 141432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 6818578 - 6818642
Alignment:
Q  131 ttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    |||| |||||||||||| |||||||| || |||||||||||| ||||||||| ||| ||||||||    
T  6818578 ttaaagcacaagttaatgagttaaaaatgaaaataatttgttgtaatcaatgtatttgaatttaa 6818642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 12289080 - 12289126
Alignment:
Q  205 ttttgattaacttaatacacaaaatttaagagaatatttctactttt 251  Q
    |||||||||| | ||||||||||||| ||||||||||||||||||||    
T  12289080 ttttgattaattgaatacacaaaattcaagagaatatttctactttt 12289126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 29429610 - 29429676
Alignment:
Q  129 ccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    ||||||||||||||||||  ||| ||||||||||||| |||||| |||| ||| |||| ||||||||    
T  29429610 ccttaaggcacaagttaaagagtcaaaagtggaaatattttgttgtaattaatacatttgaatttaa 29429676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 6809624 - 6809698
Alignment:
Q  109 tggaaaatgctaacgtgtatccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgc 183  Q
    ||||||||| |||| ||| || ||||  ||||||||||  ||| |||||||||||||||||||  ||||||||||    
T  6809624 tggaaaatgttaacttgtgtctttaaaacacaagttaaagagtcaaaagtggaaataatttgtcgtaatcaatgc 6809698  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 31820724 - 31820642
Alignment:
Q  110 ggaaaatgctaacgtgtatccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaattt 193  Q
    |||||||| |||| |||  ||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| ||||| ||||||    
T  31820724 ggaaaatgttaacttgtgcccttaaggcgcaagttaataagtcaaaagtggaaataatttgttgtaatcaa-gcatttgaattt 31820642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 3150653 - 3150718
Alignment:
Q  130 cttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    |||||| ||||||||||  ||| |||||||||||||||||||| |||| ||| |||| ||||||||    
T  3150653 cttaagacacaagttaacaagtcaaaagtggaaataatttgttgtaattaatacatttgaatttaa 3150718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 3527864 - 3528003
Alignment:
Q  113 aaatgctaacgtgtatccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaannnnnnnca-ttttgat 211  Q
    ||||| |||| ||| |||||||| ||||||| ||| |||  ||||| |||||| |||||| ||||||||||||| ||||||||        | |||||||    
T  3527864 aaatgttaacatgtgtccttaagacacaagtcaataagtccaaagtagaaatattttgttgtaatcaatgcatttgaatttaatttattttatttttgat 3527963  T
Q  212 taacttaatacacaaaatttaagagaatatttctactttt 251  Q
    ||| | ||| |||||||| ||||||||| |||||||||||    
T  3527964 taattgaatgcacaaaatataagagaatgtttctactttt 3528003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 50685593 - 50685659
Alignment:
Q  129 ccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    ||||||||||||||||||| ||  |||||||||||||||||||| |||| |||| ||| ||||||||    
T  50685593 ccttaaggcacaagttaatgagccaaaagtggaaataatttgttgtaataaatgtatttgaatttaa 50685659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 8488772 - 8488651
Alignment:
Q  130 cttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaannnnnnncattttgattaacttaatacacaaaat 229  Q
    ||||| |||||||||||| || |||||  |||||||||||| | |||| |||||||| ||||||||         |||||||||| | ||||||||||||    
T  8488772 cttaaagcacaagttaatgagctaaaaaaggaaataatttggtgtaattaatgcatttgaatttaattttttgacttttgattaattgaatacacaaaat 8488673  T
Q  230 ttaagagaatatttctactttt 251  Q
      |||||||| |||||||||||    
T  8488672 acaagagaatgtttctactttt 8488651  T

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Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 13901996 - 13902080
Alignment:
Q  110 ggaaaatgctaacgtgtatccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaatttaa 195  Q
    |||||||| |||| |||| | |||||||| ||| |||| ||| |||||| |||||| || ||| ||||||||||||| ||||||||    
T  13901996 ggaaaatgttaacttgtacctttaaggca-aaggtaatgagtcaaaagtagaaatatttggttgtaatcaatgcatttgaatttaa 13902080  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 7509799 - 7509734
Alignment:
Q  129 ccttaaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcattagaattta 194  Q
    ||||||||||||||||||| ||| |||||| |||||| | |||| ||||||||||||| |||||||    
T  7509799 ccttaaggcacaagttaatgagtcaaaagtagaaatattgtgttgtaatcaatgcatttgaattta 7509734  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 5456621 - 5456575
Alignment:
Q  205 ttttgattaacttaatacacaaaatttaagagaatatttctactttt 251  Q
    |||||||||| | ||||||||||||| ||||||||||||||| ||||    
T  5456621 ttttgattaattgaatacacaaaattcaagagaatatttctattttt 5456575  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 12883182 - 12883128
Alignment:
Q  132 taaggcacaagttaattagttaaaagtggaaataatttgttctaatcaatgcatt 186  Q
    |||||||||||||||| ||||| ||||| |||||||||||| |||| ||||||||    
T  12883182 taaggcacaagttaatgagttataagtgaaaataatttgttgtaattaatgcatt 12883128  T

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