View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20261_low_13 (Length: 404)
Name: NF20261_low_13
Description: NF20261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20261_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 16 - 388
Target Start/End: Complemental strand, 33263588 - 33263216
Alignment:
| Q |
16 |
atcaacaaaaatcattgatattgaaccattaaaagtgccaaaacaagtttttcatgttccaattcaatttgaacctattattgaaaaggttccaaatgaa |
115 |
Q |
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| T |
33263588 |
atcaacaaaaatcattgatattgaaccattaaaagtgccaaaacaagtttttcatgttccaattcaatttgaacctattattgacaaggttccaaatgaa |
33263489 |
T |
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| Q |
116 |
gggttggtgaaagaaaacactgaaaaaatcaaagtccctcagatagaggaagctgatcaagagagtgtttcacaagttttctttcatataaaagagaaca |
215 |
Q |
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| T |
33263488 |
gggttggtgaaagaaaacactgaaaaaatcaaagtccctcagatagaggaagctgatcaagagagtgtttcacaagttttctttcatataaaagagaaca |
33263389 |
T |
|
| Q |
216 |
aatttgttgacatgaaattggagtcaccaaaatctagtagtggtagaggattattttctccacttgatgcagacatggagatgatgacatctcctagaat |
315 |
Q |
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| T |
33263388 |
aatttgttgacatgaaattggagtcaccaaaatctagtagtggtagaggattattttctccacttgatgcagacatggagatgatgacatctcctagaat |
33263289 |
T |
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| Q |
316 |
gaagaacatggagaatgaaaaggttgacatgtactatgatgagaaagaaggagaggacatgaatggtggtttt |
388 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33263288 |
gaagaacatggagaatgaaaaggttgacatgtactatgatgagaaagaaggagaggacatgaatggtggtttt |
33263216 |
T |
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