View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20261_low_49 (Length: 250)
Name: NF20261_low_49
Description: NF20261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20261_low_49 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 12984777 - 12984545
Alignment:
| Q |
11 |
cataggttgagtacatttcaacactactactgtagtctagtttaggaaaacttactagtactatatgtaaagattctgtgtcagttttatctggttaaat |
110 |
Q |
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| T |
12984777 |
cataggttgagtacatttcaacactacttctatagtctagtttaggaaaacttactagtactatatgtaaagattctgtgtcagttttatctggttaaat |
12984678 |
T |
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| Q |
111 |
aatggaattaattatttggtggtaaaccataattggctccccaaaagcttcttcacattgagatgatactcgtactatgttaagatgcttatctttcaag |
210 |
Q |
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| T |
12984677 |
aatggaattaattatttggtggtaaaccataattggctccccaaaagcttcttcacattgagatgatactagtactatgttaagatgcttatctttc--- |
12984581 |
T |
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| Q |
211 |
tttgaatcacccttattggttcaagtggaattaattattc |
250 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
12984580 |
----aatcacccttattggttcaagtggaattaattattc |
12984545 |
T |
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