View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20262_high_106 (Length: 261)
Name: NF20262_high_106
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20262_high_106 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 21428410 - 21428644
Alignment:
| Q |
10 |
ataatactgatgtttcaaattagcttagcacctcccttactccc-aaacaagaaaaaacagtgaagaaaaaggaagattagaagaataaatacatgtcct |
108 |
Q |
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| T |
21428410 |
ataatattgatgtttcaaattagcttagcacctcccttactccccaaacaagaaaaaacagtgaagaaaaaggaagattagaagaataaatacatgtcct |
21428509 |
T |
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| Q |
109 |
aattcaacttttcaaataacaaataggacttatgctattttggctaaaagtaacattaaagaccaagaagaaaactaatcgttaaattagttgttcaaag |
208 |
Q |
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| T |
21428510 |
aattcaacttttcaaataacaaataggacttatgctattttggctaaaagtaacattaaagaccaagaagaaaagtaatcgttaaattagttgttcaaag |
21428609 |
T |
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| Q |
209 |
aatgattgaataaatgatcaagtaatttcaataac |
243 |
Q |
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| T |
21428610 |
attgattgaataaatgatcaagtaatttcaataac |
21428644 |
T |
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