View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20262_high_118 (Length: 247)

Name: NF20262_high_118
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20262_high_118
NF20262_high_118
[»] chr8 (41 HSPs)
chr8 (134-202)||(22878038-22878106)
chr8 (135-202)||(32099502-32099569)
chr8 (133-202)||(11298154-11298223)
chr8 (135-202)||(24652234-24652301)
chr8 (135-194)||(40223204-40223263)
chr8 (132-202)||(36590099-36590169)
chr8 (135-201)||(37587833-37587899)
chr8 (134-202)||(28709272-28709340)
chr8 (134-202)||(28716629-28716697)
chr8 (135-202)||(16831500-16831567)
chr8 (128-195)||(37560649-37560716)
chr8 (1-71)||(2964120-2964190)
chr8 (4-66)||(45521215-45521277)
chr8 (4-71)||(583859-583926)
chr8 (4-66)||(15884557-15884619)
chr8 (1-71)||(27975935-27976005)
chr8 (1-71)||(28033204-28033274)
chr8 (4-66)||(43032948-43033010)
chr8 (132-197)||(40045363-40045428)
chr8 (134-202)||(17081619-17081687)
chr8 (133-201)||(23676835-23676903)
chr8 (135-202)||(34395461-34395528)
chr8 (135-202)||(42142848-42142915)
chr8 (131-201)||(1893956-1894026)
chr8 (4-66)||(4479297-4479359)
chr8 (132-202)||(31478039-31478109)
chr8 (132-202)||(38171540-38171610)
chr8 (4-66)||(43027352-43027414)
chr8 (1-63)||(44893282-44893344)
chr8 (4-61)||(24938568-24938625)
chr8 (134-170)||(7378820-7378856)
chr8 (138-201)||(17115507-17115570)
chr8 (135-201)||(6338284-6338350)
chr8 (1-63)||(11785959-11786021)
chr8 (135-201)||(16422796-16422861)
chr8 (1-43)||(33401823-33401865)
chr8 (132-190)||(43276903-43276961)
chr8 (133-202)||(11741206-11741275)
chr8 (130-202)||(31581655-31581727)
chr8 (132-172)||(31688179-31688219)
chr8 (136-172)||(40551788-40551824)
[»] chr2 (52 HSPs)
chr2 (133-202)||(26911474-26911543)
chr2 (135-202)||(6153558-6153625)
chr2 (4-71)||(3811687-3811754)
chr2 (1-66)||(41031907-41031972)
chr2 (131-202)||(5039735-5039806)
chr2 (4-71)||(20116608-20116675)
chr2 (5-72)||(34722724-34722791)
chr2 (136-202)||(6232390-6232456)
chr2 (132-202)||(8339940-8340010)
chr2 (132-202)||(16486844-16486913)
chr2 (135-202)||(3377357-3377423)
chr2 (132-195)||(6760721-6760784)
chr2 (4-71)||(10823103-10823170)
chr2 (135-202)||(21865210-21865277)
chr2 (4-71)||(22593177-22593243)
chr2 (1-71)||(7747314-7747384)
chr2 (132-202)||(9886954-9887023)
chr2 (132-202)||(18212081-18212151)
chr2 (4-66)||(25540405-25540467)
chr2 (1-71)||(34346283-34346353)
chr2 (4-66)||(38962806-38962868)
chr2 (1-66)||(16325635-16325700)
chr2 (1-62)||(39201513-39201574)
chr2 (1-66)||(44773303-44773368)
chr2 (134-202)||(2546434-2546502)
chr2 (138-202)||(4453633-4453697)
chr2 (134-202)||(18710154-18710221)
chr2 (135-202)||(650890-650956)
chr2 (4-71)||(8410174-8410241)
chr2 (4-51)||(10026632-10026679)
chr2 (4-51)||(10046493-10046540)
chr2 (4-71)||(12455353-12455420)
chr2 (4-59)||(13026419-13026474)
chr2 (135-202)||(13111853-13111920)
chr2 (4-51)||(28525471-28525518)
chr2 (4-51)||(37560216-37560263)
chr2 (4-71)||(38005445-38005512)
chr2 (4-71)||(44945636-44945703)
chr2 (4-50)||(331544-331590)
chr2 (4-66)||(21641993-21642055)
chr2 (4-66)||(28616380-28616442)
chr2 (153-202)||(13528014-13528063)
chr2 (1-66)||(35946778-35946843)
chr2 (138-195)||(44275630-44275687)
chr2 (158-202)||(4385635-4385679)
chr2 (154-202)||(8815196-8815244)
chr2 (147-195)||(13564527-13564575)
chr2 (10-66)||(18902531-18902587)
chr2 (3-51)||(31088376-31088424)
chr2 (134-202)||(36999453-36999520)
chr2 (130-202)||(38579118-38579190)
chr2 (134-202)||(40025052-40025120)
[»] chr3 (64 HSPs)
chr3 (132-202)||(42465145-42465215)
chr3 (133-202)||(48378191-48378260)
chr3 (1-71)||(15320226-15320296)
chr3 (133-202)||(33391868-33391937)
chr3 (130-202)||(41785771-41785843)
chr3 (4-71)||(47219187-47219254)
chr3 (3-71)||(28572208-28572276)
chr3 (130-202)||(49853161-49853233)
chr3 (130-202)||(51950318-51950390)
chr3 (4-71)||(29127962-29128029)
chr3 (142-201)||(46318879-46318938)
chr3 (132-195)||(52166215-52166278)
chr3 (1-71)||(26361964-26362034)
chr3 (134-195)||(45368576-45368637)
chr3 (134-202)||(26540926-26540994)
chr3 (136-172)||(41246231-41246267)
chr3 (4-71)||(26043855-26043922)
chr3 (4-71)||(43330729-43330796)
chr3 (135-202)||(45693524-45693591)
chr3 (4-71)||(49021200-49021267)
chr3 (4-66)||(3507535-3507597)
chr3 (4-66)||(23511610-23511672)
chr3 (1-51)||(30767264-30767314)
chr3 (1-51)||(33251702-33251752)
chr3 (1-66)||(13367464-13367529)
chr3 (133-202)||(16127257-16127326)
chr3 (153-202)||(24536807-24536856)
chr3 (140-201)||(35100160-35100220)
chr3 (133-202)||(35499567-35499635)
chr3 (5-66)||(45877498-45877559)
chr3 (134-195)||(52857862-52857923)
chr3 (138-202)||(29081399-29081463)
chr3 (130-202)||(37088246-37088318)
chr3 (131-195)||(41518324-41518388)
chr3 (134-202)||(44545197-44545264)
chr3 (135-195)||(46972000-46972060)
chr3 (4-51)||(2029284-2029331)
chr3 (135-190)||(2121795-2121850)
chr3 (4-71)||(3136691-3136758)
chr3 (135-202)||(8872840-8872907)
chr3 (152-195)||(21707135-21707178)
chr3 (12-71)||(36043671-36043730)
chr3 (135-202)||(38185738-38185804)
chr3 (4-63)||(44064587-44064646)
chr3 (134-201)||(50499729-50499795)
chr3 (1-71)||(7310700-7310770)
chr3 (4-66)||(7328887-7328948)
chr3 (132-202)||(19948436-19948506)
chr3 (4-66)||(35315999-35316061)
chr3 (1-39)||(39849111-39849149)
chr3 (134-176)||(42496967-42497009)
chr3 (132-202)||(45345126-45345195)
chr3 (155-201)||(47173555-47173601)
chr3 (4-66)||(54261269-54261331)
chr3 (5-63)||(55069684-55069742)
chr3 (153-202)||(24536672-24536721)
chr3 (1-30)||(26207839-26207868)
chr3 (10-66)||(7650276-7650332)
chr3 (135-191)||(12063857-12063913)
chr3 (130-202)||(40563481-40563553)
chr3 (4-44)||(41630536-41630576)
chr3 (134-202)||(44845590-44845658)
chr3 (134-202)||(46248082-46248149)
chr3 (10-66)||(53649776-53649832)
[»] chr7 (44 HSPs)
chr7 (129-202)||(32168794-32168867)
chr7 (132-230)||(40258821-40258919)
chr7 (134-202)||(21313912-21313980)
chr7 (135-202)||(17192562-17192629)
chr7 (4-66)||(38578868-38578930)
chr7 (4-66)||(3353470-3353532)
chr7 (1-71)||(22993363-22993433)
chr7 (140-202)||(44743689-44743751)
chr7 (1-65)||(14535334-14535398)
chr7 (130-202)||(21741933-21742005)
chr7 (4-63)||(13095904-13095963)
chr7 (133-176)||(40106145-40106188)
chr7 (4-71)||(42210258-42210325)
chr7 (132-195)||(43134369-43134432)
chr7 (4-71)||(48551903-48551970)
chr7 (1-71)||(5069811-5069881)
chr7 (4-50)||(19914720-19914766)
chr7 (1-71)||(22974010-22974080)
chr7 (132-202)||(42375903-42375972)
chr7 (130-192)||(46879656-46879718)
chr7 (132-202)||(47471083-47471152)
chr7 (4-66)||(48804729-48804791)
chr7 (134-195)||(483110-483170)
chr7 (133-202)||(21254818-21254886)
chr7 (133-202)||(40637281-40637350)
chr7 (134-202)||(36436120-36436188)
chr7 (1-52)||(36619269-36619320)
chr7 (4-71)||(43861968-43862035)
chr7 (4-63)||(45960007-45960066)
chr7 (5-71)||(1605988-1606054)
chr7 (5-51)||(4228770-4228816)
chr7 (4-66)||(8734687-8734749)
chr7 (4-66)||(27028325-27028387)
chr7 (122-192)||(36407182-36407252)
chr7 (132-202)||(42587504-42587573)
chr7 (5-51)||(49142685-49142731)
chr7 (134-195)||(19757644-19757705)
chr7 (136-165)||(21316735-21316764)
chr7 (135-172)||(38531327-38531364)
chr7 (140-172)||(1342755-1342787)
chr7 (14-66)||(34127646-34127698)
chr7 (130-202)||(36246497-36246568)
chr7 (7-63)||(39420886-39420942)
chr7 (7-71)||(48244352-48244416)
[»] chr5 (45 HSPs)
chr5 (133-202)||(25872312-25872381)
chr5 (130-172)||(5521273-5521315)
chr5 (1-71)||(9812913-9812983)
chr5 (1-71)||(12705055-12705125)
chr5 (1-71)||(12766172-12766242)
chr5 (130-195)||(1174745-1174810)
chr5 (134-202)||(36685781-36685849)
chr5 (4-71)||(42086371-42086438)
chr5 (4-66)||(14728127-14728189)
chr5 (5-63)||(39099783-39099841)
chr5 (134-199)||(10697234-10697299)
chr5 (133-202)||(12713276-12713345)
chr5 (133-202)||(12774540-12774609)
chr5 (4-71)||(1538475-1538542)
chr5 (4-71)||(9805048-9805115)
chr5 (132-202)||(4221577-4221646)
chr5 (8-66)||(28857194-28857252)
chr5 (135-201)||(32382815-32382881)
chr5 (134-172)||(36028111-36028149)
chr5 (4-66)||(38369743-38369805)
chr5 (145-202)||(6893482-6893539)
chr5 (1-66)||(7866622-7866687)
chr5 (133-202)||(14647461-14647529)
chr5 (134-195)||(30774303-30774364)
chr5 (5-66)||(42291506-42291567)
chr5 (130-202)||(1711307-1711379)
chr5 (137-201)||(3669509-3669573)
chr5 (134-202)||(5591554-5591621)
chr5 (5-61)||(7308370-7308426)
chr5 (3-59)||(14235722-14235778)
chr5 (134-202)||(39744646-39744713)
chr5 (135-202)||(2236620-2236687)
chr5 (135-202)||(13228576-13228643)
chr5 (136-195)||(35236779-35236838)
chr5 (4-71)||(42861214-42861281)
chr5 (4-66)||(2485240-2485302)
chr5 (4-50)||(11845818-11845864)
chr5 (4-66)||(20525882-20525944)
chr5 (5-66)||(8513564-8513625)
chr5 (13-66)||(28857002-28857055)
chr5 (155-195)||(11664002-11664042)
chr5 (4-44)||(14588640-14588680)
chr5 (134-202)||(30412716-30412784)
chr5 (134-202)||(39275389-39275456)
chr5 (130-202)||(41826357-41826429)
[»] chr6 (32 HSPs)
chr6 (4-71)||(8932708-8932775)
chr6 (4-71)||(8944174-8944241)
chr6 (134-202)||(29415024-29415092)
chr6 (136-194)||(3636761-3636819)
chr6 (4-66)||(5253224-5253286)
chr6 (1-71)||(8611970-8612040)
chr6 (4-71)||(9633621-9633688)
chr6 (130-172)||(3108143-3108185)
chr6 (1-71)||(14783416-14783486)
chr6 (131-171)||(15591288-15591328)
chr6 (4-71)||(30788849-30788916)
chr6 (5-71)||(6606093-6606159)
chr6 (135-201)||(14227649-14227715)
chr6 (5-51)||(17114913-17114959)
chr6 (134-172)||(33540855-33540893)
chr6 (130-202)||(1806428-1806499)
chr6 (132-192)||(7317734-7317794)
chr6 (138-202)||(32731728-32731792)
chr6 (134-202)||(34903925-34903993)
chr6 (4-63)||(2271307-2271366)
chr6 (4-71)||(5029864-5029931)
chr6 (133-172)||(7292678-7292717)
chr6 (11-66)||(8938765-8938820)
chr6 (135-202)||(12297331-12297398)
chr6 (4-71)||(19089545-19089612)
chr6 (4-71)||(21898695-21898762)
chr6 (135-202)||(31452067-31452134)
chr6 (135-169)||(5681500-5681534)
chr6 (4-66)||(29333140-29333202)
chr6 (138-202)||(31100128-31100192)
chr6 (4-44)||(12606477-12606517)
chr6 (138-202)||(34233028-34233092)
[»] chr4 (55 HSPs)
chr4 (132-201)||(19169165-19169234)
chr4 (135-202)||(29656652-29656719)
chr4 (134-202)||(31338616-31338684)
chr4 (132-202)||(4517305-4517375)
chr4 (4-66)||(7246647-7246709)
chr4 (134-202)||(12234081-12234149)
chr4 (135-230)||(11600646-11600741)
chr4 (4-66)||(24166498-24166560)
chr4 (4-66)||(40780862-40780924)
chr4 (134-195)||(55764522-55764583)
chr4 (134-202)||(47417589-47417657)
chr4 (140-191)||(15635910-15635961)
chr4 (130-201)||(26443283-26443354)
chr4 (135-202)||(35777500-35777567)
chr4 (132-202)||(8829929-8829999)
chr4 (135-230)||(9043697-9043791)
chr4 (4-66)||(17080091-17080153)
chr4 (4-66)||(38166075-38166137)
chr4 (133-195)||(45520069-45520131)
chr4 (4-66)||(55921082-55921144)
chr4 (4-65)||(1940779-1940840)
chr4 (133-202)||(18582806-18582874)
chr4 (133-202)||(42116857-42116926)
chr4 (134-195)||(55828966-55829027)
chr4 (134-202)||(7706334-7706402)
chr4 (134-202)||(22038471-22038539)
chr4 (4-51)||(5472864-5472911)
chr4 (135-202)||(8941868-8941934)
chr4 (4-71)||(14858758-14858825)
chr4 (135-202)||(28307218-28307285)
chr4 (4-71)||(36145211-36145278)
chr4 (135-202)||(45780851-45780918)
chr4 (135-202)||(53273081-53273148)
chr4 (135-202)||(53407153-53407219)
chr4 (135-202)||(56372399-56372465)
chr4 (4-66)||(2559355-2559417)
chr4 (4-62)||(8889070-8889128)
chr4 (4-66)||(29895835-29895897)
chr4 (135-169)||(30366293-30366327)
chr4 (5-71)||(36262763-36262829)
chr4 (134-172)||(55684665-55684702)
chr4 (135-172)||(4391845-4391882)
chr4 (5-66)||(6032644-6032705)
chr4 (1-66)||(10541061-10541125)
chr4 (5-66)||(16450349-16450410)
chr4 (1-66)||(16645163-16645228)
chr4 (5-66)||(47682383-47682444)
chr4 (1-50)||(48317292-48317341)
chr4 (135-172)||(53224214-53224251)
chr4 (4-44)||(20532432-20532472)
chr4 (155-195)||(22892511-22892551)
chr4 (155-195)||(22944175-22944215)
chr4 (4-40)||(24850654-24850690)
chr4 (132-172)||(35190753-35190792)
chr4 (4-60)||(54946297-54946353)
[»] scaffold0197 (1 HSPs)
scaffold0197 (134-202)||(28198-28266)
[»] chr1 (57 HSPs)
chr1 (135-202)||(1507842-1507909)
chr1 (140-202)||(3660920-3660982)
chr1 (136-202)||(36043399-36043465)
chr1 (5-66)||(10172973-10173034)
chr1 (134-202)||(7024812-7024880)
chr1 (133-201)||(15348792-15348860)
chr1 (1-63)||(30927732-30927794)
chr1 (1-71)||(34697376-34697446)
chr1 (5-66)||(5504076-5504137)
chr1 (135-195)||(34319359-34319419)
chr1 (130-202)||(44909806-44909877)
chr1 (134-202)||(47134629-47134696)
chr1 (135-202)||(17046699-17046766)
chr1 (132-202)||(2479128-2479197)
chr1 (4-66)||(16956510-16956572)
chr1 (4-66)||(26325856-26325918)
chr1 (4-66)||(26660182-26660243)
chr1 (135-201)||(30774056-30774121)
chr1 (132-202)||(36301202-36301271)
chr1 (4-48)||(10336560-10336604)
chr1 (134-202)||(13121682-13121749)
chr1 (134-202)||(31150523-31150590)
chr1 (4-48)||(33498859-33498903)
chr1 (130-194)||(33524493-33524557)
chr1 (4-71)||(8764035-8764102)
chr1 (4-51)||(14254285-14254332)
chr1 (4-71)||(17642001-17642068)
chr1 (151-202)||(25601972-25602023)
chr1 (135-202)||(30721722-30721789)
chr1 (135-202)||(36838793-36838860)
chr1 (4-71)||(37339864-37339931)
chr1 (4-71)||(41663853-41663920)
chr1 (4-71)||(43959818-43959885)
chr1 (15-66)||(51437512-51437563)
chr1 (4-66)||(4581684-4581746)
chr1 (4-66)||(6899602-6899664)
chr1 (4-66)||(9659181-9659243)
chr1 (4-66)||(10422832-10422894)
chr1 (1-71)||(18915908-18915978)
chr1 (151-201)||(26204260-26204310)
chr1 (4-66)||(32142848-32142910)
chr1 (4-66)||(33004017-33004079)
chr1 (20-66)||(34878626-34878672)
chr1 (144-194)||(42614245-42614295)
chr1 (4-61)||(25165444-25165501)
chr1 (1-50)||(50952274-50952323)
chr1 (135-192)||(51423093-51423150)
chr1 (134-202)||(7711052-7711120)
chr1 (6-66)||(11397891-11397951)
chr1 (1-65)||(17092480-17092544)
chr1 (138-202)||(19899006-19899070)
chr1 (134-202)||(26843720-26843788)
chr1 (4-40)||(28324608-28324644)
chr1 (134-202)||(29586128-29586195)
chr1 (134-202)||(39826569-39826637)
chr1 (134-202)||(42064415-42064482)
chr1 (4-36)||(48798102-48798134)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-66)||(12713-12778)
[»] scaffold0209 (1 HSPs)
scaffold0209 (4-71)||(12619-12686)
[»] scaffold0291 (1 HSPs)
scaffold0291 (4-66)||(6901-6963)
[»] scaffold0011 (1 HSPs)
scaffold0011 (135-177)||(63824-63866)
[»] scaffold0009 (1 HSPs)
scaffold0009 (4-66)||(42833-42895)
[»] scaffold1632 (1 HSPs)
scaffold1632 (131-195)||(157-221)
[»] scaffold0075 (1 HSPs)
scaffold0075 (134-202)||(27248-27316)
[»] scaffold0010 (2 HSPs)
scaffold0010 (4-71)||(155707-155774)
scaffold0010 (4-66)||(25785-25847)
[»] scaffold0031 (1 HSPs)
scaffold0031 (133-202)||(126873-126941)
[»] scaffold0027 (1 HSPs)
scaffold0027 (133-202)||(41858-41926)
[»] scaffold0006 (1 HSPs)
scaffold0006 (4-65)||(68560-68621)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-66)||(613-678)
[»] scaffold0116 (1 HSPs)
scaffold0116 (134-202)||(22560-22628)
[»] scaffold0122 (1 HSPs)
scaffold0122 (134-201)||(12831-12898)
[»] scaffold0316 (1 HSPs)
scaffold0316 (4-66)||(1615-1677)
[»] scaffold0170 (1 HSPs)
scaffold0170 (4-58)||(9891-9945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-71)||(41087-41157)


Alignment Details
Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 22878106 - 22878038
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  22878106 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttatagcttataagctcgtttgac 22878038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 32099502 - 32099569
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  32099502 gggtctgtttggtaacacccaaaaaagagcttatagctcttagcttatagcttataagctcgtttgac 32099569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 11298223 - 11298154
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||| ||||||    
T  11298223 tagggtctgtttggtaacacccaaaaaagaggttatagctcttagcttatagcttataagctcgtttgac 11298154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 24652234 - 24652301
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||| ||||||    
T  24652234 gggtctgtttggtaacacccaaaaaagagcttttacctcttatcttatagcttataagctcgtttgac 24652301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 40223263 - 40223204
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagct 194  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  40223263 gggtctgtttggtaacacccaaaaaagagcttttagctcttagcttatagcttataagct 40223204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 36590099 - 36590169
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||||| ||| ||||||    
T  36590099 ttaggatctgtttggtaacacccaaaaaagagcttttagctcttaatttatagcttataaactcgtttgac 36590169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 37587899 - 37587833
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||| |||||    
T  37587899 gggtctgtttggtaacacccaaaaaagagtttttagctcttagcttatagcttataagctcgtttga 37587833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 28709272 - 28709340
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || |||||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  28709272 agggtctgtttgggaaaacccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 28709340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 28716629 - 28716697
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || |||||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  28716629 agggtctgtttgggaaaacccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 28716697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 16831500 - 16831567
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||| ||||||||||| || ||||||    
T  16831500 gggtctgtttggtaacaccaaaaaaagagtttttagctcttaacttatagcttataagttcgtttgac 16831567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 37560716 - 37560649
Alignment:
Q  128 tgacttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||||||||||   | |||||||||||| ||||||||||||| ||||||||||||||    
T  37560716 tgacttagggtctgtttggtaaactcaaaaaaagagcttttagctcttaacttatagcttataagctc 37560649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2964120 - 2964190
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||| || |||||||| || |||||||||| |||||||| |||||||||||| ||||    
T  2964120 tgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcca 2964190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 45521215 - 45521277
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||| | ||||||||||||    
T  45521215 gcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaa 45521277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 583859 - 583926
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||| ||||||| || |||||||||||||| | || |||||||||||| ||||    
T  583859 gcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaagcca 583926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 15884619 - 15884557
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||||||||||| || |||||||||| |||||| | ||||||||||||    
T  15884619 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 15884557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27975935 - 27976005
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||| |||||||||||| || |||||||||  |||||||| ||||| |||||| ||||    
T  27975935 tgtgcatgcctctacgcttgagccggattaatcgcccacctttagtgggtcaggaaccgatgcgaaagcca 27976005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28033204 - 28033274
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||| |||||||||||| || |||||||||  |||||||| ||||| |||||| ||||    
T  28033204 tgtgcatgcctctacgcttgagccggattaatcgcccacctttagtgggtcaggaaccgatgcgaaagcca 28033274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 43032948 - 43033010
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||| || ||||||||||| || |||||||||| |||||||| ||||||||||||    
T  43032948 gcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaa 43033010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 40045363 - 40045428
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcat 197  Q
    |||||||||||||||||| |||  |||| |||||||||| || |||||| ||||||||||||||||    
T  40045363 ttagggtctgtttggtaagaccagaaaatgagcttatagttcataacttatagcttataagctcat 40045428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 17081619 - 17081687
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  17081619 agggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 17081687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 23676835 - 23676903
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  23676835 tagggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttga 23676903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 34395528 - 34395461
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||  |  |||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  34395528 gggtctgtttggtaaaccttaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 34395461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 42142915 - 42142848
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| |  | ||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  42142915 gggtctgtttggttaacctcaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 42142848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 1894026 - 1893956
Alignment:
Q  131 cttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    |||||||||||||||| ||  || |||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  1894026 cttagggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttga 1893956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 4479359 - 4479297
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||| |||||| ||  ||||||||| |||||| | ||||||||||||    
T  4479359 gcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 4479297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 31478039 - 31478109
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| |  ||||||| ||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  31478039 ttagggtctgtttggttaaccccaaaagagagcttttagcttttagcttatagcttataagctcgtttgac 31478109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 38171610 - 38171540
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| ||  ||||||||||||||| ||||| |||  || |||||||||||||| ||||||    
T  38171610 ttagggtctgtttgggaaaccccaaaaaagagcttttagcttttagtttatagcttataagctcgtttgac 38171540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 43027352 - 43027414
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||  ||| |||||||||||| | ||||| ||||||    
T  43027352 gcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaa 43027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44893344 - 44893282
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    |||||||||||||||||| ||||||||||| || | |||| |||||||||| | |||||||||    
T  44893344 tgtgcatgcctctacgcacgagccggattaatcgctcacccttgatgggtcggaaaccggtgc 44893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 24938625 - 24938568
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggt 61  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||| || | |||||||    
T  24938625 gcatgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaaccggt 24938568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 7378820 - 7378856
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatag 170  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7378820 agggtctgtttggtaacacacaaaaaagagcttatag 7378856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 17115507 - 17115570
Alignment:
Q  138 tctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    |||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  17115507 tctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttga 17115570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 6338284 - 6338350
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||| |  ||||||||||||||| |||||  || ||| |||||||||||||| |||||    
T  6338284 gggtctgtttggttaaccccaaaaaagagcttttagcttctagcttatagcttataagctcgtttga 6338350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11785959 - 11786021
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    |||||||||||||||||||||||| ||||| || | || ||||||||| || | |||||||||    
T  11785959 tgtgcatgcctctacgcatgagccagattaatcgctcatctttgatggatcggaaaccggtgc 11786021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 16422796 - 16422861
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||| | |||||||||||||||| ||||| ||| ||| |||| ||||||||| |||||    
T  16422796 gggtctgtttggtta-acccaaaaaagagcttttagcttttagcttatagcctataagctcgtttga 16422861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33401865 - 33401823
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccaccttt 43  Q
    |||||||||||||||||||||| ||||||| || |||||||||    
T  33401865 tgtgcatgcctctacgcatgagtcggattagtcgcccaccttt 33401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 43276961 - 43276903
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttata 190  Q
    |||||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||    
T  43276961 ttagggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttata 43276903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 11741275 - 11741206
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| |  | ||||||||||||| ||||| |||  || |||||||||||||| ||||||    
T  11741275 tagggtctgtttggttaatctcaaaaaagagcttttagcttttagtttatagcttataagctcgtttgac 11741206  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 31581655 - 31581727
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||| |||||||||| |  |  |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  31581655 acttaggctctgtttggttatccaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 31581727  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 31688219 - 31688179
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||||| |  |||||||||||||||||||||    
T  31688219 ttagggtctgtttggttaaccccaaaaaagagcttatagct 31688179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 40551788 - 40551824
Alignment:
Q  136 ggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  40551788 ggtctgtttagtaacatccaaaaaagagcttatagct 40551824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 26911474 - 26911543
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  26911474 tagggtctgtttggtaacacccaaaaaagagcttttagctcttaacttatagcttataagctcgtttgac 26911543  T

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Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 6153625 - 6153558
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||||| ||||||    
T  6153625 gggtctgtttggtaacatccaaaaaagagcttttagctcttagcttatagcttataagctcgtttgac 6153558  T

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Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 3811754 - 3811687
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||| ||||| |||||| ||||    
T  3811754 gcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaagcca 3811687  T

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Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41031972 - 41031907
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||||| | |||| |||||||    
T  41031972 tgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaa 41031907  T

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Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 5039735 - 5039806
Alignment:
Q  131 cttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| ||  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  5039735 cttagggtctgtttgggaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 5039806  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 20116675 - 20116608
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||||||||||  |  |||||||||||||||| | |||||||||||| ||||    
T  20116675 gcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaagcca 20116608  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 34722724 - 34722791
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgccac 72  Q
    |||| ||||||||| ||||||||||| || |||||||||||||| |||| |||||||||||| |||||    
T  34722724 catgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgcgaaagccac 34722791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 6232456 - 6232390
Alignment:
Q  136 ggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||| |||||| ||||||||||||| ||||||||| ||| || ||||||||||| ||||||    
T  6232456 ggtctgtttgctaacactcaaaaaagagcttttagctcttagcttataacttataagctcgtttgac 6232390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 8339940 - 8340010
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||   |||||||||||| ||||||||||||| ||| ||||||| || ||||||    
T  8339940 ttagggtctgtttggtaacatttaaaaaagagcttttagctcttaacttatagtttataagttcgtttgac 8340010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 16486844 - 16486913
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| | |||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  16486844 ttagggtctgtttggtta-acccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 16486913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 3377357 - 3377423
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| | |||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  3377357 gggtctgtttggtta-acccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 3377423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 6760784 - 6760721
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||||||   | |||||||||||| ||||||||| ||| ||||||||||||||    
T  6760784 ttagggtctgtttggtaaactcaaaaaaagagcttttagctcttagcttatagcttataagctc 6760721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 10823103 - 10823170
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| || |||||||||  |||||| | |||||||||||| ||||    
T  10823103 gcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcgaaagcca 10823170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 21865210 - 21865277
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  21865210 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 21865277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 22593177 - 22593243
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| ||  ||||||||| |||||| | |||||||||||| ||||    
T  22593177 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtc-ggaaccggtgcgaaagcca 22593243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7747314 - 7747384
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||||||||||||| ||   |||||||  |||||| | |||||||||||| ||||    
T  7747314 tgtgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagcca 7747384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 9886954 - 9887023
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| | ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  9886954 ttagggtctgtttggtta-acctaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 9887023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 18212081 - 18212151
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| |  |||||||| |||||| ||||| ||| ||| |||||||||||||| ||||||    
T  18212081 ttagggtctgtttggttaaccccaaaaaggagcttttagcttttaccttatagcttataagctcgtttgac 18212151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 25540467 - 25540405
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||||||||||| ||  ||||||||| |||||| | ||||||||||||    
T  25540467 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 25540405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34346353 - 34346283
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||||| | ||||| || | |||||||| |||||| | |||||||||||| ||||    
T  34346353 tgtgcatgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgcgaaagcca 34346283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 38962806 - 38962868
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||| |||||||| ||  ||||||||| |||||||| ||| ||||||||    
T  38962806 gcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaa 38962868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16325635 - 16325700
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||||||| ||||| ||  ||||| ||| |||||| | ||||||||||||    
T  16325635 tgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaa 16325700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39201574 - 39201513
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtg 62  Q
    |||||||||||||||||||||||||||||| ||   |||||||| |||||| | ||||||||    
T  39201574 tgtgcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44773303 - 44773368
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||  || |||||||||||| || | ||||||||||||||| | ||||||||||||    
T  44773303 tgtgcatgcctctgtgcgtgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaa 44773368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 2546502 - 2546434
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||  ||  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  2546502 agggtctgtttgagaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 2546434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 4453697 - 4453633
Alignment:
Q  138 tctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  4453697 tctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 4453633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 18710154 - 18710221
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||  |||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  18710154 agggtctgtttgggaa-actaaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 18710221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 650956 - 650890
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  650956 gggtctgtttggttaaccccaaaaaagagcttttagct-ttagcttatagcttataagctcgtttgac 650890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 8410174 - 8410241
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| || ||||| ||||  ||||| | |||||||||||| ||||    
T  8410174 gcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaagcca 8410241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 10026679 - 10026632
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    ||||||||||||||||||||||||||| ||  ||||||||| ||||||    
T  10026679 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtc 10026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 10046540 - 10046493
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    ||||||||||||||||||||||||||| ||  ||||||||| ||||||    
T  10046540 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtc 10046493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 12455353 - 12455420
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| || | |||| ||| |||||| | |||||||||||| ||||    
T  12455353 gcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaagcca 12455420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 13026474 - 13026419
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccg 59  Q
    ||||||||||||||||||||||||||| ||| |||| |||| | |||||| |||||    
T  13026474 gcatgcctctacgcatgagccggattagtcagccacttttggtaggtcagaaaccg 13026419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 13111920 - 13111853
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| ||  ||||||||| ||||| ||||| ||| ||| |||||||||||||| ||||||    
T  13111920 gggtctgtttgggaaaccccaaaaaatagcttttagcttttagcttatagcttataagctcgtttgac 13111853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 28525518 - 28525471
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    ||||||||||||||| ||||||||||| ||| |||||||| |||||||    
T  28525518 gcatgcctctacgcacgagccggattagtcatccacctttaatgggtc 28525471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 37560216 - 37560263
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    ||||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  37560216 gcatgcctctacgcacgagccggattaatcgtccacctttgatgggtc 37560263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 38005445 - 38005512
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||| |||||||||||||| || |||||||||| ||| || | ||| |||||||| ||||    
T  38005445 gcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaagcca 38005512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 44945636 - 44945703
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| || |||||||||  ||| || | |||||||||||| ||||    
T  44945636 gcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagcca 44945703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 331544 - 331590
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggt 50  Q
    |||||| |||||||||||||||||||| || |||||||||| |||||    
T  331544 gcatgcttctacgcatgagccggattagtcgcccacctttggtgggt 331590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 21641993 - 21642055
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||||| |||| || ||| |||||| ||||||   ||||||||||||    
T  21641993 gcatgcctctacgcatgagccgaattaatcgcccgcctttggtgggtcgaaaaccggtgcgaa 21642055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 28616442 - 28616380
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||||| ||||| || |||| ||||  |||||||| ||||||||||||    
T  28616442 gcatgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgcgaa 28616380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 13528063 - 13528014
Alignment:
Q  153 ccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||| ||||| ||||| ||||||| |||||||||||||| ||||||    
T  13528063 ccaaaaaaaagcttttagcttttaacttatagcttataagctcgtttgac 13528014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35946778 - 35946843
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||| ||||||||||| ||  ||||| ||| |||||| | ||| ||||||||    
T  35946778 tgtgcatgcctctacgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaa 35946843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 44275630 - 44275687
Alignment:
Q  138 tctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||  |  |||||||||||| ||||||||| ||| ||||||||||||||    
T  44275630 tctgtttggtaaacctaaaaaaagagcttttagctcttagcttatagcttataagctc 44275687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 4385679 - 4385635
Alignment:
Q  158 aaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||| ||||||||| ||| |||||||||||||| ||||||    
T  4385679 aaagagcttttagctcttagcttatagcttataagctcgtttgac 4385635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 8815196 - 8815244
Alignment:
Q  154 caaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||| | ||||| ||||||| |||||||||||||| ||||||    
T  8815196 caaaaaagagcctttagcttttaacttatagcttataagctcgtttgac 8815244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 13564575 - 13564527
Alignment:
Q  147 taacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||| ||| ||||||||| || |||||||||| ||||||||||||||    
T  13564575 taacactcaagaaagagcttttaactcttaacttatagcttataagctc 13564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 18902587 - 18902531
Alignment:
Q  10 ctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||| ||||| ||||| || |||||||||| |||||| | ||||||||||||    
T  18902587 ctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaa 18902531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 31088376 - 31088424
Alignment:
Q  3 tgcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    |||||||||||||||||||| | |||||  |||||||| ||||||||||    
T  31088376 tgcatgcctctacgcatgagtcagattagccacccaccattgatgggtc 31088424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 36999453 - 36999520
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||| |||||||||||| ||||| |||  || |||||||||||||| ||||||    
T  36999453 agggtctgtttgggaa-accaaaaaaagagcttttagcttttagtttatagcttataagctcgtttgac 36999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 38579190 - 38579118
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||| |||||||||| |  || |||||||| ||| ||||| ||| ||| |||||||||||||| ||||||    
T  38579190 acttaggctctgtttggttaaccctaaaaaagaacttttagcttttagcttatagcttataagctcgtttgac 38579118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 40025120 - 40025052
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| ||   |||||||||||||| ||||| ||| ||| |||| ||||||||| ||||||    
T  40025120 agggtctgtttgggaaactccaaaaaagagcttttagcttttagcttatagcatataagctcgtttgac 40025052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 42465215 - 42465145
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  42465215 ttagggttagtttggtaacacccaaaaaagagcttatagctcttaacttatagcttataagctcgtttgac 42465145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 48378191 - 48378260
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||| ||||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||||    
T  48378191 tagggtctctttggtaacacccaaaaaagagcttttacctcttagcttatagcttataagctcatttgac 48378260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15320226 - 15320296
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||| ||||||||||| || |||||||||| |||||||| |||||||||||| ||||    
T  15320226 tgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcca 15320296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 33391868 - 33391937
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||| || ||||||    
T  33391868 tagggtctgtttggtaacacccaaaaaagagtttttagctcttaacttagagcttataagttcgtttgac 33391937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 41785771 - 41785843
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||| |  ||||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  41785771 acttagggtctgtttggttaaccccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 41785843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 47219187 - 47219254
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||| | |||||||||||| ||||    
T  47219187 gcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaagcca 47219254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 28572276 - 28572208
Alignment:
Q  3 tgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||| ||||||||||| || |||||||||| |||||| | |||||||||||| ||||    
T  28572276 tgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcca 28572208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 49853233 - 49853161
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||| |||| ||||||||||| |||||||||||| || |||||| ||| |||||||||||||| ||||||    
T  49853233 acttaggttctgattggtaacacctaaaaaagagcttttaactcttaccttatagcttataagctcgtttgac 49853161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 51950318 - 51950390
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||| ||| ||||||||| |||| ||||||| ||| || ||||||||||| ||||||    
T  51950318 acttagggtctgtttggtaatacctaaaaaagagtttatcgctcttagcttataacttataagctcgtttgac 51950390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 29127962 - 29128029
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||| | ||||| |||||| ||||    
T  29127962 gcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagcca 29128029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 46318938 - 46318879
Alignment:
Q  142 tttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||||||||||||||| || |||||| ||| |||||||||||||| |||||    
T  46318938 tttggtaacacccaaaaaagagcttttatctcttagcttatagcttataagctcgtttga 46318879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 52166278 - 52166215
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||||||  || |||||||||||| ||||||||| ||| ||||||||||||||    
T  52166278 ttagggtctgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctc 52166215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26362034 - 26361964
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||| ||||    
T  26362034 tgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaagcca 26361964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 45368576 - 45368637
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||||||||||||||||| ||||||||||||  || ||  ||||||||||||||    
T  45368576 agggtctgtttggtaacacccaaaaaggagcttatagcttatagctgatagcttataagctc 45368637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 26540926 - 26540994
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  26540926 agggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 26540994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 41246231 - 41246267
Alignment:
Q  136 ggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||||||||||||||||||||||||||    
T  41246231 ggtctgtttggtaacacccaaaaaagagcttatagct 41246267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 26043855 - 26043922
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| || | |||||||| || ||||| |||||| ||||| ||||    
T  26043855 gcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccggggcgaaagcca 26043922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 43330796 - 43330729
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| || |||||||||| |||||||  ||||||| |||| ||||    
T  43330796 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtacgaaagcca 43330729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 45693591 - 45693524
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||| |||||||||||| ||||||||| |||||| ||||| ||| ||||||||||| || ||||||    
T  45693591 gggtctctttggtaacacctaaaaaagagtttatagttcttagcttatagcttataagttcgtttgac 45693524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 49021267 - 49021200
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| ||  ||||| ||| |||||| | |||||||||||| ||||    
T  49021267 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcca 49021200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 3507597 - 3507535
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||||||||||| || | |||||||| |||||| | ||||||||||||    
T  3507597 gcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 3507535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 23511610 - 23511672
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||| ||||||| ||  ||||||||||||||||   ||||||||||||    
T  23511610 gcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcgaa 23511672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30767314 - 30767264
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    |||||||||||||||||| ||||||||||| || |||||||||| ||||||    
T  30767314 tgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 30767264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33251702 - 33251752
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    |||||||||||||||||||||||||||||| ||  |||| |||||||||||    
T  33251702 tgtgcatgcctctacgcatgagccggattagtcgtccacatttgatgggtc 33251752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13367464 - 13367529
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||| |||||||||||||||||| ||||| ||| ||| |||||  | ||||||||||||    
T  13367464 tgtgcatgcctttacgcatgagccggattagtcacctaccgttgttgggtaggaaaccggtgcgaa 13367529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 16127326 - 16127257
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||| ||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  16127326 tagggtctgattggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 16127257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 24536856 - 24536807
Alignment:
Q  153 ccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| ||||||||| ||| |||||||||||||| ||||||    
T  24536856 ccaaaaaagagcttttagctcttagcttatagcttataagctcgtttgac 24536807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 35100160 - 35100220
Alignment:
Q  140 tgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||||||||||| ||||| ||| ||||| ||| |||||||||||||| |||||    
T  35100160 tgtttggtaacacccaaaaaa-agcttttagttcttagcttatagcttataagctcgtttga 35100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 35499567 - 35499635
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| || |||||||||| ||||| ||||| ||| ||| |||||||||||||| ||||||    
T  35499567 tagggtctgtttgggaa-acccaaaaaaaagcttttagcttttagcttatagcttataagctcgtttgac 35499635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 45877498 - 45877559
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||||||||| ||   |||| |||||||||| | ||||||||||||    
T  45877498 catgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaa 45877559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 52857862 - 52857923
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||||  || |||||||||||| |||||||||  || ||||||||||||||    
T  52857862 agggtctgtttggtaaacccaaaaaaagagcttttagctcttagtttatagcttataagctc 52857923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 29081463 - 29081399
Alignment:
Q  138 tctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  29081463 tctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 29081399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 37088246 - 37088318
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||| ||||| ||  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  37088246 acttagggtctttttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 37088318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 41518324 - 41518388
Alignment:
Q  131 cttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||| ||||||| |||||||||||||||| |  || ||  ||||||||||||||    
T  41518324 cttagggtctgtttgataacacctaaaaaagagcttatagtttatagctgatagcttataagctc 41518388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 44545197 - 44545264
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  44545197 agggtctgtttgggaa-accaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 44545264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 46972000 - 46972060
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||||||   | |||||||||||| ||||||||| ||| ||||||||||||||    
T  46972000 gggtctgtttggtaaactcaaaaaaagagcttttagctcttagcttatagcttataagctc 46972060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 2029331 - 2029284
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    |||||||||||||||||||| |||||| || |||||| ||||||||||    
T  2029331 gcatgcctctacgcatgagctggattagtcgcccaccattgatgggtc 2029284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 2121795 - 2121850
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttata 190  Q
    ||||||||||||||| ||| |||||||||||||||| |||||  || |||||||||    
T  2121795 gggtctgtttggtaatacctaaaaaagagcttatagatcttaggttatagcttata 2121850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 3136758 - 3136691
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||| ||||||| ||  ||||||||| | |||| | |||||||||||| ||||    
T  3136758 gcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaagcca 3136691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 8872840 - 8872907
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| ||  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  8872840 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 8872907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 21707135 - 21707178
Alignment:
Q  152 cccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||    
T  21707135 cccaaaaaagagcttttagcttttaacttatagcttataagctc 21707178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 36043730 - 36043671
Alignment:
Q  12 ctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||| ||||||||||| || |||||||||| |||||| | |||||||||||| ||||    
T  36043730 ctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcca 36043671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 38185738 - 38185804
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| | ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  38185738 gggtctgtttggtta-acctaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 38185804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 44064587 - 44064646
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    |||||||||||||||||| |||||||| || | |||||||| |||||| | |||||||||    
T  44064587 gcatgcctctacgcatgaaccggattagtcgctcacctttggtgggtcggaaaccggtgc 44064646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 50499729 - 50499795
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    |||||||||||||| | |||||||||||||||| ||||| ||| ||| ||| |||||||||| |||||    
T  50499729 agggtctgtttggtta-acccaaaaaagagcttttagcttttagcttatagtttataagctcgtttga 50499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7310770 - 7310700
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||| ||||||||||| || | || ||||| |||||| | ||||| |||||| ||||    
T  7310770 tgtgcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaagcca 7310700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 7328887 - 7328948
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||| |||||||||||||||||| || |||||||||| ||||||   ||||||||||||    
T  7328887 gcatgcct-tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaa 7328948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 19948506 - 19948436
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| |  ||||||||||||||| |||||  || ||| ||| |||||||||| ||||||    
T  19948506 ttagggtctgtttggttaaccccaaaaaagagcttttagcttctagcttatagtttataagctcgtttgac 19948436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 35315999 - 35316061
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||| |||||| || ||||| |||| |||||| | ||||| ||||||    
T  35315999 gcatgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaa 35316061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39849111 - 39849149
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccac 39  Q
    |||||||||||||||||||||||||||||| || |||||    
T  39849111 tgtgcatgcctctacgcatgagccggattagtcgcccac 39849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 42496967 - 42497009
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctctta 176  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||    
T  42496967 agggtctgtttagtaacacctaaaaaagagcttataactctta 42497009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 45345195 - 45345126
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| || ||| ||||||||| || ||||| ||| ||| |||||||||||||| ||||||    
T  45345195 ttagggtctgtttgggaa-accaaaaaaagagtttttagcttttagcttatagcttataagctcgtttgac 45345126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 47173555 - 47173601
Alignment:
Q  155 aaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    |||||||||||||||||||||| ||| ||| |||||||||| |||||    
T  47173555 aaaaaagagcttatagctcttagcttataggttataagctcgtttga 47173601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 54261269 - 54261331
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||   |||||||  |||||| | ||||||||||||    
T  54261269 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaa 54261331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 55069742 - 55069684
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    |||||||||||||| ||||||||||| || | |||||||| |||||| | |||||||||    
T  55069742 catgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgc 55069684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 24536721 - 24536672
Alignment:
Q  153 ccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| ||||||||| |||  ||||||||||||| ||||||    
T  24536721 ccaaaaaagagcttttagctcttagcttagagcttataagctcgtttgac 24536672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 26207868 - 26207839
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggatta 30  Q
    ||||||||||||||||||||||||||||||    
T  26207868 tgtgcatgcctctacgcatgagccggatta 26207839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 7650276 - 7650332
Alignment:
Q  10 ctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||| ||||||||||| || |||||||||| |||||  | ||||||||||||    
T  7650276 ctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaa 7650332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 12063913 - 12063857
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataa 191  Q
    |||||||||||||||   |||||||||||||| |||||||||  || ||||||||||    
T  12063913 gggtctgtttggtaaactccaaaaaagagcttttagctcttagtttatagcttataa 12063857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 40563553 - 40563481
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||| |||||||||| |  ||||||||  ||||| ||||| ||| ||| |||||||||||||| ||||||    
T  40563553 acttaggctctgtttggttatccccaaaaagtagcttttagcttttagcttatagcttataagctcgtttgac 40563481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41630576 - 41630536
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttg 44  Q
    |||||||||||| |||||||||||||| || ||||||||||    
T  41630576 gcatgcctctacacatgagccggattagtcgcccacctttg 41630536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 44845590 - 44845658
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  | |||||||||| || ||||| ||| ||| |||||||||||||| ||||||    
T  44845590 agggtctgtttggttaacctcaaaaaagagtttttagcttttagcttatagcttataagctcgtttgac 44845658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 46248149 - 46248082
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||| ||||||| || |||||||||||||||| ||| | ||| ||| |||||||||||||| ||||||    
T  46248149 agggtttgtttgggaa-acccaaaaaagagcttttagtttttagcttatagcttataagctcgtttgac 46248082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 53649776 - 53649832
Alignment:
Q  10 ctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||| ||   |||||||||||| || | ||||||||||||    
T  53649776 ctctacgcatgagccggattagtcgttcacctttgatggatcggaaaccggtgcgaa 53649832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 32168794 - 32168867
Alignment:
Q  129 gacttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||| ||||||    
T  32168794 gacttagggtctgtttggtaacgcccaaaaaagagcttttagctcttagcttatagcttataagctcgtttgac 32168867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 40258821 - 40258919
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgacnnnnnnngatatgtttggtaacactttt 230  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||  ||||||       | |||||||||||||||||||    
T  40258821 ttagggtctgtttggtaacacccaaaaaagagcttttagctcttagcttatagcttataagcttgtttgacagaaaaagctatgtttggtaacactttt 40258919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 21313980 - 21313912
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||| ||||||    
T  21313980 agggtctgtttggtaatacccaaaaaagaacttttagctcttaacttatagcttataagctcgtttgac 21313912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 17192629 - 17192562
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||||| || ||||||    
T  17192629 gggtctgtttggtaacacccaaaaaagagtttttagctcttaacttatagtttataagttcgtttgac 17192562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 38578930 - 38578868
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||| | ||||||||||||    
T  38578930 gcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 38578868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 3353470 - 3353532
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||||||||||| ||  ||||||||||||| |||| ||||||||||||    
T  3353470 gcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaa 3353532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22993433 - 22993363
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||| || |||||||| || | |||||||| |||||||| |||||||||||| ||||    
T  22993433 tgtgcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaagcca 22993363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 44743689 - 44743751
Alignment:
Q  140 tgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||| ||||| ||||||||| ||| ||| |||||||||| ||||||    
T  44743689 tgtttggtaacacccaaaaaaaagcttttagctcttagcttatagtttataagctcgtttgac 44743751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14535334 - 14535398
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcga 65  Q
    |||||||||||||||||| |||| |||||| || |||||| |||||||||||| ||| |||||||    
T  14535334 tgtgcatgcctctacgcacgagctggattagtcgcccaccattgatgggtcagaaactggtgcga 14535398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 21741933 - 21742005
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||| |  ||||||||||||||| ||| | ||| ||| |||||||||||||| ||||||    
T  21741933 acttagggtctgtttggttaaccccaaaaaagagcttttagattttagcttatagcttataagctcgtttgac 21742005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13095904 - 13095963
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    ||||||||||||||||||||||||||| || | |||||||| |||||| | |||||||||    
T  13095904 gcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 13095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 40106188 - 40106145
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctctta 176  Q
    |||||| ||||||||||||||||||||||||||| |||||||||    
T  40106188 tagggtatgtttggtaacacccaaaaaagagcttttagctctta 40106145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 42210325 - 42210258
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| ||||||||| ||| |||||| | ||||| |||||| ||||    
T  42210325 gcatgcctctacgcacgagccggattaatcacccaccgttggtgggtcggaaaccgatgcgaaagcca 42210258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 43134369 - 43134432
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||||||  || |||||||||||| ||||| ||| ||| ||||||||||||||    
T  43134369 ttagggtctgtttggtaaacccaaaaaaagagcttttagcttttagcttatagcttataagctc 43134432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 48551903 - 48551970
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||| ||||||||||||| ||  ||||||||||||| || | |||||||||||| ||||    
T  48551903 gcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaagcca 48551970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5069881 - 5069811
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||  |||||||||| || |||||||||| |||||| | ||||| |||||| ||||    
T  5069881 tgtgcatgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagcca 5069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 19914766 - 19914720
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggt 50  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||    
T  19914766 gcatgcctctacgcatgagccagattaatcgcccacctttgatgggt 19914720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22974010 - 22974080
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||| |||||||||||||| ||||| ||  ||||||||| |||||||| |||||| ||||| ||||    
T  22974010 tgtgcatgcgtctacgcatgagccagattagtcgtccacctttggtgggtcagaaaccggcgcgaaagcca 22974080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 42375972 - 42375903
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||| |||||||| | |||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  42375972 ttagggtatgtttggtta-acccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 42375903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 46879718 - 46879656
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataag 192  Q
    ||||||||||||||||||||||| |||||| ||||||||||||  || ||  |||||||||||    
T  46879718 acttagggtctgtttggtaacacacaaaaaggagcttatagcttatagctgatagcttataag 46879656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 47471152 - 47471083
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| | |||||||||||||| | ||||| ||| ||| |||||||||||||| ||||||    
T  47471152 ttagggtctgtttggtta-acccaaaaaagagcgtttagcttttagcttatagcttataagctcgtttgac 47471083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 48804729 - 48804791
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||  ||||| ||| |||||| | ||||||||||||    
T  48804729 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 48804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 483170 - 483110
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||||||| ||  |||||||||||| ||||||||| ||| ||||||||||||||    
T  483170 agggtctgtttggtaa-acttaaaaaagagcttttagctcttagcttatagcttataagctc 483110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 21254886 - 21254818
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| | ||  |||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  21254886 tagggtctgtttggtta-acttaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 21254818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 40637350 - 40637281
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| |  | ||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  40637350 tagggtctgtttggttaacctcaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 40637281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 36436120 - 36436188
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  ||||||||||||||| ||||| ||| ||| || ||||||||||| ||||||    
T  36436120 agggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatatcttataagctcgtttgac 36436188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36619320 - 36619269
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtca 52  Q
    |||||||||||||||||||||||||||||| ||  ||||| ||| |||||||    
T  36619320 tgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtca 36619269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 43862035 - 43861968
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| |||  |||||||| ||| ||   |||||||||||| ||||    
T  43862035 gcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaagcca 43861968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 45960066 - 45960007
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    |||||||||||||||| |||||||||| || | |||||||||||| || | |||||||||    
T  45960066 gcatgcctctacgcataagccggattagtcgctcacctttgatggatcggaaaccggtgc 45960007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 1605988 - 1606054
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||| || |||||||||||| || |||||||||| ||| || | |||||||||||| ||||    
T  1605988 catgcctctaggcttgagccggattagtcgcccacctttggtggatcggaaaccggtgcgaaagcca 1606054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 4228816 - 4228770
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    |||||| ||||||||||||||||||| || |||||| ||||||||||    
T  4228816 catgcccctacgcatgagccggattagtcgcccaccattgatgggtc 4228770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 8734749 - 8734687
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||| ||||| ||||| ||||| || |||||||||| |||||| | ||||||||||||    
T  8734749 gcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaa 8734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 27028325 - 27028387
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||| ||||||| |||||| || | |||||||| |||||| | ||||||||||||    
T  27028325 gcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 27028387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 36407182 - 36407252
Alignment:
Q  122 caatagtgacttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataag 192  Q
    |||||| ||| |||||| ||||||||||  || |||||||||||| || |||||| ||| |||||||||||    
T  36407182 caatagagacatagggtatgtttggtaaacccaaaaaaagagcttttaactcttagcttatagcttataag 36407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 42587573 - 42587504
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||  || ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  42587573 ttagggtctgtttgagaa-accaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 42587504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 49142731 - 49142685
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    |||||||||||||| ||||||||||| |  |||||||||||||||||    
T  49142731 catgcctctacgcacgagccggattagttgcccacctttgatgggtc 49142685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 19757705 - 19757644
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||| ||||| ||||||||||||||||| ||  || ||  ||||||||||||||    
T  19757705 agggtctgtttgataacatccaaaaaagagcttataacttatagctaatagcttataagctc 19757644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 165
Target Start/End: Complemental strand, 21316764 - 21316735
Alignment:
Q  136 ggtctgtttggtaacacccaaaaaagagct 165  Q
    ||||||||||||||||||||||||||||||    
T  21316764 ggtctgtttggtaacacccaaaaaagagct 21316735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 38531364 - 38531327
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  38531364 gggtttgtttggtaacacctaaaaaagagcttatagct 38531327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 1342755 - 1342787
Alignment:
Q  140 tgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||| ||||||||||||||||||    
T  1342755 tgtttggtaacaccaaaaaaagagcttatagct 1342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 34127698 - 34127646
Alignment:
Q  14 acgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||| ||||||||||| || |||||||||| |||||||  ||||||||||||    
T  34127698 acgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaa 34127646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 36246568 - 36246497
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||| |||||||||| | |||||||||  ||||| ||||| ||| ||| |||||||||||||| ||||||    
T  36246568 acttaggctctgtttggtta-acccaaaaagtagcttttagcttttagcttatagcttataagctcgtttgac 36246497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 39420886 - 39420942
Alignment:
Q  7 tgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    |||||||||||||||||||||||| ||  | |||||||||||| | | |||||||||    
T  39420886 tgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgc 39420942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 48244416 - 48244352
Alignment:
Q  7 tgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||||||| || | |||||||| ||| ||   |||||||||||| ||||    
T  48244416 tgcctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgcgaaagcca 48244352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 25872381 - 25872312
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||| |||||||||||||||||||||    
T  25872381 tagggtctgtttggtaacacccaaaaaagagcttttagctcgtagcttatagcttataagctcatttgac 25872312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 5521273 - 5521315
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5521273 acttagggtctgtttggtaacacccaaaaaagagcttatagct 5521315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9812913 - 9812983
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||| ||||||||||| |||||||| || |||||||||| |||||||| |||||||||||| ||||    
T  9812913 tgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcca 9812983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12705055 - 12705125
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||| ||||||||||| |||||||| || |||||||||| |||||||| |||||||||||| ||||    
T  12705055 tgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcca 12705125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12766172 - 12766242
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||| || ||||| || |||||||||| |||||||| |||||||||||| ||||    
T  12766172 tgtgcatgcctctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcca 12766242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 1174745 - 1174810
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||||||||  || |||||||||||| ||||||||| ||| ||||||||||||||    
T  1174745 acttagggtctgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctc 1174810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 36685781 - 36685849
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  ||||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  36685781 agggtctgtttggttaaccccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 36685849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 42086371 - 42086438
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| ||  ||||||||| |||||| | |||||||||||| ||||    
T  42086371 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcca 42086438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 14728127 - 14728189
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| |  | ||||||||||||||| | ||||||||||||    
T  14728127 gcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaa 14728189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 39099841 - 39099783
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    |||||||||||||||||||||||||| || |||||||||| |||||| | |||||||||    
T  39099841 catgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 39099783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 10697234 - 10697299
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcattt 199  Q
    ||||| ||||||||||  || |||||||||||| ||||||||| ||| ||||||||||||||||||    
T  10697234 agggtttgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctcattt 10697299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 12713276 - 12713345
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| ||  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  12713276 tagggtctgtttgggaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 12713345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 12774540 - 12774609
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| ||  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  12774540 tagggtctgtttgggaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 12774609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 1538475 - 1538542
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| ||  ||||| ||| |||||| | |||||||||||| ||||    
T  1538475 gcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaagcca 1538542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 9805048 - 9805115
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| ||  ||||||||| |||||| | ||| |||||||| ||||    
T  9805048 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaagcca 9805115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 4221646 - 4221577
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| | || ||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  4221646 ttagggtctgtttggtta-actcaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 4221577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 28857194 - 28857252
Alignment:
Q  8 gcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||| || | |||||||| |||||| | ||||||||||||    
T  28857194 gcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 28857252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 32382815 - 32382881
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  32382815 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttga 32382881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 36028149 - 36028111
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  36028149 agggtctgtttggtaacacctaaaaaagagcttatagct 36028111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 38369743 - 38369805
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||| ||||||| | ||||||||||||||||| || || |||||||||    
T  38369743 gcatgcctctacgcacgagtcggattagtaacccacctttgatgggttagaaatcggtgcgaa 38369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 6893539 - 6893482
Alignment:
Q  145 ggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||||  ||||||||| ||| ||| |||||||||| ||||||    
T  6893539 ggtaacacccaaaaaagagctgttagctcttagcttatagtttataagctcgtttgac 6893482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7866622 - 7866687
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||| || |||||||| || |||||||||| ||||| || |||| |||||||    
T  7866622 tgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggttagaaaccagtgcgaa 7866687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 14647529 - 14647461
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| | ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  14647529 tagggtctgtttggtta-acctaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 14647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 30774364 - 30774303
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||| ||||||||  || |||||||||||| ||||||||| ||| ||||||||||||||    
T  30774364 agggtctctttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctc 30774303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 42291567 - 42291506
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||| ||||||||||| ||  ||||||||||||| || | ||||||||||||    
T  42291567 catgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaa 42291506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 1711379 - 1711307
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||| ||  || |||||||||||| |||||  || ||| |||||||||||||| ||||||    
T  1711379 acttagggtctgtttgggaaacccaaaaaaagagcttttagcttatagcttatagcttataagctcgtttgac 1711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 3669509 - 3669573
Alignment:
Q  137 gtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    |||||||| |||||||| |||||||||||| ||||||||| ||| ||| ||||||| || |||||    
T  3669509 gtctgttttgtaacacctaaaaaagagcttttagctcttagcttatagtttataagttcgtttga 3669573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 5591554 - 5591621
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  5591554 agggtctgtttgggaa-accaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 5591621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 7308426 - 7308370
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggt 61  Q
    |||||||||||||||||||||||||| || | |||||||||||| |||  |||||||    
T  7308426 catgcctctacgcatgagccggattagtcgctcacctttgatggatcaaaaaccggt 7308370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 14235778 - 14235722
Alignment:
Q  3 tgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccg 59  Q
    |||||| ||||| ||||||| ||||||| ||||||||||||| |||||||| |||||    
T  14235778 tgcatgactctaagcatgagtcggattagtcacccacctttggtgggtcagaaaccg 14235722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 39744713 - 39744646
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  39744713 agggtctgtttgggaa-accaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 39744646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 2236687 - 2236620
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| ||  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  2236687 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 2236620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 13228643 - 13228576
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| ||   |||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  13228643 gggtctgtttgggaaactccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 13228576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 35236838 - 35236779
Alignment:
Q  136 ggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||  |  |||||||||||| ||||||||| ||| ||||||||||||||    
T  35236838 ggtctgtttggtaaaccaaaaaaaagagcttttagctcttagcttatagcttataagctc 35236779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 42861281 - 42861214
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| ||  ||||| ||| |||||| |  ||||||||||| ||||    
T  42861281 gcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaagcca 42861214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 2485240 - 2485302
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||| ||||| ||||||| || | ||||||||||||||| | ||||| ||||||    
T  2485240 gcatgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaa 2485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 11845864 - 11845818
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggt 50  Q
    ||||||||||||| |||||||| |||| || ||||||||||||||||    
T  11845864 gcatgcctctacgtatgagccgaattaatcgcccacctttgatgggt 11845818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 20525882 - 20525944
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||  ||||| ||| ||| || | ||||||||||||    
T  20525882 gcatgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgcgaa 20525944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 8513564 - 8513625
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||| ||||| ||||| ||  ||||||||| |||||| | ||||||||||||    
T  8513564 catgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaa 8513625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 28857002 - 28857055
Alignment:
Q  13 tacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||| || | |||||||| |||||| | ||||||||||||    
T  28857002 tacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 28857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 11664042 - 11664002
Alignment:
Q  155 aaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||| ||||||||| ||| ||||||||||||||    
T  11664042 aaaaaagagcttttagctcttagcttatagcttataagctc 11664002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 14588680 - 14588640
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttg 44  Q
    ||||||||||||||||||||||||||| ||  |||||||||    
T  14588680 gcatgcctctacgcatgagccggattagtcgtccacctttg 14588640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 30412784 - 30412716
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| ||  || |||||| ||||| ||||| ||| ||| |||||||||||||| ||||||    
T  30412784 agggtctgtttgggaaacccaaaaaaaaagcttttagcttttagcttatagcttataagctcgtttgac 30412716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 39275389 - 39275456
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||  |||||| ||||| ||||| ||||||| |||||||||||||| ||||||    
T  39275389 agggtctgtttgggaa-actaaaaaaatagcttttagcttttaacttatagcttataagctcgtttgac 39275456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 41826357 - 41826429
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||| ||||||||||| |||||| |||||| ||||||||||||  ||  |  |||||||||||||| ||||||    
T  41826357 acttcgggtctgtttgataacacacaaaaaggagcttatagcttatagttgatagcttataagctcgtttgac 41826429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 8932708 - 8932775
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| ||||    
T  8932708 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaagcca 8932775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 8944174 - 8944241
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| ||||    
T  8944174 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaagcca 8944241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 29415092 - 29415024
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| ||||||    
T  29415092 agggtctgtttggtaacacctaaaaaagagtttatagctcttagcttatagcttataagctcgtttgac 29415024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 3636819 - 3636761
Alignment:
Q  136 ggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagct 194  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||    
T  3636819 ggtctgtttggtaacattcaaaaaagagcttttagctcttaacttatagcttataagct 3636761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 5253286 - 5253224
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||| | ||||||||||||    
T  5253286 gcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaa 5253224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8612040 - 8611970
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||| ||||||||||| |||||||| || |||||||||| |||||||| |||||||||||| ||||    
T  8612040 tgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcca 8611970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 9633688 - 9633621
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| || |||||||||| |||||| | |||||||||||| ||||    
T  9633688 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcca 9633621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 3108185 - 3108143
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  3108185 acttagggtctgtttggtaacacccagaaaagagcttatagct 3108143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14783486 - 14783416
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||||||||||||| ||  ||||| ||| |||||| | |||||||||||| ||||    
T  14783486 tgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcca 14783416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 15591328 - 15591288
Alignment:
Q  131 cttagggtctgtttggtaacacccaaaaaagagcttatagc 171  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  15591328 cttagggtctgtttagtaacacccaaaaaagagcttatagc 15591288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 30788916 - 30788849
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||| ||| ||||||||||| || |||||||||| |||||| | |||||||||||| ||||    
T  30788916 gcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcca 30788849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 6606159 - 6606093
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||||||||| ||  ||||| ||| |||||| | |||||||||||| ||||    
T  6606159 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcca 6606093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 14227715 - 14227649
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  14227715 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttga 14227649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 17114959 - 17114913
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    |||||||||||||||||||||||||| || |||||||||||| ||||    
T  17114959 catgcctctacgcatgagccggattagtcgcccacctttgataggtc 17114913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 33540893 - 33540855
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33540893 agggtctgtttggtaacatccaaaaaagagcttatagct 33540855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 1806499 - 1806428
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||| ||||||||||||| | |||||||||||||||| |||||  || ||| |||||||||||||| ||||||    
T  1806499 actttgggtctgtttggtta-acccaaaaaagagcttttagcttatagcttatagcttataagctcgtttgac 1806428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 7317794 - 7317734
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataag 192  Q
    ||||| ||||||||||||   | |||||||||||| ||||||||||||| |||||||||||    
T  7317794 ttaggatctgtttggtaaactcaaaaaaagagcttttagctcttaacttatagcttataag 7317734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 32731728 - 32731792
Alignment:
Q  138 tctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  32731728 tctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 32731792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 34903925 - 34903993
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| ||   |||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  34903925 agggtctgtttgggaaactccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 34903993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 2271366 - 2271307
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    ||||| ||||||||| ||||||||||| ||  |||||||||||||||||| |||| ||||    
T  2271366 gcatgtctctacgcacgagccggattagtcgtccacctttgatgggtcagaaaccagtgc 2271307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 5029864 - 5029931
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||  |||||| || |||| |||||||||||| | ||| |||||||| ||||    
T  5029864 gcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaagcca 5029931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 7292717 - 7292678
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  7292717 tagggtctgtttgataacatccaaaaaagagcttatagct 7292678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 8938765 - 8938820
Alignment:
Q  11 tctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| |||| ||  |||||||||||||||| | ||||||||||||    
T  8938765 tctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaa 8938820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 12297331 - 12297398
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| |  ||||||||||||||| || || ||| ||| |||||||||||||| ||||||    
T  12297331 gggtctgtttggttaaccccaaaaaagagcttttaccttttagcttatagcttataagctcgtttgac 12297398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 19089545 - 19089612
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| ||  | ||||||| |||||| | |||||||||||| ||||    
T  19089545 gcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaagcca 19089612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 21898695 - 21898762
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||||||||||| ||   |||||||  |||||| | |||||||||||| ||||    
T  21898695 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagcca 21898762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 31452134 - 31452067
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| || ||  |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  31452134 gggtctgtttgggaaaacaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 31452067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 5681500 - 5681534
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttata 169  Q
    ||||||||||||||||| |||||||||||||||||    
T  5681500 gggtctgtttggtaacatccaaaaaagagcttata 5681534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 29333202 - 29333140
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||||| || | ||  ||||||||| | |||| ||||||||||||||    
T  29333202 gcatgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcggtaaccggtgcgaa 29333140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 31100192 - 31100128
Alignment:
Q  138 tctgtttggtaacacccaaaa-aagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| |||||||| |||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  31100192 tctgtttggtaa-acccaaaataagagcttttagcttttagcttatagcttataagctcgtttgac 31100128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12606477 - 12606517
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttg 44  Q
    ||||||||||||||| ||||||||||| || ||||||||||    
T  12606477 gcatgcctctacgcacgagccggattagtcgcccacctttg 12606517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 34233092 - 34233028
Alignment:
Q  138 tctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||| |  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  34233092 tctgtttggttatcccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 34233028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 19169234 - 19169165
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||| |||||| |||||||||||||| ||||||||||||| |||||||||||||| |||||    
T  19169234 ttagggtctgtttagtaacatccaaaaaagagcttttagctcttaacttatagcttataagctcgtttga 19169165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 29656719 - 29656652
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||| ||||||    
T  29656719 gggtctgtttggtaacacccaaaaaagagcttttagctcttaccttatagcttttaagctcgtttgac 29656652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 31338684 - 31338616
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||| || ||||||    
T  31338684 agggtctatttggtaacactcaaaaaagagcttatagctcttaactgatagcttataagttcgtttgac 31338616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 4517375 - 4517305
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| |  ||||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  4517375 ttagggtctgtttggttaatcccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 4517305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 7246709 - 7246647
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||| | ||||||||||||    
T  7246709 gcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 7246647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 12234149 - 12234081
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  ||||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  12234149 agggtctgtttggttaaccccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 12234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 11600646 - 11600741
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgacnnnnnnngatatgtttggtaacactttt 230  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||       | |||||||||||||||||||    
T  11600646 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctatgtttggtaacactttt 11600741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 24166498 - 24166560
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||| || | ||||||||||||    
T  24166498 gcatgcctctacgcacgagccagattagtcacccacctttgatggatcggaaaccggtgcgaa 24166560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 40780924 - 40780862
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||  ||||||||| |||||| | ||||||||||||    
T  40780924 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 40780862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 55764522 - 55764583
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    ||||||||||||||||  || |||||||||||| ||||||||| ||| ||||||||||||||    
T  55764522 agggtctgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctc 55764583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 47417657 - 47417589
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| ||  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  47417657 agggtctgtttgggaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 47417589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 15635910 - 15635961
Alignment:
Q  140 tgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataa 191  Q
    ||||||||||||||||||||||||||| || |||||| ||| ||||||||||    
T  15635910 tgtttggtaacacccaaaaaagagcttttacctcttagcttatagcttataa 15635961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 26443283 - 26443354
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    |||| ||||||||||||||||| ||||||||||||||||||||  || |   |||||||||||||| |||||    
T  26443283 actttgggtctgtttggtaacatccaaaaaagagcttatagcttatagcagatagcttataagctcgtttga 26443354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 35777567 - 35777500
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  35777567 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 35777500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 8829999 - 8829929
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| ||  ||||||||||||||| ||| | ||| ||| |||||||||||||| ||||||    
T  8829999 ttagggtctgtttgggaaaccccaaaaaagagcttttagtttttagcttatagcttataagctcgtttgac 8829929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 9043791 - 9043697
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgacnnnnnnngatatgtttggtaacactttt 230  Q
    |||||||||||| || || ||||||||||||| ||||| ||| ||| |||||||||||||| ||||||       | |||||||||||||||||||    
T  9043791 gggtctgtttgggaa-actcaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttatgtttggtaacactttt 9043697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 17080091 - 17080153
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| || | |||||||||||| ||   ||||||||||||    
T  17080091 gcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaa 17080153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 38166075 - 38166137
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||| ||||||||| ||||||||||| || |||||||||| |||||| | ||||||||||||    
T  38166075 gcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 38166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 45520069 - 45520131
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||| ||| |||||| ||||||||||| || ||||||||| ||| ||||||||||||||    
T  45520069 tagggtctctttcgtaacatccaaaaaagagtttttagctcttagcttatagcttataagctc 45520131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 55921082 - 55921144
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||| ||||||||||||| || | |||||||| |||||| | ||||||||||||    
T  55921082 gcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaa 55921144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 1940840 - 1940779
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcga 65  Q
    ||||||||||||||| ||||||||||| || |||||||||| ||||||   |||||||||||    
T  1940840 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 18582806 - 18582874
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| || ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  18582806 tagggtctgtttgggaa-accaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 18582874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 42116857 - 42116926
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| ||  | ||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  42116857 tagggtctgtttgggaaacctcaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 42116926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 55828966 - 55829027
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||| |||||  || |||||||||||| ||||||||| ||| ||||||||||||||    
T  55828966 agggtctgttcggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctc 55829027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 7706334 - 7706402
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||| | |||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  7706334 agggtctgtttgggaaaaccaagaaaagagcttttagcttttagcttatagcttataagctcgtttgac 7706402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 22038539 - 22038471
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  |||| |||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  22038539 agggtctgtttggttaaccccataaaagagcttttagcttttagcttatagcttataagctcgtttgac 22038471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 5472911 - 5472864
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    ||||||||||||||| ||||||||||| || |||||||||| ||||||    
T  5472911 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 5472864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 8941868 - 8941934
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| || ||| |||||||||||| || || ||||||| |||||||||||||| ||||||    
T  8941868 gggtctgtttgggaa-accaaaaaaagagcttttaacttttaacttatagcttataagctcgtttgac 8941934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 14858758 - 14858825
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||| ||||||| | ||| | ||||||||  |||||||||||||||||| |||||||||||| ||||    
T  14858758 gcatgtctctacgtacgagtcagattattcgtccacctttgatgggtcagaaaccggtgcgaaagcca 14858825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 28307218 - 28307285
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| ||  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  28307218 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 28307285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 36145278 - 36145211
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||| |||||||||||||| ||  ||||||||||||  || | |||||||||||| ||||    
T  36145278 gcatgcctctacacatgagccggattagtcgtccacctttgatgaatcggaaaccggtgcgaaagcca 36145211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 45780918 - 45780851
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| |  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  45780918 gggtctgtttggttaaccctaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 45780851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 53273081 - 53273148
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| |  | ||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  53273081 gggtctgtttggttaacctcaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 53273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 53407153 - 53407219
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| | |||| ||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  53407153 gggtctgtttggtta-accccaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 53407219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 56372399 - 56372465
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| || ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  56372399 gggtctgtttgggaa-accaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 56372465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 2559355 - 2559417
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||  |||||||||| ||  ||||||||| |||||| | ||||||||||||    
T  2559355 gcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaa 2559417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 8889070 - 8889128
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtg 62  Q
    ||||| ||||||||||||||||||||| ||  ||||||||| |||||| | ||||||||    
T  8889070 gcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 29895835 - 29895897
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||  ||||| ||| ||| || | ||||||||||||    
T  29895835 gcatgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaa 29895897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 30366327 - 30366293
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttata 169  Q
    ||||||||||| |||||||||||||||||||||||    
T  30366327 gggtctgtttgataacacccaaaaaagagcttata 30366293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 36262829 - 36262763
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||| ||| ||||||| || |||||||||| |||||||| ||||  |||||| ||||    
T  36262829 catgcctctacgcacgagtcggattagtcgcccacctttggtgggtcagaaaccaatgcgaaagcca 36262763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 55684665 - 55684702
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  55684665 agggtctgtttggtaa-acccaaaaaagagcttatagct 55684702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 4391882 - 4391845
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  4391882 gggtctgtttggtaacacacaaaaaggagcttatagct 4391845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 6032705 - 6032644
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||| ||||||||||||| ||  | ||||||| |||||| | ||||||||||||    
T  6032705 catgcctctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaa 6032644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10541061 - 10541125
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||| ||||| ||||| ||  ||||||||||||| || | ||||||||||||    
T  10541061 tgtgcatgcctctacgcacgagccagattaatc-gccacctttgatggatcggaaaccggtgcgaa 10541125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 16450349 - 16450410
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||| ||||| ||  ||||||||| | |||| | ||||||||||||    
T  16450349 catgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaa 16450410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16645163 - 16645228
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| |||||| | ||||| || ||||||| || |||||| | ||||||||||||    
T  16645163 tgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgcgaa 16645228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 47682444 - 47682383
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||| ||||||||| ||||||| ||| || |||||||||| |||||| | ||||||||||||    
T  47682444 catgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaa 47682383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 48317341 - 48317292
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggt 50  Q
    |||| ||||||||||||| ||||||||||| || |||||| |||||||||    
T  48317341 tgtgtatgcctctacgcacgagccggattagtcgcccaccgttgatgggt 48317292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 53224214 - 53224251
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  53224214 gggtatgtttggtaacacccaaaaaagagtttatagct 53224251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 20532472 - 20532432
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttg 44  Q
    ||||||||||||||||||||||||| | || ||||||||||    
T  20532472 gcatgcctctacgcatgagccggataagtcgcccacctttg 20532432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 22892511 - 22892551
Alignment:
Q  155 aaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||| ||||||||| ||| ||||||||||||||    
T  22892511 aaaaaagagcttttagctcttagcttatagcttataagctc 22892551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 22944175 - 22944215
Alignment:
Q  155 aaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||| ||||||||| ||| ||||||||||||||    
T  22944175 aaaaaagagcttttagctcttagcttatagcttataagctc 22944215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 24850690 - 24850654
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacc 40  Q
    |||||||||||||||||||| |||||||||| |||||    
T  24850690 gcatgcctctacgcatgagctggattattcatccacc 24850654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 35190792 - 35190753
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagct 172  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  35190792 ttagggtctgtttggtaactccc-aaaaagagcttatagct 35190753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 54946297 - 54946353
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccgg 60  Q
    ||||||||||||||||||||||||||| || |||| | ||| |||||| | ||||||    
T  54946297 gcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccgg 54946353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 28266 - 28198
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||| ||||||    
T  28266 agggtctgtttggtaacactcaaaaaagagcttttagctcttagcttatagcttataagctcgtttgac 28198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 1507909 - 1507842
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||| ||||||    
T  1507909 gggtctgtttggtaacacccaaaaaagagtttttagctcttagcttatagcttataagctcgtttgac 1507842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 3660920 - 3660982
Alignment:
Q  140 tgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||||||    
T  3660920 tgtttggtaacacccaaaaaagagcttttagttcttagcttatagcttataagctcatttgac 3660982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 36043465 - 36043399
Alignment:
Q  136 ggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| || ||||||    
T  36043465 ggtctgtttggtaacacccaaaaaagagcttatagctcttagcttatagcatataagttcgtttgac 36043399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 10173034 - 10172973
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||||||||| || |||||||||| |||||| | ||||||||||||    
T  10173034 catgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaa 10172973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 7024812 - 7024880
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||||||| |||||||||||| ||||||||| | | ||||||||||| || ||||||    
T  7024812 agggtctgtttggtaacacctaaaaaagagcttttagctcttagcatatagcttataagttcgtttgac 7024880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 15348792 - 15348860
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    |||||| |||||||||||| |||||||||||||| ||||||||  ||| |||||||||||||| |||||    
T  15348792 tagggtttgtttggtaacatccaaaaaagagcttttagctctttgcttatagcttataagctcgtttga 15348860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30927794 - 30927732
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgc 63  Q
    |||||||||||||||||||||||||||||| ||  |||| |||| |||||||| |||||||||    
T  30927794 tgtgcatgcctctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgc 30927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34697376 - 34697446
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||||  | ||||| |||||| ||||    
T  34697376 tgtgcatgcctctacgcatgagccggattagtcgcccacttttgatgggttggaaaccgatgcgaaagcca 34697446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 5504076 - 5504137
Alignment:
Q  5 catgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||| | ||||||| ||||    
T  5504076 catgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaa 5504137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 34319359 - 34319419
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||||||  || |||||||||||| ||||||||| ||| ||||||||||||||    
T  34319359 gggtctgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctc 34319419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 44909806 - 44909877
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||| ||||||||||||| | |||| ||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  44909806 actttgggtctgtttggtta-accccaaaaagagcttttagcttttaacttatagcttataagctcgtttgac 44909877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 47134696 - 47134629
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| | |||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  47134696 agggtctgtttggtta-acccaaaaaagagcttttagcttttaccttatagcttataagctcgtttgac 47134629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 17046699 - 17046766
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  17046699 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 17046766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 2479128 - 2479197
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| || ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  2479128 ttagggtctgtttgggaa-accaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 2479197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 16956510 - 16956572
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||||||||||| |||| |||||||| |||||| | |||| |||||||    
T  16956510 gcatgcctctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaa 16956572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 26325856 - 26325918
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||  ||||| ||| |||||| | ||||||||||||    
T  26325856 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 26325918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 26660182 - 26660243
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||  ||||||||| |||||| | ||||||||||||    
T  26660182 gcatgcctctacgcatgagccggattagtc-gccacctttggtgggtcggaaaccggtgcgaa 26660243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 30774056 - 30774121
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||||| ||||||||||| || |||||    
T  30774056 gggtctgtttggtta-acccaaaaaagagcttttagcttttaacttatagcttataagttcgtttga 30774121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 36301271 - 36301202
Alignment:
Q  132 ttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||| |||||||||| | |||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  36301271 ttaggctctgtttggtta-acccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 36301202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 10336560 - 10336604
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgg 48  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||    
T  10336560 gcatgcctctacgcatgagccggattaatcgtccacctttgatgg 10336604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 13121749 - 13121682
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| | |||| ||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  13121749 agggtctgtttggtta-accccaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 13121682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 31150590 - 31150523
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || |||||||||| ||||| ||||| ||| ||| |||||||||||||| ||||||    
T  31150590 agggtctgtttgggaa-acccaaaaaaaagcttttagcttttagcttatagcttataagctcgtttgac 31150523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 33498903 - 33498859
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgg 48  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||    
T  33498903 gcatgcctctacgcatgagccggattagtcgtccacctttgatgg 33498859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 33524493 - 33524557
Alignment:
Q  130 acttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagct 194  Q
    |||| ||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||    
T  33524493 actttgggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagct 33524557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 8764035 - 8764102
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| ||  ||||| ||| |||||| | |||||||||||| ||||    
T  8764035 gcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaagcca 8764102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 14254332 - 14254285
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtc 51  Q
    |||||||| |||||||||||||||||| ||  ||||||||||||||||    
T  14254332 gcatgcctttacgcatgagccggattagtcgtccacctttgatgggtc 14254285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 17642068 - 17642001
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| ||  ||||||||| |||||| | ||| |||||||| ||||    
T  17642068 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagcca 17642001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 25601972 - 25602023
Alignment:
Q  151 acccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||||| ||||||    
T  25601972 acccaaaaaagagcttttagctcttagcttataggttataagctcgtttgac 25602023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 30721789 - 30721722
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| ||  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  30721789 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 30721722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 36838860 - 36838793
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||| ||  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  36838860 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 36838793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 37339864 - 37339931
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||| ||||| ||||||||||| || |||||||||| |||||  | |||||||||||| ||||    
T  37339864 gcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaagcca 37339931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 41663920 - 41663853
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||||| |||||| ||  ||||| ||| |||||| | |||||||||||| ||||    
T  41663920 gcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcca 41663853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 43959885 - 43959818
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| || |||||||||  ||| || | |||||||||||| ||||    
T  43959885 gcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagcca 43959818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 51437512 - 51437563
Alignment:
Q  15 cgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||| ||| ||||||||| |||||| | ||||||||||||    
T  51437512 cgcatgagccggattagtcatccacctttggtgggtcggaaaccggtgcgaa 51437563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 4581746 - 4581684
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| |||||||| || ||  ||||||||| |||||| | ||||||||||||    
T  4581746 gcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaa 4581684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 6899602 - 6899664
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||| ||||||  |||||||||| || |||||||||||||| || | ||||||||||||    
T  6899602 gcatgcctttacgcacaagccggattagtcgcccacctttgatggatcggaaaccggtgcgaa 6899664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 9659243 - 9659181
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||| |||||||||||||||||| ||  ||||||||| |||||  | ||||||||||||    
T  9659243 gcatgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaa 9659181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 10422832 - 10422894
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| ||  ||||||||| |  ||| | ||||||||||||    
T  10422832 gcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaa 10422894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18915908 - 18915978
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||| ||||||||||| || | |||| ||| |||||  | |||||||||||| ||||    
T  18915908 tgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaagcca 18915978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 26204260 - 26204310
Alignment:
Q  151 acccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    |||||||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  26204260 acccaaaaaagagcttttagcttttagcttatagcttataagctcgtttga 26204310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 32142910 - 32142848
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||| ||||||||||||| |||| || | ||||||||||||||| | ||||| ||||||    
T  32142910 gcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcggaaaccgatgcgaa 32142848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 33004079 - 33004017
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||| ||||||||||| |||||||||  || ||||||   ||||||||||||    
T  33004079 gcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccggtgcgaa 33004017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 34878626 - 34878672
Alignment:
Q  20 gagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||| |||||||||||||||||||| | || |||||||||    
T  34878626 gagccggattagtcacccacctttgatgggtcggaaatcggtgcgaa 34878672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 42614295 - 42614245
Alignment:
Q  144 tggtaacacccaaaaaagagcttatagctcttaacttttagcttataagct 194  Q
    |||||||||| ||||||||||||||||||||||  || ||| |||||||||    
T  42614295 tggtaacacctaaaaaagagcttatagctcttagtttatagtttataagct 42614245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 25165444 - 25165501
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggt 61  Q
    ||||||||||| |||  |||||||||| |||| |||||||| |||||| |||||||||    
T  25165444 gcatgcctctaggcacaagccggattagtcactcacctttggtgggtcggtaaccggt 25165501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50952274 - 50952323
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggt 50  Q
    |||||||||||||||||| ||| |  |||| |||||||||||||||||||    
T  50952274 tgtgcatgcctctacgcacgagacaaattagtcacccacctttgatgggt 50952323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 51423150 - 51423093
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataag 192  Q
    |||||||||||||||||  ||||||||||||| || || ||| ||| |||||||||||    
T  51423150 gggtctgtttggtaacattcaaaaaagagcttttaacttttagcttatagcttataag 51423093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 7711120 - 7711052
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| ||  || |||||||||||| ||||| ||| ||| ||||||||||| || ||||||    
T  7711120 agggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagttcgtttgac 7711052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 11397951 - 11397891
Alignment:
Q  6 atgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||| ||||||| ||  ||||||||| |||||| | || |||||||||    
T  11397951 atgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaa 11397891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17092544 - 17092480
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcga 65  Q
    |||| ||||||||||||| ||||||||||| ||  ||||||||| | | |||| |||||||||||    
T  17092544 tgtgtatgcctctacgcacgagccggattagtcgtccacctttggtagatcagaaaccggtgcga 17092480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 19899070 - 19899006
Alignment:
Q  138 tctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||| |  ||||||||||||||| ||||| ||| ||| ||||||||||| || ||||||    
T  19899070 tctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagttcgtttgac 19899006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 26843720 - 26843788
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| ||  || |||||| ||||| ||||| ||| ||| |||||||||||||| ||||||    
T  26843720 agggtctgtttggaaaatccaaaaaaatagcttttagcttttagcttatagcttataagctcgtttgac 26843788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 28324644 - 28324608
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacc 40  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  28324644 gcatgcctctacgcatgagccggattagtcactcacc 28324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 29586128 - 29586195
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||  |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  29586128 agggtctgtttgggaa-actaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 29586195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 39826569 - 39826637
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||| ||||| |  |||| |||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  39826569 agggtctgattggttaaccccataaaagagcttttagcttttagcttatagcttataagctcgtttgac 39826637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 42064482 - 42064415
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||| || ||  |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  42064482 agggtctgtttgggaa-actaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 42064415  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 48798134 - 48798102
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacc 36  Q
    ||||||||||||||||||||||||||| |||||    
T  48798134 gcatgcctctacgcatgagccggattagtcacc 48798102  T

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Target: scaffold0376 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12713 - 12778
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||| || |||||||| || ||||||||||||||||||| ||||||||||||    
T  12713 tgtgcatgcctctacgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgcgaa 12778  T

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Target: scaffold0209 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 12619 - 12686
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||||||| ||||||| || |||||||||||||| | || |||||||||||| ||||    
T  12619 gcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaagcca 12686  T

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Target: scaffold0291 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 6901 - 6963
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||||||||||||||||||||||||| || | |||||||| |||||| | ||||||||||||    
T  6901 gcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaa 6963  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 63824 - 63866
Alignment:
Q  135 gggtctgtttggtaacacccaaaaaagagcttatagctcttaa 177  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  63824 gggtctgtttggtaacactcaaaaaagagcttatagctcttaa 63866  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 42895 - 42833
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||| |||||||||||||| || |||||||||| |||||| | ||||||||||||    
T  42895 gcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaa 42833  T

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Target: scaffold1632 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1632
Description:

Target: scaffold1632; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 221 - 157
Alignment:
Q  131 cttagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctc 195  Q
    |||||||||||||||||||   | |||||||||||| ||||||||| ||| ||||||||||||||    
T  221 cttagggtctgtttggtaaactcaaaaaaagagcttttagctcttagcttatagcttataagctc 157  T

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Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 27316 - 27248
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  ||||||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  27316 agggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 27248  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 155774 - 155707
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    ||||||||||||||| ||||||||||| || |||||||||| |||||| | | |||||||||| ||||    
T  155774 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaagcca 155707  T

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Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 25847 - 25785
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    ||||| |||||||| ||| || ||||| ||||||||||||  |||||||| ||||||||||||    
T  25847 gcatgactctacgcgtgaaccagattagtcacccacctttactgggtcagaaaccggtgcgaa 25785  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 126941 - 126873
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    ||||||||||||||| | |||||| ||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  126941 tagggtctgtttggtta-acccaagaaagagcttttagcttttagcttatagcttataagctcgtttgac 126873  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 41926 - 41858
Alignment:
Q  133 tagggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| || ||| |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  41926 tagggtctgtttgggaa-accaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 41858  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 68560 - 68621
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcga 65  Q
    ||||||||||||||| ||||||||||| || |||||||||| ||||||   |||||||||||    
T  68560 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 613 - 678
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||| ||||||| ||||| || | |||||||| |||||| | ||||||||||||    
T  613 tgtgcatgcctctacgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcgaa 678  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 22560 - 22628
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttgac 202  Q
    |||||||||||||| |  || |||||||||||| ||||| ||| ||| |||||||||||||| ||||||    
T  22560 agggtctgtttggttaacccgaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac 22628  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 12898 - 12831
Alignment:
Q  134 agggtctgtttggtaacacccaaaaaagagcttatagctcttaacttttagcttataagctcatttga 201  Q
    ||||||||||||| ||  || |||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  12898 agggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttga 12831  T

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Target: scaffold0316 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 1677 - 1615
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaa 66  Q
    |||||||||||||||||||||  |||| || |||||||||| ||||||   ||||||||||||    
T  1677 gcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaa 1615  T

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Target: scaffold0170 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 9891 - 9945
Alignment:
Q  4 gcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaacc 58  Q
    ||||||||||||||| ||||||||||| ||  ||||||||| |||||||| ||||    
T  9891 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcagaaacc 9945  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41087 - 41157
Alignment:
Q  1 tgtgcatgcctctacgcatgagccggattattcacccacctttgatgggtcagtaaccggtgcgaacgcca 71  Q
    |||||||||||||||||| ||||||||||| || |||| ||||| || ||| | ||||||| |||| ||||    
T  41087 tgtgcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggttcgaaagcca 41157  T

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