View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20262_high_21 (Length: 528)
Name: NF20262_high_21
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20262_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 59 - 426
Target Start/End: Original strand, 21120622 - 21120989
Alignment:
| Q |
59 |
tatggcttcagtttcatgttcattgttgaaccttccttcgaaaatgaagaaccttaccctaacttcatcatcaaattccggttcactaagtttctcccga |
158 |
Q |
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| T |
21120622 |
tatggcttcagtttcatgttcattgttgaaccttccttcgaaaatgaagaaccttaccctaacttcatcatcaaattccggttcactaagtttctcccga |
21120721 |
T |
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| Q |
159 |
aacatttcccaatctagagtcctttcacaaggtacgttctctttgaatacggtccagaggcgtggtgttgttgttgtttgcgaggctgctccaaagaagg |
258 |
Q |
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| T |
21120722 |
aacatttcccaatctagagtcctttcacaaggtacgttctctttgaatacggtccagaggcgtggtgttgttgttgtttgcgaggctgctccaaagaagg |
21120821 |
T |
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| Q |
259 |
ttgattccgccattaagaaagctcttcaggctgagaggcgtcgcgtttacaacaaagctcgtaaatccgagattagaacccgtactaagaaggtaccata |
358 |
Q |
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| T |
21120822 |
ttgattccgccattaagaaagctcttcaggctgagaggcgtcgcgtttacaacaaagctcgtaaatccgagattagaacccgtactaagaaggtaccata |
21120921 |
T |
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| Q |
359 |
actgtaactttaactattttattttagattgctgtattatagctatgacattttctcgaattattatc |
426 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21120922 |
actgtaactttaactattttattttagattgctgtattatagctatgacattttctcgaattattatc |
21120989 |
T |
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