View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20262_high_35 (Length: 452)

Name: NF20262_high_35
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20262_high_35
NF20262_high_35
[»] chr3 (86 HSPs)
chr3 (1-434)||(39203348-39203794)
chr3 (124-291)||(4495676-4495845)
chr3 (125-292)||(7696893-7697067)
chr3 (124-292)||(1217065-1217245)
chr3 (125-287)||(22122918-22123092)
chr3 (124-293)||(40272812-40272995)
chr3 (162-291)||(46421085-46421218)
chr3 (162-292)||(16735416-16735547)
chr3 (164-292)||(8247739-8247871)
chr3 (162-290)||(29366770-29366902)
chr3 (124-291)||(13730602-13730785)
chr3 (162-292)||(22609742-22609872)
chr3 (124-256)||(54032571-54032705)
chr3 (124-292)||(13628790-13628975)
chr3 (162-278)||(26869696-26869813)
chr3 (185-291)||(10870025-10870132)
chr3 (162-291)||(6411872-6412002)
chr3 (164-291)||(52926271-52926391)
chr3 (162-291)||(12914085-12914216)
chr3 (162-292)||(26573103-26573234)
chr3 (124-238)||(31592878-31593004)
chr3 (174-292)||(9607178-9607298)
chr3 (165-292)||(45620881-45621010)
chr3 (123-221)||(31831245-31831344)
chr3 (162-268)||(34420693-34420802)
chr3 (173-292)||(5173782-5173903)
chr3 (173-259)||(516417-516505)
chr3 (124-218)||(15797271-15797377)
chr3 (162-256)||(33926094-33926190)
chr3 (162-282)||(53996615-53996737)
chr3 (165-264)||(7942993-7943094)
chr3 (187-292)||(12525385-12525489)
chr3 (162-265)||(30928197-30928302)
chr3 (162-239)||(10795473-10795554)
chr3 (162-268)||(25944468-25944577)
chr3 (124-291)||(43956472-43956640)
chr3 (162-222)||(47624087-47624148)
chr3 (124-235)||(14986989-14987116)
chr3 (124-209)||(34771364-34771461)
chr3 (162-256)||(45139526-45139624)
chr3 (162-282)||(45948888-45949012)
chr3 (161-269)||(19731000-19731110)
chr3 (162-271)||(33235526-33235639)
chr3 (163-261)||(8410918-8411016)
chr3 (195-269)||(53062036-53062112)
chr3 (162-290)||(25517220-25517353)
chr3 (161-269)||(19751576-19751686)
chr3 (162-245)||(52428527-52428613)
chr3 (124-227)||(54484730-54484848)
chr3 (162-252)||(54374395-54374488)
chr3 (202-282)||(35417902-35417981)
chr3 (172-288)||(21874999-21875111)
chr3 (165-261)||(29106555-29106653)
chr3 (124-167)||(30452909-30452952)
chr3 (161-234)||(43114917-43114994)
chr3 (162-269)||(44403605-44403715)
chr3 (167-218)||(9276313-9276366)
chr3 (361-427)||(34393810-34393876)
chr3 (178-265)||(39211992-39212081)
chr3 (162-222)||(45786264-45786328)
chr3 (162-248)||(55401195-55401284)
chr3 (162-221)||(49013523-49013586)
chr3 (124-217)||(26292382-26292487)
chr3 (171-288)||(26782345-26782464)
chr3 (124-167)||(6242285-6242328)
chr3 (172-269)||(28904941-28905041)
chr3 (162-228)||(31904907-31904975)
chr3 (119-167)||(10484611-10484659)
chr3 (124-163)||(24851301-24851340)
chr3 (124-167)||(47624213-47624256)
chr3 (162-205)||(353399-353444)
chr3 (124-166)||(516527-516569)
chr3 (124-166)||(24577950-24577992)
chr3 (124-166)||(24578040-24578082)
chr3 (126-167)||(353351-353392)
chr3 (124-165)||(40390357-40390398)
chr3 (252-292)||(9276249-9276289)
chr3 (173-267)||(1121286-1121382)
chr3 (124-157)||(5173719-5173752)
chr3 (124-165)||(14266372-14266413)
chr3 (251-288)||(23871418-23871455)
chr3 (160-224)||(16130318-16130385)
chr3 (243-291)||(39430465-39430513)
chr3 (124-160)||(49013473-49013509)
chr3 (164-221)||(50625005-50625064)
chr3 (241-269)||(55400996-55401024)
[»] chr1 (96 HSPs)
chr1 (124-293)||(34725098-34725279)
chr1 (124-291)||(38478282-38478461)
chr1 (162-291)||(32632607-32632737)
chr1 (128-291)||(45812541-45812716)
chr1 (162-291)||(47214488-47214617)
chr1 (124-292)||(14617014-14617196)
chr1 (124-287)||(19414420-19414595)
chr1 (162-291)||(46248003-46248134)
chr1 (162-291)||(18944620-18944753)
chr1 (162-285)||(30395776-30395903)
chr1 (162-291)||(46991781-46991912)
chr1 (162-291)||(22930119-22930248)
chr1 (162-292)||(41319856-41319988)
chr1 (124-291)||(20004090-20004273)
chr1 (162-285)||(12126887-12127010)
chr1 (164-288)||(23768372-23768498)
chr1 (124-254)||(35253187-35253329)
chr1 (162-292)||(27201623-27201757)
chr1 (162-269)||(18724595-18724704)
chr1 (124-291)||(10668197-10668385)
chr1 (162-292)||(27474257-27474388)
chr1 (162-272)||(6925096-6925208)
chr1 (162-292)||(8197019-8197151)
chr1 (166-291)||(4430080-4430207)
chr1 (162-281)||(33222971-33223092)
chr1 (162-286)||(45402077-45402204)
chr1 (124-269)||(50760240-50760385)
chr1 (162-282)||(2435836-2435958)
chr1 (162-270)||(6983861-6983969)
chr1 (162-269)||(11596512-11596620)
chr1 (124-290)||(24564322-24564492)
chr1 (163-268)||(25468314-25468421)
chr1 (173-269)||(35117829-35117927)
chr1 (162-292)||(19932803-19932934)
chr1 (173-269)||(17470407-17470505)
chr1 (162-294)||(44485159-44485292)
chr1 (162-286)||(18742007-18742137)
chr1 (162-270)||(20036218-20036329)
chr1 (162-252)||(35005139-35005233)
chr1 (162-285)||(9939443-9939571)
chr1 (173-266)||(22327101-22327196)
chr1 (216-292)||(34714599-34714675)
chr1 (191-288)||(25290143-25290244)
chr1 (124-258)||(31272381-31272522)
chr1 (173-282)||(50811926-50812037)
chr1 (224-289)||(40424721-40424786)
chr1 (162-282)||(35019217-35019338)
chr1 (173-268)||(19701570-19701667)
chr1 (162-227)||(31382264-31382330)
chr1 (162-269)||(10378785-10378884)
chr1 (161-287)||(18335337-18335465)
chr1 (202-269)||(2435985-2436052)
chr1 (123-205)||(4349703-4349797)
chr1 (182-272)||(14987989-14988081)
chr1 (169-269)||(52910216-52910319)
chr1 (173-236)||(22324925-22324989)
chr1 (173-270)||(15511210-15511311)
chr1 (162-268)||(23371124-23371231)
chr1 (162-269)||(27136701-27136811)
chr1 (180-268)||(39215027-39215117)
chr1 (189-270)||(25554800-25554882)
chr1 (202-291)||(10163736-10163825)
chr1 (180-290)||(18335914-18336026)
chr1 (124-167)||(50606518-50606561)
chr1 (204-290)||(21723642-21723727)
chr1 (173-257)||(19974136-19974221)
chr1 (167-269)||(34679274-34679378)
chr1 (162-202)||(15505632-15505672)
chr1 (162-205)||(21910699-21910742)
chr1 (162-226)||(23796507-23796573)
chr1 (162-245)||(45264449-45264535)
chr1 (161-267)||(19656154-19656263)
chr1 (162-204)||(43768205-43768247)
chr1 (181-227)||(44745854-44745900)
chr1 (169-221)||(21723731-21723784)
chr1 (204-277)||(22151495-22151568)
chr1 (162-237)||(30682845-30682920)
chr1 (162-205)||(31442439-31442483)
chr1 (162-205)||(1517361-1517404)
chr1 (124-167)||(9939579-9939622)
chr1 (124-167)||(19386576-19386619)
chr1 (124-167)||(27474395-27474438)
chr1 (162-226)||(34149010-34149076)
chr1 (124-167)||(35005240-35005283)
chr1 (126-165)||(42432228-42432267)
chr1 (127-166)||(45402212-45402251)
chr1 (124-166)||(1517311-1517353)
chr1 (124-166)||(23796581-23796623)
chr1 (216-258)||(43768168-43768210)
chr1 (164-205)||(46859131-46859173)
chr1 (136-166)||(47214625-47214655)
chr1 (180-264)||(49722641-49722726)
chr1 (124-167)||(18944760-18944804)
chr1 (227-287)||(21006125-21006185)
chr1 (124-160)||(30395726-30395762)
chr1 (127-167)||(46991919-46991959)
[»] chr4 (95 HSPs)
chr4 (124-292)||(48598825-48599005)
chr4 (124-292)||(20224937-20225117)
chr4 (124-291)||(11054148-11054327)
chr4 (124-291)||(47528530-47528709)
chr4 (162-292)||(5648212-5648343)
chr4 (163-292)||(6430677-6430807)
chr4 (162-292)||(5306714-5306845)
chr4 (124-294)||(30639331-30639514)
chr4 (124-267)||(9832313-9832468)
chr4 (162-288)||(16911519-16911649)
chr4 (165-272)||(40915802-40915910)
chr4 (128-264)||(39077800-39077948)
chr4 (124-284)||(16408601-16408777)
chr4 (163-293)||(14590789-14590922)
chr4 (126-253)||(29207900-29208039)
chr4 (124-291)||(23501747-23501924)
chr4 (162-291)||(21646918-21647051)
chr4 (162-265)||(17043444-17043549)
chr4 (162-291)||(37494805-37494936)
chr4 (162-280)||(8473672-8473790)
chr4 (162-270)||(19027823-19027933)
chr4 (123-272)||(44363129-44363294)
chr4 (162-265)||(54175043-54175149)
chr4 (162-269)||(35567146-35567255)
chr4 (162-245)||(47443957-47444042)
chr4 (164-281)||(30496374-30496491)
chr4 (162-262)||(41018844-41018945)
chr4 (174-291)||(10660358-10660477)
chr4 (174-291)||(10874503-10874622)
chr4 (174-291)||(13256463-13256578)
chr4 (174-288)||(54730206-54730323)
chr4 (188-288)||(17315375-17315476)
chr4 (165-269)||(487187-487294)
chr4 (161-262)||(7385525-7385628)
chr4 (162-259)||(25463108-25463207)
chr4 (162-290)||(54966977-54967105)
chr4 (162-291)||(55766516-55766647)
chr4 (163-269)||(39029111-39029220)
chr4 (162-269)||(47441580-47441689)
chr4 (162-288)||(14983791-14983919)
chr4 (173-270)||(25343162-25343261)
chr4 (202-286)||(30352683-30352767)
chr4 (187-269)||(42164224-42164307)
chr4 (162-291)||(55830771-55830902)
chr4 (162-267)||(30690226-30690340)
chr4 (215-288)||(5313099-5313172)
chr4 (162-266)||(49938643-49938746)
chr4 (162-267)||(30581515-30581624)
chr4 (162-267)||(32478841-32478942)
chr4 (168-241)||(10277813-10277886)
chr4 (188-269)||(43035224-43035307)
chr4 (162-221)||(49796822-49796882)
chr4 (162-291)||(20405047-20405174)
chr4 (124-228)||(20639658-20639777)
chr4 (162-227)||(7909331-7909397)
chr4 (162-233)||(9987884-9987957)
chr4 (173-267)||(23580269-23580365)
chr4 (202-282)||(54640431-54640510)
chr4 (173-257)||(7038041-7038126)
chr4 (124-167)||(38786701-38786744)
chr4 (166-221)||(51865092-51865149)
chr4 (172-260)||(32629330-32629418)
chr4 (162-268)||(3580890-3580994)
chr4 (162-269)||(20908686-20908797)
chr4 (164-266)||(49938490-49938594)
chr4 (124-221)||(25629073-25629184)
chr4 (124-167)||(32484325-32484368)
chr4 (175-282)||(51420537-51420646)
chr4 (121-167)||(40553934-40553980)
chr4 (122-167)||(11394944-11394989)
chr4 (122-167)||(11404671-11404716)
chr4 (122-167)||(38755906-38755951)
chr4 (205-269)||(12257688-12257752)
chr4 (248-288)||(18969698-18969738)
chr4 (123-167)||(20225168-20225212)
chr4 (125-164)||(8473621-8473660)
chr4 (162-233)||(21489099-21489173)
chr4 (237-292)||(29879624-29879679)
chr4 (124-167)||(35532084-35532127)
chr4 (124-167)||(54175157-54175200)
chr4 (161-236)||(17079700-17079777)
chr4 (199-269)||(41549358-41549428)
chr4 (166-254)||(10379997-10380086)
chr4 (202-282)||(36589708-36589786)
chr4 (162-205)||(12711499-12711542)
chr4 (128-163)||(28494247-28494282)
chr4 (124-167)||(33836487-33836530)
chr4 (124-167)||(56322992-56323035)
chr4 (124-166)||(10277757-10277799)
chr4 (224-282)||(50856350-50856407)
chr4 (127-160)||(21647065-21647098)
chr4 (124-160)||(13256399-13256435)
chr4 (161-206)||(16494258-16494305)
chr4 (123-167)||(25388268-25388312)
chr4 (173-270)||(44357195-44357294)
[»] chr8 (69 HSPs)
chr8 (124-291)||(12670250-12670429)
chr8 (124-292)||(30454097-30454277)
chr8 (162-292)||(36720749-36720881)
chr8 (162-292)||(13160655-13160786)
chr8 (174-291)||(20869560-20869677)
chr8 (162-292)||(28817676-28817808)
chr8 (162-291)||(44530103-44530234)
chr8 (162-291)||(45071219-45071349)
chr8 (124-291)||(35261633-35261814)
chr8 (124-292)||(39460994-39461178)
chr8 (165-291)||(29521738-29521866)
chr8 (123-219)||(23286336-23286432)
chr8 (162-292)||(2626472-2626607)
chr8 (162-291)||(7136577-7136710)
chr8 (123-292)||(17823529-17823712)
chr8 (124-292)||(6760776-6760959)
chr8 (173-292)||(18164821-18164941)
chr8 (162-291)||(26954086-26954220)
chr8 (162-287)||(20284119-20284250)
chr8 (162-268)||(24365109-24365218)
chr8 (162-287)||(21070747-21070879)
chr8 (311-433)||(37319461-37319582)
chr8 (162-292)||(25250475-25250609)
chr8 (191-282)||(28407379-28407471)
chr8 (162-286)||(8897814-8897940)
chr8 (124-272)||(12625862-12626025)
chr8 (173-282)||(44781567-44781677)
chr8 (123-259)||(23000227-23000365)
chr8 (173-291)||(24245405-24245520)
chr8 (161-269)||(22598133-22598243)
chr8 (124-263)||(31457155-31457307)
chr8 (163-266)||(35105902-35106008)
chr8 (162-239)||(5135339-5135418)
chr8 (162-282)||(42083748-42083870)
chr8 (162-282)||(8483988-8484109)
chr8 (180-290)||(11748254-11748366)
chr8 (162-269)||(11000999-11001109)
chr8 (165-245)||(389643-389727)
chr8 (162-236)||(5689640-5689716)
chr8 (162-228)||(29877111-29877179)
chr8 (163-282)||(14018019-14018140)
chr8 (162-221)||(19729366-19729425)
chr8 (202-266)||(30962865-30962929)
chr8 (162-290)||(44742568-44742698)
chr8 (124-227)||(20869941-20870060)
chr8 (171-292)||(40604964-40605087)
chr8 (161-234)||(17250924-17251001)
chr8 (124-167)||(26102609-26102652)
chr8 (162-222)||(43942347-43942411)
chr8 (248-292)||(23286431-23286475)
chr8 (163-221)||(10857852-10857913)
chr8 (124-167)||(27468092-27468135)
chr8 (162-200)||(26457776-26457814)
chr8 (119-167)||(13160793-13160841)
chr8 (123-167)||(16225113-16225157)
chr8 (217-289)||(31454144-31454216)
chr8 (119-167)||(44530241-44530289)
chr8 (128-167)||(18164764-18164803)
chr8 (124-167)||(19729432-19729475)
chr8 (124-166)||(16013549-16013591)
chr8 (124-166)||(29521685-29521727)
chr8 (172-267)||(36918102-36918199)
chr8 (124-161)||(10857927-10857964)
chr8 (254-291)||(42840863-42840900)
chr8 (124-160)||(7136527-7136563)
chr8 (124-160)||(25250623-25250659)
chr8 (124-160)||(26954234-26954270)
chr8 (125-165)||(27508004-27508044)
chr8 (123-167)||(30962770-30962814)
[»] chr7 (81 HSPs)
chr7 (124-291)||(21172009-21172188)
chr7 (124-292)||(32758214-32758394)
chr7 (123-292)||(48735121-48735303)
chr7 (122-284)||(10693071-10693245)
chr7 (125-294)||(42476824-42477005)
chr7 (162-292)||(2541069-2541202)
chr7 (124-263)||(42391100-42391251)
chr7 (124-291)||(42798623-42798804)
chr7 (162-291)||(47077905-47078034)
chr7 (124-292)||(42805477-42805661)
chr7 (162-291)||(43557426-43557559)
chr7 (162-291)||(46354148-46354281)
chr7 (161-280)||(19426938-19427059)
chr7 (162-284)||(11617638-11617762)
chr7 (125-266)||(11741774-11741927)
chr7 (162-283)||(27629596-27629719)
chr7 (161-291)||(2662984-2663112)
chr7 (162-291)||(47716413-47716546)
chr7 (162-271)||(33871960-33872070)
chr7 (165-292)||(34626261-34626389)
chr7 (162-282)||(23419724-23419845)
chr7 (162-292)||(35334866-35334996)
chr7 (163-291)||(13805057-13805185)
chr7 (161-291)||(22699017-22699151)
chr7 (162-285)||(40463837-40463961)
chr7 (189-290)||(18326989-18327091)
chr7 (162-290)||(8148995-8149126)
chr7 (192-292)||(42495916-42496017)
chr7 (162-269)||(19265791-19265899)
chr7 (173-292)||(12473257-12473378)
chr7 (173-290)||(5180218-5180337)
chr7 (124-245)||(31591109-31591242)
chr7 (165-269)||(19266426-19266532)
chr7 (162-282)||(28362195-28362316)
chr7 (162-282)||(48123534-48123655)
chr7 (162-269)||(14099056-14099165)
chr7 (162-269)||(14409073-14409182)
chr7 (173-287)||(14732884-14732999)
chr7 (162-293)||(28078182-28078314)
chr7 (167-268)||(6736867-6736969)
chr7 (203-291)||(7193039-7193127)
chr7 (162-269)||(29907393-29907505)
chr7 (162-244)||(7879639-7879723)
chr7 (173-270)||(7644931-7645030)
chr7 (202-286)||(7794598-7794682)
chr7 (162-245)||(18512503-18512587)
chr7 (162-259)||(18747472-18747572)
chr7 (165-262)||(32233188-32233286)
chr7 (202-291)||(21447544-21447633)
chr7 (173-269)||(16341254-16341352)
chr7 (174-285)||(1423972-1424085)
chr7 (162-226)||(38604546-38604611)
chr7 (162-270)||(39123865-39123980)
chr7 (173-282)||(3469238-3469350)
chr7 (162-269)||(44123672-44123780)
chr7 (162-254)||(38262246-38262340)
chr7 (162-233)||(1408469-1408542)
chr7 (371-427)||(11690254-11690310)
chr7 (173-245)||(35203439-35203513)
chr7 (162-220)||(35787319-35787378)
chr7 (165-241)||(15108450-15108527)
chr7 (161-269)||(42101933-42102044)
chr7 (237-288)||(29140487-29140538)
chr7 (124-166)||(36602540-36602582)
chr7 (226-267)||(11458380-11458421)
chr7 (162-270)||(22065563-22065672)
chr7 (162-195)||(27889366-27889399)
chr7 (178-294)||(43852002-43852111)
chr7 (124-167)||(7879730-7879773)
chr7 (173-241)||(21566439-21566509)
chr7 (229-288)||(25198679-25198738)
chr7 (124-167)||(45018923-45018966)
chr7 (162-229)||(23231573-23231642)
chr7 (123-160)||(47716560-47716597)
chr7 (205-269)||(1524281-1524345)
chr7 (202-294)||(5814422-5814514)
chr7 (125-165)||(18747581-18747621)
chr7 (133-165)||(21566530-21566562)
chr7 (124-164)||(27629729-27629769)
chr7 (125-157)||(29907520-29907552)
chr7 (162-194)||(36267868-36267900)
[»] chr6 (52 HSPs)
chr6 (124-291)||(1346918-1347097)
chr6 (124-291)||(1354757-1354936)
chr6 (124-294)||(29355855-29356042)
chr6 (162-281)||(12221965-12222088)
chr6 (179-292)||(8409196-8409311)
chr6 (161-289)||(3815126-3815256)
chr6 (162-292)||(9161076-9161209)
chr6 (162-267)||(28007604-28007711)
chr6 (167-290)||(13905034-13905158)
chr6 (162-291)||(1941809-1941940)
chr6 (162-286)||(2166460-2166587)
chr6 (162-286)||(2178093-2178220)
chr6 (162-291)||(15866089-15866218)
chr6 (202-292)||(14975172-14975262)
chr6 (124-227)||(25557743-25557858)
chr6 (124-227)||(26097178-26097293)
chr6 (162-259)||(23240874-23240971)
chr6 (162-260)||(18277243-18277343)
chr6 (161-287)||(20400625-20400753)
chr6 (174-291)||(6024187-6024306)
chr6 (176-269)||(12889402-12889497)
chr6 (162-272)||(14553485-14553598)
chr6 (161-240)||(33138838-33138919)
chr6 (173-282)||(7947433-7947543)
chr6 (202-288)||(12063424-12063510)
chr6 (202-287)||(24734591-24734676)
chr6 (167-268)||(32728211-32728314)
chr6 (224-291)||(33922942-33923009)
chr6 (162-292)||(22967124-22967261)
chr6 (162-292)||(23821132-23821269)
chr6 (175-272)||(27855500-27855600)
chr6 (185-263)||(4136590-4136670)
chr6 (162-281)||(24097545-24097662)
chr6 (173-269)||(2755485-2755583)
chr6 (162-287)||(23930177-23930303)
chr6 (162-235)||(32579436-32579510)
chr6 (162-245)||(15865907-15865991)
chr6 (124-167)||(12892101-12892144)
chr6 (198-281)||(19649255-19649338)
chr6 (124-159)||(25997749-25997784)
chr6 (182-245)||(17448324-17448389)
chr6 (374-427)||(7472856-7472909)
chr6 (216-272)||(8417445-8417501)
chr6 (192-253)||(17432332-17432395)
chr6 (124-167)||(6808487-6808530)
chr6 (124-167)||(13267817-13267860)
chr6 (162-267)||(32068074-32068179)
chr6 (124-166)||(12886006-12886048)
chr6 (122-156)||(17432451-17432485)
chr6 (121-166)||(383757-383802)
chr6 (122-167)||(10734903-10734948)
chr6 (176-205)||(14341134-14341163)
[»] scaffold0168 (1 HSPs)
scaffold0168 (124-291)||(30533-30712)
[»] chr2 (76 HSPs)
chr2 (124-292)||(21779261-21779441)
chr2 (162-291)||(12023969-12024099)
chr2 (123-292)||(23397719-23397900)
chr2 (162-291)||(8455366-8455497)
chr2 (124-291)||(9671134-9671314)
chr2 (123-292)||(14530271-14530456)
chr2 (124-290)||(10543653-10543835)
chr2 (161-289)||(11514392-11514522)
chr2 (162-292)||(22371010-22371139)
chr2 (165-288)||(25249791-25249915)
chr2 (173-290)||(24200686-24200805)
chr2 (175-291)||(17705449-17705567)
chr2 (162-292)||(25079767-25079900)
chr2 (167-285)||(27573581-27573700)
chr2 (162-272)||(17667975-17668087)
chr2 (162-289)||(17896215-17896345)
chr2 (177-291)||(7214488-7214604)
chr2 (162-272)||(17623537-17623649)
chr2 (165-289)||(19977767-19977893)
chr2 (162-268)||(99315-99421)
chr2 (162-267)||(5450263-5450371)
chr2 (161-269)||(23145747-23145857)
chr2 (161-269)||(23557537-23557647)
chr2 (124-254)||(10546153-10546298)
chr2 (162-254)||(14444720-14444813)
chr2 (162-291)||(5840982-5841115)
chr2 (162-260)||(25641487-25641586)
chr2 (162-269)||(21377123-21377232)
chr2 (163-291)||(26684671-26684803)
chr2 (162-271)||(39914355-39914467)
chr2 (123-270)||(40416870-40417031)
chr2 (162-290)||(32781338-32781467)
chr2 (124-229)||(36871509-36871626)
chr2 (162-265)||(17380287-17380391)
chr2 (162-282)||(4516401-4516522)
chr2 (180-290)||(14544018-14544131)
chr2 (169-281)||(24860045-24860157)
chr2 (162-269)||(33795261-33795370)
chr2 (173-269)||(29419946-29420048)
chr2 (193-272)||(44604827-44604907)
chr2 (162-267)||(31158489-31158598)
chr2 (174-256)||(19614981-19615065)
chr2 (162-270)||(44643497-44643608)
chr2 (168-251)||(2003592-2003678)
chr2 (161-221)||(40762283-40762345)
chr2 (165-269)||(44521426-44521532)
chr2 (162-268)||(45235867-45235976)
chr2 (161-230)||(30826052-30826122)
chr2 (214-282)||(35017781-35017849)
chr2 (247-292)||(39189558-39189603)
chr2 (173-236)||(15296468-15296533)
chr2 (162-260)||(31821393-31821491)
chr2 (173-256)||(44449445-44449529)
chr2 (162-244)||(13245145-13245220)
chr2 (165-205)||(25632551-25632591)
chr2 (124-167)||(22371204-22371247)
chr2 (124-167)||(34080193-34080236)
chr2 (128-167)||(39189508-39189547)
chr2 (169-230)||(30864474-30864536)
chr2 (242-291)||(27466262-27466311)
chr2 (126-167)||(41409954-41409995)
chr2 (119-167)||(8575987-8576035)
chr2 (202-290)||(17472926-17473014)
chr2 (128-167)||(124918-124957)
chr2 (124-167)||(3633708-3633751)
chr2 (163-268)||(4795730-4795839)
chr2 (202-287)||(4852306-4852388)
chr2 (124-167)||(14444820-14444863)
chr2 (162-205)||(24890453-24890496)
chr2 (172-245)||(12315712-12315786)
chr2 (125-167)||(40579750-40579792)
chr2 (123-168)||(14544157-14544202)
chr2 (124-165)||(25249738-25249779)
chr2 (124-157)||(25632611-25632644)
chr2 (124-160)||(5841129-5841165)
chr2 (165-205)||(39499283-39499323)
[»] chr5 (67 HSPs)
chr5 (124-291)||(35710267-35710446)
chr5 (124-292)||(41014272-41014453)
chr5 (162-291)||(8170034-8170163)
chr5 (124-258)||(32703411-32703557)
chr5 (124-292)||(38879534-38879718)
chr5 (162-291)||(24448844-24448975)
chr5 (182-292)||(37024626-37024736)
chr5 (162-288)||(43334159-43334290)
chr5 (162-288)||(4619154-4619284)
chr5 (162-293)||(27328704-27328839)
chr5 (162-291)||(1565385-1565517)
chr5 (165-290)||(2838733-2838860)
chr5 (162-270)||(19142993-19143102)
chr5 (173-292)||(22187238-22187359)
chr5 (165-292)||(22600407-22600536)
chr5 (162-269)||(208977-209086)
chr5 (187-292)||(23974734-23974840)
chr5 (124-288)||(22861669-22861844)
chr5 (127-230)||(7368413-7368528)
chr5 (124-262)||(1405170-1405322)
chr5 (163-261)||(1850624-1850723)
chr5 (162-260)||(22907915-22908014)
chr5 (162-269)||(28516483-28516593)
chr5 (162-285)||(30006285-30006410)
chr5 (173-286)||(31299591-31299705)
chr5 (173-282)||(39301087-39301197)
chr5 (173-253)||(42924895-42924977)
chr5 (162-242)||(43574609-43574691)
chr5 (162-236)||(13801817-13801895)
chr5 (162-223)||(7097810-7097872)
chr5 (123-206)||(34154813-34154908)
chr5 (162-280)||(12006378-12006500)
chr5 (163-220)||(16880698-16880757)
chr5 (235-291)||(19438703-19438759)
chr5 (162-247)||(41425946-41426033)
chr5 (124-167)||(16028624-16028667)
chr5 (170-265)||(34074620-34074717)
chr5 (122-167)||(30877562-30877607)
chr5 (189-250)||(22025538-22025601)
chr5 (162-221)||(29334419-29334481)
chr5 (216-262)||(9794465-9794511)
chr5 (180-270)||(18698586-18698675)
chr5 (125-167)||(19438758-19438800)
chr5 (162-226)||(20135623-20135691)
chr5 (162-269)||(24903746-24903855)
chr5 (177-282)||(10634211-10634317)
chr5 (126-162)||(11462922-11462958)
chr5 (162-267)||(24323755-24323862)
chr5 (162-267)||(24360379-24360486)
chr5 (226-282)||(39079882-39079937)
chr5 (124-167)||(16957406-16957449)
chr5 (162-268)||(3771318-3771424)
chr5 (215-272)||(17419887-17419944)
chr5 (123-167)||(1565524-1565567)
chr5 (164-230)||(5873374-5873441)
chr5 (124-167)||(24448982-24449025)
chr5 (124-167)||(25622552-25622595)
chr5 (124-167)||(32354219-32354262)
chr5 (253-292)||(41956885-41956924)
chr5 (162-268)||(4809986-4810094)
chr5 (123-160)||(13801766-13801803)
chr5 (125-166)||(29184062-29184103)
chr5 (229-270)||(31362454-31362495)
chr5 (124-160)||(4619104-4619140)
chr5 (165-205)||(9794431-9794471)
chr5 (123-167)||(16880646-16880690)
chr5 (124-156)||(43334307-43334339)
[»] scaffold0187 (4 HSPs)
scaffold0187 (162-288)||(10100-10226)
scaffold0187 (162-288)||(20428-20554)
scaffold0187 (226-292)||(8898-8964)
scaffold0187 (226-292)||(19226-19292)
[»] scaffold0223 (1 HSPs)
scaffold0223 (123-284)||(11093-11265)
[»] scaffold0258 (1 HSPs)
scaffold0258 (162-289)||(13074-13202)
[»] scaffold1176 (1 HSPs)
scaffold1176 (162-283)||(1637-1758)
[»] scaffold0057 (5 HSPs)
scaffold0057 (162-292)||(24822-24949)
scaffold0057 (124-282)||(46794-46966)
scaffold0057 (162-232)||(43672-43742)
scaffold0057 (124-167)||(43750-43793)
scaffold0057 (223-268)||(46996-47041)
[»] scaffold0005 (1 HSPs)
scaffold0005 (163-293)||(226456-226589)
[»] scaffold0036 (1 HSPs)
scaffold0036 (161-291)||(35066-35200)
[»] scaffold0311 (1 HSPs)
scaffold0311 (162-282)||(10773-10895)
[»] scaffold0049 (1 HSPs)
scaffold0049 (162-286)||(58936-59064)
[»] scaffold0015 (1 HSPs)
scaffold0015 (124-236)||(48634-48758)
[»] scaffold0254 (1 HSPs)
scaffold0254 (174-286)||(4117-4230)
[»] scaffold0024 (1 HSPs)
scaffold0024 (217-292)||(83828-83903)
[»] scaffold0194 (1 HSPs)
scaffold0194 (214-290)||(24619-24695)
[»] scaffold0031 (1 HSPs)
scaffold0031 (202-287)||(43085-43172)
[»] scaffold0018 (1 HSPs)
scaffold0018 (169-283)||(72924-73034)
[»] scaffold0167 (1 HSPs)
scaffold0167 (162-254)||(23590-23684)
[»] scaffold0116 (1 HSPs)
scaffold0116 (202-291)||(8848-8934)
[»] scaffold0180 (1 HSPs)
scaffold0180 (124-199)||(24133-24220)
[»] scaffold0867 (1 HSPs)
scaffold0867 (161-241)||(3718-3798)
[»] scaffold0028 (1 HSPs)
scaffold0028 (161-269)||(32906-33017)
[»] scaffold0954 (1 HSPs)
scaffold0954 (162-229)||(3560-3629)


Alignment Details
Target: chr3 (Bit Score: 354; Significance: 0; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 434
Target Start/End: Complemental strand, 39203794 - 39203348
Alignment:
Q  1 gtaaacataaataacttttgcataagctgtttgtttctataagttttcatgaagataaactaattcattgagaatttcaaccaaaattaactgtttcgga 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39203794 gtaaacataaataacttttgtataagctgtttgtttctataagttttcatgaagataaactaattcattgagaatttcaaccaaaattaactgtttcgga 39203695  T
Q  101 actctagagagaaactatacattaaagggcaacccggtgcactagagctcccgcatatgca------------gggtcccaccatttggtgtattgtacg 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||            |||||||||||||||||||||||||||    
T  39203694 actctagagagaaactatacattaaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacg 39203595  T
Q  189 cagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttaccc 288  Q
    || ||||||||||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||||||||||| ||| | |||||||||||||    
T  39203594 caaccttaccctgttttacacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttaccc 39203495  T
Q  289 ctcagagaa-ctatacattattattgtcaaataatgaagtgaattaaacacaggttactgctgctcttgcaaatgctgggctggaatcttctaatctcat 387  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39203494 ctcagagaaactatacattattattgtcaaataatgaagtgaattgaacacaggttactgctgctcttgcaaatgctgggctggaatcttctaatctcat 39203395  T
Q  388 tgttggaattgatttcacaaagagcaatgagtggacaggtgttatct 434  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39203394 tgttggaattgatttcacaaagagcaatgagtggacaggtgttatct 39203348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 4495676 - 4495845
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttt 221  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| |||    
T  4495676 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattt 4495775  T
Q  222 tcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||    
T  4495776 tcaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggttacccctc 4495845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 125 - 292
Target Start/End: Original strand, 7696893 - 7697067
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcagggtccca-------ccatttggtgtattgtacgcagccttaccctgttttacacaagaggct 217  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||         ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7696893 aagggaaacccggtgcactagagctcccacatatgcagtgtccgggaaggggccatttggtgtattgtacgcagccttaccctgttttacacaagagact 7696992  T
Q  218 gttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7696993 gtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttacccctca 7697067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 1217245 - 1217065
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            | ||||||||||||||||||||||||||||||||||||||||||    
T  1217245 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgttttacacaa 1217146  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||||    
T  1217145 gaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttacccctca 1217065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 125 - 287
Target Start/End: Original strand, 22122918 - 22123092
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaag 212  Q
    |||||||||||||||||||||||||| ||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaag 22123017  T
Q  213 aggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacc 287  Q
    || |||||| ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22123018 agactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgccaaggttacc 22123092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 40272812 - 40272995
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtttt--acac 209  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            ||||||||||||||||||||||||||||||||||||||  ||||    
T  40272812 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacac 40272911  T
Q  210 aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctcag 293  Q
    |||||| ||||| |||||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  40272912 aagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctcag 40272995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 46421085 - 46421218
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  46421085 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgac 46421184  T
Q  258 aacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||||| ||||||||||||||||||    
T  46421185 aacaactttaccagttgcgccaaggttacccctc 46421218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 16735547 - 16735416
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttac-acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||| ||  ||||||||||||||    
T  16735547 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttctacaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaac 16735448  T
Q  261 aactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||| |||||||||||||||||||    
T  16735447 aactttaccagttgcgccaaggttacccctca 16735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 164 - 292
Target Start/End: Original strand, 8247739 - 8247871
Alignment:
Q  164 gtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||  |||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  8247739 gtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 8247838  T
Q  260 caactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||| |||||||||||||||||||    
T  8247839 caactttaccagttgcgccaaggttacccctca 8247871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 29366770 - 29366902
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29366770 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgac 29366869  T
Q  258 aacaactttaccagtggcgccaaggttacccct 290  Q
    |||||||||||||||  ||||||||||||||||    
T  29366870 aacaactttaccagttacgccaaggttacccct 29366902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 13730602 - 13730785
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||            |||||||  ||||||||||||| |||||||||||||||||  ||    
T  13730602 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttac 13730701  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  13730702 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 13730785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 22609872 - 22609742
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| |||||  ||||||||||||||    
T  22609872 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaac 22609773  T
Q  261 aactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||| || |||||||||||||||||||    
T  22609772 aactttacc-gttgcgccaaggttacccctca 22609742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 54032571 - 54032705
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttt 221  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||| |||||    
T  54032571 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgttt 54032670  T
Q  222 tcaggacttgaacccgtgaccttttagtcacatga 256  Q
     ||||||||||||||||||||||  ||||||||||    
T  54032671 ccaggacttgaacccgtgaccttccagtcacatga 54032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 13628790 - 13628975
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgttt--tac 207  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            |||||||  ||||||||||||||||||||||||||||||  |||    
T  13628790 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttac 13628889  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac-tttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||||||||||||||||    
T  13628890 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttacccctca 13628975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 162 - 278
Target Start/End: Complemental strand, 26869813 - 26869696
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  26869813 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaac 26869714  T
Q  261 aactttaccagtggcgcc 278  Q
    |||||||||||| |||||    
T  26869713 aactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 185 - 291
Target Start/End: Original strand, 10870025 - 10870132
Alignment:
Q  185 tacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggt 283  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  10870025 tacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 10870124  T
Q  284 tacccctc 291  Q
    ||||||||    
T  10870125 tacccctc 10870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 6411872 - 6412002
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| |||||| | ||| ||||||||||    
T  6411872 gggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaagacttgaacccatgacctatcagttacatgacaac 6411971  T
Q  261 aactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||| ||| ||||||||||||||    
T  6411972 aactttaccagttgcgtcaaggttacccctc 6412002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 164 - 291
Target Start/End: Original strand, 52926271 - 52926391
Alignment:
Q  164 gtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  52926271 gtcccaccatttggtgtattgtacgcagccttac-------tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaac 52926363  T
Q  264 tttaccagtggcgccaaggttacccctc 291  Q
    ||||||||| ||||||||||||||||||    
T  52926364 tttaccagttgcgccaaggttacccctc 52926391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 12914085 - 12914216
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||||||  |||||||||  ||||||| ||||    
T  12914085 gggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaa 12914184  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| ||||||||||||||||||    
T  12914185 caactttaccagttgcgccaaggttacccctc 12914216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 26573234 - 26573103
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  26573234 gggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaa 26573135  T
Q  260 caactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||| || ||||||||| | |||||||    
T  26573134 caactttacc-gttgcgccaagggtccccctca 26573103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 31593004 - 31592878
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 31592905  T
Q  212 gaggctgttttcaggacttgaacccgt 238  Q
    |||||||||| ||||||||||||||||    
T  31592904 gaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 174 - 292
Target Start/End: Complemental strand, 9607298 - 9607178
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    |||||||||| |||||||||||||||||||||  || ||||||||||||| |||||||||||||  |||||||| |||||||||||||||||||||| ||    
T  9607298 ttggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttacaag 9607199  T
Q  272 tggcgccaaggttacccctca 292  Q
    | |||||||||||||||||||    
T  9607198 ttgcgccaaggttacccctca 9607178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 165 - 292
Target Start/End: Original strand, 45620881 - 45621010
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaaca 45620980  T
Q  262 actttaccagtggcgccaaggttacccctca 292  Q
    |||||||| || ||||||||| | |||||||    
T  45620981 actttacc-gttgcgccaaggctccccctca 45621010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 31831344 - 31831245
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtccc-accatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttt 221  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  31831344 taaagggcaacccggtgcactagagcacccgcatatgcagggtccggaccatttggtgtattgtatgcagccttaccctattttacacaagaggctgttt 31831245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 34420693 - 34420802
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  34420693 gggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgaca 34420792  T
Q  259 acaactttac 268  Q
    ||||||||||    
T  34420793 acaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 173 - 292
Target Start/End: Original strand, 5173782 - 5173903
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac-tttacca 270  Q
    |||||||||||| | ||| ||||||  |||||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |    
T  5173782 tttggtgtattgcatgcaaccttactttgtttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacga 5173881  T
Q  271 gtggcgccaaggttacccctca 292  Q
    || |||||||||||||||||||    
T  5173882 gttgcgccaaggttacccctca 5173903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 173 - 259
Target Start/End: Complemental strand, 516505 - 516417
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||| |||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  516505 tttggtttattgtgcgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 15797377 - 15797271
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||| ||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  15797377 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 15797278  T
Q  212 gaggctg 218  Q
    |||||||    
T  15797277 gaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 33926190 - 33926094
Alignment:
Q  162 gggtcccaccatt-tggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||| ||||||||||    
T  33926190 gggtcccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccaggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 53996615 - 53996737
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||| ||||| || ||||||||| |||||||||| ||||| ||||||    
T  53996615 gggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgaca 53996714  T
Q  259 acaactttaccagtggcgccaagg 282  Q
    |||| |||||| || |||||||||    
T  53996715 acaaatttacc-gtagcgccaagg 53996737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 165 - 264
Target Start/End: Complemental strand, 7943094 - 7942993
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    |||||||||||| |||||||||||||| |||||||||||||  | |||||| ||||||| ||||||||||| ||||||||||  ||||||||||||||||    
T  7943094 tcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaa 7942995  T
Q  263 ct 264  Q
    ||    
T  7942994 ct 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 12525489 - 12525385
Alignment:
Q  187 cgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggtt 284  Q
    |||||||||||||||  |||||||||||||||||||| ||||||| ||||| ||||||||| ||||| |||   |||||||||||||| |||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtcatatg---acaactttaccagttgcgccaaggtt 12525393  T
Q  285 acccctca 292  Q
    ||||||||    
T  12525392 acccctca 12525385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 30928197 - 30928302
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||| ||| |||||||||| ||| || ||||||| ||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  30928197 gggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 30928296  T
Q  260 caactt 265  Q
     |||||    
T  30928297 gaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 10795473 - 10795554
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtg 239  Q
    ||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  10795473 gggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 25944577 - 25944468
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| |||||||||||| ||||||| ||| |||||  |||| |||||| |||| |||||||||||||| |||||||| |||||| |||||    
T  25944577 gggtcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgaca 25944478  T
Q  259 acaactttac 268  Q
    ||||||||||    
T  25944477 acaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 43956472 - 43956640
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcccaccatttggtgtattgtacgcagcct--taccctgttttacacaagaggctgttt 221  Q
    |||||||| |||||||||||| |||||||||||| || |||||||||||||||||||||||| || |||||  |    | ||||||||| ||||||||||    
T  43956472 aaagggcagcccggtgcactaaagctcccgcatacgctgggtcccaccatttggtgtattgtgcgtagccttgtgtttttttttacacatgaggctgttt 43956571  T
Q  222 tcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
     ||| || |||||||  ||| ||| |||||  | |||||||||||||| || ||||||||||| ||||||    
T  43956572 ccagaacatgaaccccggacttttcagtcaagtaacaacaactttacc-gttgcgccaaggttccccctc 43956640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 47624148 - 47624087
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttt 222  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47624148 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttt 47624087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 14987116 - 14986989
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgca------------gggtcccaccatt--tggtgtattgtacgcagccttaccctg--ttttac 207  Q
    |||||| |||||||||||||| ||||||||||||||||            |||||||||||||  |||||||||||||||||||||||||||  ||||||    
T  14987116 aaagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 14987017  T
Q  208 acaagaggctgttttcaggacttgaacc 235  Q
    |||||||||||||| |||||||||||||    
T  14987016 acaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 34771364 - 34771461
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacac 209  Q
    |||||||| |||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  34771364 aaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 34771461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 45139526 - 45139624
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    ||||||||||||||  ||||||||||| |||||||||||||||  ||||||||||||| ||||| ||  ||||||||||||||||||| ||||||||||    
T  45139526 gggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 45948888 - 45949012
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgttttcaggacttgaacccgtgacct---tttagtcacatga 256  Q
    ||||||||||| ||||||||||||| ||||||||||||  | |||||||||||||| ||||| ||||| |||||||||||||||   || ||||||||||    
T  45948888 gggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccaggaattgaacccgtgaccttccttcagtcacatga 45948987  T
Q  257 caacaactttaccagtggcgccaagg 282  Q
     |||||||| ||| || |||||||||    
T  45948988 aaacaacttcacc-gttgcgccaagg 45949012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 19731110 - 19731000
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||| | ||||||||||||||| ||||||| ||||||  |||||||||||| ||| ||||||||| | ||||||||||| | |||| |||||    
T  19731110 agggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgaca 19731011  T
Q  259 acaactttacc 269  Q
    |||| ||||||    
T  19731010 acaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 33235639 - 33235526
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg---ttttacacaagaggctgttttcaggacttgaacccgtgacctttta-gtcacatgac 257  Q
    |||||||||||||| ||||||||||| ||| |||||||||   |||||||||||||||| ||| || || ||||||  ||||||||| | ||||||||||    
T  33235639 gggtcccaccatttagtgtattgtacacagtcttaccctgtttttttacacaagaggctctttacacgatttgaacttgtgacctttcatgtcacatgac 33235540  T
Q  258 aacaactttaccag 271  Q
    ||||||||||||||    
T  33235539 aacaactttaccag 33235526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 8410918 - 8411016
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||||| ||||||||||||  ||||||||||||||||||  ||| ||||| |||| |||||| |||||| ||||||||| |||| ||||||||||    
T  8410918 ggtcccaccagttggtgtattgtgagcagccttaccctgttttttacacgaggcagtttccaggacctgaaccggtgacctttcagtcccatgacaaca 8411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 53062112 - 53062036
Alignment:
Q  195 taccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    |||||||||||  ||||| |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 25517220 - 25517353
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggact--tgaacccgtgaccttttagtcacatga 256  Q
    |||||||||||||| ||||||||||||||||| || | ||||||   |||||||||| ||||| |||| |   | | || ||||||||  ||||||||||    
T  25517220 gggtcccaccattttgtgtattgtacgcagccatatcttgtttttttacacaagaggatgtttccaggtcccatcatcctgtgaccttccagtcacatga 25517319  T
Q  257 caacaactttaccagtggcgccaaggttacccct 290  Q
    |||||||||||||||| |||||||||||| ||||    
T  25517320 caacaactttaccagttgcgccaaggttatccct 25517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 19751686 - 19751576
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||| | ||||||||||||||| ||||||| ||  |||||||||||||||| ||| ||||||||| | ||||||||||| | |||| |||||    
T  19751686 agggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgaca 19751587  T
Q  259 acaactttacc 269  Q
    | || ||||||    
T  19751586 aaaaatttacc 19751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 52428527 - 52428613
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcag-gacttgaacccgtgaccttt 245  Q
    |||| |||| ||||||||||||||||||||||||||||||  ||||||||||||||||| || ||| ||||| ||||||||||||||    
T  52428527 gggttccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgaccttt 52428613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 54484848 - 54484730
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctg---ttttaca 208  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            ||||||||||||||||||||||||||||||| ||   |||||||    
T  54484848 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttaca 54484749  T
Q  209 caagaggctgttttcagga 227  Q
    ||||||||||||| |||||    
T  54484748 caagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 54374395 - 54374488
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcac 252  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||  |||||||||| ||||| || |||||||||| ||||||||| ||||||    
T  54374395 gggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 35417981 - 35417902
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaagg 282  Q
    |||||||||||||||||||| ||||| |||||| |||||||| | |||||||||| |||||||||||| || |||||||||    
T  35417981 ttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc-gttgcgccaagg 35417902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 21875111 - 21874999
Alignment:
Q  172 atttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    |||| |||||||||||||||||||||||| ||||   |||||||||| ||||| ||| | |||||||||| |       |||||||||||||||||||||    
T  21875111 atttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaacccgtca-------gtcacatgacaacaactttac 21875019  T
Q  269 cagtggcgccaaggttaccc 288  Q
    |||| ||| |||||||||||    
T  21875018 cagttgcgtcaaggttaccc 21874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 29106653 - 29106555
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||| ||||||||||||||||| | ||||| ||| ||||  |||||||||| |||||||| |||||| |||||||| |||| || ||||||||||||    
T  29106653 tcccacaatttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtgatctttgagccacatgacaaca 29106555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 30452952 - 30452909
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30452952 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 30452909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 43114917 - 43114994
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagcc-ttaccctgtttt---acacaagaggctgttttcaggacttgaac 234  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||   |||||||||||||||| ||||||||||||    
T  43114917 agggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtttccaggacttgaac 43114994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 44403605 - 44403715
Alignment:
Q  162 gggtcccaccatttggtg-tattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| ||| |||| | |||||||||||| |||  ||||||||||||||| ||  |||||||| |||| |||||||||||| ||| |||||    
T  44403605 gggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggctattcccaggactttaacctgtgaccttttagccacgtgaca 44403704  T
Q  259 acaactttacc 269  Q
    | |||||||||    
T  44403705 ataactttacc 44403715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 9276366 - 9276313
Alignment:
Q  167 ccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctg 218  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  9276366 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 34393876 - 34393810
Alignment:
Q  361 tgctgggctggaatcttctaatctcattgttggaattgatttcacaaagagcaatgagtggacaggt 427  Q
    |||||| || || |||||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  34393876 tgctggcctagagtcttctaatctcattgttggtattgattttacaaagagcaatgaatggacaggt 34393810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 39212081 - 39211992
Alignment:
Q  178 tgtattgtacgcagccttaccctgtt--ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactt 265  Q
    |||||||||||||| |||||| ||||  |||||||||||| | ||| ||||||||||||||||||| ||| |||||||| || |||||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacataacgacaactt 39211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 45786264 - 45786328
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttt 222  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  45786264 gggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttt 45786328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 55401284 - 55401195
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttag 248  Q
    |||||||||||||| |||||||| ||||||| |||| ||||||||  |||||||||||||||| |||||||||||||  || ||||||||    
T  55401284 gggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaaccgatggccttttag 55401195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 49013523 - 49013586
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttt 221  Q
    |||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  49013523 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 49013586  T

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Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 26292487 - 26292382
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||| |||||||||||||||||| |||||||||||||||||            |||| |||||||||||| |||||| | |||||||||||||||||||    
T  26292487 aaaggacaacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctgttttacacaa 26292388  T
Q  212 gaggct 217  Q
    ||||||    
T  26292387 gaggct 26292382  T

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Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 26782464 - 26782345
Alignment:
Q  171 catttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    ||||||||||||| ||  |||| ||||||| ||||  |||||||||  |||||  |||||||||| ||||||||||| | || |||||||| ||||||||    
T  26782464 catttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttac 26782365  T
Q  269 cagtggcgccaaggttaccc 288  Q
    || | ||| |||||||||||    
T  26782364 caattgcgtcaaggttaccc 26782345  T

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Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 6242285 - 6242328
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  6242285 aaagggcaacccggtgcactagagctcctgcatatgcagggtcc 6242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 28905041 - 28904941
Alignment:
Q  172 atttggtgtattgtacgcagccttaccctgtt---ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    |||||||||| ||||| ||| |||||| ||||   ||||||||||| |||||  | |||||| |||  ||||| ||||||||||||||||||||||||||    
T  28905041 atttggtgtaatgtacacagtcttaccttgttattttacacaagagactgttccctggacttaaacatgtgactttttagtcacatgacaacaactttac 28904942  T
Q  269 c 269  Q
    |    
T  28904941 c 28904941  T

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Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 31904907 - 31904975
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggac 228  Q
    |||||||||||||||||||||||||||||| | |||||||  ||||||| || ||||||||| ||||||    
T  31904907 gggtcccaccatttggtgtattgtacgcagtcataccctgttttttacataataggctgtttccaggac 31904975  T

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Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 10484611 - 10484659
Alignment:
Q  119 acattaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  10484611 acataaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 10484659  T

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Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 24851301 - 24851340
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagg 163  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  24851301 aaagggcaacccggtgcactaaagctcccgcatatgcagg 24851340  T

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Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 47624256 - 47624213
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  47624256 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 47624213  T

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Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 353399 - 353444
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt 205  Q
    |||||||||||||  |||||||||||||||||||||||||||||||    
T  353399 gggtcccaccattattggtgtattgtacgcagccttaccctgtttt 353444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 516569 - 516527
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    ||||||||||||||||||||| |||||||||||| ||||||||    
T  516569 aaagggcaacccggtgcactaaagctcccgcatacgcagggtc 516527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 24577992 - 24577950
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  24577992 aaagggcaatccggtgcactagagctcccgtatatgcagggtc 24577950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 24578082 - 24578040
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  24578082 aaagggcaacccggtgcactagagttcccgcatatgtagggtc 24578040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 353351 - 353392
Alignment:
Q  126 agggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtcc 353392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 40390398 - 40390357
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt 165  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  40390398 aaagggcaacccggtgcactaaagctcccgcatacgcagggt 40390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 9276289 - 9276249
Alignment:
Q  252 catgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  9276289 catgacaacaactttactagttgcgccaaggttacccctca 9276249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 1121286 - 1121382
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtt--ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttta 267  Q
    ||||||||||||||||||| || ||| | ||  |||||||||| | ||||| |||||||| ||| |||||||||| || |||  |||||||| ||||    
T  1121286 tttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctttcagccaccggacaacaaattta 1121382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 5173719 - 5173752
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcata 157  Q
    ||||||||||||||||||||| ||||||||||||    
T  5173719 aaagggcaacccggtgcactaaagctcccgcata 5173752  T

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Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 14266372 - 14266413
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt 165  Q
    |||||||||||| |||||||| |||||||||||| |||||||    
T  14266372 aaagggcaacccagtgcactaaagctcccgcatacgcagggt 14266413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 23871455 - 23871418
Alignment:
Q  251 acatgacaacaactttaccagtggcgccaaggttaccc 288  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  23871455 acatgacaacaactttactagttgcgccaaggttaccc 23871418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 16130385 - 16130318
Alignment:
Q  160 cagggtcccaccattt-ggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttca 224  Q
    |||||||||||||||| |||||||||| |||||||||| ||||  ||||||| |||| | ||||||||    
T  16130385 cagggtcccaccattttggtgtattgttcgcagccttatcctgctttttacagaagacgatgttttca 16130318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 39430513 - 39430465
Alignment:
Q  243 ttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||| |||||| ||||||||||||| ||| ||| ||||||||||    
T  39430513 ttttagtcagatgacagcaactttaccagttgcgtcaaagttacccctc 39430465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 49013473 - 49013509
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  49013473 aaagggcaacccggtgcactaaagctcccgcgtatgc 49013509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 50625005 - 50625064
Alignment:
Q  164 gtcccaccatttggtgtattgtacgcagccttaccctgttt--tacacaagaggctgttt 221  Q
    |||||||||  |||||||||||||||  ||||||||| |||  |||||||||||||||||    
T  50625005 gtcccaccaaatggtgtattgtacgctaccttacccttttttatacacaagaggctgttt 50625064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 55401024 - 55400996
Alignment:
Q  241 ccttttagtcacatgacaacaactttacc 269  Q
    |||||||||||||||||||||||||||||    
T  55401024 ccttttagtcacatgacaacaactttacc 55400996  T

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Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 96)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 34725098 - 34725279
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||            |||||||||| |||||||||||||||||||||||||||||||||||    
T  34725098 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgttttacacaa 34725197  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctcag 293  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  34725198 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctcag 34725279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 38478282 - 38478461
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  38478282 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgttttacacaa 38478381  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  38478382 gaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttacccctc 38478461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 32632607 - 32632737
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  32632607 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaac 32632706  T
Q  261 aactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||| ||||||||||||||||||    
T  32632707 aactttaccagttgcgccaaggttacccctc 32632737  T

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Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 45812541 - 45812716
Alignment:
Q  128 ggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 215  Q
    ||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||||||||||| |||||||||||||     
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctcttttacacaagaga 45812640  T
Q  216 ctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  45812641 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccctc 45812716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 47214617 - 47214488
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||    
T  47214617 gggtcccaccatttggtgtattgtacgcaaccttaccctgttttaaacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 47214518  T
Q  262 actttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||| ||||||| ||||||||||    
T  47214517 actttaccagttgcgccaaagttacccctc 47214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 14617196 - 14617014
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtt--ttacac 209  Q
    |||||| |||||||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||| ||||||| ||||  ||||||    
T  14617196 aaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacac 14617097  T
Q  210 aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  14617096 aagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccctca 14617014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 124 - 287
Target Start/End: Complemental strand, 19414595 - 19414420
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||| ||||||||||| ||    
T  19414595 aaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgttttacataa 19414496  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacc 287  Q
    |||||| |||  |||||||||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||||    
T  19414495 gaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttaccaattacgccaaggttacc 19414420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 46248003 - 46248134
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| || |||||||||||||||| ||| |||||||||||||    
T  46248003 gggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaa 46248102  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| | ||||||||||||||||    
T  46248103 caactttaccagttgagccaaggttacccctc 46248134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 18944753 - 18944620
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||| ||||||||| |||||||||||    
T  18944753 gggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgac 18944654  T
Q  258 aacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||||| ||||||||||||||||||    
T  18944653 aacaactttaccagttgcgccaaggttacccctc 18944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 30395776 - 30395903
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  30395776 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgac 30395875  T
Q  258 aacaactttaccagtggcgccaaggtta 285  Q
    ||||||||||||||| ||||||||||||    
T  30395876 aacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 46991912 - 46991781
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||| |||||||||||| |||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||  |||||||||||||    
T  46991912 gggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaa 46991813  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| || |||||||||||||||    
T  46991812 caactttaccagttgcaccaaggttacccctc 46991781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 22930119 - 22930248
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||| | || |||||||||||||| |||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  22930119 gggtcccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaac 22930217  T
Q  261 aactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||| ||||||||||||||||||    
T  22930218 aactttaccagttgcgccaaggttacccctc 22930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 41319856 - 41319988
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||| |||||||| |||| ||||||||| |||||||||||||    
T  41319856 gggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaa 41319955  T
Q  260 caactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||| | | |||||||||||||||    
T  41319956 caactttaccagttgtgtcaaggttacccctca 41319988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 20004090 - 20004273
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc------------ccaccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| ||||||||||||||| |||||            ||||||||  |||||||||||||||||||||||| ||||||  ||    
T  20004090 aaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttac 20004189  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    || ||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||    
T  20004190 acgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 20004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 12126887 - 12127010
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||| | | |||||||||||    
T  12126887 gggtcccacaatttggtgtattgtacgcagccttaccctgttttacacaagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaaca 12126986  T
Q  262 actttaccagtggcgccaaggtta 285  Q
    ||||||| ||| ||||||||||||    
T  12126987 actttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 23768372 - 23768498
Alignment:
Q  164 gtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| || |||||||||| ||||||||  |||||||||||||||    
T  23768372 gtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaaca 23768471  T
Q  262 actttaccagtggcgccaaggttaccc 288  Q
    ||||||||||| ||| | |||||||||    
T  23768472 actttaccagttgcgtcgaggttaccc 23768498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 124 - 254
Target Start/End: Original strand, 35253187 - 35253329
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||| ||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  35253187 aaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 35253286  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    ||||||||||  ||||||||||||||||| |||| ||||||||    
T  35253287 gaggctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 27201757 - 27201623
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    ||||||||||||||  |||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  27201757 gggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgac 27201658  T
Q  258 aacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||| |  ||| ||||||||||||||    
T  27201657 aacaactttaccatttacgctaaggttacccctca 27201623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 18724595 - 18724704
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||  |||||||||||||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  18724595 gggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 18724694  T
Q  260 caactttacc 269  Q
    ||||||||||    
T  18724695 caactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 10668385 - 10668197
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcaggg------------tcccaccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| |||||||||||| ||||||            ||||||||||  |||||||||||||||| ||||||| ||||||  ||    
T  10668385 aaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttac 10668286  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttag-----tcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||| ||||||||||||||||||||||| ||     |||||||||||||||||||||||| ||||||||||||||||||    
T  10668285 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaaggttacccctc 10668197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 27474388 - 27474257
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||  |||||||||||||||| || ||||||||| ||||||||| |||||| || |||||||||| ||||||||| ||||||||||||||    
T  27474388 gggtcccaccattcagtgtattgtacgcagctttgccctgtttttacacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaac 27474289  T
Q  261 aactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||| | || ||||||||||||||    
T  27474288 aactttaccagttgagctaaggttacccctca 27474257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 6925208 - 6925096
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||  |||||||||||| ||| ||||||||||||||||||||||  |||||||||||||    
T  6925208 gggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaa 6925109  T
Q  260 caactttaccagt 272  Q
    |||||||||||||    
T  6925108 caactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 8197151 - 8197019
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||| ||||||||||||| |||||| ||||||||| ||||||  |||||||||||  ||  ||||||||||||||||||||||| |||||||||||||    
T  8197151 gggtcctaccatttggtgtactgtacgtagccttaccatgttttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaa 8197052  T
Q  260 caactttaccagtggcgccaaggttacccctca 292  Q
    |||||| |||||| || ||||||||||||||||    
T  8197051 caacttgaccagttgcaccaaggttacccctca 8197019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 166 - 291
Target Start/End: Original strand, 4430080 - 4430207
Alignment:
Q  166 cccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||  ||||||||| ||||| |||||||||||||  |||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaac 4430179  T
Q  264 tttaccagtggcgccaaggttacccctc 291  Q
    ||||||||  |||||||| ||| |||||    
T  4430180 tttaccagctgcgccaagattaaccctc 4430207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 33223092 - 33222971
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||| || ||||| || ||||||||||| |||||||||||||    
T  33223092 gggtcccaccattttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaa 33222993  T
Q  260 caactttaccagtggcgccaag 281  Q
    |||||||||| || ||||||||    
T  33222992 caactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 286
Target Start/End: Complemental strand, 45402204 - 45402077
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagc-ctt--accctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    ||||||||||||||||||||||||||||||  |||  |||||||||| |||||||||||||||| |||||||||||||||| |||||  | |||||||||    
T  45402204 gggtcccaccatttggtgtattgtacgcagaacttgaaccctgtttttacacaagaggctgtttccaggacttgaacccgttaccttcca-tcacatgac 45402106  T
Q  258 aacaactttaccagtggcgccaaggttac 286  Q
    ||||||||||||||| |||||||||||||    
T  45402105 aacaactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 124 - 269
Target Start/End: Original strand, 50760240 - 50760385
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcccaccatttggtgtattgtacgcagccttaccctgtttta--cacaagaggctgttt 221  Q
    |||||||| ||||||||| || |||||||||||| ||||||| |      |||||||||| ||||||||||||||| ||||||  |||||||||||||||    
T  50760240 aaagggcagcccggtgcattaaagctcccgcatacgcagggttcggga--ttggtgtattatacgcagccttacccagttttatacacaagaggctgttt 50760337  T
Q  222 tcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||    
T  50760338 tcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 2435836 - 2435958
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||  ||||| |||||||||| ||||||||||||||||||||||| |||||| |||||    
T  2435836 gggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgaca 2435935  T
Q  259 acaactttaccagtggcgccaagg 282  Q
    ||||||||||| || |||||||||    
T  2435936 acaactttacc-gttgcgccaagg 2435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 6983861 - 6983969
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||||||||||||||||||||||||  |||||||||||||  | | |||||||||| ||||||||||||| ||||||||| |||||| ||||||||    
T  6983861 gggtcccaccatttggtgtattgtacgcatacttaccctgttttttatacgaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaaca 6983960  T
Q  262 actttacca 270  Q
    |||||||||    
T  6983961 actttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 11596620 - 11596512
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||  |||||||||||||||||| ||| |||||||||||| |    
T  11596620 gggtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagc 11596521  T
Q  261 aactttacc 269  Q
     ||||||||    
T  11596520 cactttacc 11596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 24564492 - 24564322
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtccca--ccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 219  Q
    |||||||||||||||||||||  ||||| ||||| ||||||||| |  |||||||||| |||||||||| ||||||||||||||  |||||||||| |||    
T  24564492 aaagggcaacccggtgcactaacgctcctgcataggcagggtccaagaccatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgt 24564393  T
Q  220 tttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccct 290  Q
    || || |||||||| | | ||||||| | ||||| |||| |||||||||  || |||||||||||||||||    
T  24564392 ttccaagacttgaatctgcgacctttcaatcacaagacatcaactttactggttgcgccaaggttacccct 24564322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 25468314 - 25468421
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||| |||||||||||||||||||||| ||||||||||  |||||||||||||| ||||| |||||||||||||| |||||||| | ||||||||||||    
T  25468314 ggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaac 25468413  T
Q  261 aactttac 268  Q
    ||||||||    
T  25468414 aactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 35117829 - 35117927
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  35117829 tttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 19932803 - 19932934
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||  |||||| ||| ||| | ||  |||||||||| |||||||| |||||||||||    
T  19932803 gggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa-aggttgtatcca--acttgaacccatgacctttcagtcacatgac 19932899  T
Q  258 aacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||||| |||||||||| ||||||||    
T  19932900 aacaactttaccagttgcgccaaggtaacccctca 19932934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 17470407 - 17470505
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| ||||| || |||||| ||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 162 - 294
Target Start/End: Original strand, 44485159 - 44485292
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||| |||||||||||||||||||||||||||||| |||  |||||||||| || ||||| |||||||  |||||||||||||| | |||||||||||    
T  44485159 gggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacctttcaatcacatgacaa 44485258  T
Q  260 caactttaccagtggcgccaaggttacccctcaga 294  Q
    |||||||| | || ||||||||| | |||||||||    
T  44485259 caacttta-ctgttgcgccaaggctccccctcaga 44485292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 18742007 - 18742137
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttc-aggacttgaacccgtgaccttttagtcacatg 255  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||   | |||| || |||||| | | || |||||||| |||||||| |||||||||    
T  18742007 gggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttatacaaaagactgtttcccaagatttgaacccttgacctttcagtcacatg 18742106  T
Q  256 acaacaactttaccagtggcgccaaggttac 286  Q
    ||||||||||||||||| |||||||||||||    
T  18742107 acaacaactttaccagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 20036329 - 20036218
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgt---tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||| |||||||||||||||||| |||||  |||||||| |   ||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||    
T  20036329 gggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgaca 20036230  T
Q  259 acaactttacca 270  Q
    ||||||||||||    
T  20036229 acaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 35005233 - 35005139
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcac 252  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  35005233 gggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 9939571 - 9939443
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgttt--tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    ||||||||||||||  ||||||||| ||||| ||||||| |||||  || |||||||| ||||| |||||||||||| |||||||||| |||||||||||    
T  9939571 gggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgac 9939472  T
Q  258 aacaac-tttaccagtggcgccaaggtta 285  Q
    |||||| |||||| || ||||||||||||    
T  9939471 aacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 22327196 - 22327101
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttt 266  Q
    ||||||| || |||| |||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  22327196 tttggtgcatcgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 34714675 - 34714599
Alignment:
Q  216 ctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||| || |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  34714675 ctgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttacccctca 34714599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 25290244 - 25290143
Alignment:
Q  191 gccttaccctgtttt--acacaagaggctgtttt--caggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttac 286  Q
    |||||||||||||||  |||||||||||||| ||  || ||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  25290244 gccttaccctgttttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttac 25290145  T
Q  287 cc 288  Q
    ||    
T  25290144 cc 25290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 258
Target Start/End: Original strand, 31272381 - 31272522
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------caccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggc 216  Q
    |||||||| ||| || ||||| |||||||||||| |||||||||      ||||||||| |||  |||||||||||||||| |||||| ||||||||||     
T  31272381 aaagggcagcccagtccactaaagctcccgcatacgcagggtccggaacccaccatttgatgtgctgtacgcagccttaccatgtttttacacaagaggt 31272480  T
Q  217 tgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||| ||||||||||||| ||||||||| |||||| |||||    
T  31272481 tgtttccaggacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 50812037 - 50811926
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    |||||||||||||||||| ||||||||||||||   |||||||| ||||||| |||||| |||  ||||||||||| |||||| ||||||||||||||||    
T  50812037 tttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T
Q  270 agtggcgccaagg 282  Q
     || |||||||||    
T  50811937 -gttgcgccaagg 50811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 40424786 - 40424721
Alignment:
Q  224 aggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccc 289  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttacccc 40424721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 35019338 - 35019217
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||| ||||||||||||| |||||||||  |||  ||||| |||||||| ||||| ||||||||||| | ||||||||| |||||  ||||||    
T  35019338 gggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttgtttacaggacttgaatctgtgacctttcagtcatgtgacaa 35019239  T
Q  260 caactttaccagtggcgccaagg 282  Q
    |||||||||| || |||||||||    
T  35019238 caactttacc-gttgcgccaagg 35019217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 19701667 - 19701570
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    ||||||||||||||| || |||||||  |||||  ||||||||||||||||||| ||||| |||||||||| ||| ||||||| ||||||||||||||    
T  19701667 tttggtgtattgtacccatccttaccaagttttttacacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 31382264 - 31382330
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcagga 227  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  31382264 gggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 10378785 - 10378884
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||        ||| |||||||||||||||| |||||| |||||| ||||||||    
T  10378785 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-ctca-------ctttccaggacttgaacccgtaacctttcagtcacgtgacaaca 10378876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 18335337 - 18335465
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||| |||||| ||||||||||||| | |||||||   ||||| ||||||| |||||| |||||||| |||  ||||||||| || |||||||||    
T  18335337 agggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacatgaca 18335436  T
Q  259 acaactttaccagtggcgccaaggttacc 287  Q
    | ||||||| || | ||||||||||||||    
T  18335437 aaaactttatcacttgcgccaaggttacc 18335465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 2435985 - 2436052
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  2435985 ttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 4349797 - 4349703
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtttt 205  Q
    |||||||||||||||||||||| |||||||||||| |||||||||            ||||||||||||||||||||||||||||||||||||||    
T  4349797 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 4349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 14987989 - 14988081
Alignment:
Q  182 ttgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt 272  Q
    ||||||||||||||| |||||  |||||| ||||  |||||||||||||||||||  ||||| || |||||| ||||||||||||||||||||    
T  14987989 ttgtacgcagccttatcctgtattttacataagatactgttttcaggacttgaacttgtgactttctagtcatatgacaacaactttaccagt 14988081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 52910319 - 52910216
Alignment:
Q  169 accatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactt 265  Q
    |||||| |||||||||||| ||| | |||||||||||   ||  |||||||||||| || || ||||||| ||||||||| |||||||||||||||||||    
T  52910319 accattaggtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactt 52910220  T
Q  266 tacc 269  Q
    ||||    
T  52910219 tacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 22324989 - 22324925
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcaggacttgaaccc 236  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 15511210 - 15511311
Alignment:
Q  173 tttggtgtattgta--cgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    ||||||||||||||  |||||||||||||||||||  ||||||||||| |||| |||||||| ||   ||||||||| || ||||| |||||||||||||    
T  15511210 tttggtgtattgtatccgcagccttaccctgttttttacacaagaggcggtttccaggacttcaatatgtgacctttcagccacattacaacaactttac 15511309  T
Q  269 ca 270  Q
    ||    
T  15511310 ca 15511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 23371231 - 23371124
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccc-tgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||| ||||||||||||||||| || |||| ||| | |||||| |||| ||||||||  |||||||||||||||||||||| |||||   || |||    
T  23371231 gggtcccagcatttggtgtattgtacacaaccttgcccgttttttacccaagtggctgtttctaggacttgaacccgtgacctttcagtcatgcgaaaac 23371132  T
Q  261 aactttac 268  Q
    ||||||||    
T  23371131 aactttac 23371124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 27136701 - 27136811
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||  ||| |||||||| |||| ||||  | |||| |||||    
T  27136701 gggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacgtgaca 27136800  T
Q  259 acaactttacc 269  Q
    |||||||||||    
T  27136801 acaactttacc 27136811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 39215027 - 39215117
Alignment:
Q  180 tattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    |||||||||||||||||||| |||||  |||||||||| ||||| ||| ||||||||  | |||||||||||||| |||||| ||||||||    
T  39215027 tattgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaacttgggaccttttagtcacgtgacaataactttac 39215117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 25554800 - 25554882
Alignment:
Q  189 cagccttaccctgttt-tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    ||||| |||| ||||| ||||||||||| ||||| |||||||| ||| |||| |||||||||||| |||||||||||||||||    
T  25554800 cagccctaccgtgtttctacacaagaggttgtttccaggacttaaacacgtggccttttagtcacgtgacaacaactttacca 25554882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 10163825 - 10163736
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||| |||||| ||||||||| |||| |||  || || |||||| |||||||||||||||||| |||| ||||||| ||||||||||    
T  10163825 ttttacataagaggttgttttcagaacttaaacttgtaacattttagccacatgacaacaactttatcagttgcgccaatgttacccctc 10163736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 290
Target Start/End: Original strand, 18335914 - 18336026
Alignment:
Q  180 tattgtacgcagccttaccctgtt--ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgc 277  Q
    ||||||||||||||||||||||||  ||| |||| ||  | ||||||| ||||||||  ||||||||| || |||||| ||||||||||| || | ||||    
T  18335914 tattgtacgcagccttaccctgttctttaaacaatagattattttcagaacttgaacatgtgacctttcagacacatggcaacaactttatcacttgcgc 18336013  T
Q  278 caaggttacccct 290  Q
    |||| ||||||||    
T  18336014 caagattacccct 18336026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 50606561 - 50606518
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  50606561 aaagggcaacccggtgcactaaagctcccgcatatgcagggtcc 50606518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 290
Target Start/End: Complemental strand, 21723727 - 21723642
Alignment:
Q  204 ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccct 290  Q
    |||||||||||||||||| ||||||| ||||  || ||| |  |||||||||||||||||||||||||| | || ||||||||||||    
T  21723727 ttacacaagaggctgtttccaggact-gaacttgtaaccatccagtcacatgacaacaactttaccagttgtgcgaaggttacccct 21723642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 19974136 - 19974221
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||||||| |||| |||| |||| ||||  |||||||||| || ||||||||||||||| |||| |||||| ||||    
T  19974136 tttggtgtattgtacgcaaccttgccctatttttacacttgaggctgtttccaagacttgaacccgtgatctttcagtcacgtgac 19974221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 34679274 - 34679378
Alignment:
Q  167 ccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaact 264  Q
    |||||||||| ||||| |||||||| |||||||||  |||||||||||||| |||||  |||| | ||||  ||||  ||| ||||||||||||| ||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctaggaatggaacatgtgatatttcagtcacatgacaataact 34679373  T
Q  265 ttacc 269  Q
    |||||    
T  34679374 ttacc 34679378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 15505672 - 15505632
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgt 202  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  15505672 gggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 21910699 - 21910742
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt 205  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  21910699 gggtcccaccatttggtgtattgtacgcaaccttaccctatttt 21910742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 23796573 - 23796507
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcagg 226  Q
    ||||| ||||||||||||||||||||||| ||||||  ||  |||||||||||||||||||| ||||    
T  23796573 gggtctcaccatttggtgtattgtacgcaaccttacattgatttttacacaagaggctgtttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 45264449 - 45264535
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttta--cacaagaggctgttttcaggacttgaacccgtgaccttt 245  Q
    |||||||||||||| ||||||||| || ||||||||| |||||||   ||||||||| ||||| ||||||||||||  |||||||||    
T  45264449 gggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccaggacttgaacatgtgaccttt 45264535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 267
Target Start/End: Original strand, 19656154 - 19656263
Alignment:
Q  161 agggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    ||||||| ||||||| ||||||||||||  ||| ||||| ||||||  |||||||||||||||| || | ||||| |  ||||||||| ||||||  |||    
T  19656154 agggtcctaccattttggtgtattgtacatagcgttaccatgttttttacacaagaggctgtttccaagccttgagctagtgacctttgagtcacgcgac 19656253  T
Q  258 aacaacttta 267  Q
    ||||||||||    
T  19656254 aacaacttta 19656263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 43768247 - 43768205
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttt 204  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  43768247 gggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 44745854 - 44745900
Alignment:
Q  181 attgtacgcagccttaccctgttttacacaagaggctgttttcagga 227  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||    
T  44745854 attgtacgcagctttaccttgttttacacaagaggctgtttccagga 44745900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 21723784 - 21723731
Alignment:
Q  169 accatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgttt 221  Q
    ||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||    
T  21723784 accatttggtgtattgtactcagccttaccctatttttatacaagaggctgttt 21723731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 22151568 - 22151495
Alignment:
Q  204 ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgc 277  Q
    ||||| |||||||||||| ||| |||||||||  |||||||  ||||| ||||||||||||||| |||| ||||    
T  22151568 ttacataagaggctgtttccagaacttgaacctatgaccttacagtcagatgacaacaactttatcagttgcgc 22151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 30682920 - 30682845
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccg 237  Q
    ||||||||||||||| ||||| |||| ||  |||||| |||||| |||||||||||| ||||||||| |||||||||    
T  30682920 gggtcccaccatttgttgtat-gtacacaatcttaccttgtttttacacaagaggctattttcaggatttgaacccg 30682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 31442439 - 31442483
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt 205  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  31442439 gggtcccaccattttggtgtattgtacgcatccttaccctgtttt 31442483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 1517361 - 1517404
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt 205  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||    
T  1517361 gggtcccaccaattggtgtattgtacgcagccttatcatgtttt 1517404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 9939622 - 9939579
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||| |||||||||||||| |||||||||||| |||||||||    
T  9939622 aaagggtaacccggtgcactaaagctcccgcatacgcagggtcc 9939579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 19386576 - 19386619
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||    
T  19386576 aaagagcaacctggttcactagagctcccgcatatgcagggtcc 19386619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 27474438 - 27474395
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||    
T  27474438 aaagggcaatccggtgcactaaagctcccgcatacgcagggtcc 27474395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 34149010 - 34149076
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttt--tacacaagaggctgttttcagg 226  Q
    ||||| ||||||||||| | ||||||||| ||||||||| |||  ||||||||||||||||| ||||    
T  34149010 gggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttccagg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 35005283 - 35005240
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||    
T  35005283 aaagggcaacccggtgcactaaagcgcccgcatacgcagggtcc 35005240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 165
Target Start/End: Complemental strand, 42432267 - 42432228
Alignment:
Q  126 agggcaacccggtgcactagagctcccgcatatgcagggt 165  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  42432267 agggcaatccggtgcactagagctccagcatatgcagggt 42432228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 45402251 - 45402212
Alignment:
Q  127 gggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtc 45402212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 1517311 - 1517353
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||    
T  1517311 aaagggcaacccggtgcactaaagctcctgcatacgcagggtc 1517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 23796623 - 23796581
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    |||||||| |||||||||||| |||||| ||||||||||||||    
T  23796623 aaagggcagcccggtgcactaaagctccagcatatgcagggtc 23796581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 43768210 - 43768168
Alignment:
Q  216 ctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||    
T  43768210 ctgtttccaggacttgaacccgtgacctttcagtgacatgaca 43768168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 46859173 - 46859131
Alignment:
Q  164 gtcccaccattt-ggtgtattgtacgcagccttaccctgtttt 205  Q
    |||||||||||| |||||||||||||||| |||||||||||||    
T  46859173 gtcccaccattttggtgtattgtacgcagtcttaccctgtttt 46859131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 166
Target Start/End: Complemental strand, 47214655 - 47214625
Alignment:
Q  136 ggtgcactagagctcccgcatatgcagggtc 166  Q
    |||||||||||||||||||||||||||||||    
T  47214655 ggtgcactagagctcccgcatatgcagggtc 47214625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 49722641 - 49722726
Alignment:
Q  180 tattgtacgcagccttaccctgtt-ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaact 264  Q
    |||||||||||  |||||||| || ||  |||||||| ||||| || ||||| |||||||||||||| | |||| |||||||||||    
T  49722641 tattgtacgcaatcttaccctattattttacaagaggttgtttacatgacttaaacccgtgacctttcattcacgtgacaacaact 49722726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 18944804 - 18944760
Alignment:
Q  124 aaagggcaacccggtgcact-agagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||||| | |||||||||||| |||||||||    
T  18944804 aaagggcaacccggtgcactaaaagctcccgcatacgcagggtcc 18944760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 21006185 - 21006125
Alignment:
Q  227 acttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacc 287  Q
    |||||||||  |||||||| |||| ||||||||||| |||||| || ||| ||||||||||    
T  21006185 acttgaacctttgacctttcagtcgcatgacaacaattttaccggttgcgtcaaggttacc 21006125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 30395726 - 30395762
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    |||||||||| |||||||||| |||||||||||||||    
T  30395726 aaagggcaactcggtgcactaaagctcccgcatatgc 30395762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 46991959 - 46991919
Alignment:
Q  127 gggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||| ||||||| |||| |||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtcc 46991919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 48598825 - 48599005
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgca------------gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    |||||||||||||||||||||||||||| |||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48598825 aaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 48598924  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  48598925 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 48599005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 20225117 - 20224937
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 20225018  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  20225017 gaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 20224937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 11054148 - 11054327
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            | |||||||||||||||||||||| |||||||||||||||||||    
T  11054148 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgttttacacaa 11054247  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  11054248 gagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 11054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 47528530 - 47528709
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||| ||||| ||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  47528530 aaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 47528629  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  47528630 gaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 47528709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 5648343 - 5648212
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  5648343 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaac 5648244  T
Q  261 aactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||| |||||||||||||||||||    
T  5648243 aactttaccagttgcgccaaggttacccctca 5648212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 163 - 292
Target Start/End: Original strand, 6430677 - 6430807
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  6430677 ggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaaca 6430776  T
Q  262 actttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||| |||||||||||||||||||    
T  6430777 actttaccagttgcgccaaggttacccctca 6430807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 5306714 - 5306845
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |    
T  5306714 gggtcccaccatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatc 5306813  T
Q  261 aactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||| |||||||||||||||||||    
T  5306814 aactttaccagttgcgccaaggttacccctca 5306845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 124 - 294
Target Start/End: Complemental strand, 30639514 - 30639331
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtttt-acaca 210  Q
    |||||||||||| |||||||| ||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||| |||||    
T  30639514 aaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacaca 30639415  T
Q  211 agaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctcaga 294  Q
    |||| |||||| ||||||||||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  30639414 agagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttacccctcaga 30639331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 124 - 267
Target Start/End: Original strand, 9832313 - 9832468
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    |||||||||||||||||||||||| ||| |||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  9832313 aaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 9832412  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttta 267  Q
    |||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  9832413 gaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 16911649 - 16911519
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||  ||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  16911649 gggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgac 16911550  T
Q  258 aacaactttaccagtggcgccaaggttaccc 288  Q
    ||||||||||||||| |||||||||||||||    
T  16911549 aacaactttaccagttgcgccaaggttaccc 16911519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 40915910 - 40915802
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  40915910 tcccaccatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaac 40915811  T
Q  264 tttaccagt 272  Q
    |||||||||    
T  40915810 tttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 128 - 264
Target Start/End: Original strand, 39077800 - 39077948
Alignment:
Q  128 ggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaagagg 215  Q
    ||||||||||||||||||||||||||||||||||||||||            ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  39077800 ggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgttttacacaagagg 39077899  T
Q  216 ctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaact 264  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  39077900 ctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 124 - 284
Target Start/End: Original strand, 16408601 - 16408777
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||            |||||||  ||||||||||||||||| |||||||||||||  ||    
T  16408601 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttac 16408700  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggtt 284  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||    
T  16408701 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 14590922 - 14590789
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||| ||||||||| ||||||||||||||||||   | ||||||||||||||  |||||||||| ||||||||||| |||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaa 14590823  T
Q  260 caactttaccagtggcgccaaggttacccctcag 293  Q
    ||||||||||||| |||||||||||||| |||||    
T  14590822 caactttaccagttgcgccaaggttaccactcag 14590789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 29207900 - 29208039
Alignment:
Q  126 agggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaaga 213  Q
    ||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaaga 29207999  T
Q  214 ggctgttttcaggacttgaacccgtgaccttttagtcaca 253  Q
    |||  ||| ||||||||||||||||||||||| |||||||    
T  29208000 ggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 23501924 - 23501747
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| ||||||||||||||||||||||            |||||||  |||||||||||||||| ||||||||||||||  ||    
T  23501924 aaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttac 23501825  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||      |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  23501824 acaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 23501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 21647051 - 21646918
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||| ||||||||||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||||||||  |||||||||||    
T  21647051 gggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtcacatgac 21646952  T
Q  258 aacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||||| |||||||||||| |||||    
T  21646951 aacaactttaccagttgcgccaaggttatccctc 21646918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 17043444 - 17043549
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||    
T  17043444 gggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaa 17043543  T
Q  260 caactt 265  Q
    ||||||    
T  17043544 caactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 37494936 - 37494805
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||  |||||||||| ||||| ||||||||||||| ||||||||| |||| |||| |||    
T  37494936 gggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaa 37494837  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| || |||||||||||||||    
T  37494836 caactttaccagttgcaccaaggttacccctc 37494805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 8473672 - 8473790
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||  |||||   |||| |||||||||    
T  8473672 gggtcccaccatttggtgtattgtatgcagccttaccctgttaaacacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaaca 8473771  T
Q  262 actttaccagtggcgccaa 280  Q
    ||||||||||| |||||||    
T  8473772 actttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 19027933 - 19027823
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  |||||||| | ||||| ||||||||||||||||||||||| |||||| ||||||    
T  19027933 gggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtcacgtgacaa 19027834  T
Q  260 caactttacca 270  Q
    ||||| |||||    
T  19027833 caactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 123 - 272
Target Start/End: Original strand, 44363129 - 44363294
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccattt--ggtgtattgtacgcagccttaccctgtttt--a 206  Q
    |||||||||||||||||||||| |||||||||||| |||||||||            ||||||||  ||||  |||||||||||| |||||||||||  |    
T  44363129 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgtttttta 44363228  T
Q  207 cacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt 272  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  44363229 cacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 162 - 265
Target Start/End: Complemental strand, 54175149 - 54175043
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttt-caggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  54175149 gggtcccaccattttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgaca 54175050  T
Q  259 acaactt 265  Q
    |||||||    
T  54175049 acaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 35567255 - 35567146
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||| |||||| |||||||||||||||||  ||||||| |||||||| || ||||||||||| |||||||| ||| |||||||||    
T  35567255 gggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaa 35567156  T
Q  260 caactttacc 269  Q
    ||||||||||    
T  35567155 caactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 47444042 - 47443957
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttt 245  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||    
T  47444042 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgaccttt 47443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 164 - 281
Target Start/End: Original strand, 30496374 - 30496491
Alignment:
Q  164 gtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    ||||| ||||||||||||||||| ||||||||||||   ||||||||||||||||||| || ||||||||| |||||||||| |||||| ||||||||||    
T  30496374 gtccccccatttggtgtattgtatgcagccttacccgtgtttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaac 30496473  T
Q  264 tttaccagtggcgccaag 281  Q
    |||  |||| ||||||||    
T  30496474 ttttacagttgcgccaag 30496491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 162 - 262
Target Start/End: Original strand, 41018844 - 41018945
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||| ||||||||||||||||| |||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||    
T  41018844 gggtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaac 41018943  T
Q  261 aa 262  Q
    ||    
T  41018944 aa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 10660477 - 10660358
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    ||||||||||||| |||||| |||||| ||||  ||| |||||| ||||| ||||||||||||  || |||||| |||||||||||||||||||||||||    
T  10660477 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccag 10660378  T
Q  272 tggcgccaaggttacccctc 291  Q
    | ||||||||||||||||||    
T  10660377 ttgcgccaaggttacccctc 10660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 10874622 - 10874503
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    ||||||||||||| |||||| |||||| ||||  ||| |||||| ||||| ||||||||||||  || |||||| |||||||||||||||||||||||||    
T  10874622 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccag 10874523  T
Q  272 tggcgccaaggttacccctc 291  Q
    | ||||||||||||||||||    
T  10874522 ttgcgccaaggttacccctc 10874503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 13256463 - 13256578
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||     |||||||||||||  |||||||  |||||||||||||||||||||||||    
T  13256463 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctc----caggacttgaacctatgaccttccagtcacatgacaacaactttaccag 13256558  T
Q  272 tggcgccaaggttacccctc 291  Q
    | || |||||||||||||||    
T  13256559 ttgcaccaaggttacccctc 13256578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 174 - 288
Target Start/End: Complemental strand, 54730323 - 54730206
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    |||||||||| |||||||||||| ||| ||||   ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||     
T  54730323 ttggtgtattatacgcagccttatcctatttttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccg 54730224  T
Q  271 gtggcgccaaggttaccc 288  Q
     | ||||||| |||||||    
T  54730223 attgcgccaaagttaccc 54730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 288
Target Start/End: Original strand, 17315375 - 17315476
Alignment:
Q  188 gcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttac 286  Q
    ||||||||||| |||||| |||||||||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  17315375 gcagccttaccttgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttac 17315474  T
Q  287 cc 288  Q
    ||    
T  17315475 cc 17315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 487187 - 487294
Alignment:
Q  165 tcccaccatttg-gtgtattgtacgcagccttaccctgtttta--cacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||||||  |||||||||||||||| ||||| |||||||  ||||||||| ||||| || |||||||||||||||||||| |||||||||||||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaaca 487286  T
Q  262 actttacc 269  Q
    ||||||||    
T  487287 actttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 7385525 - 7385628
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||||||||||||| || || ||||||||| ||||  ||||| |||||||||| |||| |||||||||||||||||| ||||||||||||    
T  7385525 agggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacatgaca 7385624  T
Q  259 acaa 262  Q
    ||||    
T  7385625 acaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 25463207 - 25463108
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||| ||||||||| |||| ||| |||||  |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  25463207 gggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 54967105 - 54966977
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||  |||||||||| | ||| ||| ||||||||  ||||||||| |||||||||||||    
T  54967105 gggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaa 54967007  T
Q  260 caactttaccagtggcgccaaggttacccct 290  Q
    |||||||||| || ||||||||||| |||||    
T  54967006 caactttacc-gttgcgccaaggttccccct 54966977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 55766516 - 55766647
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaaccc-gtgaccttttagtcacatgacaa 259  Q
    |||| ||||||||  ||||||||||||||||||||||||||||  ||||||||  |||||| ||  |||||||||| ||||||||   ||||||||||||    
T  55766516 gggttccaccattcagtgtattgtacgcagccttaccctgtttacacacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaa 55766615  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| ||| ||||||||||||||    
T  55766616 caactttaccagttgcgtcaaggttacccctc 55766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 39029111 - 39029220
Alignment:
Q  163 ggtcccaccatttg-gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||  ||||||||||| |||||||||||||||||  |||||||||||||||| || | ||||||||  |||||||||||||||| |||||    
T  39029111 ggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaa 39029210  T
Q  260 caactttacc 269  Q
    ||||||||||    
T  39029211 caactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 47441580 - 47441689
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||| ||||||||||||||||||| |||||||||||||  ||||||| ||||| ||||||   ||||||||||| ||||||||| |||||| ||||||    
T  47441580 gggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcacgtgacaa 47441679  T
Q  260 caactttacc 269  Q
    ||||||||||    
T  47441680 caactttacc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 14983919 - 14983791
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||| |||||||||| ||| ||||||||| ||||  ||||||||||||||||  | |||||||| ||||||||||  | ||| |||||||    
T  14983919 gggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaa 14983820  T
Q  260 caactttaccagtggcgccaaggttaccc 288  Q
    |||||||||||||   |||||||||||||    
T  14983819 caactttaccagttctgccaaggttaccc 14983791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 25343261 - 25343162
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    |||||||||||||||||||||||||||||||||  ||||||||| || ||| ||| ||||||||| ||||||| | |||||| |||||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 30352683 - 30352767
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttac 286  Q
    |||||||||||||||||||| |||||||  ||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||    
T  30352683 ttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggttac 30352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 42164224 - 42164307
Alignment:
Q  187 cgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    ||||||||||||||||||| |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||| ||||||    
T  42164224 cgcagccttaccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 55830771 - 55830902
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaac-ccgtgaccttttagtcacatgacaa 259  Q
    |||| ||||||||  |||||||||||||||| |||||||||||  ||||||||| |||||| ||  |||||||| ||||||||||    |||||||||||    
T  55830771 gggttccaccattcagtgtattgtacgcagcattaccctgtttacacacaagagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaa 55830870  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| ||| ||||||||||||||    
T  55830871 caactttaccagttgcgtcaaggttacccctc 55830902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 30690226 - 30690340
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---------acacaagaggctgttttcaggacttgaacccgtgaccttttagtcac 252  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||         |||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  30690226 gggtcccaccaattggtgtattgtatgcagccttaccctgttttttattttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcac 30690325  T
Q  253 atgacaacaacttta 267  Q
     ||||||| ||||||    
T  30690326 ttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 5313099 - 5313172
Alignment:
Q  215 gctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttaccc 288  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||||    
T  5313099 gctgttttcaggaattgaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttaccc 5313172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 266
Target Start/End: Original strand, 49938643 - 49938746
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||| |||||||||||| |   ||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||    
T  49938643 gggtcccaccattttggtgtattgtacac---cttaccccgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaa 49938739  T
Q  260 caacttt 266  Q
    |||||||    
T  49938740 caacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 30581515 - 30581624
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||| |||||||||||| || ||||||||||||||   |||||||||| ||||| || ||||||||||| |||||||||||| |  ||||    
T  30581515 gggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaacccttgaccttttagtgatgtgac 30581614  T
Q  258 aacaacttta 267  Q
    ||||||||||    
T  30581615 aacaacttta 30581624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 32478841 - 32478942
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||||||||||||||||     ||||||||||||||||| |||| ||||| ||||| ||||||||||||| ||||||| |  |||||||||||||    
T  32478841 gggtcccaccatttggtgtatt-----cagccttaccctgtttttacactagaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaac 32478935  T
Q  261 aacttta 267  Q
    |||||||    
T  32478936 aacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 10277813 - 10277886
Alignment:
Q  168 caccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgac 241  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||  |||| |||||||||||||    
T  10277813 caccatttggtgtattgtacgcagccttatcctattttatacaagaggctgtttcaaggatttgaacccgtgac 10277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 43035307 - 43035224
Alignment:
Q  188 gcagccttaccctgttt--tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    ||||||||||| |||||  ||||||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||||||||||    
T  43035307 gcagccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 49796882 - 49796822
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttt 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  49796882 gggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgttt 49796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 20405174 - 20405047
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    |||||||||||||  | ||||||||||||||  |||||||||||||   ||||||||||||||||  |||       |||||||||||  ||||||||||    
T  20405174 gggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttacacaagaggctgtttctagg-------cccgtgaccttccagtcacatga 20405082  T
Q  257 caacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||||| ||| ||||||||||||||    
T  20405081 caacaactttaccagttgcgtcaaggttacccctc 20405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 20639658 - 20639777
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccattt-ggtgtattgtacgcagccttaccctg--ttttaca 208  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            |||||||| ||||||||||||||||||||||||||  |||||||    
T  20639658 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttaca 20639757  T
Q  209 caagaggctgttttcaggac 228  Q
    ||||||||||||| ||||||    
T  20639758 caagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 7909331 - 7909397
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcagga 227  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||| |||||    
T  7909331 gggtcccaccatttggtgtattgtacgcaaccttaccctgtttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 9987884 - 9987957
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaa 233  Q
    ||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||| ||||| |||||||||||    
T  9987884 gggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 23580269 - 23580365
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttta 267  Q
    ||||||||||  ||||||| ||| |||||||||  |||||||||||| |||  || ||||||||||||||||||| |||||| ||||||||||||||    
T  23580269 tttggtgtatcctacgcagtcttcccctgttttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 54640431 - 54640510
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaagg 282  Q
    |||||||||||||||||||| || |||||||||||||||||||| || ||| ||||||||| |||||| || |||||||||    
T  54640431 ttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc-gttgcgccaagg 54640510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 7038126 - 7038041
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||||| || |||||||| ||||  |||||||| ||||||| ||||||||||||| ||||||||| |||||||||||    
T  7038126 tttggtgtattgtacgaagtcttaccctattttttacacaagaagctgttt-caggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 38786744 - 38786701
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38786744 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 38786701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 51865092 - 51865149
Alignment:
Q  166 cccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttt 221  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  51865092 cccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 32629330 - 32629418
Alignment:
Q  172 atttggtgtattgtacgcagccttaccctgttttac-acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||||| ||| || |||||||||||||||   ||||||||||||||  |||| ||||||||||||||||| ||||||||||||||    
T  32629330 atttggtgtat-gtaggcggccttaccctgtttttttacaagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 3580890 - 3580994
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||| | |||||||||||||| || |||||||||| ||  ||||||||||||||    ||||  ||||||||| |||||| ||| |||||||||||||    
T  3580890 gggtcctagcatttggtgtattgcacacagccttaccatggtttttacacaagagg----tttccagacttgaactcgtgacttttcagtcacatgacaa 3580985  T
Q  260 caactttac 268  Q
    |||||||||    
T  3580986 caactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 20908686 - 20908797
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttacc--ctgttttacacaagaggctgttttcaggacttgaacccgtgacctttt-agtcacatgac 257  Q
    |||||||||||||| |||||||||||||||||||||||  || ||||| | |||| | ||||| || |||||||||  || || |||| |||||||||||    
T  20908686 gggtcccaccattttggtgtattgtacgcagccttaccttcttttttagaaaagacgatgtttccatgacttgaacatgtaacattttcagtcacatgac 20908785  T
Q  258 aacaactttacc 269  Q
    ||||||||||||    
T  20908786 aacaactttacc 20908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 49938490 - 49938594
Alignment:
Q  164 gtcccaccatttgg-tgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||||||| | || |||| |||||||||||||||||||| |||||| | |||| || || |||||||| | ||||||||| |||||| ||||||||    
T  49938490 gtcccaccattttgatgaattggacgcagccttaccctgtttttacacaatacgctgcttccaagacttgaatctgtgacctttcagtcacgtgacaaca 49938589  T
Q  262 acttt 266  Q
    |||||    
T  49938590 acttt 49938594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 25629184 - 25629073
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccc--tgttttacac 209  Q
    ||||||||||||||||||||| |||||||||||||| |||||||            |||||||||||||||||||| |||||||||||  | ||||||||    
T  25629184 aaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacac 25629085  T
Q  210 aagaggctgttt 221  Q
    ||||| ||||||    
T  25629084 aagagactgttt 25629073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 32484368 - 32484325
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  32484368 aaagggcaacccggtgcactaaagctcccgcatatgcagggtcc 32484325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 51420646 - 51420537
Alignment:
Q  175 tggtgtattgtacgcagccttaccctgttt--tacacaagaggctgttttcaggacttgaa-cccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    ||||||||||||| ||||||||||||||||  ||||||||||| ||||| || |||||||| |   |||||||| |||||| |||||||||||| ||| |    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaatcaactgacctttcagtcacgtgacaacaacttcacc-g 51420548  T
Q  272 tggcgccaagg 282  Q
    | |||||||||    
T  51420547 ttgcgccaagg 51420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 40553934 - 40553980
Alignment:
Q  121 attaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||    
T  40553934 attaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 40553980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 11394989 - 11394944
Alignment:
Q  122 ttaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  11394989 ttaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 11394944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 11404716 - 11404671
Alignment:
Q  122 ttaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  11404716 ttaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 11404671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 38755906 - 38755951
Alignment:
Q  122 ttaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  38755906 ttaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 38755951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 12257688 - 12257752
Alignment:
Q  205 tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    ||||||||| |||||||  |||| ||||||||||||||||| | |||| ||||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 18969738 - 18969698
Alignment:
Q  248 gtcacatgacaacaactttaccagtggcgccaaggttaccc 288  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggttaccc 18969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 20225212 - 20225168
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  20225212 taaagggcaacccggtgcactaaagctcccgcatatgcggggtcc 20225168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 8473621 - 8473660
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcaggg 164  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggg 8473660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 21489173 - 21489099
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaa 233  Q
    |||||||||||||| |||| ||||||||||| ||||| |||||||  || ||||||||||||| |||||||||||    
T  21489173 gggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgtttccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 29879624 - 29879679
Alignment:
Q  237 gtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||| |||||||||||||||||||||| |||| || |||| |||||||||||    
T  29879624 gtgaccttctagtcacatgacaacaactttatcagttgcaccaatgttacccctca 29879679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 35532127 - 35532084
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  35532127 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 35532084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 54175200 - 54175157
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  54175200 aaagggcagcccggtgcactaaagctcccgcatatgcagggtcc 54175157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 17079700 - 17079777
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgttt--tacacaagaggctgttttcaggacttgaaccc 236  Q
    ||||||||||||||| | |||||||| |||||||||||||||||  |||||||||   ||||| || |||||||||||    
T  17079700 agggtcccaccatttagcgtattgtatgcagccttaccctgttttatacacaagatattgtttccaagacttgaaccc 17079777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 41549428 - 41549358
Alignment:
Q  199 ctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||| ||| | |||  || |||||||||||||    
T  41549428 ctgttttacacaagaggttgtttccagaacttgaacccgtgacatttcaatcatgtgtcaacaactttacc 41549358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 10379997 - 10380086
Alignment:
Q  166 cccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    ||||| |||||||||||||||||||   ||| |||  |||||||||||||| |||||  |||||||||||  ||||||||| ||||||||    
T  10379997 cccactatttggtgtattgtacgcaattttatcctatttttacacaagaggttgtttgtaggacttgaacaagtgacctttcagtcacat 10380086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 36589786 - 36589708
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaagg 282  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||| |||||  ||||| |||||||||| || |||||||||    
T  36589786 ttttacacaagaggctgtttccaggacttgaacctg-gacgtttcagtcatgtgacatcaactttacc-gttgcgccaagg 36589708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 12711499 - 12711542
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt 205  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||    
T  12711499 gggtcccgccatttggtgtattgtacgcagtcttaccctatttt 12711542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 28494282 - 28494247
Alignment:
Q  128 ggcaacccggtgcactagagctcccgcatatgcagg 163  Q
    |||| |||||||||||||||||||||||||||||||    
T  28494282 ggcagcccggtgcactagagctcccgcatatgcagg 28494247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 33836487 - 33836530
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||    
T  33836487 aaagggcaacccgttgcactaaagctcccgcatacgcagggtcc 33836530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 56323035 - 56322992
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||    
T  56323035 aaagggcaacccggtgcactaaagctcccgcatatccggggtcc 56322992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 10277757 - 10277799
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||    
T  10277757 aaagggcaatccggttcactagaactcccgcatatgcagggtc 10277799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 50856350 - 50856407
Alignment:
Q  224 aggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaagg 282  Q
    |||||||||||||||||||||| | |||  |||||||||||||||| || |||||||||    
T  50856350 aggacttgaacccgtgacctttcaatcatgtgacaacaactttacc-gttgcgccaagg 50856407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 21647098 - 21647065
Alignment:
Q  127 gggcaacccggtgcactagagctcccgcatatgc 160  Q
    |||||||||||||||||| |||||||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgc 21647065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 13256399 - 13256435
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  13256399 aaagggcaacccggtgcactaaagctcccgcagatgc 13256435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 16494305 - 16494258
Alignment:
Q  161 agggtcccaccattt--ggtgtattgtacgcagccttaccctgtttta 206  Q
    |||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  16494305 agggtcccaccatttttggtgtattgtatgcagctttaccctgtttta 16494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 25388312 - 25388268
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||    
T  25388312 taaagggcaacccggtgcactaaagctcatgcatacgcagggtcc 25388268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 44357294 - 44357195
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgttt--tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    ||||||||||||||||  | ||||| || |||  ||||||| ||| |||||  ||||||||||| | |||||||| ||| |||| |||| ||||||||||    
T  44357294 tttggtgtattgtacgtcgtcttactctatttattacacaaaaggttgtttctaggacttgaactcatgacctttcagttacataacaataactttacca 44357195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 5e-63; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 12670250 - 12670429
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    |||||| |||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  12670250 aaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 12670349  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  12670350 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 30454097 - 30454277
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  30454097 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgttttacacaa 30454196  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  30454197 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 30454277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 36720881 - 36720749
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  36720881 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaa 36720782  T
Q  260 caactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||  ||||||||||||||||||    
T  36720781 caactttaccagttacgccaaggttacccctca 36720749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 13160786 - 13160655
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||  ||||||||||||||    
T  13160786 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaac 13160687  T
Q  261 aactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||| ||||| |||||||||||||    
T  13160686 aactttaccagttgcgccgaggttacccctca 13160655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 20869560 - 20869677
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtg 273  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  20869560 ttggtgtattgtacacagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagtt 20869659  T
Q  274 gcgccaaggttacccctc 291  Q
    |||||||||||| |||||    
T  20869660 gcgccaaggttatccctc 20869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 28817676 - 28817808
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  28817676 gggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaa 28817775  T
Q  260 caactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||| || ||||||||||||||||    
T  28817776 caactttaccagttgcaccaaggttacccctca 28817808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 44530234 - 44530103
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| || ||||||||||||||||||| |||||||||||||     
T  44530234 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacag 44530135  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| ||||||||||||||||||    
T  44530134 caactttaccagttgcgccaaggttacccctc 44530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 45071349 - 45071219
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||  | ||||||||||||    
T  45071349 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaac 45071250  T
Q  261 aactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||  |||||||||||||||||    
T  45071249 aactttaccagtatcgccaaggttacccctc 45071219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 35261814 - 35261633
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtttt--acac 209  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            ||||||||||||||||||||||| ||||||||||||||  ||||    
T  35261814 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacac 35261715  T
Q  210 aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||| |||||| |||| |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  35261714 aagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 35261633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 39460994 - 39461178
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            |||||||  ||||||||||||||||||||||| |||||||  ||    
T  39460994 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttac 39461093  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  39461094 acaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttacccctca 39461178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 165 - 291
Target Start/End: Original strand, 29521738 - 29521866
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||    
T  29521738 tcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaa 29521837  T
Q  263 ctttaccagtggcgccaaggttacccctc 291  Q
    ||||| |||| ||||||||||||||||||    
T  29521838 ctttatcagttgcgccaaggttacccctc 29521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 23286336 - 23286432
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgt 219  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23286336 taaagggcagcccggtgcactagagctcccgcatatgcagggtcccaccatttggtgtattgtacgcagctttaccctgttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 2626607 - 2626472
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-----acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    |||||||| ||||||||||||||||||||| |||||||||||||     |||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  2626607 gggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatga 2626508  T
Q  257 caacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||| | |||||||||||||||||||    
T  2626507 caacaactttaccaattgcgccaaggttacccctca 2626472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 7136577 - 7136710
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||  |||||||||||||| ||||| |||||||||||||| |||||||  |||||||||||    
T  7136577 gggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgac 7136676  T
Q  258 aacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||||| ||||||||||||||||||    
T  7136677 aacaactttaccagttgcgccaaggttacccctc 7136710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 17823712 - 17823529
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctg--ttttaca 208  Q
    |||||||||||||||||||||| |||||| ||||||||||||| |            |||||||||||||||| ||||||| |||| ||||  |||||||    
T  17823712 taaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttaca 17823613  T
Q  209 caagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||||||    
T  17823612 caagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaagattacccctca 17823529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 6760959 - 6760776
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||            |||||||  |||||||||||||| ||||||||||||||||  ||    
T  6760959 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttac 6760860  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||    
T  6760859 acaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaa-gttacccctca 6760776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 173 - 292
Target Start/End: Original strand, 18164821 - 18164941
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| |    
T  18164821 tttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccgg 18164920  T
Q  272 tggcgccaaggttacccctca 292  Q
    | |||||||| ||||||||||    
T  18164921 ttgcgccaagattacccctca 18164941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 26954220 - 26954086
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    |||||||||||||  |||||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  26954220 gggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatga 26954121  T
Q  257 caacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||| |  |||||| ||||||||||    
T  26954120 caacaactttaccaattacgccaaagttacccctc 26954086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 20284119 - 20284250
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt----acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatg 255  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||    | |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  20284119 gggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatg 20284218  T
Q  256 acaacaactttaccagtggcgccaaggttacc 287  Q
    |||||||||||||| || ||| ||||||||||    
T  20284219 acaacaactttacccgttgcgtcaaggttacc 20284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 24365109 - 24365218
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg---ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||  ||| |||||||||||||| ||||||||||||||||    
T  24365109 gggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccgtgacattttagtcacatgaca 24365208  T
Q  259 acaactttac 268  Q
    ||||||||||    
T  24365209 acaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 21070747 - 21070879
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-----acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||     | |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  21070747 gggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 21070846  T
Q  255 gacaacaactttaccagtggcgccaaggttacc 287  Q
    ||||||||||||||| || ||| ||||||||||    
T  21070847 gacaacaactttacccgttgcgtcaaggttacc 21070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 37319582 - 37319461
Alignment:
Q  311 ttgtcaaataatgaagtgaattaaacacaggttactgctgctcttgcaaatgctgggctggaatcttctaatctcattgttggaattgatttcacaaaga 410  Q
    ||||||||||||||| | ||||  ||||||||||||||||||||| || |||||||  ||||||| ||||||||||||||||| ||||||||||||||||    
T  37319582 ttgtcaaataatgaaat-aattgcacacaggttactgctgctctttcacatgctggcttggaatcatctaatctcattgttggcattgatttcacaaaga 37319484  T
Q  411 gcaatgagtggacaggtgttatc 433  Q
    ||||||| ||||||||| |||||    
T  37319483 gcaatgaatggacaggttttatc 37319461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 25250609 - 25250475
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  ||||||||||||||||||| |||||| ||||  |||||| ||||||||| ||||||||||||  ||||||||  |||||||||||    
T  25250609 gggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgac 25250510  T
Q  258 aacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||||| | |||||||||||| ||||    
T  25250509 aacaactttaccagttgtgccaaggttacctctca 25250475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 28407471 - 28407379
Alignment:
Q  191 gccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaagg 282  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  28407471 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 8897814 - 8897940
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||  ||||||| || ||||| |||||||| |||||||||||||   ||||||||||||    
T  8897814 gggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaa 8897913  T
Q  260 caactttaccagtggcgccaaggttac 286  Q
    ||||||||||||| | |||| ||||||    
T  8897914 caactttaccagttgtgccagggttac 8897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 272
Target Start/End: Complemental strand, 12626025 - 12625862
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtttt---aca 208  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            ||||||||||||||||||| |||| |||||||||||||   |||    
T  12626025 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttaca 12625926  T
Q  209 caagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt 272  Q
    ||||||| ||||| |||||||||| ||||||||||   ||||||| ||||||||||||||||||    
T  12625925 caagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagt 12625862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 44781567 - 44781677
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| ||||| |||||||||||||||||| |||| |||||| ||||||||||||||||     
T  44781567 tttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc- 44781665  T
Q  271 gtggcgccaagg 282  Q
    || |||||||||    
T  44781666 gttgcgccaagg 44781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 123 - 259
Target Start/End: Original strand, 23000227 - 23000365
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgca---gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctg 218  Q
    |||||||||||||||||||||| |||||||||||  |     ||||||||||||||||||||||||| | | ||||||| || |||||||||||||||||    
T  23000227 taaagggcaacccggtgcactaaagctcccgcatccgggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctg 23000326  T
Q  219 ttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||| ||||||||  ||||||||||||| |||||||||||||    
T  23000327 tttccaggactt--acccgtgacctttcagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 24245520 - 24245405
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt 272  Q
    ||||||| |||||||| || |||||||||||  ||| ||||| | |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24245520 tttggtgcattgtacgtagtcttaccctgtt--acataagagac-gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagt 24245424  T
Q  273 ggcgccaaggttacccctc 291  Q
     || |||||||||||||||    
T  24245423 tgccccaaggttacccctc 24245405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 22598243 - 22598133
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||| ||||| ||||||||||||||  ||||||||||||||||  |||||||||| ||||| ||||| ||||||||||||||||| |||||  |||||    
T  22598243 agggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtcatgtgaca 22598144  T
Q  259 acaactttacc 269  Q
    |||||||||||    
T  22598143 acaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 263
Target Start/End: Complemental strand, 31457307 - 31457155
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgtttt-acaca 210  Q
    ||||||||| |||||||||||||||||||||||| |||||||            || |||||||| ||||||||||||||||||  ||| |||| |||||    
T  31457307 aaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctatttttacaca 31457208  T
Q  211 agaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    ||||| ||||| ||||||||||||||||||||||| || ||||||||||||||    
T  31457207 agaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 35106008 - 35105902
Alignment:
Q  163 ggtcccaccatt-tggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||| ||||||||||||||||||||||| || |  ||||||||||||| ||||| ||||||||||||||||||||||| || ||| ||||||    
T  35106008 ggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaa 35105909  T
Q  260 caacttt 266  Q
    |||||||    
T  35105908 caacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 5135339 - 5135418
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttacc--ctgttttacacaagaggctgttttcaggacttgaacccgtg 239  Q
    |||||||||||||||||||||||||| ||||||||||  || |||||||||||||||||||| |||||||||||||||||    
T  5135339 gggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 42083748 - 42083870
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccc--tgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| ||| || ||||||||||||| |||  | |||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||    
T  42083748 gggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgaca 42083847  T
Q  259 acaactttaccagtggcgccaagg 282  Q
    |||| |||||| || |||||||||    
T  42083848 acaattttacc-gttgcgccaagg 42083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 8483988 - 8484109
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||| |||||||||||||||||||||| |||||  |||||||||||||| ||||| |||||||||||||| |||| ||| |||||| || |||    
T  8483988 gggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaacccatgacatttaagtcacgtggcaa 8484087  T
Q  260 caactttaccagtggcgccaagg 282  Q
    |  ||||||| || |||||||||    
T  8484088 ccgctttacc-gttgcgccaagg 8484109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 180 - 290
Target Start/End: Complemental strand, 11748366 - 11748254
Alignment:
Q  180 tattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgc 277  Q
    |||||||||| | |||||||||  ||||||| |||||||||||| || |||||||||||||||| ||| |||||||||||||||| || |||||| || |    
T  11748366 tattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgcac 11748267  T
Q  278 caaggttacccct 290  Q
    ||| |||||||||    
T  11748266 caaagttacccct 11748254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 11000999 - 11001109
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||||||||||||||| |||||||| | ||||||   |||||  ||| ||||||||| | ||||||||| ||||||| | ||||||||||    
T  11000999 gggtcccaccatttggtgtattgtacacagccttatcttgtttttttacacagtaggttgttttcagaatttgaacccgcgacctttcaatcacatgaca 11001098  T
Q  259 acaactttacc 269  Q
    |||||||||||    
T  11001099 acaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 389727 - 389643
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt----acacaagaggctgttttcaggacttgaacccgtgaccttt 245  Q
    ||||| |||||||||||||||||||| ||||||||||||||    |||||||||| ||||| |||||||||||||||||||||||    
T  389727 tcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgaccttt 389643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 5689716 - 5689640
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaaccc 236  Q
    |||| |||||||||||||||||||||||||||||||||||  |||||||||||||||| ||| || |||||||||||    
T  5689716 gggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctatttacaagacttgaaccc 5689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 29877179 - 29877111
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggac 228  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| ||||||    
T  29877179 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 14018019 - 14018140
Alignment:
Q  163 ggtcccacca-tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||| ||| ||||||||||||||| || ||||||||||  ||||||||| |||||| || ||||||||||| |||||||| | |||| ||||||    
T  14018019 ggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaa 14018118  T
Q  260 caactttaccagtggcgccaagg 282  Q
    |||| ||||| || |||||||||    
T  14018119 caacattacc-gttgcgccaagg 14018140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 19729425 - 19729366
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttt 221  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  19729425 gggtcccaccatttggtgtattgtacacagccttaccctgttttacataagagactgttt 19729366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 30962865 - 30962929
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttt 266  Q
    |||||||||||||||||||| |||||||||||  |||||||||| | ||||||||||||||||||    
T  30962865 ttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 44742568 - 44742698
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||  ||||| ||| |||||||| | |||||||  | ||||  ||||    
T  44742568 gggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgaca 44742667  T
Q  259 acaactttaccagtggcgccaaggttacccct 290  Q
    ||||||||||| || || |||||||| |||||    
T  44742668 acaactttacc-gttgcaccaaggttccccct 44742698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 20870060 - 20869941
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctg--ttttac 207  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||            |||||||  |||||||||||||||||||||||||||  ||||||    
T  20870060 aaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 20869961  T
Q  208 acaagaggctgttttcagga 227  Q
    ||||||| |||||| |||||    
T  20869960 acaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 292
Target Start/End: Original strand, 40604964 - 40605087
Alignment:
Q  171 catttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    ||||| |||||||||||||| ||||| ||  | |||||||||| ||  ||||| || ||||||||||| | | | |  | ||||||||||||||||||||    
T  40604964 catttagtgtattgtacgcaaccttatccaattttttacacaaaagattgtttccatgacttgaacccataatcatccaatcacatgacaacaactttac 40605063  T
Q  269 cagtggcgccaaggttacccctca 292  Q
    |||| ||||||| |||||||||||    
T  40605064 cagttgcgccaaagttacccctca 40605087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 17250924 - 17251001
Alignment:
Q  161 agggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaac 234  Q
    ||||||||||||||  ||||||||||||||| |||||| ||||||||  ||||||||||||| || ||||||||||||    
T  17250924 agggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgcttccaggacttgaac 17251001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 26102652 - 26102609
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  26102652 aaagggcaacccggtgcactagagctcccgcataagcagggtcc 26102609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 43942411 - 43942347
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttt 222  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  43942411 gggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagaggctgtttt 43942347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 23286431 - 23286475
Alignment:
Q  248 gtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcgacaaggttacccctca 23286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 10857913 - 10857852
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccctg---ttttacacaagaggctgttt 221  Q
    |||||||||| |||||||||||| |||||||||||||||   ||||||||||||||| ||||    
T  10857913 ggtcccaccaattggtgtattgtgcgcagccttaccctgtttttttacacaagaggcggttt 10857852  T

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Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 27468092 - 27468135
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  27468092 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 27468135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 26457814 - 26457776
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccct 200  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  26457814 gggtcccaccaattggtgtattgtacgcagccttaccct 26457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 13160841 - 13160793
Alignment:
Q  119 acattaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||| |||||  |||||||||||| |||||||||    
T  13160841 acattaaagggcaacccggcgcactgaagctcccgcatacgcagggtcc 13160793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 16225157 - 16225113
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||    
T  16225157 taaaggacaacccggtgcactaaagctcccgcatatgcggggtcc 16225113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 31454216 - 31454144
Alignment:
Q  217 tgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccc 289  Q
    |||||||||||| |||||  ||||||||| |  ||||||||||||||| |||| || |||||||| |||||||    
T  31454216 tgttttcaggacatgaacatgtgacctttcaaccacatgacaacaactataccggttgcgccaagattacccc 31454144  T

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Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 44530289 - 44530241
Alignment:
Q  119 acattaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||| ||||| ||||||||||||||| |||||||||||| |||||||||    
T  44530289 acataaaaggtcaacccggtgcactaaagctcccgcatacgcagggtcc 44530241  T

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Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 18164764 - 18164803
Alignment:
Q  128 ggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtcc 18164803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 19729475 - 19729432
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||| || ||||||||||||||||| |||||||||||||    
T  19729475 aaagggcaatccagtgcactagagctcccgtatatgcagggtcc 19729432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 16013591 - 16013549
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||    
T  16013591 aaaggacaacccggtgcactaaagctcccgcataggcagggtc 16013549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 29521685 - 29521727
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    |||| |||||||||||||||| |||||||||||| ||||||||    
T  29521685 aaagagcaacccggtgcactaaagctcccgcatacgcagggtc 29521727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 36918199 - 36918102
Alignment:
Q  172 atttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttta 267  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||   ||||| ||| ||||||||  ||||||||| |||  ||| ||||||| ||||    
T  36918199 atttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttcagttccataacaacaatttta 36918102  T

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Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 10857964 - 10857927
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgca 161  Q
    ||||||||||||||||||||| |||||||||||| |||    
T  10857964 aaagggcaacccggtgcactaaagctcccgcatacgca 10857927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 42840900 - 42840863
Alignment:
Q  254 tgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  42840900 tgacaacaactttactagttgcgccaaggttacccctc 42840863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 7136527 - 7136563
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    |||||| |||||||||||||| |||||||||||||||    
T  7136527 aaagggtaacccggtgcactaaagctcccgcatatgc 7136563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 25250659 - 25250623
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    ||||||||||||||||||||| | |||||||||||||    
T  25250659 aaagggcaacccggtgcactaaatctcccgcatatgc 25250623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 26954270 - 26954234
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    |||||||||||| |||||||| |||||||||||||||    
T  26954270 aaagggcaacccagtgcactaaagctcccgcatatgc 26954234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 27508044 - 27508004
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcagggt 165  Q
    |||| ||||||||||||||| |||||||||||| |||||||    
T  27508044 aaggacaacccggtgcactaaagctcccgcatacgcagggt 27508004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 30962770 - 30962814
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||| ||||| | |||||||||| |||||||||    
T  30962770 taaagggcaacccggttcactaaatctcccgcatacgcagggtcc 30962814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 5e-63; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 21172009 - 21172188
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  21172009 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 21172108  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  21172109 gaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 21172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 32758394 - 32758214
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||| |||||||||||||||||||||||    
T  32758394 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacacaa 32758295  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  32758294 gaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 32758214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 123 - 292
Target Start/End: Original strand, 48735121 - 48735303
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacaca 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||| |||||||||||    
T  48735121 taaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgttttacaca 48735220  T
Q  211 agaggctgttttca-ggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  48735221 agaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 48735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 122 - 284
Target Start/End: Original strand, 10693071 - 10693245
Alignment:
Q  122 ttaaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacac 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||| ||||||||    
T  10693071 ttaaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttacac 10693170  T
Q  210 aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggtt 284  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  10693171 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 125 - 294
Target Start/End: Complemental strand, 42477005 - 42476824
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcag------------ggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaag 212  Q
    |||||||||| |||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaag 42476906  T
Q  213 aggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctcaga 294  Q
    || |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  42476905 agactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgccaatgttacccctcaga 42476824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 2541069 - 2541202
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgacctttt-agtcacatgaca 258  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  2541069 gggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttccagtcacatgaca 2541168  T
Q  259 acaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||| |||||||||||||||||||    
T  2541169 acaactttaccagttgcgccaaggttacccctca 2541202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 124 - 263
Target Start/End: Original strand, 42391100 - 42391251
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  42391100 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 42391199  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    || ||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  42391200 gaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 42798804 - 42798623
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagg------------gtcccaccatttggtgtattgtacgcagccttaccctg--ttttacac 209  Q
    ||||||||||||| ||||||| ||||||||||||||||||            ||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  42798804 aaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacac 42798705  T
Q  210 aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||| |||||| || |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  42798704 aagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 42798623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 47077905 - 47078034
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||||||||| |||||||||||||| | |||| || ||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||    
T  47077905 gggtcccaccattttgtgtattgtacgcaactttactctattttacacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 47078004  T
Q  262 actttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||| ||||||||||||||||||    
T  47078005 actttaccagttgcgccaaggttacccctc 47078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 42805661 - 42805477
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||            |||||||  ||||||||||||| |||||||||||||||||  ||    
T  42805661 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttac 42805562  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||    
T  42805561 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctca 42805477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 43557559 - 43557426
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  43557559 gggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgac 43557460  T
Q  258 aacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||||| ||| ||||||||||||||    
T  43557459 aacaactttaccagttgcggcaaggttacccctc 43557426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 46354281 - 46354148
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||  | |||||||||    
T  46354281 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatcacatgac 46354182  T
Q  258 aacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||||| ||||||||||||||||||    
T  46354181 aacaactttaccagttgcgccaaggttacccctc 46354148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 19426938 - 19427059
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  19426938 agggtcccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgaca 19427037  T
Q  259 acaactttaccagtggcgccaa 280  Q
    |||||||||||||| |||||||    
T  19427038 acaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 11617638 - 11617762
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||    
T  11617638 gggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaa 11617737  T
Q  260 caactttaccagtggcgccaaggtt 284  Q
    ||||||||||||| ||||| |||||    
T  11617738 caactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 266
Target Start/End: Complemental strand, 11741927 - 11741774
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcag------------ggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaag 212  Q
    |||||||||||||||||||||||||||||||| |||||            | |||||||||||||||||||||||||||||||||||| |||||||| ||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctattttacactag 11741828  T
Q  213 aggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttt 266  Q
    | |||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  11741827 aagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 27629719 - 27629596
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||||||||  |||| |||||||    
T  27629719 gggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaa 27629620  T
Q  260 caactttaccagtggcgccaaggt 283  Q
    ||||||||||||| ||||||||||    
T  27629619 caactttaccagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 2662984 - 2663112
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||  |  |||||||| |||||    
T  2662984 agggtcccaccatttggtgtattgtacgcagccttaccctattttacacaagaggctgtttccaggacttgaacctatgac--tccagtcacataacaac 2663081  T
Q  261 aactttaccagtggcgccaaggttacccctc 291  Q
    |||||||| ||| ||||||||||||||||||    
T  2663082 aactttactagttgcgccaaggttacccctc 2663112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 47716546 - 47716413
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||  ||||||||| |    
T  47716546 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggc 47716447  T
Q  258 aacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||| ||||| | ||||||||||||||||    
T  47716446 aacaacttttccagttgtgccaaggttacccctc 47716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 33871960 - 33872070
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||    
T  33871960 gggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaac 33872059  T
Q  261 aactttaccag 271  Q
    |||||||||||    
T  33872060 aactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 165 - 292
Target Start/End: Original strand, 34626261 - 34626389
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||| | ||| ||||| | |||||||||||||||    
T  34626261 tcccaccatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaac 34626360  T
Q  264 tttaccagtggcgccaaggttacccctca 292  Q
    ||||||||| |||| ||||||||||||||    
T  34626361 tttaccagttgcgctaaggttacccctca 34626389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 23419724 - 23419845
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||     
T  23419724 gggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacag 23419823  T
Q  260 caactttaccagtggcgccaagg 282  Q
    |||||||||| || |||||||||    
T  23419824 caactttacc-gttgcgccaagg 23419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 35334866 - 35334996
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||  ||| ||| |||||| |||||||||||| |||||||||  |||||||||||||||    
T  35334866 gggtcccaccattcggtgtattgtacacagtcttaccctgttttttacacgagactgtttccaggacttgaactcgtgaccttccagtcacatgacaaca 35334965  T
Q  262 actttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||| |||||||||||| ||||||    
T  35334966 actttaccagttgcgccaaggttatccctca 35334996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 13805185 - 13805057
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccc-tgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||| |||||||||||||||| |||||| |||||||||||||||    
T  13805185 ggtcccaccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaaca 13805086  T
Q  262 actttaccagtggcgccaaggttacccctc 291  Q
    ||||||||| | ||||||||| | ||||||    
T  13805085 actttacca-ttgcgccaaggctccccctc 13805057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 22699017 - 22699151
Alignment:
Q  161 agggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||  ||||||||| || ||| |||||||||||||| | |||||| ||||||||||    
T  22699017 agggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttcagtcacatga 22699116  T
Q  257 caacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||||| ||| ||||||||||||||    
T  22699117 caacaactttaccagttgcgtcaaggttacccctc 22699151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 40463961 - 40463837
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||  | |||||||||||||||||||  ||||||||||||||    
T  40463961 gggtcccaccatttggtgtattatacgcagccttacccagtttttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaac 40463862  T
Q  261 aactttaccagtggcgccaaggtta 285  Q
    ||||||||| || ||||||||||||    
T  40463861 aactttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 290
Target Start/End: Complemental strand, 18327091 - 18326989
Alignment:
Q  189 cagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacc 287  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  18327091 cagccttaccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttacc 18326992  T
Q  288 cct 290  Q
    |||    
T  18326991 cct 18326989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 8148995 - 8149126
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||   ||||||||||  ||||||||||||||||| |||||| ||  ||||||||||||    
T  8148995 gggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgactttgcagtcacatgaca 8149094  T
Q  259 acaactttaccagtggcgccaaggttacccct 290  Q
    ||||| |||||||| | |||||||||||||||    
T  8149095 acaacattaccagttgtgccaaggttacccct 8149126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 42495916 - 42496017
Alignment:
Q  192 ccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccct 290  Q
    |||||||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  42495916 ccttaccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccct 42496015  T
Q  291 ca 292  Q
    ||    
T  42496016 ca 42496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 19265899 - 19265791
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| | || |||||||||||||||||||| |||||| |||||||    
T  19265899 gggtcccaccatttggtgtattgtacgcagccttaccctctttttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaac 19265800  T
Q  261 aactttacc 269  Q
    |||||||||    
T  19265799 aactttacc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 173 - 292
Target Start/End: Complemental strand, 12473378 - 12473257
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    |||||||||||||||||| ||||||||||||||  |||||||||| ||||| |||||||||||||| |||||||| ||  |||||||||||||||||||     
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttaccg 12473279  T
Q  271 gtggcgccaaggttacccctca 292  Q
    || ||||||||| |||||||||    
T  12473278 gttgcgccaaggctacccctca 12473257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 173 - 290
Target Start/End: Original strand, 5180218 - 5180337
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    |||||||| |||||| ||| |||||||||||||  |||||||||||||||| ||| | |||||||| |||||||| ||||||||||||||||||||||||    
T  5180218 tttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttacca 5180317  T
Q  271 gtggcgccaaggttacccct 290  Q
    || ||| |||||||||||||    
T  5180318 gttgcgtcaaggttacccct 5180337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 31591109 - 31591242
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgca------------gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||            ||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  31591109 aaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctgttttacacaa 31591208  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttt 245  Q
    |||| ||||| |||||||||||| ||||||||||    
T  31591209 gaggttgtttccaggacttgaactcgtgaccttt 31591242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 19266532 - 19266426
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    |||||| ||||||||||||||||||||||||||||||||||  || |||| |||| ||||||||||||||||||  ||||||| ||||||||||||||||    
T  19266532 tcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaacccacgacctttcagtcacatgacaacaa 19266433  T
Q  263 ctttacc 269  Q
    |||||||    
T  19266432 ctttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 28362195 - 28362316
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||||||||||  |||||  ||||||||||| ||||  |||||||||||| ||||||||| || ||||||||||    
T  28362195 gggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaa 28362294  T
Q  260 caactttaccagtggcgccaagg 282  Q
    |||||||||| || |||||||||    
T  28362295 caactttacc-gttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 48123534 - 48123655
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||||||||| ||||  ||||||||||  |||||||||||||||||| |||||||||||||| |||||||| || ||||||| ||    
T  48123534 gggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgataa 48123633  T
Q  260 caactttaccagtggcgccaagg 282  Q
    |||||||||| || |||||||||    
T  48123634 caactttacc-gttgcgccaagg 48123655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 14099056 - 14099165
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||| |||| ||||||||  |||||| ||||| ||| |||||||| ||||| |||||||| |||||||||||||    
T  14099056 gggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaa 14099155  T
Q  260 caactttacc 269  Q
    ||||||||||    
T  14099156 caactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 14409073 - 14409182
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||| |||| ||||||||  |||||| ||||| ||| |||||||| ||||| |||||||| |||||||||||||    
T  14409073 gggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaa 14409172  T
Q  260 caactttacc 269  Q
    ||||||||||    
T  14409173 caactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 173 - 287
Target Start/End: Original strand, 14732884 - 14732999
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgttttacacaag--aggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    |||||||||||| ||||||||||||||||||||  ||| |  ||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  14732884 tttggtgtattg-acgcagccttaccctgttttttacatgggaggctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttacca 14732982  T
Q  271 gtggcgccaaggttacc 287  Q
    || ||||||||||||||    
T  14732983 gttgcgccaaggttacc 14732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 293
Target Start/End: Original strand, 28078182 - 28078314
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttac-acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||   ||| ||| ||||||  |||||||||||||||||||||  ||||||||||||||    
T  28078182 gggtcccaccatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggacttgaacccgtgaccttacagtcacatgacaac 28078281  T
Q  261 aactttaccagtggcgccaaggttacccctcag 293  Q
    ||||| || ||| |||||| |||||||||||||    
T  28078282 aacttcacgagttgcgccagggttacccctcag 28078314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 6736969 - 6736867
Alignment:
Q  167 ccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactt 265  Q
    |||||||||||||||||||| |||| |||||| |||||| | |||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactt 6736870  T
Q  266 tac 268  Q
    |||    
T  6736869 tac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 7193127 - 7193039
Alignment:
Q  203 tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| |||||  |||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttacccctc 7193039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 29907505 - 29907393
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatg--a 256  Q
    |||||||||||||| ||||||||| |||||||||||| || ||||  ||||||||||||||||  |||||||||||||||||||||| |||||||||  |    
T  29907505 gggtcccaccattttggtgtattgaacgcagccttacactattttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgata 29907406  T
Q  257 caacaactttacc 269  Q
    |||||||||||||    
T  29907405 caacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 7879723 - 7879639
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgacctt 244  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||  ||||| ||||||||||||||||||||||    
T  7879723 gggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 7645030 - 7644931
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    |||||||||||||||||   |||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||| |||||||    
T  7645030 tttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 7794598 - 7794682
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttac 286  Q
    ||||||| |||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||| |||| ||||||||    
T  7794598 ttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgctaaggttac 7794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 18512503 - 18512587
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgttttcaggacttgaacccgtgaccttt 245  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||||| |||||||||||||||||||||||    
T  18512503 gggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttccaggacttgaacccgtgaccttt 18512587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 18747572 - 18747472
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg---ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||| |||||||||| |||||||||||||||||   |||||||||| ||||||||| || ||||||| |||||||||||| |||||| |||||    
T  18747572 gggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttccaagacttgatcccgtgacctttcagtcacgtgaca 18747473  T
Q  259 a 259  Q
    |    
T  18747472 a 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 32233188 - 32233286
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    ||||||||||||||||| | ||||| ||||||||||||||| |||||||||| ||||| |||||||||||||| |||||||| |||||  |||||||||    
T  32233188 tcccaccatttggtgtaatatacgctgccttaccctgtttttacacaagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 21447633 - 21447544
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||||||||||||| |||||||| ||||||||||  | | |||||||||||| |||| |||| ||||||||||||||||||    
T  21447633 ttttacacaagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgccaaggttacccctc 21447544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 16341352 - 16341254
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||  || ||||||||||||||||||| |   |||||| ||||||||||||    
T  16341352 tttggtgtattgtacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 1423972 - 1424085
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    |||||||| |||| ||||| ||||||||||||  |||||| || |||||| ||||| ||||| ||||||||||  |||||||| ||||||||||||||||    
T  1423972 ttggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccag 1424071  T
Q  272 tggcgccaaggtta 285  Q
    | ||||||| ||||    
T  1424072 ttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 38604611 - 38604546
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcagg 226  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  38604611 gggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 39123980 - 39123865
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    ||||||||||||||  |||||||| |||||||||||    |||||||||| ||||||||| | ||||  |||||||||||||||| | ||| ||||||||    
T  39123980 gggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacat 39123881  T
Q  255 gacaacaactttacca 270  Q
    ||||||||||||||||    
T  39123880 gacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 3469238 - 3469350
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt----acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    |||||||||||||||||| || |||||||||||    |||||||||  |||||  |||||||||  | ||||||||| ||||||||||||||||||||||    
T  3469238 tttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttac 3469337  T
Q  269 cagtggcgccaagg 282  Q
    | || |||||||||    
T  3469338 c-gttgcgccaagg 3469350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 44123672 - 44123780
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||  || |||||||||  | ||| ||||||| |||||| |||||||||||||||| ||| |||||||||||| | |||| |||||||||||| |    
T  44123672 gggtcccattatatggtgtatttcatgcaaccttaccttgtttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacacc 44123771  T
Q  261 aactttacc 269  Q
    |||||||||    
T  44123772 aactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 38262246 - 38262340
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    |||||||| |||||||||||||||| ||| | ||||| | ||||  ||||||||| |||||| ||||||||||||||||||||||  ||||||||    
T  38262246 gggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaagagactgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 1408542 - 1408469
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaa 233  Q
    ||||||||||||||| |||||||||| |||||||||| ||  |||||||||||||||| ||| |||||||||||    
T  1408542 gggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 11690310 - 11690254
Alignment:
Q  371 gaatcttctaatctcattgttggaattgatttcacaaagagcaatgagtggacaggt 427  Q
    |||||||| ||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  11690310 gaatcttccaatcttattgttggtgttgatttcacaaagagcaatgagtggacaggt 11690254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 35203513 - 35203439
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttt 245  Q
    |||||| |||||||||||| |||| ||||||||  |||||||||  ||||| |||||||||||||||||||||||    
T  35203513 tttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgaccttt 35203439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 35787319 - 35787378
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtt 220  Q
    ||||||| ||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  35787319 gggtcccgccatttggtgtattgtacgcaaccttaccatgtttttacacaagaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 15108450 - 15108527
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgac 241  Q
    |||||| ||||| |||||||||| |||||||||| |||||| ||||||||  |||||| |||||||||||| ||||||    
T  15108450 tcccactatttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaactcgtgac 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 42101933 - 42102044
Alignment:
Q  161 agggtcccacca-tttggtgtattgtacgcagccttaccctgttttacac--aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||| ||| | ||| |||||||||  ||||||||||||  ||  |||||||||||| ||||||||||||   |||||||  |||||| ||||    
T  42101933 agggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttccaggacttgaacttttgaccttccagtcacgtgac 42102032  T
Q  258 aacaactttacc 269  Q
    ||||||||||||    
T  42102033 aacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 29140487 - 29140538
Alignment:
Q  237 gtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttaccc 288  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||| ||||||    
T  29140487 gtgacctttcagttacatgacaacaactttaccagttgcgccaagattaccc 29140538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 36602582 - 36602540
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    ||||||||||||||||||||| |||||||||||| ||||||||    
T  36602582 aaagggcaacccggtgcactaaagctcccgcatacgcagggtc 36602540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 11458380 - 11458421
Alignment:
Q  226 gacttgaacccgtgaccttttagtcacatgacaacaacttta 267  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  11458380 gacttgaactcgtgaccttttagtcacatgacaataacttta 11458421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 22065672 - 22065563
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||| ||| ||||| | ||||||| ||||| ||||||| |||| |||||||||| ||||| ||  |||||||| | |||| ||| | |||| |||||||    
T  22065672 gggtctcactatttgctttattgtatgcagctttaccctatttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaac 22065573  T
Q  261 aactttacca 270  Q
    ||||||||||    
T  22065572 aactttacca 22065563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 27889366 - 27889399
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagcctt 195  Q
    ||||||||||||||||||||||||||||||||||    
T  27889366 gggtcccaccatttggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 294
Target Start/End: Complemental strand, 43852111 - 43852002
Alignment:
Q  178 tgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggc 275  Q
    ||||||||||  ||||||||||||||||  ||| |||||| | |||||||||||||||||||||||       ||||||||||||||||||||| || ||    
T  43852111 tgtattgtacatagccttaccctgttttttacagaagaggtt-ttttcaggacttgaacccgtgac-------tcacatgacaacaactttacc-gttgc 43852021  T
Q  276 gccaaggttacccctcaga 294  Q
     |||||| | |||||||||    
T  43852020 accaaggctccccctcaga 43852002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 7879773 - 7879730
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  7879773 aaagggcaacccggtgcactgaagctcccgcatacgcagggtcc 7879730  T

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Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 21566509 - 21566439
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgac 241  Q
    ||||||||||||||||||| ||| | |||||||  ||||||||||| |||| || |||||||||| |||||    
T  21566509 tttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtttccaagacttgaacctgtgac 21566439  T

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Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 25198738 - 25198679
Alignment:
Q  229 ttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttaccc 288  Q
    |||| ||| ||| |||| ||||| ||||||||||||||||||||  ||||||||||||||    
T  25198738 ttgatcccatgatctttcagtcatatgacaacaactttaccagttacgccaaggttaccc 25198679  T

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Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 45018923 - 45018966
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||    
T  45018923 aaagggcaacctggtgcactaaagctcccgcatacgcagggtcc 45018966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 23231642 - 23231573
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttacc--ctgttttacacaagaggctgttttcaggact 229  Q
    |||||||| |||| |||||||| ||||||||||||||   | |||||||||||||||| ||| |||||||    
T  23231642 gggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctctttccaggact 23231573  T

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Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 47716597 - 47716560
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    |||||||||||||||||||| | |||||||||||||||    
T  47716597 taaagggcaacccggtgcaccaaagctcccgcatatgc 47716560  T

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Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 1524281 - 1524345
Alignment:
Q  205 tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    |||||||||||||||||  | |||||||||  ||||||||| |||| | ||||||| ||||||||    
T  1524281 tacacaagaggctgtttataagacttgaacttgtgacctttcagtctcgtgacaaccactttacc 1524345  T

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Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 5814514 - 5814422
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctcaga 294  Q
    ||||||| |||||| | ||| ||  ||||||||||||||| ||  | |||||| ||||||||||||||  | |||||||||| ||| ||||||    
T  5814514 ttttacataagaggttctttccaaaacttgaacccgtgactttccaatcacataacaacaactttaccgattgcgccaaggtaacctctcaga 5814422  T

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Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 18747621 - 18747581
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcagggt 165  Q
    ||||||| |||||||||||| |||||||||||| |||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggt 18747581  T

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Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 21566562 - 21566530
Alignment:
Q  133 cccggtgcactagagctcccgcatatgcagggt 165  Q
    |||||||||||| ||||||||||||||||||||    
T  21566562 cccggtgcactaaagctcccgcatatgcagggt 21566530  T

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Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 27629769 - 27629729
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcaggg 164  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  27629769 aaagggcaacccggtgcactgaagctaccgcatatgcaggg 27629729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 29907552 - 29907520
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcata 157  Q
    |||||||||||||||||||| ||||||||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcata 29907520  T

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Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 36267868 - 36267900
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagcct 194  Q
    |||||| ||||||||||||||||||||||||||    
T  36267868 gggtccaaccatttggtgtattgtacgcagcct 36267900  T

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Target: chr6 (Bit Score: 123; Significance: 5e-63; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 1347097 - 1346918
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  1347097 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 1346998  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    | |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  1346997 gtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1346918  T

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Target: chr6; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 1354757 - 1354936
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  1354757 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 1354856  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  1354857 gaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1354936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 294
Target Start/End: Original strand, 29355855 - 29356042
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgttt--tac 207  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            |||||||  ||||||||||||||||||||||||||||||  |||    
T  29355855 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttac 29355954  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa-ctttaccagtggcgccaaggttacccctcaga 294  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||| | |||||||||||||||||||    
T  29355955 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggttacccctcaga 29356042  T

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Target: chr6; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 162 - 281
Target Start/End: Original strand, 12221965 - 12222088
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  12221965 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgac 12222064  T
Q  258 aacaactttaccagtggcgccaag 281  Q
    ||||||||||||||| ||||||||    
T  12222065 aacaactttaccagttgcgccaag 12222088  T

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Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 8409311 - 8409196
Alignment:
Q  179 gtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcg 276  Q
    |||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||| |||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcg 8409212  T
Q  277 ccaaggttacccctca 292  Q
    ||||||||||||||||    
T  8409211 ccaaggttacccctca 8409196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 289
Target Start/End: Original strand, 3815126 - 3815256
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||||||||||||||||||||| | |||| | ||||  |||||| || |||||| ||||||||||||||||||| ||| ||||||||||||    
T  3815126 agggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgaca 3815225  T
Q  259 acaactttaccagtggcgccaaggttacccc 289  Q
    |||||||||||||| ||||||||||||||||    
T  3815226 acaactttaccagttgcgccaaggttacccc 3815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 9161209 - 9161076
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||  || |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  9161209 gggtcccaccattattgatgtattgtacgcagccttactctgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgaca 9161110  T
Q  259 acaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||  | ||| |||||||||||||||    
T  9161109 acaactttaccgattgcgtcaaggttacccctca 9161076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 28007711 - 28007604
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgacctttt--agtcacatgacaa 259  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||   ||||||||||||    
T  28007711 gggtcccagcatttggtgtattgtacgcagcctgaccctgttttacacaagaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaa 28007612  T
Q  260 caacttta 267  Q
    ||||||||    
T  28007611 caacttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 13905034 - 13905158
Alignment:
Q  167 ccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaact 264  Q
    ||||||||||||| |||||| ||||||||||||||||||  ||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  13905034 ccaccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaact 13905133  T
Q  265 ttaccagtggcgccaaggttacccct 290  Q
    ||||| || ||||||||||| |||||    
T  13905134 ttacc-gttgcgccaaggttccccct 13905158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 1941940 - 1941809
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||| || ||||| || ||| ||||||  ||||| |||||||    
T  1941940 gggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaa 1941841  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| || |||||||||||||||    
T  1941840 caactttaccagttgcaccaaggttacccctc 1941809  T

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Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 2166460 - 2166587
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||| ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||    
T  2166460 gggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataac 2166559  T
Q  258 aacaactttaccagtggcgccaaggttac 286  Q
    ||||||||||| ||| ||| |||||||||    
T  2166560 aacaactttactagttgcg-caaggttac 2166587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 2178093 - 2178220
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||| ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||    
T  2178093 gggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataac 2178192  T
Q  258 aacaactttaccagtggcgccaaggttac 286  Q
    ||||||||||| ||| ||| |||||||||    
T  2178193 aacaactttactagttgcg-caaggttac 2178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 15866089 - 15866218
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacac--aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||  ||  |||||||||||| ||||| |||||||| |||||||| | ||||||| |||    
T  15866089 gggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaa 15866186  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| | ||||||||||||||||    
T  15866187 caactttaccagttgggccaaggttacccctc 15866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 14975172 - 14975262
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||| || |||||||||||| ||||||    
T  14975172 ttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggttatccctca 14975262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 25557858 - 25557743
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |  |||||||||||||||||||||||||||||||||||||||||    
T  25557858 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgttttacacaa 25557759  T
Q  212 gaggctgttttcagga 227  Q
    |||||||||| |||||    
T  25557758 gaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 26097293 - 26097178
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |  |||||||||||||||||||||||||||||||||||||||||    
T  26097293 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgttttacacaa 26097194  T
Q  212 gaggctgttttcagga 227  Q
    |||||||||| |||||    
T  26097193 gaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 23240874 - 23240971
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||| ||||||    
T  23240874 gggtcccaccaattggtatattgtacgcaaacttaccctgttttacacaagaggctgtttccaggacttgcacctgtgacctttcagtcacgtgacaa 23240971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 18277243 - 18277343
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||  ||||| || ||||||||||  |||||||||||||||||||| || || ||||||||||||||||||||||||| |||||    
T  18277243 gggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgtttccaagatttgaacccgtgaccttttagtcacaggacaa 18277342  T
Q  260 c 260  Q
    |    
T  18277343 c 18277343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 20400753 - 20400625
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||| | |||| ||||| ||||||||| |||||||||||||  |||||||||  ||||| ||  ||||||||| ||||||||| ||||||||||||    
T  20400753 agggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgaca 20400654  T
Q  259 acaactttaccagtggcgccaaggttacc 287  Q
    |||||| ||||| | ||||||||||||||    
T  20400653 acaactataccaattgcgccaaggttacc 20400625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 6024306 - 6024187
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    |||||||||||||||||| |||||| ||||||  ||||||||||||||||  |||| ||||| ||||||||||  | |||||||||||||||||||||||    
T  6024306 ttggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccag 6024207  T
Q  272 tggcgccaaggttacccctc 291  Q
    | ||| |||  |||||||||    
T  6024206 ttgcgtcaaaattacccctc 6024187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 12889497 - 12889402
Alignment:
Q  176 ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    ||||||||||| |||||||| |||||||||  ||||||||||||||||||| |||||||||| ||||||||| | |||| ||||||||||||||||    
T  12889497 ggtgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 14553598 - 14553485
Alignment:
Q  162 gggtcccacca--tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||  ||||||||||| ||| |||||||||||| ||||  |||||||| ||| ||| ||||||||||||| ||||||||| |||||||||||    
T  14553598 gggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt-agtcacatgac 14553500  T
Q  258 aacaactttaccagt 272  Q
    |||||||||||||||    
T  14553499 aacaactttaccagt 14553485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 33138919 - 33138838
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtga 240  Q
    ||||||||||||||||||||||||||||| ||||||| |||  ||||| |||||||| ||||| ||||||||||||||||||    
T  33138919 agggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 7947433 - 7947543
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    |||||||||||||||||||||||||||||  ||||||||| |||| ||||| ||||| ||||||| ||||||||| ||||||   ||| ||||||||||     
T  7947433 tttggtgtattgtacgcagccttaccctggtttttacacaggaggttgtttccaggagttgaaccggtgacctttcagtcacgcaacaccaactttacc- 7947531  T
Q  271 gtggcgccaagg 282  Q
    || |||||||||    
T  7947532 gttgcgccaagg 7947543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 12063510 - 12063424
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttaccc 288  Q
    ||||| |||||||||| |||  |||||||||||||||||||||| |||| ||||| |||||||||| |||| || ||||||||||||    
T  12063510 ttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggttaccc 12063424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 24734676 - 24734591
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacc 287  Q
    |||||||||||||| |||||  |||| ||||||   |||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  24734676 ttttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgccaatgttacc 24734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 32728211 - 32728314
Alignment:
Q  167 ccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaact 264  Q
    |||| ||||||| |||||||| ||| |||||||||||||  ||| |||||| ||||| ||  ||||||| | ||||||||| ||||||||||||||||||    
T  32728211 ccactatttggtatattgtacacagtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaact 32728310  T
Q  265 ttac 268  Q
    ||||    
T  32728311 ttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 33922942 - 33923009
Alignment:
Q  224 aggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||| ||||| ||| ||||| ||||||||||||||||| || ||||||||||||||||||    
T  33922942 aggacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttacccctc 33923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 22967261 - 22967124
Alignment:
Q  162 gggtcccaccatttggtgtattgtac------gcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    |||||||||||||||||||||||||       ||||||||| ||| |||| |||||||| | ||||| || |||||||||  ||||||||  ||||||||    
T  22967261 gggtcccaccatttggtgtattgtatttgtatgcagccttatcctatttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacat 22967162  T
Q  255 gacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||| ||||||| |||  |||| ||||||||||||||    
T  22967161 gacaataactttatcagatgcgcgaaggttacccctca 22967124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 23821132 - 23821269
Alignment:
Q  162 gggtcccaccatttggtgtattgtac------gcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    |||||||||||||||||||||||||       ||||||||| ||| |||| |||||||| | ||||| || |||||||||  ||||||||  ||||||||    
T  23821132 gggtcccaccatttggtgtattgtatttgtatgcagccttatcctatttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacat 23821231  T
Q  255 gacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||| ||||||| |||  |||| ||||||||||||||    
T  23821232 gacaataactttatcagatgcgcgaaggttacccctca 23821269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 27855500 - 27855600
Alignment:
Q  175 tggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    ||||||||| |||||||||||||||| ||||   ||||| || ||||||||| |||||| ||| || ||| ||| ||||||||||||| |||||||||||    
T  27855500 tggtgtattatacgcagccttaccctatttttttacacaggaagctgttttcgggacttaaactcgcgacatttcagtcacatgacaaaaactttaccag 27855599  T
Q  272 t 272  Q
    |    
T  27855600 t 27855600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 263
Target Start/End: Original strand, 4136590 - 4136670
Alignment:
Q  185 tacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    |||||| |||||||||||  ||||||||||| | |||||| |||||||||||||||||| |||||||||| || |||||||    
T  4136590 tacgcaaccttaccctgtattttacacaagatgttgtttttaggacttgaacccgtgacattttagtcacgtggcaacaac 4136670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 24097662 - 24097545
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||    |||| ||||||||||||||||||  | ||||||||||| ||  ||||||| ||| |||||||||| ||| ||||||||     
T  24097662 gggtcccaccatttggt----tgtaagcagccttaccctgttttttatacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgacat 24097567  T
Q  260 caactttaccagtggcgccaag 281  Q
    ||| ||||||||| | ||||||    
T  24097566 caattttaccagttgtgccaag 24097545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 2755485 - 2755583
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgttttac--acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 269  Q
    |||||||||||||||||||||||| ||| ||||    | |||||| ||||| || ||||||||||   ||||||| |||||||||||||||||||||||    
T  2755485 tttggtgtattgtacgcagccttagcctatttttggtataagaggatgtttgcaagacttgaacctacgacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 23930177 - 23930303
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttg-aacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||| |||||||||||||||| |  |    | ||||||||| ||| |||||| || |||||| ||| |||||||||| || |||||||||||    
T  23930177 gggtcccaccatctggtgtattgtacgcaactatcttgttttttacacatgagactgtttccatgacttggaactcgtgacctttgagacacatgacaac 23930276  T
Q  261 aactttaccagtggcgccaaggttacc 287  Q
    | |||||  ||| ||||||||||||||    
T  23930277 atctttatgagttgcgccaaggttacc 23930303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 32579510 - 32579436
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgttttcaggacttgaacc 235  Q
    |||||||||||||||| ||||||||||||| |||||| |  ||||| || ||||||||||| |||||||||||||    
T  32579510 gggtcccaccatttggggtattgtacgcaggcttaccgtatttttataccagaggctgtttccaggacttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 15865907 - 15865991
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttt 245  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||   ||  |||||||||||| ||||| |||||||| ||||||||    
T  15865907 gggtcccaccatttggtgtatt--acgcagctttaccctgtttttttacgtaagaggctgtttccaggaattgaacccatgaccttt 15865991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 12892144 - 12892101
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||    
T  12892144 aaagggcaacccggtgcactaaagctcccgcatatgcggggtcc 12892101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 19649255 - 19649338
Alignment:
Q  198 cctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaag 281  Q
    ||||||||| | ||| |||| ||||||| | || || |||||| |||| ||||||||||||||||||||| |||| ||||||||    
T  19649255 cctgttttagataaggggctattttcagaatttaaatccgtgatctttcagtcacatgacaacaactttatcagttgcgccaag 19649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 159
Target Start/End: Complemental strand, 25997784 - 25997749
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatg 159  Q
    ||||||||||||||||||||||||||||||||||||    
T  25997784 aaagggcaacccggtgcactagagctcccgcatatg 25997749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 17448389 - 17448324
Alignment:
Q  182 ttgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttt 245  Q
    ||||||||||||||||||||||||  |||||| | | ||||||||  |||||||||||||||||||    
T  17448389 ttgtacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgaccttt 17448324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 427
Target Start/End: Original strand, 7472856 - 7472909
Alignment:
Q  374 tcttctaatctcattgttggaattgatttcacaaagagcaatgagtggacaggt 427  Q
    ||||| ||||| ||| ||||||| |||||||| |||||||||||||||||||||    
T  7472856 tcttccaatcttattcttggaatcgatttcaccaagagcaatgagtggacaggt 7472909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 8417501 - 8417445
Alignment:
Q  216 ctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt 272  Q
    |||||| || ||| ||||| |||||| ||| ||||||||||||||||||||||||||    
T  8417501 ctgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagt 8417445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 17432395 - 17432332
Alignment:
Q  192 ccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcaca 253  Q
    ||||||||||||||  |||||||| | ||||| ||||||||||||| ||||||||| |||||||    
T  17432395 ccttaccctgttttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 6808530 - 6808487
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||    
T  6808530 aaagggcaacccggtgcactaaagctcccgcatacacagggtcc 6808487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 13267860 - 13267817
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  13267860 aaagggcaacccggtgcactgaagctcccgcatacgcagggtcc 13267817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 32068179 - 32068074
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| |||||||||||  |||| ||| ||||||||  ||||||||||   ||| || |||||||||  |||||||||  ||||| |||||    
T  32068179 gggtcccaccattttggtgtattgtaaacagcattatcctgttttttacacaagagg---tttccaagacttgaacatgtgacctttcggtcacgtgaca 32068083  T
Q  259 acaacttta 267  Q
    |||||||||    
T  32068082 acaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 12886048 - 12886006
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||    
T  12886048 aaagggcaacccggtgcactaaagctcccacatacgcagggtc 12886006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 17432485 - 17432451
Alignment:
Q  122 ttaaagggcaacccggtgcactagagctcccgcat 156  Q
    ||||||||||||||||||||||| |||||||||||    
T  17432485 ttaaagggcaacccggtgcactaaagctcccgcat 17432451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 383757 - 383802
Alignment:
Q  121 attaaagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    ||||||||||||||||||| |||  |||||||||||| ||||||||    
T  383757 attaaagggcaacccggtggactgaagctcccgcatacgcagggtc 383802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 10734903 - 10734948
Alignment:
Q  122 ttaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||| ||||||| |||| |||||||||||| |||||||||    
T  10734903 ttaaagggcagcccggtggactaaagctcccgcatacgcagggtcc 10734948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 205
Target Start/End: Original strand, 14341134 - 14341163
Alignment:
Q  176 ggtgtattgtacgcagccttaccctgtttt 205  Q
    ||||||||||||||||||||||||||||||    
T  14341134 ggtgtattgtacgcagccttaccctgtttt 14341163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 30712 - 30533
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||| |||||||||||||||||    
T  30712 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgttttacacaa 30613  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  30612 gaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 30533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 8e-59; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 21779261 - 21779441
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||||||||||||||||    
T  21779261 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacacaa 21779360  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||    
T  21779361 gaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttacccctca 21779441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 12023969 - 12024099
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12023969 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 12024068  T
Q  261 aactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||| ||||||||||||||||||    
T  12024069 aactttaccagttgcgccaaggttacccctc 12024099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 23397900 - 23397719
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacaca 210  Q
    ||||||||||||||||||||||||||||||||||||| |||||||            ||||||||||||||||||||| ||||||||||| |||||||||    
T  23397900 taaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctattttacaca 23397801  T
Q  211 agaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  23397800 agaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctca 23397719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 8455366 - 8455497
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  8455366 gggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaa 8455465  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| ||||||||||||||||||    
T  8455466 caactttaccagttgcgccaaggttacccctc 8455497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 9671314 - 9671134
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  9671314 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 9671215  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttt-tagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||| ||||| ||||||||||||| |||  ||||||||||||||||||||||| || ||||||||||||||||||    
T  9671214 gaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaaggttacccctc 9671134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 14530456 - 14530271
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgtttt--a 206  Q
    |||||||||||||||||||||| |||||||||||| |||||||||            |||||||  |||||||||||||| ||||||||||||||||  |    
T  14530456 taaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgtttttta 14530357  T
Q  207 cacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
     |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  14530356 tacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 14530271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 10543835 - 10543653
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccattt--ggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            ||||||||  ||||||||||||||||||||||||||||||  ||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 10543736  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccct 290  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  10543735 acaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccct 10543653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 161 - 289
Target Start/End: Complemental strand, 11514522 - 11514392
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||| ||||| ||||||||||||||||  ||||||||||||    
T  11514522 agggtcccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgaca 11514423  T
Q  259 acaactttaccagtggcgccaaggttacccc 289  Q
    |||||||||||||| ||||||||||||||||    
T  11514422 acaactttaccagttgcgccaaggttacccc 11514392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 22371139 - 22371010
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||||   |||||||||||||||    
T  22371139 gggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacgaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaaca 22371041  T
Q  262 actttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||| | |||||||||||||||||    
T  22371040 actttaccagttgggccaaggttacccctca 22371010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 165 - 288
Target Start/End: Original strand, 25249791 - 25249915
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgttt-tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaac 263  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||  |||||||||||||||||    
T  25249791 tcccaccatttggtgtattgtacgcagccttaccctgtttgtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaac 25249890  T
Q  264 tttaccagtggcgccaaggttaccc 288  Q
    ||||||| | |||||||||||||||    
T  25249891 tttaccaattgcgccaaggttaccc 25249915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 173 - 290
Target Start/End: Original strand, 24200686 - 24200805
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacca 24200785  T
Q  271 gtggcgccaaggttacccct 290  Q
    || ||  |||||||||||||    
T  24200786 gttgcatcaaggttacccct 24200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 17705567 - 17705449
Alignment:
Q  175 tggtgtattgtacgcagccttaccctgtt--ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt 272  Q
    ||||||||||||| ||||||||| |||||  ||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagt 17705468  T
Q  273 ggcgccaaggttacccctc 291  Q
     || |||||||||||||||    
T  17705467 tgcaccaaggttacccctc 17705449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 25079767 - 25079900
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||   |||||||||| |||||  | |||||||||||||||||||  ||||||||||||    
T  25079767 gggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgaca 25079866  T
Q  259 acaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||| |||||||||||||||||||    
T  25079867 acaactttaccagttgcgccaaggttacccctca 25079900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 27573700 - 27573581
Alignment:
Q  167 ccaccatttggtgtattgtacgcagccttaccctgttt-tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactt 265  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |||||||||||  |||||||| |||||||||||||||||||    
T  27573700 ccaccatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactt 27573601  T
Q  266 taccagtggcgccaaggtta 285  Q
    ||||||| ||||||||||||    
T  27573600 taccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 17668087 - 17667975
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||| |||||||||||||||||||||||||||||||||||  |||||||||||||| | ||| ||||||||||||||||||||||  |||||||||||||    
T  17668087 gggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaa 17667988  T
Q  260 caactttaccagt 272  Q
    |||||||||||||    
T  17667987 caactttaccagt 17667975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 289
Target Start/End: Complemental strand, 17896345 - 17896215
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||   |||||||||| |||||  |||||||||| |||||||||||  |||||||||||    
T  17896345 gggtcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgaca 17896246  T
Q  259 acaactttaccagtggcgccaaggttacccc 289  Q
    |||||||||||||| ||| ||||||||||||    
T  17896245 acaactttaccagttgcgtcaaggttacccc 17896215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 7214604 - 7214488
Alignment:
Q  177 gtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtgg 274  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||| || ||||||||||| |||||||| |||||||||||||||||||||||||| |    
T  7214604 gtgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttg 7214505  T
Q  275 cgccaaggttacccctc 291  Q
     ||||| ||||||||||    
T  7214504 tgccaaagttacccctc 7214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 17623649 - 17623537
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||| |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||  |||||||||||||||||||||  |||| ||||||||    
T  17623649 gggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaa 17623550  T
Q  260 caactttaccagt 272  Q
    |||||||||||||    
T  17623549 caactttaccagt 17623537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 289
Target Start/End: Original strand, 19977767 - 19977893
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    |||||||||||||||||||||||||| ||||| ||| ||||  ||| |||||||||||| ||| |||||||||||||||||||  |||||||||||||||    
T  19977767 tcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaa 19977866  T
Q  263 ctttaccagtggcgccaaggttacccc 289  Q
    ||| ||||||  |||||||||||||||    
T  19977867 cttcaccagttccgccaaggttacccc 19977893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 99315 - 99421
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||| ||||||||||||||||||||||||||||| || ||||||  ||||||||||||||  |||||||||||||||||||||| |||||| ||||||||    
T  99315 gggttccaccatttggtgtattgtacgcagccttgccatgttttttacaagaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaaca 99414  T
Q  262 actttac 268  Q
    |||||||    
T  99415 actttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 5450371 - 5450263
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||| |||||||||||||||||||||||||| ||||||   |||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||    
T  5450371 gggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgaca 5450272  T
Q  259 acaacttta 267  Q
    |||||||||    
T  5450271 acaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 23145747 - 23145857
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||| |||||||||||||||||||||||| |||||||  ||||||||| ||||||||| |||||||||||||||||||| ||||||   |||    
T  23145747 agggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctaca 23145846  T
Q  259 acaactttacc 269  Q
    |||||||||||    
T  23145847 acaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 23557537 - 23557647
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||| |||||||||||||||||||||||| |||||||  ||||||||| ||||||||| |||||||||||||||||||| ||||||   |||    
T  23557537 agggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctaca 23557636  T
Q  259 acaactttacc 269  Q
    |||||||||||    
T  23557637 acaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 254
Target Start/End: Complemental strand, 10546298 - 10546153
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctg---ttttaca 208  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            ||||||||||||||||||||||||||||||||||   ||||| |    
T  10546298 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttata 10546199  T
Q  209 caagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  10546198 caagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 14444813 - 14444720
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  14444813 gggtcccaccatttggtgtatcgtacacagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 5841115 - 5840982
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  || ||||||||||||| ||||||||| ||||  |||||| |||||||||  |||||||||||||||||||||  |||||||||||    
T  5841115 gggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgac 5841016  T
Q  258 aacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||| || | || |||||||||||||||    
T  5841015 aacaactttatcatttgcaccaaggttacccctc 5840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 25641586 - 25641487
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||| ||||||||||||||||||| | |||||||||||| |||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  25641586 gggtcccacaatttggtgtattgtacgcaactttaccctgttttcacacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 21377123 - 21377232
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  |||||||||| |||||  | ||||||||| ||| |||||| |||||||||||||    
T  21377123 gggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaa 21377222  T
Q  260 caactttacc 269  Q
    ||||||||||    
T  21377223 caactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 26684671 - 26684803
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttacc---ctgttttacacaagagg-ctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||| || |||||||||||||||||||    | |||||||||||||| ||||||||||||||| ||||  |||||||| | ||||||||||    
T  26684671 ggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgaca 26684770  T
Q  259 acaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||| |||| || ||||||||||    
T  26684771 acaactttaccagttgcgctaaagttacccctc 26684803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 39914355 - 39914467
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||| |||||||||||| || ||||||||||||||   |||||||||| ||||| ||| |||||| |||||||||||  ||||||||||||    
T  39914355 gggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgaca 39914454  T
Q  259 acaactttaccag 271  Q
    |||||||||||||    
T  39914455 acaactttaccag 39914467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 123 - 270
Target Start/End: Original strand, 40416870 - 40417031
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtttt--aca 208  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||            || || |||||||||||||| ||||||| |||||||||  | |    
T  40416870 taaagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttata 40416969  T
Q  209 caagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    ||||||| ||||| || |||||||||||||||||||  ||||||||||||||||||||||||    
T  40416970 caagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 32781338 - 32781467
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| |  ||||||||| |||||||||| ||  ||||  |||    
T  32781338 gggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaactcgtgacctttcagcaacattgcaa 32781437  T
Q  260 caactttaccagtggcgccaaggttacccct 290  Q
    ||||||||||| | ||||||||||| |||||    
T  32781438 caactttacca-ttgcgccaaggttccccct 32781467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 36871626 - 36871509
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagg-----------gtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaa 211  Q
    ||||||||||||||||||||| |||||||||||| |||||           |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36871626 aaagggcaacccggtgcactaaagctcccgcatacgcaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacaa 36871527  T
Q  212 gaggctgttttcaggact 229  Q
    |||||||||| |||||||    
T  36871526 gaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 17380287 - 17380391
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttt-tacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||| ||| |||||||||||||| || || ||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||  |||||||||||||    
T  17380287 gggttccatcatttggtgtattgcacacaaccttaccctgtttatacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaac 17380386  T
Q  261 aactt 265  Q
    |||||    
T  17380387 aactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 4516401 - 4516522
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||| ||||||||||||||||||| || |||||||||  ||||||||||||||||  || |||||||   ||||||||| |||||| ||||||    
T  4516401 gggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaa 4516500  T
Q  260 caactttaccagtggcgccaagg 282  Q
    |||||||||| || |||||||||    
T  4516501 caactttacc-gttgcgccaagg 4516522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 290
Target Start/End: Complemental strand, 14544131 - 14544018
Alignment:
Q  180 tattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcg 276  Q
    ||||| |||||| |||||||||||||   |||||||||||||||| ||| || || ||| || |||||| |||||||||||||||||||||||| | |||    
T  14544131 tattgcacgcagtcttaccctgtttttctacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcg 14544032  T
Q  277 ccaaggttacccct 290  Q
    ||||||||||||||    
T  14544031 ccaaggttacccct 14544018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 24860045 - 24860157
Alignment:
Q  169 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttta 267  Q
    |||||||||||||||||||||||||| ||| |||||| |||| ||||| ||||| |||| ||| ||||||| |||||  |||||||||||||||| ||||    
T  24860045 accatttggtgtattgtacgcagcct-accatgtttttacaccagaggttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaatttta 24860143  T
Q  268 ccagtggcgccaag 281  Q
    ||||| ||||||||    
T  24860144 ccagttgcgccaag 24860157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 33795370 - 33795261
Alignment:
Q  162 gggtcccaccatttggtgtatt-gtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||  || ||||||| ||||| | ||||||||||||||||||||| | |||| |||||    
T  33795370 gggtcccaccata-ggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatcacgtgaca 33795272  T
Q  259 acaactttacc 269  Q
    |||||||||||    
T  33795271 acaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 29419946 - 29420048
Alignment:
Q  173 tttggtgtattgtacgcagccttac----cctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaacttt 266  Q
    |||||||||||||||||||||||||    ||||||||  |||||||||| ||||| |||||||||||| |||||||||| |||||  |||||||||||||    
T  29419946 tttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaacttt 29420045  T
Q  267 acc 269  Q
    |||    
T  29420046 acc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 44604907 - 44604827
Alignment:
Q  193 cttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt 272  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||| ||||||||  ||||||||||||||||||||| ||||    
T  44604907 cttaccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagt 44604827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 31158489 - 31158598
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    ||||||||||||||  ||| ||||||| |||  |||||||||||||  || |||||||||||||| | ||||| ||||| |||||||| |||||||||||    
T  31158489 gggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgttttgaagactttaacccttgacctttcagtcacatgac 31158588  T
Q  258 aacaacttta 267  Q
    ||||||||||    
T  31158589 aacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 19615065 - 19614981
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    ||||| |||||||||||| |||||||||||||  | |||||||| |||||  |||||||||||||||||||||| ||||||||||    
T  19615065 ttggtatattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 44643608 - 44643497
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg---ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||||||  ||||||||||||||||| |||   ||||||  |||||||| |||  || |||||||| |||||||||| ||||||||||      
T  44643608 gggtcccaccatttggtacattgtacgcagccttactctgtttttttacggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatg 44643509  T
Q  259 acaactttacca 270  Q
    ||||||||||||    
T  44643508 acaactttacca 44643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 2003592 - 2003678
Alignment:
Q  168 caccatttggtgtattgtacgcagccttaccctg---ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtca 251  Q
    ||||||||| ||||||||||||| ||||||||||   |||||| |||| |||||||| ||||||||| ||||||||||||| |||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttcagtca 2003678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 40762283 - 40762345
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgttt 221  Q
    |||||||||||||||||||||||||||| ||||||||||  | ||||||||||||||||||||    
T  40762283 agggtcccaccatttggtgtattgtacgtagccttacccagttttttacacaagaggctgttt 40762345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 44521426 - 44521532
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    |||| |||||||||||||| || ||||||||||| ||||||  |||||||||  ||||| || || |||||| |||||||||| |||||| ||| |||||    
T  44521426 tcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtcacgtgataacaa 44521525  T
Q  263 ctttacc 269  Q
    |||||||    
T  44521526 ctttacc 44521532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 45235867 - 45235976
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtt---ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| |||||||  ||| ||||||||||| ||   ||||| ||||| ||||||  ||||||||||| ||||| |||| |||||||||| |    
T  45235867 gggtcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgaga 45235966  T
Q  259 acaactttac 268  Q
    ||||||||||    
T  45235967 acaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 30826122 - 30826052
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgttttcaggactt 230  Q
    ||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||||| || |||||    
T  30826122 agggttccaccatttggtgtattgtacgcaaccttaccctatttttacacaagaggctgtttccaagactt 30826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 35017849 - 35017781
Alignment:
Q  214 ggctgttttcaggacttgaacccgtgaccttt-tagtcacatgacaacaactttaccagtggcgccaagg 282  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| || |||||||||    
T  35017849 ggctgttttcaggacttaaacccgtgacctttcaagtcacatgacaacaactttacc-gttgcgccaagg 35017781  T

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Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 39189558 - 39189603
Alignment:
Q  247 agtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  39189558 agtcacatgacaacaactttaccagttgcgccaaggttacccctca 39189603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 15296468 - 15296533
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaaccc 236  Q
    |||||| ||||||||||||||||||||||  |||||||||| ||||||||| | ||||||||||||    
T  15296468 tttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttccgggacttgaaccc 15296533  T

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Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 31821393 - 31821491
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||| ||||||||||||||||| || ||||||||| ||||  |||   ||||||||  | ||||||||| |||||||||| |||||||| |||||    
T  31821393 gggtcccatcatttggtgtattgtacacaaccttaccctattttttacacacggctgtttctacgacttgaactcgtgacctttcagtcacataacaac 31821491  T

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Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 44449445 - 44449529
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgttttaca--caagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||| |||||| |||| |||||| |||||||||| ||| ||||||    
T  44449445 tttggtgtattgtacgcagccttatcctgtttttcattcaagaggttgtttttagga-ttgaactcgtgacctttcagttacatga 44449529  T

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Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 13245145 - 13245220
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgacctt 244  Q
    |||||||||||||| ||||| ||||||||||||||||       |||||||||| ||||| |||||||||||| |||||||||    
T  13245145 gggtcccaccatttagtgtaatgtacgcagccttacc-------acacaagaggttgtttccaggacttgaactcgtgacctt 13245220  T

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Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 25632591 - 25632551
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt 205  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  25632591 tcccaccatttggtgtattgtacgcagccttatcctgtttt 25632551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 22371247 - 22371204
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  22371247 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 22371204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 34080236 - 34080193
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| | ||||||||||||||||||||    
T  34080236 aaagggcaacccggtgcactaaaactcccgcatatgcagggtcc 34080193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 39189508 - 39189547
Alignment:
Q  128 ggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  39189508 ggcaacccggtgcactagagctcccgcatatgcggggtcc 39189547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 30864474 - 30864536
Alignment:
Q  169 accatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgttttcaggactt 230  Q
    |||||||||| ||||||||||| |||||||||  |||||||||||||||||||| || |||||    
T  30864474 accatttggtatattgtacgcacccttaccctatttttacacaagaggctgtttccatgactt 30864536  T

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Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 27466262 - 27466311
Alignment:
Q  242 cttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||| ||||    
T  27466262 ctttcagtcacatgacaacaactttaccagttgcgccaatgttacgcctc 27466311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 41409995 - 41409954
Alignment:
Q  126 agggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtcc 41409954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 8576035 - 8575987
Alignment:
Q  119 acattaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||| ||||||||| ||||||| |||| |||||||||    
T  8576035 acattaaagggcaacctggtgcactaaagctcccacatacgcagggtcc 8575987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 17473014 - 17472926
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccct 290  Q
    |||||||||| ||||| |||  | ||| |||||||||||||||| | |||  ||||||||||||||  ||| ||| |||||||||||||    
T  17473014 ttttacacaataggctatttctaagacctgaacccgtgacctttcaatcatttgacaacaactttattagttgcgtcaaggttacccct 17472926  T

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Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 124918 - 124957
Alignment:
Q  128 ggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  124918 ggcaacccggtgcactaaagctcccgcatacgcagggtcc 124957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 3633708 - 3633751
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||    
T  3633708 aaagggcaactcggtgcactaaagctcccgcatatgcggggtcc 3633751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 4795839 - 4795730
Alignment:
Q  163 ggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||||||||| ||||||||| |||||| || | | ||||||   || || ||||||||||||| ||||| |||  ||||| ||| |||||| |||||    
T  4795839 ggtcccaccattttggtgtattgcacgcagtctaatcttgtttttttacgcatgaggctgttttcaagacttcaacaagtgacttttcagtcacgtgaca 4795740  T
Q  259 acaactttac 268  Q
    ||||||||||    
T  4795739 acaactttac 4795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 4852306 - 4852388
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacc 287  Q
    |||| |||||||| |||||| |||||||||||||| |||| |||  ||||||||   |||||||| ||||| || |||||||||||    
T  4852306 tttttcacaagagactgtttgcaggacttgaacccctgacttttcggtcacatg---acaactttgccagttgcaccaaggttacc 4852388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 14444863 - 14444820
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||    
T  14444863 aaagggcaacctggtgcactaaagctcccgcatacgcagggtcc 14444820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 24890496 - 24890453
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt 205  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||    
T  24890496 gggtcccaccaattggtgtattgtatgcagccttaccttgtttt 24890453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 12315712 - 12315786
Alignment:
Q  172 atttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcaggacttgaacccgtgaccttt 245  Q
    |||||||||||||||| ||| ||||||||| ||||  | |||| ||||||| || ||||||||| ||||||||||    
T  12315712 atttggtgtattgtacacagtcttaccctgttttttaataagaagctgtttccatgacttgaactcgtgaccttt 12315786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 40579750 - 40579792
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||||| ||||||||||||  ||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtcc 40579792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 14544202 - 14544157
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtccc 168  Q
    |||||||||||  ||||||||| |||||||||||| ||||||||||    
T  14544202 taaagggcaacttggtgcactaaagctcccgcatacgcagggtccc 14544157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 25249738 - 25249779
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt 165  Q
    ||||||||||||||||||||| ||||| |||||| |||||||    
T  25249738 aaagggcaacccggtgcactaaagctcacgcatacgcagggt 25249779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 25632644 - 25632611
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcata 157  Q
    ||||||||||||||||||||| ||||||||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcata 25632611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 5841165 - 5841129
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    |||||||||| |||||||||| |||||||||||||||    
T  5841165 aaagggcaactcggtgcactaaagctcccgcatatgc 5841129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 39499283 - 39499323
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt 205  Q
    |||||||||||| ||||||||||||||| ||||||| ||||    
T  39499283 tcccaccatttgatgtattgtacgcagctttaccctatttt 39499323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 3e-58; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 35710446 - 35710267
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgca------------gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  35710446 aaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctattttacacaa 35710347  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  35710346 gaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 35710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 41014453 - 41014272
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtttt-acaca 210  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||            |||||||||||||||||||||||||||||||||||||| |||||    
T  41014453 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacaca 41014354  T
Q  211 agaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  41014353 agaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctca 41014272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 8170034 - 8170163
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  8170034 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaaca 8170133  T
Q  262 actttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||| |||||||||||| |||||    
T  8170134 actttaccagttgcgccaaggttagccctc 8170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 124 - 258
Target Start/End: Complemental strand, 32703557 - 32703411
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  32703557 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 32703458  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  32703457 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 38879718 - 38879534
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatt--tggtgtattgtacgcagccttaccctgtttt--ac 207  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            |||||||  |||||||||||||||||||||||||||||||  |     
T  38879718 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttat 38879619  T
Q  208 acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  38879618 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 38879534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 24448975 - 24448844
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||| ||||||||||||||||||||||  |||||||||||||    
T  24448975 gggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaa 24448876  T
Q  260 caactttaccagtggcgccaaggttacccctc 291  Q
    ||||||||||||| ||||||||||||||||||    
T  24448875 caactttaccagttgcgccaaggttacccctc 24448844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 182 - 292
Target Start/End: Original strand, 37024626 - 37024736
Alignment:
Q  182 ttgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaag 281  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||    
T  37024626 ttgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaag 37024725  T
Q  282 gttacccctca 292  Q
    |||||||||||    
T  37024726 gttacccctca 37024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 43334290 - 43334159
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatga 256  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||   ||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  43334290 gggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatga 43334191  T
Q  257 caacaactttaccagtggcgccaaggttaccc 288  Q
    |||||||||||||||| |||||||||||||||    
T  43334190 caacaactttaccagttgcgccaaggttaccc 43334159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 4619154 - 4619284
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||  |||||||||||    
T  4619154 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgac 4619253  T
Q  258 aacaactttaccagtggcgccaaggttaccc 288  Q
    ||||||||||||||| |||||||||||||||    
T  4619254 aacaactttaccagttgcgccaaggttaccc 4619284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 27328839 - 27328704
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||| ||||||||| |||||||||||    
T  27328839 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtcacatgac 27328740  T
Q  258 aacaactttaccagtggcgccaaggttacccctcag 293  Q
    ||||||||||||| | ||| ||||||||||| ||||    
T  27328739 aacaactttaccaattgcgtcaaggttacccttcag 27328704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 1565517 - 1565385
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg---ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    ||||||| |||||||||| ||||||||||||||||   ||   |||||| ||||||| ||||| ||||||||||||||| ||||||| ||||||||||||    
T  1565517 gggtcccgccatttggtgcattgtacgcagccttaatatgtttttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgaca 1565418  T
Q  259 acaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||||| ||||||||||||||||||    
T  1565417 acaactttaccagttgcgccaaggttacccctc 1565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 290
Target Start/End: Complemental strand, 2838860 - 2838733
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcaggacttgaacccgtgaccttt-tagtcacatgacaacaa 262  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    ||||||| | ||||||||||  ||||||||||||||||    
T  2838860 tcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaacaa 2838761  T
Q  263 ctttaccagtggcgccaaggttacccct 290  Q
    ||||||| || |||||||||||||||||    
T  2838760 ctttaccggttgcgccaaggttacccct 2838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 19142993 - 19143102
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||| | |||||||||| |||||||    
T  19142993 gggtcccaccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttccaggacttgaacctgtggcattttagtcacgtgacaac 19143092  T
Q  261 aactttacca 270  Q
    || |||||||    
T  19143093 aattttacca 19143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 173 - 292
Target Start/End: Complemental strand, 22187359 - 22187238
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    ||||||||||||||||||| |||| | ||||||  |||||||||||||||| |||||||| |||| ||||||||| ||||| |||||||||||||||| |    
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttacta 22187260  T
Q  271 gtggcgccaaggttacccctca 292  Q
    || ||||||| |||||||||||    
T  22187259 gttgcgccaaagttacccctca 22187238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 165 - 292
Target Start/End: Complemental strand, 22600536 - 22600407
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||| |   ||||| |||||||||||||||| |||||  |||||||||| |||||    
T  22600536 tcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacatgataacaa 22600437  T
Q  263 ctttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||  || |||||||||||||||    
T  22600436 ctttaccagttacgtcaaggttacccctca 22600407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 208977 - 209086
Alignment:
Q  162 gggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||| ||||||||| | |||||||||||||||||| |||||||||| ||||  ||||||||||||  |||||||||||||||||||||||    
T  208977 gggtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaa 209076  T
Q  260 caactttacc 269  Q
    ||||||||||    
T  209077 caactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 23974840 - 23974734
Alignment:
Q  187 cgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggtt 284  Q
    |||||||||||||| ||||  |||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||||||    
T  23974840 cgcagccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggtt 23974742  T
Q  285 acccctca 292  Q
    ||||||||    
T  23974741 acccctca 23974734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 124 - 288
Target Start/End: Original strand, 22861669 - 22861844
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    |||||||||  |||||||||||||||||||||||||||||||            ||||||||||| ||||||||  |||| |||||  ||||||||||||    
T  22861669 aaagggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgtgagcagtcttact-tgttttacacaa 22861767  T
Q  212 gaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttaccc 288  Q
    ||| ||| ||  |||||||||| ||||||||||| ||||||||||||||||||||| |||| | |||||||||||||    
T  22861768 gagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttaccc 22861844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 7368528 - 7368413
Alignment:
Q  127 gggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacacaagag 214  Q
    |||||||||||||||||||||||||| ||||||||||||||            ||||| |||||||||||||||||||||||||||||||||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttacacaagag 7368429  T
Q  215 gctgttttcaggactt 230  Q
    ||||||| ||||||||    
T  7368428 gctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 262
Target Start/End: Complemental strand, 1405322 - 1405170
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgca------------gggtcccaccatttggtgtattgtacgcagccttaccc--tgttttacac 209  Q
    ||||||||| |||||| |||||||||||||||||||||            |||||||||||||||||||||||||||||  ||||| |  | ||||| |     
T  1405322 aaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatat 1405223  T
Q  210 aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  1405222 aagaggttgtttccaggacttgaacccgtgaccttctagtcacatgacaacaa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 1850723 - 1850624
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||||||||| ||||||||||||| |||||  ||||||| |||||||||| | ||| | ||||||||||||||||||||| |||||||||||||||    
T  1850723 ggtcccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 22907915 - 22908014
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||||   |||||||||||| |||||||| |||||||| |||||    
T  22907915 gggtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 28516483 - 28516593
Alignment:
Q  162 gggtcccaccatttgg-tgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgaca 258  Q
    |||||||||||||| | |||||||||||||||| || ||||||||  |||||||||| ||||| || |||||||||||||||||||| || ||| |||||    
T  28516483 gggtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgaca 28516582  T
Q  259 acaactttacc 269  Q
    |||||||||||    
T  28516583 acaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 30006410 - 30006285
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||| ||||| ||||| |||||||||||||||  ||| | |||||| ||||||| ||||||||| |  |||||||| |||||||||||||    
T  30006410 gggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataagaggttgttttccggacttgaatctatgacctttcagtcacatgacaa 30006311  T
Q  260 caactttaccagtggcgccaaggtta 285  Q
    ||| |||| |||| ||||||| ||||    
T  30006310 caaatttatcagttgcgccaatgtta 30006285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 286
Target Start/End: Complemental strand, 31299705 - 31299591
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgttttac-acaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    |||| ||||||||||||||  |||| ||||||||  ||||||||||||||  |||||||||||  ||||||| | |||||||||||||||||||||||||    
T  31299705 tttgatgtattgtacgcagttttacactgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttaccag 31299606  T
Q  272 tggcgccaaggttac 286  Q
    | || ||||||||||    
T  31299605 ttgcaccaaggttac 31299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 39301197 - 39301087
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttta--cacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    ||||||| ||| |||||| |||||||||||||||  ||||||||| ||||  || |||||||||||||||||||| ||| |||||||||||||||||||     
T  39301197 tttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc- 39301099  T
Q  271 gtggcgccaagg 282  Q
    || |||||||||    
T  39301098 gttgcgccaagg 39301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 42924895 - 42924977
Alignment:
Q  173 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcaca 253  Q
    |||||||||||||||||| ||||||||||||||  |||||||| | |||||||||||||||||| |||||||||| |||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 43574691 - 43574609
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttt--tacacaagaggctgttttcaggacttgaacccgtgacc 242  Q
    ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||  ||||| |||||||||||| |||||||    
T  43574691 gggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 13801817 - 13801895
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaaccc 236  Q
    |||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||| || ||||||||||||||    
T  13801817 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 7097810 - 7097872
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttc 223  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  7097810 gggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgttttc 7097872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 34154813 - 34154908
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgca------------gggtcccaccatttggtgtattgtacgcagccttaccctgtttta 206  Q
    ||||||||||||||||||||||||||| |||||||||||            |||||||||||||||||||||||||||||||||||||||| ||||    
T  34154813 taaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgattta 34154908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 12006378 - 12006500
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaaccc-gtgaccttttagtcacatga 256  Q
    |||||||||||||  |||||||||||| | ||||||||||| ||||  ||| |||||| ||||| ||| |||||||||| ||||||||| ||||||||||    
T  12006378 gggtcccaccattattggtgtattgtatggagccttaccctattttttacataagaggttgtttccag-acttgaaccccgtgacctttcagtcacatga 12006476  T
Q  257 caacaactttaccagtggcgccaa 280  Q
    ||||||||| | |||| |||||||    
T  12006477 caacaacttgagcagttgcgccaa 12006500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 16880698 - 16880757
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtt 220  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  16880698 ggtcacaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 19438759 - 19438703
Alignment:
Q  235 ccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  19438759 ccgtgatcttttagtcatatgacaacaactttaccagttgcgccaaggttacccctc 19438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 41426033 - 41425946
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgacctttta 247  Q
    ||||||||||| ||||||||||||| ||||||||||||||  |||||||||| | | ||||| ||| ||||||||||||||| |||||    
T  41426033 gggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccgtgacatttta 41425946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 16028624 - 16028667
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16028624 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 16028667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 34074620 - 34074717
Alignment:
Q  170 ccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactt 265  Q
    ||||||||||||||| ||||| ||||||  ||||||  ||||||||||||||||  |||||||||||  ||||||||| |||||  ||||||||||||    
T  34074620 ccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 30877562 - 30877607
Alignment:
Q  122 ttaaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  30877562 ttaaagggcaacccggtgcactagagctcccacatatgcagggtcc 30877607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 22025601 - 22025538
Alignment:
Q  189 cagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtc 250  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||| |||||||| ||||    
T  22025601 cagccttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtc 22025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 29334481 - 29334419
Alignment:
Q  162 gggtcccaccatt-tggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttt 221  Q
    ||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  29334481 gggtcccaccattctggtgtattgtacgcagccttaccttgttttttacacaagaggctgttt 29334419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 9794465 - 9794511
Alignment:
Q  216 ctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaa 262  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||    
T  9794465 ctgttttcaggacttgaacccgtgaccttttgatcacatgacaacaa 9794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 18698675 - 18698586
Alignment:
Q  180 tattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    ||||||| |||||| |||| ||||||  |||||||||||||||||| |||||||||||||||| || | |||| ||||||| | |||||||    
T  18698675 tattgtatgcagccgtaccttgttttt-acaagaggctgttttcagtacttgaacccgtgaccgttcaatcacgtgacaaccattttacca 18698586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 19438800 - 19438758
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  19438800 aagggcaacctggtgcactagagctcccgcatatgcagggtcc 19438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 20135691 - 20135623
Alignment:
Q  162 gggtcccaccatt--tggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcagg 226  Q
    |||||||||||||  |||||||||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  20135691 gggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 24903746 - 24903855
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||| ||||| |||||| ||||||| ||  |||||||| ||||  |||||| |||||||||||||||||||  ||| |||| ||| |||||| ||||||    
T  24903746 gggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctgttttcaggacttgtgcccatgacttttcagtcacgtgacaa 24903845  T
Q  260 caactttacc 269  Q
    ||| ||||||    
T  24903846 caaatttacc 24903855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 10634211 - 10634317
Alignment:
Q  177 gtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtgg 274  Q
    ||||||| |||  ||||||||||||  |||| |||| |||| |||||  ||||||||||||| |||||||| |||||| |||||||||||| ||| || |    
T  10634211 gtgtattttaccgagccttaccctgatttttgcacacgaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcacc-gttg 10634309  T
Q  275 cgccaagg 282  Q
    ||||||||    
T  10634310 cgccaagg 10634317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 11462958 - 11462922
Alignment:
Q  126 agggcaacccggtgcactagagctcccgcatatgcag 162  Q
    |||||||||||||||||||||||||||||||||||||    
T  11462958 agggcaacccggtgcactagagctcccgcatatgcag 11462922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 24323755 - 24323862
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||| |||||| ||||| ||||||  ||||||||||  ||||||||||||| ||||| ||| ||||||||   |||| ||| ||||||| || ||    
T  24323755 gggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaacatttgacatttcagtcacacgataa 24323854  T
Q  260 caacttta 267  Q
    ||||||||    
T  24323855 caacttta 24323862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 24360379 - 24360486
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||| |||||| ||||| ||||||  ||||||||||  ||||||||||||| ||||| ||| ||||||||   |||| ||| ||||||| || ||    
T  24360379 gggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaacatttgacatttcagtcacacgataa 24360478  T
Q  260 caacttta 267  Q
    ||||||||    
T  24360479 caacttta 24360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 39079882 - 39079937
Alignment:
Q  226 gacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaagg 282  Q
    ||||||||||||||||||||  |||||||||||||||||||||| || |||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgccaagg 39079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 16957449 - 16957406
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  16957449 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 16957406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 3771424 - 3771318
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||||| |||||||||||| | |||||||||||||||||     | || |||||| || ||||| |||| ||||||||| |||||| ||| ||||    
T  3771424 gggtcccaccaattggtgtattgttcacagccttaccctgtttttttacacagactgtttacatgacttaaacctgtgacctttcagtcacgtgagaaca 3771325  T
Q  262 actttac 268  Q
    || ||||    
T  3771324 acattac 3771318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 17419944 - 17419887
Alignment:
Q  215 gctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt 272  Q
    ||||||| |||||||||||| ||| |||||| |||||||| ||||||| |||||||||    
T  17419944 gctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttaccagt 17419887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 1565567 - 1565524
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  1565567 taaagggcaacccggtgcacta-agctcccacatatgcagggtcc 1565524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 5873374 - 5873441
Alignment:
Q  164 gtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgttttcaggactt 230  Q
    ||||||||| |||||||| |||||  |||||||||||  |||||||||||||||||||| || |||||    
T  5873374 gtcccaccaattggtgtagtgtacttagccttaccctatttttacacaagaggctgtttccacgactt 5873441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 24449025 - 24448982
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||    
T  24449025 aaagggcaacccggtgcactaaagctcctgcatacgcagggtcc 24448982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 25622595 - 25622552
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||    
T  25622595 aaagggcaatccggtgcactaaagctcccgcatacgcagggtcc 25622552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 32354262 - 32354219
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||    
T  32354262 aaagggcaacccggtgcactaaagctcccgcatacacagggtcc 32354219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 41956924 - 41956885
Alignment:
Q  253 atgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  41956924 atgacaacaactttaccagttgcgccaatgttacccctca 41956885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 4810094 - 4809986
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||| |||||| | ||||||| |||| |||| ||| ||||  |||||||||  |||||  |||||||||| || ||| |||||| |||  ||||||    
T  4810094 gggtcccatcatttgatctattgtatgcagtcttaacctatttttgacacaagagattgtttcaaggacttgaatccatgatcttttactcatgtgacaa 4809995  T
Q  260 caactttac 268  Q
    |||||||||    
T  4809994 caactttac 4809986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 13801766 - 13801803
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  13801766 taaagggcaacccggtgcactaaagctctcgcatatgc 13801803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 29184062 - 29184103
Alignment:
Q  125 aagggcaacccggtgcactagagctcccgcatatgcagggtc 166  Q
    |||||||||||||||||||| |||||||||||| ||| ||||    
T  29184062 aagggcaacccggtgcactaaagctcccgcatacgcatggtc 29184103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  229 ttgaacccgtgaccttttagtcacatgacaacaactttacca 270  Q
    ||||||||||||||||  | ||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 4619104 - 4619140
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgc 160  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  4619104 aaagggcaacccggtgcactaaagctctcgcatatgc 4619140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 9794431 - 9794471
Alignment:
Q  165 tcccaccatttggtgtattgtacgcagccttaccctgtttt 205  Q
    |||||| ||||||||||||||| |||| |||||||||||||    
T  9794431 tcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 16880646 - 16880690
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    ||||||| |||||||||||||| |||||||||||| ||| |||||    
T  16880646 taaagggaaacccggtgcactaaagctcccgcatacgcatggtcc 16880690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 43334339 - 43334307
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcat 156  Q
    ||||||||||||||||||||| |||||||||||    
T  43334339 aaagggcaacccggtgcactaaagctcccgcat 43334307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 10100 - 10226
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  10100 gggtcccactatttggtgtattgtacgcagtcttactctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 10199  T
Q  262 actttaccagtggcgccaaggttaccc 288  Q
    ||||||||||| ||| |||||||||||    
T  10200 actttaccagttgcgtcaaggttaccc 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 20428 - 20554
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  20428 gggtcccactatttggtgtattgtacgcagtcttactctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 20527  T
Q  262 actttaccagtggcgccaaggttaccc 288  Q
    ||||||||||| ||| |||||||||||    
T  20528 actttaccagttgcgtcaaggttaccc 20554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 8964 - 8898
Alignment:
Q  226 gacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||| ||||| ||| ||||||||||||||||||| ||| || |||||||||||||||||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctca 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 19292 - 19226
Alignment:
Q  226 gacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    |||||||||| ||||| ||| ||||||||||||||||||| ||| || |||||||||||||||||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctca 19226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 123 - 284
Target Start/End: Complemental strand, 11265 - 11093
Alignment:
Q  123 taaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttacaca 210  Q
    |||||||||||| ||||||||||||||||||||||||||||||||            ||||||||||||||||||| ||||||||||  |||||||||||    
T  11265 taaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgttttacaca 11166  T
Q  211 agaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggtt 284  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||| |||||||||||    
T  11165 agaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaaggtt 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 162 - 289
Target Start/End: Original strand, 13074 - 13202
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaac 260  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  13074 gggtcccaccattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaac 13173  T
Q  261 aactttaccagtggcgccaaggttacccc 289  Q
    ||||||||| || ||||||||||||||||    
T  13174 aactttaccggttgcgccaaggttacccc 13202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 1637 - 1758
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaaca 261  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  1637 gggtcccatcatttggtgtattgtatgcagccttatcctgttttacacaagaggttgttttcaggacttgaacccatgacctttcagtcacatgacaaca 1736  T
Q  262 actttaccagtggcgccaaggt 283  Q
    ||||||||| | ||| ||||||    
T  1737 actttaccaattgcgtcaaggt 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 86; Significance: 6e-41; HSPs: 5)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 24822 - 24949
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||     ||||||||||| |||||||| |||||||||||||    
T  24822 gggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaa 24916  T
Q  260 caactttaccagtggcgccaaggttacccctca 292  Q
    ||||||||||||| |||||||||||||||||||    
T  24917 caactttaccagttgcgccaaggttacccctca 24949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 124 - 282
Target Start/End: Complemental strand, 46966 - 46794
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgtttt--acac 209  Q
    ||||||||||||||||||||| |||||||||||| |||||||||            ||||||||||||||||||||||| ||||||||| ||||  ||||    
T  46966 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacac 46867  T
Q  210 aagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaagg 282  Q
    |||||| ||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  46866 aagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaagg 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 43742 - 43672
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttga 232  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||    
T  43742 gggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaagacgctgtttccagaacttga 43672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 43793 - 43750
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggtcc 167  Q
    |||||||||| | |||||||||||||||||||||||||||||||    
T  43793 aaagggcaactcagtgcactagagctcccgcatatgcagggtcc 43750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 46996 - 47041
Alignment:
Q  223 caggacttgaacccgtgaccttttagtcacatgacaacaactttac 268  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||    
T  46996 caggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 226456 - 226589
Alignment:
Q  163 ggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    |||||||||||||| ||||||||| ||||||||||||||||||   | ||||||||||||||  |||||||||| ||||||||||| |||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaa 226555  T
Q  260 caactttaccagtggcgccaaggttacccctcag 293  Q
    ||||||||||||| |||||||||||||| |||||    
T  226556 caactttaccagttgcgccaaggttaccactcag 226589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 35066 - 35200
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgtttt---acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  35066 agggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgac 35165  T
Q  258 aa-caactttaccagtggcgccaaggttacccctc 291  Q
    ||  |||||||||||| || |||| |||| |||||    
T  35166 aataaactttaccagttgcaccaaagttatccctc 35200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 10895 - 10773
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaa 259  Q
    ||||||||||||||||||||||| |||||||| |||||||||||  |||||||||| |||||||||  |||||||||||||||||  |||||||||||||    
T  10895 gggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttttcagaccttgaacccgtgaccttccagtcacatgacaa 10796  T
Q  260 caactttaccagtggcgccaagg 282  Q
    ||||||||||||| || ||||||    
T  10795 caactttaccagttgcaccaagg 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 286
Target Start/End: Complemental strand, 59064 - 58936
Alignment:
Q  162 gggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||  | |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  59064 gggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgac 58965  T
Q  258 aacaactttaccagtggcgccaaggttac 286  Q
    || || ||||||||| || ||||||||||    
T  58964 aataagtttaccagttgctccaaggttac 58936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 48634 - 48758
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgcagggt------------cccaccatttggtgtattgtacgcagccttaccctgttttacacaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  48634 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 48733  T
Q  212 gaggctgttttcaggacttgaaccc 236  Q
    |||||||||| ||  ||||||||||    
T  48734 gaggctgtttccaccacttgaaccc 48758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 174 - 286
Target Start/End: Complemental strand, 4230 - 4117
Alignment:
Q  174 ttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 271  Q
    ||||||||||||||||| ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||| ||    
T  4230 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactag 4131  T
Q  272 tggcgccaaggttac 286  Q
    | ||| |||||||||    
T  4130 ttgcg-caaggttac 4117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 83903 - 83828
Alignment:
Q  217 tgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctca 292  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttacccctca 83828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 24695 - 24619
Alignment:
Q  214 ggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccct 290  Q
    |||||||| ||||||||||||||||||||||  |||||| |||||||||||||| || | | |||||||||||||||    
T  24695 ggctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggttacccct 24619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 43172 - 43085
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagt--ggcgccaaggttacc 287  Q
    ||||||||||||||||||||  ||||| ||||| |||||||||| | ||||||||||| ||||||||||||   ||||||||||||||    
T  43172 ttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttaccagttgcgcgccaaggttacc 43085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 72924 - 73034
Alignment:
Q  169 accatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc-tgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactt 265  Q
    |||||||||||||||||| ||||||||||| ||  ||||||||||||| | |||||  ||||||||||||||||||        ||||||||||||||||    
T  72924 accatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgac-------acacatgacaacaactt 73016  T
Q  266 taccagtggcgccaaggt 283  Q
    ||||||| ||||||||||    
T  73017 taccagttgcgccaaggt 73034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 23684 - 23590
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacat 254  Q
    ||||||||||||||| |  |||||||||||||| ||||||||||  |||||||||| ||||| || |||||||||||||  ||||| ||||||||    
T  23684 gggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgtaccctttcagtcacat 23590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 8934 - 8848
Alignment:
Q  202 ttttacacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagtggcgccaaggttacccctc 291  Q
    |||||||||||| | ||||| ||||| ||||||| ||||||||  ||||||||||||||||||||||||   ||| ||||||||||||||    
T  8934 ttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttacca---gcgtcaaggttacccctc 8848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 24133 - 24220
Alignment:
Q  124 aaagggcaacccggtgcactagagctcccgcatatgca------------gggtcccaccatttggtgtattgtacgcagccttaccc 199  Q
    ||||||||| ||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||    
T  24133 aaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 3718 - 3798
Alignment:
Q  161 agggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacacaagaggctgttttcaggacttgaacccgtgac 241  Q
    |||||||||||||||||||||||||||||| | ||||| ||| |||||||||| || ||||||||| |||||||||| ||||    
T  3718 agggtcccaccatttggtgtattgtacgcaacgttaccttgtatttacacaag-ggttgttttcagaacttgaacccatgac 3798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 33017 - 32906
Alignment:
Q  161 agggtcccacca-tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgaccttttagtcacatgac 257  Q
    |||||||||||| ||||||||||||||  ||| ||||| |||||||  ||| |||||| | |||   |||||||||||| |||||||| |||||| || |    
T  33017 agggtcccaccaatttggtgtattgtatacagtcttactctgttttttacagaagaggttttttcgcggacttgaacccatgacctttaagtcacgtggc 32918  T
Q  258 aacaactttacc 269  Q
    ||||||| ||||    
T  32917 aacaactatacc 32906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 3629 - 3560
Alignment:
Q  162 gggtcccaccatttggtgtattgtacgcagccttacc--ctgttttacacaagaggctgttttcaggact 229  Q
    |||||||| |||| |||||||| ||||||||||||||   | |||||||||||||||| ||| |||||||    
T  3629 gggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctctttccaggact 3560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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