View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20262_high_43 (Length: 428)

Name: NF20262_high_43
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20262_high_43
NF20262_high_43
[»] scaffold0170 (2 HSPs)
scaffold0170 (20-272)||(9821-10069)
scaffold0170 (290-413)||(10100-10223)
[»] chr4 (80 HSPs)
chr4 (16-143)||(36262777-36262902)
chr4 (20-134)||(5472867-5472981)
chr4 (20-143)||(38166005-38166128)
chr4 (20-148)||(47078436-47078564)
chr4 (20-143)||(29895765-29895888)
chr4 (26-143)||(3159479-3159596)
chr4 (30-143)||(40780871-40780984)
chr4 (20-134)||(1940796-1940907)
chr4 (16-148)||(3507245-3507376)
chr4 (20-126)||(1446804-1446910)
chr4 (26-143)||(7246656-7246773)
chr4 (26-143)||(20128293-20128410)
chr4 (21-142)||(20532420-20532541)
chr4 (26-103)||(38075417-38075494)
chr4 (26-134)||(49260684-49260792)
chr4 (20-131)||(41339417-41339528)
chr4 (20-134)||(42722596-42722710)
chr4 (20-144)||(27248406-27248528)
chr4 (26-133)||(6779195-6779302)
chr4 (20-143)||(8889000-8889123)
chr4 (20-143)||(36145225-36145348)
chr4 (20-143)||(52950060-52950183)
chr4 (20-143)||(53599038-53599161)
chr4 (53-143)||(30317244-30317334)
chr4 (16-130)||(43458587-43458701)
chr4 (26-143)||(15732458-15732575)
chr4 (46-143)||(48015083-48015180)
chr4 (19-143)||(21429278-21429402)
chr4 (46-133)||(3574466-3574553)
chr4 (20-143)||(24166428-24166551)
chr4 (20-103)||(40272381-40272464)
chr4 (20-143)||(55921012-55921135)
chr4 (20-118)||(29588714-29588812)
chr4 (20-126)||(48317302-48317408)
chr4 (26-143)||(14858695-14858811)
chr4 (46-143)||(16645122-16645219)
chr4 (46-134)||(14124020-14124108)
chr4 (52-132)||(16450310-16450390)
chr4 (46-126)||(43468351-43468431)
chr4 (20-124)||(55005335-55005439)
chr4 (20-143)||(2559285-2559408)
chr4 (20-143)||(33647699-33647822)
chr4 (67-137)||(17080068-17080138)
chr4 (20-142)||(41162893-41163015)
chr4 (30-134)||(295552-295655)
chr4 (46-133)||(7741929-7742016)
chr4 (20-143)||(13073516-13073639)
chr4 (46-121)||(14567963-14568038)
chr4 (20-103)||(24850677-24850759)
chr4 (46-143)||(10541020-10541116)
chr4 (44-125)||(20354639-20354720)
chr4 (69-133)||(21192667-21192731)
chr4 (20-143)||(4736575-4736698)
chr4 (20-143)||(14077924-14078047)
chr4 (79-137)||(14597916-14597974)
chr4 (29-143)||(15829686-15829800)
chr4 (53-103)||(20421784-20421834)
chr4 (55-125)||(35359749-35359819)
chr4 (20-134)||(38168235-38168348)
chr4 (58-143)||(47682392-47682476)
chr4 (46-126)||(8064825-8064905)
chr4 (79-134)||(14567276-14567331)
chr4 (68-143)||(37369052-37369127)
chr4 (46-129)||(45721090-45721173)
chr4 (53-143)||(4738629-4738719)
chr4 (52-143)||(31588694-31588787)
chr4 (20-126)||(42722406-42722511)
chr4 (46-103)||(26479999-26480056)
chr4 (17-143)||(33109297-33109425)
chr4 (70-143)||(50485971-50486044)
chr4 (16-136)||(7000498-7000613)
chr4 (64-143)||(18531541-18531620)
chr4 (54-144)||(9548723-9548813)
chr4 (46-88)||(13436816-13436858)
chr4 (45-143)||(24478994-24479092)
chr4 (41-143)||(48834710-48834811)
chr4 (20-143)||(6032653-6032773)
chr4 (74-123)||(15839965-15840014)
chr4 (20-76)||(13552092-13552148)
chr4 (52-144)||(26237431-26237523)
[»] chr2 (75 HSPs)
chr2 (20-148)||(10026621-10026749)
chr2 (20-144)||(38962736-38962860)
chr2 (20-143)||(25540414-25540537)
chr2 (20-134)||(42770670-42770784)
chr2 (20-144)||(38005375-38005499)
chr2 (20-131)||(8410104-8410215)
chr2 (20-143)||(10823033-10823156)
chr2 (20-134)||(331474-331588)
chr2 (26-143)||(44139463-44139580)
chr2 (20-148)||(10046482-10046609)
chr2 (52-143)||(34722685-34722776)
chr2 (49-148)||(41031911-41032010)
chr2 (16-134)||(6358170-6358288)
chr2 (37-134)||(45263686-45263783)
chr2 (23-130)||(3848937-3849044)
chr2 (46-137)||(7787055-7787146)
chr2 (20-143)||(18902540-18902663)
chr2 (20-103)||(41220608-41220691)
chr2 (20-134)||(3643906-3644020)
chr2 (20-130)||(19976830-19976940)
chr2 (20-134)||(22593108-22593221)
chr2 (16-130)||(37560142-37560256)
chr2 (46-143)||(12455309-12455406)
chr2 (20-144)||(35946712-35946835)
chr2 (20-143)||(7747247-7747370)
chr2 (48-143)||(10669593-10669688)
chr2 (20-143)||(11069851-11069974)
chr2 (20-103)||(21286417-21286500)
chr2 (20-143)||(34346297-34346420)
chr2 (16-143)||(39806895-39807022)
chr2 (20-143)||(44945567-44945689)
chr2 (20-134)||(2550841-2550955)
chr2 (46-143)||(3811701-3811798)
chr2 (20-100)||(20612588-20612669)
chr2 (46-143)||(28616389-28616486)
chr2 (22-134)||(9360767-9360879)
chr2 (20-103)||(15234111-15234194)
chr2 (16-134)||(18649045-18649163)
chr2 (46-152)||(39201509-39201615)
chr2 (26-143)||(13026421-13026538)
chr2 (26-143)||(14169619-14169736)
chr2 (20-121)||(21180346-21180447)
chr2 (58-143)||(27725951-27726036)
chr2 (26-126)||(16034916-16035016)
chr2 (26-100)||(34356185-34356259)
chr2 (20-81)||(13513978-13514039)
chr2 (54-143)||(16325602-16325691)
chr2 (53-134)||(24179575-24179655)
chr2 (57-134)||(26805306-26805383)
chr2 (45-134)||(29653625-29653713)
chr2 (49-101)||(2528393-2528445)
chr2 (29-103)||(2149244-2149319)
chr2 (20-143)||(12864197-12864320)
chr2 (29-137)||(14853381-14853491)
chr2 (28-103)||(37804941-37805016)
chr2 (20-142)||(29422188-29422310)
chr2 (26-103)||(15079462-15079539)
chr2 (26-103)||(25604574-25604650)
chr2 (46-137)||(25549727-25549818)
chr2 (66-129)||(28525479-28525542)
chr2 (20-103)||(41187682-41187765)
chr2 (46-100)||(43303345-43303399)
chr2 (36-129)||(5035277-5035370)
chr2 (70-103)||(13104875-13104908)
chr2 (46-103)||(33005751-33005807)
chr2 (20-121)||(41187822-41187923)
chr2 (46-137)||(31740777-31740868)
chr2 (46-137)||(33634455-33634546)
chr2 (69-143)||(20116622-20116696)
chr2 (36-129)||(10106577-10106670)
chr2 (67-132)||(16813186-16813251)
chr2 (67-132)||(16852465-16852530)
chr2 (67-148)||(29421302-29421383)
chr2 (66-123)||(30721885-30721942)
chr2 (46-103)||(40968965-40969022)
[»] scaffold0376 (1 HSPs)
scaffold0376 (16-143)||(12642-12769)
[»] chr7 (62 HSPs)
chr7 (20-143)||(1605917-1606040)
chr7 (20-133)||(34659202-34659315)
chr7 (26-143)||(38578877-38578994)
chr7 (20-143)||(22993377-22993500)
chr7 (26-143)||(17748392-17748509)
chr7 (20-143)||(22973943-22974066)
chr7 (20-143)||(48804659-48804782)
chr7 (20-143)||(13095834-13095957)
chr7 (16-143)||(18785641-18785768)
chr7 (20-137)||(1797436-1797553)
chr7 (20-137)||(43861988-43862105)
chr7 (20-103)||(10047926-10048009)
chr7 (20-103)||(47341852-47341935)
chr7 (20-134)||(16802099-16802213)
chr7 (30-143)||(5069825-5069938)
chr7 (20-124)||(21190809-21190913)
chr7 (20-148)||(43346784-43346912)
chr7 (46-130)||(49142692-49142776)
chr7 (20-143)||(27028255-27028378)
chr7 (20-103)||(43925488-43925571)
chr7 (46-148)||(36619259-36619361)
chr7 (46-143)||(3353427-3353523)
chr7 (54-143)||(23658189-23658278)
chr7 (46-134)||(26423306-26423394)
chr7 (36-143)||(28396170-28396277)
chr7 (20-143)||(42210272-42210395)
chr7 (46-144)||(14535293-14535391)
chr7 (68-133)||(41945497-41945562)
chr7 (46-134)||(27875107-27875195)
chr7 (46-130)||(30827294-30827378)
chr7 (20-143)||(21530724-21530847)
chr7 (47-134)||(39474943-39475030)
chr7 (20-143)||(45447946-45448069)
chr7 (20-134)||(14650293-14650407)
chr7 (20-137)||(5039434-5039551)
chr7 (66-143)||(8734696-8734773)
chr7 (46-143)||(10317756-10317852)
chr7 (29-143)||(24969336-24969448)
chr7 (16-103)||(42032068-42032155)
chr7 (20-143)||(45960013-45960135)
chr7 (28-134)||(4195221-4195327)
chr7 (16-126)||(20247197-20247306)
chr7 (20-94)||(22268088-22268162)
chr7 (46-103)||(365142-365199)
chr7 (20-116)||(37514897-37514993)
chr7 (55-143)||(45697200-45697287)
chr7 (46-134)||(3603355-3603447)
chr7 (65-144)||(28744183-28744262)
chr7 (46-101)||(29151942-29151997)
chr7 (54-121)||(32823253-32823320)
chr7 (68-130)||(39420861-39420923)
chr7 (65-143)||(48551878-48551956)
chr7 (20-137)||(4706000-4706117)
chr7 (69-130)||(19914726-19914787)
chr7 (54-103)||(46414685-46414734)
chr7 (20-126)||(4228781-4228884)
chr7 (40-120)||(25197150-25197230)
chr7 (91-143)||(32768984-32769036)
chr7 (46-133)||(4973130-4973217)
chr7 (46-137)||(48244372-48244463)
chr7 (20-76)||(9685715-9685771)
chr7 (78-134)||(38988934-38988990)
[»] chr8 (53 HSPs)
chr8 (34-143)||(43032892-43033001)
chr8 (20-134)||(18373987-18374101)
chr8 (20-133)||(17981418-17981531)
chr8 (20-134)||(14666090-14666204)
chr8 (46-138)||(33401814-33401906)
chr8 (20-143)||(2964053-2964176)
chr8 (20-143)||(15884566-15884688)
chr8 (20-114)||(13358999-13359093)
chr8 (45-143)||(583816-583912)
chr8 (20-134)||(6100449-6100563)
chr8 (26-103)||(1013027-1013104)
chr8 (26-143)||(8141085-8141202)
chr8 (20-143)||(9860005-9860129)
chr8 (20-144)||(24837219-24837343)
chr8 (23-143)||(45521149-45521268)
chr8 (20-143)||(3418523-3418646)
chr8 (20-103)||(38922464-38922547)
chr8 (29-143)||(10927592-10927706)
chr8 (16-134)||(14846549-14846666)
chr8 (20-125)||(2467146-2467251)
chr8 (46-143)||(4479306-4479402)
chr8 (46-139)||(6042824-6042917)
chr8 (20-93)||(6940535-6940608)
chr8 (20-124)||(13085501-13085605)
chr8 (26-134)||(16893920-16894027)
chr8 (30-130)||(26570911-26571011)
chr8 (20-103)||(34846791-34846873)
chr8 (26-124)||(44031464-44031567)
chr8 (20-143)||(44893288-44893411)
chr8 (46-127)||(33935761-33935842)
chr8 (26-134)||(34710586-34710694)
chr8 (53-134)||(16291222-16291303)
chr8 (46-143)||(43027308-43027405)
chr8 (59-103)||(8586989-8587033)
chr8 (20-103)||(11785893-11785975)
chr8 (52-139)||(27975900-27975987)
chr8 (52-139)||(28033169-28033256)
chr8 (20-94)||(22810057-22810130)
chr8 (53-143)||(23895578-23895668)
chr8 (20-102)||(29933750-29933831)
chr8 (62-143)||(13357966-13358047)
chr8 (71-128)||(18091428-18091485)
chr8 (46-143)||(36662408-36662504)
chr8 (51-143)||(68108-68200)
chr8 (65-137)||(7673673-7673745)
chr8 (71-143)||(24938572-24938644)
chr8 (36-100)||(34613831-34613895)
chr8 (53-137)||(35496271-35496355)
chr8 (55-138)||(22958782-22958865)
chr8 (46-103)||(3567907-3567964)
chr8 (79-143)||(10698937-10699001)
chr8 (63-134)||(22212534-22212606)
chr8 (20-88)||(22276545-22276613)
[»] chr5 (73 HSPs)
chr5 (20-148)||(7866555-7866683)
chr5 (20-143)||(9812846-9812969)
chr5 (20-143)||(12766105-12766228)
chr5 (46-143)||(9805004-9805101)
chr5 (17-133)||(12081879-12081995)
chr5 (20-143)||(12704988-12705111)
chr5 (20-143)||(42086301-42086424)
chr5 (46-148)||(38897724-38897825)
chr5 (16-148)||(4016260-4016392)
chr5 (20-143)||(20525812-20525935)
chr5 (40-143)||(42291515-42291618)
chr5 (20-137)||(3653930-3654045)
chr5 (20-134)||(14974343-14974457)
chr5 (20-134)||(19572698-19572812)
chr5 (46-144)||(23383657-23383755)
chr5 (20-143)||(1538405-1538528)
chr5 (20-95)||(1898975-1899050)
chr5 (20-143)||(7308374-7308497)
chr5 (20-143)||(8513493-8513616)
chr5 (20-119)||(25417217-25417316)
chr5 (46-141)||(30995121-30995216)
chr5 (20-102)||(5731971-5732053)
chr5 (46-136)||(21149734-21149824)
chr5 (46-143)||(37263241-37263337)
chr5 (20-108)||(35403557-35403645)
chr5 (46-130)||(38369700-38369783)
chr5 (46-137)||(18262634-18262725)
chr5 (20-103)||(28857102-28857185)
chr5 (20-130)||(39728361-39728471)
chr5 (20-101)||(18136332-18136413)
chr5 (29-133)||(14588637-14588741)
chr5 (20-103)||(13664234-13664317)
chr5 (64-143)||(39099789-39099868)
chr5 (20-134)||(5079305-5079419)
chr5 (64-134)||(20682636-20682706)
chr5 (16-130)||(35813021-35813135)
chr5 (55-137)||(40117424-40117506)
chr5 (46-143)||(20228717-20228814)
chr5 (53-129)||(24463910-24463986)
chr5 (20-103)||(26077115-26077198)
chr5 (20-102)||(11845852-11845934)
chr5 (20-130)||(23247374-23247484)
chr5 (46-120)||(41800977-41801051)
chr5 (20-133)||(20255343-20255456)
chr5 (63-132)||(43399145-43399214)
chr5 (20-100)||(14152024-14152104)
chr5 (46-94)||(40060296-40060344)
chr5 (20-144)||(41163469-41163592)
chr5 (20-143)||(2485171-2485293)
chr5 (45-143)||(14728081-14728180)
chr5 (20-143)||(15034049-15034172)
chr5 (20-103)||(28862799-28862882)
chr5 (20-130)||(24875319-24875429)
chr5 (26-100)||(30349559-30349633)
chr5 (20-134)||(42861237-42861351)
chr5 (69-134)||(9168272-9168337)
chr5 (44-129)||(19839325-19839410)
chr5 (45-142)||(22295215-22295312)
chr5 (67-143)||(18294494-18294570)
chr5 (20-94)||(16755035-16755109)
chr5 (79-152)||(6764458-6764531)
chr5 (26-143)||(20692913-20693030)
chr5 (54-129)||(21487625-21487697)
chr5 (46-103)||(35006785-35006842)
chr5 (53-120)||(1826864-1826932)
chr5 (67-103)||(20590020-20590056)
chr5 (68-148)||(21375373-21375453)
chr5 (55-103)||(25467419-25467467)
chr5 (70-136)||(7336644-7336710)
chr5 (56-94)||(20516460-20516498)
chr5 (36-101)||(18045629-18045694)
chr5 (46-103)||(20705563-20705620)
chr5 (46-103)||(38297014-38297071)
[»] chr6 (40 HSPs)
chr6 (20-143)||(5253233-5253356)
chr6 (25-144)||(3587954-3588073)
chr6 (20-143)||(6606107-6606230)
chr6 (20-143)||(8611984-8612107)
chr6 (20-143)||(21898625-21898748)
chr6 (46-143)||(3601087-3601184)
chr6 (20-133)||(12606407-12606520)
chr6 (20-143)||(30788863-30788984)
chr6 (20-134)||(10311488-10311602)
chr6 (20-148)||(2271308-2271434)
chr6 (26-143)||(8932644-8932761)
chr6 (26-143)||(8944110-8944227)
chr6 (16-143)||(12635787-12635914)
chr6 (20-143)||(19089475-19089598)
chr6 (70-143)||(9633635-9633708)
chr6 (47-148)||(29444770-29444871)
chr6 (20-103)||(13036054-13036137)
chr6 (20-142)||(9179747-9179869)
chr6 (16-134)||(11142576-11142694)
chr6 (20-134)||(13468910-13469024)
chr6 (51-144)||(5029825-5029918)
chr6 (20-124)||(14107387-14107491)
chr6 (20-143)||(34954629-34954752)
chr6 (20-132)||(9366445-9366556)
chr6 (45-103)||(33859369-33859427)
chr6 (15-103)||(9147273-9147361)
chr6 (20-132)||(29333160-29333271)
chr6 (20-103)||(24671916-24671999)
chr6 (71-137)||(8888910-8888976)
chr6 (46-124)||(13391290-13391367)
chr6 (53-132)||(13627257-13627336)
chr6 (20-134)||(15643853-15643961)
chr6 (69-130)||(17114920-17114981)
chr6 (54-103)||(30410456-30410505)
chr6 (59-103)||(31129193-31129237)
chr6 (68-143)||(32157177-32157252)
chr6 (46-120)||(19230592-19230665)
chr6 (30-87)||(2105156-2105213)
chr6 (45-101)||(10312745-10312801)
chr6 (46-130)||(33940014-33940098)
[»] chr1 (80 HSPs)
chr1 (30-137)||(33498856-33498963)
chr1 (21-143)||(43959832-43959954)
chr1 (26-134)||(37339799-37339908)
chr1 (20-144)||(17642014-17642138)
chr1 (20-142)||(9853289-9853411)
chr1 (20-134)||(11397909-11398022)
chr1 (20-137)||(10336490-10336607)
chr1 (20-136)||(18649370-18649486)
chr1 (26-134)||(18915847-18915955)
chr1 (20-143)||(5855496-5855619)
chr1 (20-143)||(8763965-8764088)
chr1 (22-143)||(14254279-14254400)
chr1 (20-148)||(16956440-16956568)
chr1 (20-132)||(33418137-33418249)
chr1 (20-96)||(34334353-34334429)
chr1 (20-143)||(2567250-2567373)
chr1 (16-143)||(17092488-17092615)
chr1 (20-143)||(41663867-41663990)
chr1 (20-143)||(50371845-50371968)
chr1 (20-143)||(50503372-50503495)
chr1 (16-142)||(12036756-12036882)
chr1 (20-120)||(2980965-2981065)
chr1 (46-134)||(15238126-15238214)
chr1 (20-144)||(34719750-34719874)
chr1 (20-120)||(49078088-49078188)
chr1 (20-143)||(30927738-30927861)
chr1 (20-103)||(31576598-31576681)
chr1 (20-143)||(32142857-32142979)
chr1 (20-103)||(45361933-45362016)
chr1 (21-143)||(15465940-15466062)
chr1 (20-126)||(33004043-33004149)
chr1 (26-143)||(42710149-42710266)
chr1 (20-132)||(10422762-10422874)
chr1 (20-148)||(40288483-40288611)
chr1 (20-103)||(6563415-6563498)
chr1 (20-143)||(26325786-26325909)
chr1 (20-133)||(31152690-31152803)
chr1 (46-130)||(34697335-34697419)
chr1 (20-103)||(17358522-17358605)
chr1 (51-134)||(21849225-21849307)
chr1 (20-103)||(48798121-48798204)
chr1 (20-134)||(9659199-9659312)
chr1 (21-143)||(10172982-10173104)
chr1 (29-103)||(16263528-16263602)
chr1 (45-143)||(44969664-44969761)
chr1 (51-144)||(41696608-41696701)
chr1 (26-103)||(45536688-45536765)
chr1 (16-132)||(5063866-5063981)
chr1 (26-126)||(13262063-13262163)
chr1 (26-101)||(34877970-34878045)
chr1 (46-137)||(45726450-45726541)
chr1 (20-94)||(8905211-8905284)
chr1 (26-132)||(48761156-48761262)
chr1 (78-143)||(4581693-4581758)
chr1 (55-143)||(12744534-12744622)
chr1 (55-143)||(12755524-12755612)
chr1 (26-102)||(31734269-31734344)
chr1 (20-103)||(32845-32928)
chr1 (51-130)||(38859140-38859219)
chr1 (20-142)||(892314-892431)
chr1 (53-143)||(5504038-5504128)
chr1 (26-116)||(14357735-14357825)
chr1 (20-134)||(26258670-26258783)
chr1 (20-94)||(51437443-51437517)
chr1 (68-137)||(5143171-5143239)
chr1 (46-143)||(26660138-26660234)
chr1 (46-103)||(28324631-28324688)
chr1 (46-126)||(35908757-35908838)
chr1 (26-103)||(47312950-47313026)
chr1 (53-97)||(18808272-18808316)
chr1 (46-134)||(25165401-25165488)
chr1 (85-143)||(6899597-6899655)
chr1 (46-120)||(17988694-17988767)
chr1 (65-143)||(38791621-38791699)
chr1 (69-103)||(42744801-42744835)
chr1 (22-103)||(13265914-13265995)
chr1 (53-130)||(32150946-32151023)
chr1 (46-130)||(18708564-18708648)
chr1 (71-103)||(19195391-19195423)
chr1 (67-143)||(50094925-50095001)
[»] chr3 (82 HSPs)
chr3 (26-148)||(30767253-30767375)
chr3 (26-143)||(49198330-49198447)
chr3 (26-134)||(7328823-7328930)
chr3 (20-143)||(35315929-35316052)
chr3 (20-143)||(51060292-51060415)
chr3 (20-137)||(13893899-13894016)
chr3 (46-142)||(8164552-8164648)
chr3 (20-132)||(41630534-41630646)
chr3 (20-143)||(15320159-15320282)
chr3 (16-102)||(11687161-11687247)
chr3 (46-148)||(30045820-30045922)
chr3 (46-143)||(28572222-28572319)
chr3 (20-137)||(35923640-35923757)
chr3 (20-120)||(6462385-6462485)
chr3 (47-143)||(26043812-26043908)
chr3 (26-134)||(29135892-29136000)
chr3 (20-144)||(49543492-49543616)
chr3 (20-148)||(51682960-51683088)
chr3 (20-143)||(47219117-47219240)
chr3 (20-143)||(48341993-48342116)
chr3 (52-143)||(50405614-50405705)
chr3 (20-143)||(53649700-53649823)
chr3 (20-134)||(10040530-10040643)
chr3 (20-122)||(10855357-10855459)
chr3 (20-134)||(25294933-25295047)
chr3 (20-126)||(42412802-42412908)
chr3 (26-132)||(47749127-47749232)
chr3 (46-143)||(3507544-3507641)
chr3 (26-143)||(29127898-29128015)
chr3 (16-141)||(40944852-40944976)
chr3 (20-129)||(49082797-49082906)
chr3 (16-132)||(3136716-3136831)
chr3 (46-134)||(7650226-7650314)
chr3 (20-120)||(26207835-26207935)
chr3 (20-143)||(29762166-29762289)
chr3 (20-143)||(54261199-54261322)
chr3 (20-133)||(928573-928686)
chr3 (20-132)||(31072851-31072963)
chr3 (20-126)||(15795522-15795627)
chr3 (26-120)||(45877433-45877527)
chr3 (20-141)||(3763024-3763144)
chr3 (46-143)||(7310714-7310811)
chr3 (26-131)||(47303512-47303617)
chr3 (20-132)||(32873571-32873682)
chr3 (71-143)||(43330743-43330815)
chr3 (63-130)||(7648756-7648823)
chr3 (20-103)||(52364851-52364934)
chr3 (20-130)||(33251635-33251745)
chr3 (52-101)||(26590319-26590368)
chr3 (46-143)||(47471831-47471927)
chr3 (20-132)||(3755543-3755655)
chr3 (53-129)||(4638160-4638236)
chr3 (46-130)||(23511566-23511650)
chr3 (46-93)||(7612987-7613034)
chr3 (54-137)||(41219599-41219682)
chr3 (16-103)||(54237417-54237504)
chr3 (68-143)||(55069690-55069765)
chr3 (53-143)||(26361978-26362068)
chr3 (51-125)||(39849076-39849149)
chr3 (16-134)||(40660347-40660465)
chr3 (16-144)||(45402361-45402486)
chr3 (46-143)||(8362576-8362673)
chr3 (50-143)||(24506659-24506751)
chr3 (20-121)||(28242251-28242352)
chr3 (26-143)||(35998582-35998698)
chr3 (55-143)||(19146969-19147057)
chr3 (46-100)||(46529924-46529978)
chr3 (35-148)||(22909772-22909884)
chr3 (20-81)||(30735018-30735079)
chr3 (63-143)||(34374453-34374533)
chr3 (87-143)||(44064584-44064640)
chr3 (16-92)||(50682446-50682522)
chr3 (71-134)||(2668085-2668148)
chr3 (28-103)||(33688932-33689007)
chr3 (20-103)||(45450498-45450579)
chr3 (46-100)||(13167497-13167551)
chr3 (26-140)||(38394189-38394301)
chr3 (20-97)||(5549270-5549346)
chr3 (36-133)||(22405564-22405661)
chr3 (69-101)||(19873388-19873420)
chr3 (51-103)||(41223089-41223140)
chr3 (83-143)||(49021214-49021274)
[»] scaffold0006 (1 HSPs)
scaffold0006 (20-134)||(68493-68604)
[»] scaffold0291 (1 HSPs)
scaffold0291 (46-143)||(6857-6954)
[»] scaffold0010 (2 HSPs)
scaffold0010 (55-134)||(155730-155809)
scaffold0010 (53-143)||(25794-25884)
[»] scaffold0016 (1 HSPs)
scaffold0016 (46-144)||(8710-8808)
[»] scaffold0005 (4 HSPs)
scaffold0005 (20-124)||(271103-271207)
scaffold0005 (46-121)||(249337-249412)
scaffold0005 (79-137)||(219404-219462)
scaffold0005 (79-134)||(250044-250099)
[»] scaffold0209 (1 HSPs)
scaffold0209 (45-143)||(12576-12672)
[»] scaffold0004 (2 HSPs)
scaffold0004 (27-143)||(7845-7961)
scaffold0004 (71-134)||(94999-95063)
[»] scaffold0029 (1 HSPs)
scaffold0029 (46-133)||(41046-41133)
[»] scaffold0002 (4 HSPs)
scaffold0002 (20-134)||(319398-319512)
scaffold0002 (20-143)||(546-669)
scaffold0002 (20-88)||(412091-412159)
scaffold0002 (46-100)||(139437-139491)
[»] scaffold0341 (1 HSPs)
scaffold0341 (20-103)||(18608-18691)
[»] scaffold0086 (1 HSPs)
scaffold0086 (46-125)||(26185-26264)
[»] scaffold0079 (1 HSPs)
scaffold0079 (20-101)||(8151-8231)
[»] scaffold0009 (2 HSPs)
scaffold0009 (46-143)||(42842-42939)
scaffold0009 (46-87)||(9438-9479)
[»] scaffold0316 (1 HSPs)
scaffold0316 (46-134)||(1633-1721)
[»] scaffold0024 (1 HSPs)
scaffold0024 (55-143)||(149396-149484)
[»] scaffold0223 (1 HSPs)
scaffold0223 (52-134)||(16887-16969)
[»] scaffold0013 (1 HSPs)
scaffold0013 (48-143)||(51735-51826)
[»] scaffold0050 (1 HSPs)
scaffold0050 (20-98)||(72609-72686)
[»] scaffold0384 (1 HSPs)
scaffold0384 (46-143)||(5975-6071)
[»] scaffold0011 (2 HSPs)
scaffold0011 (30-143)||(224303-224416)
scaffold0011 (30-120)||(186504-186593)
[»] scaffold0116 (1 HSPs)
scaffold0116 (55-143)||(17401-17489)
[»] scaffold0041 (1 HSPs)
scaffold0041 (67-143)||(25108-25184)
[»] scaffold0001 (1 HSPs)
scaffold0001 (67-103)||(65202-65238)
[»] scaffold0635 (1 HSPs)
scaffold0635 (36-129)||(2114-2207)


Alignment Details
Target: scaffold0170 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 272
Target Start/End: Original strand, 9821 - 10069
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||||||||| |   |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  9821 agctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 9920  T
Q  120 gcccacctttggtggatcagaaactagtgaaaagccnnnnnnnnnnnnnnnnttggcatttttaataaatcataaatatattaaaatatccacacatttt 219  Q
    | ||||||||||||| |||||||| |||||||||||                |||||||||||||||||||||||||||||||||||||||||||| |||    
T  9921 gtccacctttggtgggtcagaaaccagtgaaaagccaaaaaaataaaa----ttggcatttttaataaatcataaatatattaaaatatccacacaattt 10016  T
Q  220 tcaagaattatggagaaaactccacaccttgggagaggtaataaactcaagag 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10017 tcaagaattatggagaaaactccacaccttgggagaggtaataaactcaagag 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 290 - 413
Target Start/End: Original strand, 10100 - 10223
Alignment:
Q  290 gtggaacattggaagtaaacttgtgttctttatcatgcttaattcgtagcatcaatcaacttgctctacaagccaagatgatggtgtaaacccttgaagt 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10100 gtggaacattggaagtaaacttgtgttctttatcatgcttaattcgtagcatcaatcaacttgctctacaagccaagatgatggtgtaaacccttgaagt 10199  T
Q  390 aacggaaaatccaagacaacatag 413  Q
    ||||||||||||||||||||||||    
T  10200 aacggaaaatccaagacaacatag 10223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 6e-38; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 36262902 - 36262777
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||| ||| |||||||    
T  36262902 aagaagctccttccaaggacgtacccggagaataccgggttcgattcccaggg--aacaacgcttggccagtgcacatgcctctacgcacgagtcggatt 36262805  T
Q  116 agtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||||| ||||||||    
T  36262804 agtcgcccacctttggtgggtcagaaac 36262777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 5472981 - 5472867
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    |||||||| |||||| ||||||||  |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  5472981 agctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 5472882  T
Q  120 gcccacctttggtgg 134  Q
    |||||||||||||||    
T  5472881 gcccacctttggtgg 5472867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 38166005 - 38166128
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||  ||||||||||    
T  38166005 agctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtc 38166104  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| || |||||    
T  38166105 gcccacctttggtgggtcggaaac 38166128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 47078436 - 47078564
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||    
T  47078436 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtc 47078535  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
    || |||| ||||||| || ||||| ||||    
T  47078536 gctcaccattggtgggtcggaaaccagtg 47078564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 29895765 - 29895888
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  29895765 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 29895864  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  29895865 gtccaccattggtggttcggaaac 29895888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 3159596 - 3159479
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||||||| |||  | |||||||||| |||    
T  3159596 ttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcac 3159497  T
Q  126 ctttggtggatcagaaac 143  Q
    | ||||||| || |||||    
T  3159496 cattggtgggtcggaaac 3159479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 40780984 - 40780871
Alignment:
Q  30 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    ||||| |||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||  ||||||||||| ||||||||    
T  40780984 aaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 40780885  T
Q  130 ggtggatcagaaac 143  Q
    ||||| || |||||    
T  40780884 ggtgggtcggaaac 40780871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 1940907 - 1940796
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||   |||||||||||||||||| |||  ||||||||||    
T  1940907 agctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtc 1940811  T
Q  120 gcccacctttggtgg 134  Q
    |||||||||||||||    
T  1940810 gcccacctttggtgg 1940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 3507245 - 3507376
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| || |||| ||||||||||| |||| |||||||||||| || ||| ||||||||||||| ||||||| ||||||||| | |||  ||||||    
T  3507245 aagaagctcctttcaagaatgtatccggagaatatcgggttcgattcccaaggg-aacaacgcttggctagtgcgcgtgcctctacacacgagccggatt 3507343  T
Q  116 agtcgcccacctttggtggatcagaaactagtg 148  Q
    ||||| |||||||||||||||| ||||||||||    
T  3507344 agtcgtccacctttggtggatcggaaactagtg 3507376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 1446804 - 1446910
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  1446804 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 1446903  T
Q  120 gcccacc 126  Q
    | |||||    
T  1446904 gtccacc 1446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 7246773 - 7246656
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||| ||||  ||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||    
T  7246773 ttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 7246674  T
Q  126 ctttggtggatcagaaac 143  Q
    ||||||||| || |||||    
T  7246673 ctttggtgggtcggaaac 7246656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 20128293 - 20128410
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||    ||||||||| ||||    
T  20128293 ttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccac 20128392  T
Q  126 ctttggtggatcagaaac 143  Q
    | ||||||| ||||||||    
T  20128393 cattggtgggtcagaaac 20128410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 20532541 - 20532420
Alignment:
Q  21 gctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    |||||||||||||   || ||||| ||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||  ||  ||||| |||||    
T  20532541 gctcattccaaggccatacccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcg 20532442  T
Q  121 cccacctttggtggatcagaaa 142  Q
    ||||||||||||||||| ||||    
T  20532441 cccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 38075417 - 38075494
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38075417 ttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgc 38075494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 49260792 - 49260684
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||||||||||||  ||||| |  ||| |||| || ||||||||||||||||||||||||||||||||||||| |||  ||||||||||| ||||    
T  49260792 ttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccac 49260693  T
Q  126 ctttggtgg 134  Q
    |||||||||    
T  49260692 ctttggtgg 49260684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 41339528 - 41339417
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||| |||||||||||||| || || |||||||||||||||||||||| | |||||||||||| |||  ||||||||||    
T  41339528 agctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtgtgtatgcctctacgcacgagacggattagtc 41339429  T
Q  120 gcccacctttgg 131  Q
    ||||||| ||||    
T  41339428 gcccaccattgg 41339417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 42722710 - 42722596
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| |||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  42722710 agctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 42722611  T
Q  120 gcccacctttggtgg 134  Q
    |  ||||||| ||||    
T  42722610 gttcacctttagtgg 42722596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 27248406 - 27248528
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  |||||||||||||| || |||| |||||||||||||||||  ||||||||||||||||  ||  | ||||||||    
T  27248406 agctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gcgcatgcctctacgcaggagccagattagtc 27248503  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    ||||||||||||| | |||||||||    
T  27248504 gcccacctttggtaggtcagaaact 27248528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 6779195 - 6779302
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||| | ||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| ||  ||  ||||||||||| ||||    
T  6779195 ttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtcgtccac 6779294  T
Q  126 ctttggtg 133  Q
    ||||||||    
T  6779295 ctttggtg 6779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 8889000 - 8889123
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||| ||||| ||||||||  |||||||||||||||||  |||||||||||| ||||| ||||||||||| ||||||||  ||  ||||||||||    
T  8889000 agctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtc 8889099  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||||||| || |||||    
T  8889100 gtccacctttggtgggtcggaaac 8889123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 36145348 - 36145225
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||| |||||| |||||||||||  |||||||||||||||||| |  ||  ||||||||||    
T  36145348 agctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtc 36145249  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||| || ||| |||||    
T  36145248 gtccacctttgatgaatcggaaac 36145225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 52950060 - 52950183
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||  |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||| |  ||| | ||||||||    
T  52950060 agctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtc 52950159  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||||||| || |||||    
T  52950160 gtccacctttggtgggtcggaaac 52950183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 53599038 - 53599161
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||  ||  ||||||| ||    
T  53599038 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatc 53599137  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |  ||||||| ||||||| |||||    
T  53599138 gttcacctttagtggatcggaaac 53599161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 30317244 - 30317334
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||| |||||||||||||||||||| || |||||||||||| |||  || |||||||||||||||||||||| || |||||    
T  30317244 ggttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaac 30317334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 43458587 - 43458701
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||||||||||||| ||||  ||  ||||| || |||||||| |||| |||| |||||||||||||||||||||||||||||  |||  ||||||    
T  43458587 aagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacggacgagccggatt 43458686  T
Q  116 agtcgcccacctttg 130  Q
    ||||| |||||||||    
T  43458687 agtcgtccacctttg 43458701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 15732575 - 15732458
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||||||||| |||||||||||||||||  | |||||||||| |||||||||||| ||||||||||||| ||     |||||||||| ||     
T  15732575 ttccaaggacgtatccggagaataccgggttcgattcatatggggaacaacacttggccagtgcacatgcctctacgcacgggctagattagtcgctcat 15732476  T
Q  126 ctttggtggatcagaaac 143  Q
    |||||||||||| |||||    
T  15732475 ctttggtggatcggaaac 15732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 48015180 - 48015083
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| |||  ||||||||| |||||  |||| |||||| |||||    
T  48015180 aataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagtagcccaattttgatggatcggaaac 48015083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 21429278 - 21429402
Alignment:
Q  19 aagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagt 118  Q
    |||||| |||||| || |||||||   |||| ||||||||||| | ||||||||||||| || |||||||||||||||||||||| ||| || || ||||    
T  21429278 aagctccttccaaagacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagt 21429377  T
Q  119 cgcccacctttggtggatcagaaac 143  Q
    || ||||||||||||| || |||||    
T  21429378 cgtccacctttggtgggtcggaaac 21429402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 3574553 - 3574466
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 133  Q
    ||||||| |||| |||| ||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||    
T  3574553 aataccgagttcaattcccagggagaacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtcgctcaccttaggtg 3574466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 24166428 - 24166551
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||  |||  ||||| ||||||||||| || ||| ||||||| ||||||||||||||||||||||||| |||  | ||||||||    
T  24166428 agctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctctacgcacgagccagattagtc 24166527  T
Q  120 gcccacctttggtggatcagaaac 143  Q
     |||||||||| |||||| |||||    
T  24166528 acccacctttgatggatcggaaac 24166551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 40272464 - 40272381
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| |||||| |||||||||||  |||| |||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  40272464 agctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgc 40272381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 55921012 - 55921135
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| | | ||||  ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||   ||  ||||||| ||    
T  55921012 agctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatc 55921111  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||||||| || |||||    
T  55921112 gctcacctttggtgggtcggaaac 55921135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 29588714 - 29588812
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagt 118  Q
    |||||||||||| || ||  |||| |||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||| |||  |||||||||    
T  29588714 agctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 48317408 - 48317302
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    |||||||||||| || |||| || ||||||| || ||||||| ||||| |||||||||||||| ||||| | |||||||||||| |||  ||||||||||    
T  48317408 agctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtc 48317309  T
Q  120 gcccacc 126  Q
    |||||||    
T  48317308 gcccacc 48317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 14858695 - 14858811
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||||||| ||||| ||||||||||||| ||| |||||||| ||| ||||| |||||||||||| |||||||  ||| || ||||| ||| ||||    
T  14858695 ttccaaggatgtacccggagaataccgggttcggttcccagggggatcaa-gcttgaccagtgcgcatgtctctacgtacgagtcagattattcgtccac 14858793  T
Q  126 ctttggtggatcagaaac 143  Q
    ||||| ||| ||||||||    
T  14858794 ctttgatgggtcagaaac 14858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 16645122 - 16645219
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||||| |||||  ||||||||||||||||||| |||||||||||| |  || || |||||||||||||||| |||||| || |||||    
T  16645122 aataccgggttcgattttcaggaagaacaacgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaac 16645219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 14124020 - 14124108
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||| |||||||||| |||||||||||||  ||||||||||||||||||||||| | |||  |||||||||||| |||| |||||||    
T  14124020 aataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgg 14124108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 16450310 - 16450390
Alignment:
Q  52 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 132  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||  ||  | ||||||||| |||||||||||    
T  16450310 gggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggt 16450390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 43468351 - 43468431
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc 126  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||  ||  |||||||||||||||||    
T  43468351 aataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccacc 43468431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 55005439 - 55005335
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || ||||| || ||||||||  |||||||| |||||| ||||||||||| ||| ||||||||||||||||| | | |||||||||||    
T  55005439 agctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtcggattagtc 55005340  T
Q  120 gccca 124  Q
    |||||    
T  55005339 gccca 55005335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 2559285 - 2559408
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||  |||||||| |||||||   ||| ||||||||||||||||||||||||||||||||||| | |  ||||||| ||    
T  2559285 agctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactc 2559384  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||||||| || |||||    
T  2559385 gtccacctttggtgggtcggaaac 2559408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 33647699 - 33647822
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| ||||| ||  ||||||||||||||||  ||||| |||||||||||| ||||||| ||| ||||||||| |||| | ||||||||    
T  33647699 agctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctctacgcacgaaccagattagtc 33647798  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |  || |||||||||||| |||||    
T  33647799 gttcatctttggtggatcggaaac 33647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 17080068 - 17080138
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    |||||||||||||||||||||||||||||||||||||  ||  |||||||||||| |||||||| ||||||    
T  17080068 ggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatc 17080138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 41163015 - 41162893
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||||||| |||||||| ||||||||  ||| ||||||||| |||||||||||  ||||| |||| ||  ||  || |||||||    
T  41163015 agctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttctatgcatgagccgaattagtc 41162916  T
Q  120 gcccacctttggtggatcagaaa 142  Q
    ||||||||||| |||||| ||||    
T  41162915 gcccacctttgatggatcggaaa 41162893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 295655 - 295552
Alignment:
Q  30 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    ||||| ||||||||  |||||| | |||||||| ||| || ||||||| ||||||||||||||||||||||||| |||| | ||||||||| ||||| ||    
T  295655 aaggacgtatccggggaataccagattcgattcccagagg-aacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccaccgtt 295557  T
Q  130 ggtgg 134  Q
    |||||    
T  295556 ggtgg 295552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 7741929 - 7742016
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 133  Q
    |||| ||||||| | ||||||||| ||||||||||||||||||| ||||||||||||| |||  | ||||||||| ||| ||||||||    
T  7741929 aatatcgggttccaatctcaggggtaacaacgcttggccagtgcacatgcctctacgcacgatccagattagtcgtccatctttggtg 7742016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 13073516 - 13073639
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||| ||||||| ||||||||| || ||||||||| | ||||||||||||||| |||||||||  ||| | ||||||||    
T  13073516 agctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgcgcatacctctacgcatgaaccagattagtc 13073615  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |   ||||||||||| || |||||    
T  13073616 gtttacctttggtgggtcggaaac 13073639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 14567963 - 14568038
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 121  Q
    |||||| |||||||||||||||| ||| |||||||| ||||||| ||| ||||||||| ||| |||||||||||||    
T  14567963 aataccaggttcgattctcagggagaataacgcttgaccagtgcacatacctctacgcacgagtcggattagtcgc 14568038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 24850759 - 24850677
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||| |||||||| ||||||| | ||| ||| ||||||| |||||| |||| |||||||||||||||||||||    
T  24850759 agctcattccaaggacgtatccgggaaataccagattcaattatcagggg-aacaacacttgaccagtgcgcatgcctctacgc 24850677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 10541020 - 10541116
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| |||||||||||  |||||| |||||||||||||||||| |||||||||||||| |||  | ||||| ||| ||||||||| |||||| |||||    
T  10541020 aatatcgggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgcacgagccagattaatcg-ccacctttgatggatcggaaac 10541116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 20354639 - 20354720
Alignment:
Q  44 aaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||| ||||  ||||| |||||||||||||| |||||||||||||||||||  || |||||||||||| ||||    
T  20354639 aaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccac 20354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 21192667 - 21192731
Alignment:
Q  69 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 133  Q
    ||||||||| | ||||||||||||||||||||||| ||| |||||||| |||||||| |||||||    
T  21192667 ggaacaacgttgggccagtgcgcatgcctctacgcacgagtcggattaatcgcccacatttggtg 21192731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 4736575 - 4736698
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||||||| |||   |||||||||||| |||||||| || ||||||| ||||||| || |||||||||||||  | |  || |||||||    
T  4736575 agctcctttcaaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtacaagccgaattagtc 4736674  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||| ||||||| || |||||    
T  4736675 gcccaccgttggtgggtcggaaac 4736698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 14077924 - 14078047
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||| || ||||||||| ||||||| | | ||  |||| |||| | |||| | ||||| ||||||||||| |||||||| ||| |||||||||||    
T  14077924 agctccttctaaagatgtatccagaaaatatcagatttaattcacaggagaaacatcacttggtcagtgcgcatgtctctacgcacgagtcggattagtc 14078023  T
Q  120 gcccacctttggtggatcagaaac 143  Q
     ||||| ||| |||||||||||||    
T  14078024 acccacatttagtggatcagaaac 14078047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 14597974 - 14597916
Alignment:
Q  79 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||||||||||||||||||||||| ||||  |||||||||| ||||||||| ||||||    
T  14597974 ttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatc 14597916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 15829686 - 15829800
Alignment:
Q  29 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 128  Q
    |||||| ||||||||| |||| |  ||| |||| ||||||| | |||| |||||||||||||||||| |||| ||  ||  ||||||||||  ||||| |    
T  15829686 caaggacgtatccggagaatatccagtttgattttcaggggaatcaacacttggccagtgcgcatgcttctaggcatgagccggattagtcctccaccat 15829785  T
Q  129 tggtggatcagaaac 143  Q
    |||||||||||||||    
T  15829786 tggtggatcagaaac 15829800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 20421784 - 20421834
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20421784 ggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgc 20421834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 35359749 - 35359819
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||||   | | |||||||||||||||    
T  35359749 ttcgattctcagggggaacaacgtttgaccagtgcgcatgcctcaacgcataagttggattagtcgcccac 35359819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 38168235 - 38168348
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||| ||||||||||  | | ||||||||||||||||||||| |||||||||||||  ||  ||||||||||    
T  38168235 agctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccggattagtc 38168333  T
Q  120 gcccacctttggtgg 134  Q
    |  ||||||| ||||    
T  38168334 gttcacctttagtgg 38168348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 47682476 - 47682392
Alignment:
Q  58 gattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||| || |||| ||||||||||| |||| |||||||| |||  ||| ||||||||||||||||||||| || |||||    
T  47682476 gattctcagggg-aataacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaac 47682392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 8064905 - 8064825
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc 126  Q
    ||||| ||||||||||| || |||||| ||| |||| |||||||||||||||||||||  ||  ||||||||||| |||||    
T  8064905 aatactgggttcgattcccaaggggaataacacttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 8064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 14567276 - 14567331
Alignment:
Q  79 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||||||||||||||||||| |||  |||||||||||| | ||||||||||    
T  14567276 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgg 14567331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 37369127 - 37369052
Alignment:
Q  68 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||| ||| |||||| |||||||||||||| ||| |||||| ||||||||||  |||||| ||| |||||    
T  37369127 gggaacaacgtttgtccagtgtgcatgcctctacgcacgagtcggataagtcgcccactattggtgaatcggaaac 37369052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 45721090 - 45721173
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    |||||||||||| ||| ||||||| || || | ||||||| ||||| ||||||||||| | | |||||||||||| ||||||||    
T  45721090 aataccgggttccattttcaggggaaataatgtttggccactgcgcgtgcctctacgcacaagtcggattagtcgtccaccttt 45721173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 4738629 - 4738719
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||  |||| |||||||||||| ||||||||||||| ||||||||  ||   | |||||||| ||||||||||||| || |||||    
T  4738629 ggttcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaac 4738719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 31588694 - 31588787
Alignment:
Q  52 gggttcgattctcagggggaacaacgct--tggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||| ||||| ||| || |||||||||  ||||||||||||||| ||||||||  ||  |||||||||||| ||| ||||||||||| |||||    
T  31588694 gggtttgattcccagaggaaacaacgctcttggccagtgcgcatgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaac 31588787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 42722511 - 42722406
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || ||| |||||| ||||  ||||||||||| ||||| |||||| |||||| |||| ||||||||||| |||||| ||  || |||||||||||    
T  42722511 agctcctttcaaagatgtacccggggaataccgggtttgattcccagggg-aacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtc 42722413  T
Q  120 gcccacc 126  Q
    | |||||    
T  42722412 gtccacc 42722406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 26480056 - 26479999
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||| |||||||||| | |||||| ||| |||||||||| |||||||||||||||    
T  26480056 aataccgagttcgattcttaaggggaataacacttggccagtacgcatgcctctacgc 26479999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 33109297 - 33109425
Alignment:
Q  17 agaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgct--tggccagtgcgcatgcctctacgctcgaatcggat 114  Q
    |||||||| ||||||||| ||||||||   ||| ||||||| |||| || |  ||||||||||  |||||||| |||||| |||||||| |||  |||||    
T  33109297 agaagctccttccaaggaggtatccgggggatatcgggttcaattcccatgaagaacaacgctcttggccagtacgcatgtctctacgcacgagccggat 33109396  T
Q  115 tagtcgcccacctttggtggatcagaaac 143  Q
    |||| ||||| |  || ||||||||||||    
T  33109397 tagttgcccatcaatgatggatcagaaac 33109425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 143
Target Start/End: Original strand, 50485971 - 50486044
Alignment:
Q  70 gaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||| ||||||||  ||||||||||||||| |||  ||||||||||||||||| || |||| || |||||    
T  50485971 gaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaac 50486044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 7000498 - 7000613
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||| |||  |||  ||||||| ||||||||| ||||  |||||||||||||||| ||    ||||||||||| |||  | ||||    
T  7000498 aagaagctccttccaaggacgtactcggggaataccgagttcgattcccaggaagaacaacgcttggccaatg----tgcctctacgcacgagccagatt 7000593  T
Q  116 agtcgcccacctttggtggat 136  Q
    |||||| || |||||||||||    
T  7000594 agtcgctca-ctttggtggat 7000613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 18531541 - 18531620
Alignment:
Q  64 cagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||| ||||| ||||||||||||||| | || |||| | ||||| ||| |||||||| |||| || |||||    
T  18531541 cagggggaacaacacttggtcagtgcgcatgcctccatgcacgaaccagattattcgtccaccttttgtgggtcggaaac 18531620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 9548723 - 9548813
Alignment:
Q  54 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 144  Q
    ||||||||||||  | |||||||||||||  ||||||||||||||| | | ||||   |||||||||  |||| |||||||||| ||||||    
T  9548723 gttcgattctcaatgagaacaacgcttggttagtgcgcatgcctctgcacacgaactagattagtcgttcaccgttggtggatcggaaact 9548813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 13436816 - 13436858
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtg 88  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||    
T  13436816 aataccgggttcgattcccagagggaacaacgcttggtcagtg 13436858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 24479092 - 24478994
Alignment:
Q  45 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||| |||| ||| | ||||| ||||||||||| ||| | | || |||||||| | |||  ||||||| ||||||||| |||||||||| |||||    
T  24479092 aaataccgagttcaatttttaggggaaacaacgcttgaccattacacacgcctctacacacgagccggattaatcgcccaccgttggtggatcggaaac 24478994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 48834811 - 48834710
Alignment:
Q  41 cggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcaga 140  Q
    |||| ||||||||||||||||  |||||| || ||  || ||||||||| ||||||||||  |  || |||||||||||||| ||||||||||| || ||    
T  48834811 cggagaataccgggttcgatttccagggg-aataatactaggccagtgcacatgcctctatacatgagtcggattagtcgcctacctttggtgggtcgga 48834713  T
Q  141 aac 143  Q
    |||    
T  48834712 aac 48834710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 6032773 - 6032653
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||||||||| ||| ||||| || ||   ||||| ||||||| ||||||||||||   ||  ||||||||||    
T  6032773 agctccttccaaggacgtacccggggaataccgggttcaattttcaggaggtac---gcttgaccagtgctcatgcctctacgaatgagccggattagtc 6032677  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | | ||||||||||| || |||||    
T  6032676 gtctacctttggtgggtcggaaac 6032653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 15840014 - 15839965
Alignment:
Q  74 aacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccc 123  Q
    |||| |||||||||||||||||||||||||  ||  ||||||||||||||    
T  15840014 aacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgccc 15839965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 13552092 - 13552148
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaac 76  Q
    ||||| ||||||| | ||||||||  |||| ||||||||||||||||| ||||||||    
T  13552092 agctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 13552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 26237523 - 26237431
Alignment:
Q  52 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 144  Q
    |||||||||||||||||| ||||||| |||  ||||||| ||| || |||||  || |||||||||| | ||||| ||| ||| || ||||||    
T  26237523 gggttcgattctcaggggaaacaacgtttgatcagtgcgtatgtctttacgcatgagtcggattagtagtccaccattgatgggtcggaaact 26237431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 6e-38; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 10026749 - 10026621
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||  ||||||||||    
T  10026749 agctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtc 10026650  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
    | ||||||||||||| || ||||||||||    
T  10026649 gaccacctttggtgggtcggaaactagtg 10026621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 38962736 - 38962860
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    |||||||| |||||| ||||||||  |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  38962736 agctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtc 38962835  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    | ||||||||||||| |||||||||    
T  38962836 gtccacctttggtgggtcagaaact 38962860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 25540537 - 25540414
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||||| ||  ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  25540537 agctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 25540438  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||||||| || |||||    
T  25540437 gtccacctttggtgggtcggaaac 25540414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 42770784 - 42770670
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||| ||    
T  42770784 agctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacgagccggattaatc 42770685  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||||||||    
T  42770684 gtccacctttggtgg 42770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 38005375 - 38005499
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |  ||  ||||||||||    
T  38005375 agctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtc 38005474  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    |||||||||||||||||| ||||||    
T  38005475 gcccacctttggtggatcggaaact 38005499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 8410104 - 8410215
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||    
T  8410104 agctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 8410203  T
Q  120 gcccacctttgg 131  Q
    |||||| |||||    
T  8410204 gcccacttttgg 8410215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 10823033 - 10823156
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  10823033 agctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 10823132  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |||||||||| |||| || |||||    
T  10823133 gcccaccttttgtgggtcggaaac 10823156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 331474 - 331588
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||  ||  ||||||||||    
T  331474 agctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtc 331573  T
Q  120 gcccacctttggtgg 134  Q
    |||||||||||||||    
T  331574 gcccacctttggtgg 331588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 44139463 - 44139580
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||||| ||| ||  ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||    
T  44139463 ttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccac 44139562  T
Q  126 ctttggtggatcagaaac 143  Q
    |  |||||| || |||||    
T  44139563 caatggtgggtcggaaac 44139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 10046609 - 10046482
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||| | ||||||||| |||||||||||||||||||| ||| ||||||| ||| | |||||||||||||||||||  ||  ||||||||||    
T  10046609 agctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgac-agtgcgcatgcctctacgcatgagccggattagtc 10046511  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
    | ||||||||||||| || ||||||||||    
T  10046510 gaccacctttggtgggtcggaaactagtg 10046482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 34722685 - 34722776
Alignment:
Q  52 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||| ||||||||||||| |||||| |||| |||||||| |||  ||||||||||||||||||||| ||||||||||||    
T  34722685 gggttcgattctcagggagaacaacgcttggtcagtgcacatgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaac 34722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 41032010 - 41031911
Alignment:
Q  49 accgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactagtg 148  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||  |||||||||| |||||||||||||| || ||||| ||||    
T  41032010 accgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtg 41031911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 6358288 - 6358170
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||||||| ||||| ||||||||  |||||| | |||||||  ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||    
T  6358288 aagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 6358189  T
Q  116 agtcgcccacctttggtgg 134  Q
    ||||| ||||| |||||||    
T  6358188 agtcgtccaccattggtgg 6358170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 45263783 - 45263686
Alignment:
Q  37 tatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||  ||||||| |||| || |||||||||    
T  45263783 tatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgctcatctttggtgg 45263686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 3849044 - 3848937
Alignment:
Q  23 tcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcc 122  Q
    ||||| |||||| ||||| ||| |||||||||||||||| ||||||| ||||||| |||||||| ||||||| |||||||| ||| ||||||||||||      
T  3849044 tcatttcaaggacgtatctggagaataccgggttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgtt 3848945  T
Q  123 cacctttg 130  Q
    ||||||||    
T  3848944 cacctttg 3848937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 7787055 - 7787146
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||||||||||||||  ||||||||||||  |||||||||| ||||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  7787055 aataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttggtggatc 7787146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 18902663 - 18902540
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||  |||  ||||||||||||||||| || ||||||||||||||| ||||||||| || |||||||| |||  | ||||||||    
T  18902663 agctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtc 18902564  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| || |||||    
T  18902563 gcccacctttggtgggtcggaaac 18902540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 41220608 - 41220691
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  41220608 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgc 41220691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 3644020 - 3643906
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||||||||  ||||||||||| ||||   | | |||||||||||||||||||||||||||||||||||  ||   |||||||||    
T  3644020 agctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtc 3643921  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||||||||    
T  3643920 gtccacctttggtgg 3643906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 19976940 - 19976830
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  |||||||||||||||| |||||||||| |||| |||| ||||||||||| ||||||||   | ||| |||||||    
T  19976940 agctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcataagtcgaattagtc 19976841  T
Q  120 gcccacctttg 130  Q
    |||||||||||    
T  19976840 gcccacctttg 19976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 22593108 - 22593221
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||| | ||||||||| |||||||||||||| |||||||||||||||||||||||||  ||  ||||||||||    
T  22593108 agctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatgagccggattagtc 22593206  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||||||||    
T  22593207 gtccacctttggtgg 22593221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 37560142 - 37560256
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||| ||| |||   |||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||  ||||||    
T  37560142 aagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctctacgcacgagccggatt 37560241  T
Q  116 agtcgcccacctttg 130  Q
    | ||| |||||||||    
T  37560242 aatcgtccacctttg 37560256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 12455309 - 12455406
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||  |||||| |||||||||| |||||||||||||||||||||| |||  |||||||||||| |||| ||||||| || |||||    
T  12455309 aataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaac 12455406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 35946712 - 35946835
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||| ||||| ||||||||  ||||||| |||||||||  ||||| ||||||||||||||| || |||||||||||||| |||  ||||||||||    
T  35946712 agctcattctaaggacgtatccggggaataccgagttcgattcctagggg-aacaacgcttggccattgtgcatgcctctacgcacgagccggattagtc 35946810  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    | ||||| ||||||| || ||||||    
T  35946811 gtccaccattggtgggtcggaaact 35946835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 7747247 - 7747370
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  |||||||||||||||||  ||| ||||||||| |||||||||| ||||||||||||||  ||  ||||||||||    
T  7747247 agctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtc 7747346  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |  ||||||| |||| || |||||    
T  7747347 gttcacctttagtgggtcggaaac 7747370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 143
Target Start/End: Original strand, 10669593 - 10669688
Alignment:
Q  48 taccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||| |||||||| ||| |||||||| |||  |||||||||||| || |||||    
T  10669593 taccgggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaac 10669688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 11069851 - 11069974
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| ||||  |||||| ||||||||||  ||||||||||||| ||||||||||||||| ||||||||| |||   | |||||||    
T  11069851 agctcattccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtc 11069950  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  11069951 gtccaccgttggtgggtcggaaac 11069974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 21286417 - 21286500
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||    
T  21286417 agctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgc 21286500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 34346420 - 34346297
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| | ||  ||||| ||||| |||| |||||||||||||| ||||||||||| ||||||||||||||  || || ||||| ||    
T  34346420 agctcattccaaggacgtacctggggaatactgggtttgattatcagggggaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatc 34346321  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||||||| || |||||    
T  34346320 gctcacctttggtgggtcggaaac 34346297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 39807022 - 39806895
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    |||| |||| || |||||| ||| ||||  ||||||||||||||||| || | | ||||||| ||||||||||||||||||||||| | ||| |||||||    
T  39807022 aagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggatt 39806923  T
Q  116 agtcgcccacctttggtggatcagaaac 143  Q
    ||||  ||||||||||||| ||| ||||    
T  39806922 agtcatccacctttggtggttcataaac 39806895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 44945567 - 44945689
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||  |||| ||||| ||||| ||||| ||| || ||||||||||||  ||||||||||||||||||| |||  ||||||||||    
T  44945567 agctccttccaaggacgtactcggagaatactgggtttgattcccagagg-aacaacgcttggatagtgcgcatgcctctacgcacgagccggattagtc 44945665  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |||||||||| ||||||| |||||    
T  44945666 gcccacctttagtggatcggaaac 44945689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 2550841 - 2550955
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| ||||||||  |||| |||||||||||| |||| |||||||| ||| ||||||||||||| ||||||||  ||  ||||||||||    
T  2550841 agctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggattagtc 2550940  T
Q  120 gcccacctttggtgg 134  Q
    |||||| ||||||||    
T  2550941 gcccacttttggtgg 2550955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 3811798 - 3811701
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| |||||||||||| ||| ||||||||| ||||| || |||||||||||||||||  ||  ||||||| ||||||||||||||||| ||||||||    
T  3811798 aatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaac 3811701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 20612669 - 20612588
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagg-gggaacaacgcttggccagtgcgcatgcctcta 100  Q
    ||||| |||||||| ||||| |||  |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  20612669 agctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctcta 20612588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 28616486 - 28616389
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| ||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| |||  | ||||||||||||| |||| |||| ||||||||    
T  28616486 aatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaac 28616389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 9360879 - 9360767
Alignment:
Q  22 ctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 121  Q
    ||||||||||||| ||| ||||  |||||| |||||||||   || || ||||||| ||||||||||||||||||||||||| |||  || |||||||||    
T  9360879 ctcattccaaggacgtacccggggaataccaggttcgattactagaggaaacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgc 9360780  T
Q  122 ccacctttggtgg 134  Q
    |||||||| ||||    
T  9360779 ccacctttagtgg 9360767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 15234194 - 15234111
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||| ||||  |||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  15234194 agctccttccaaggacgtacccggggaatactaggttcgattctcagggggaacaacacttgaccagtgcgcatgcctctacgc 15234111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 18649163 - 18649045
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||  ||||||||||| || | |  |||||||| ||||||||||||| |||||||   |||| ||||||||||||||||||||  || |||||||    
T  18649163 aagaagctgcttccaaggatgcattcagggaataccggattcgattctcaggaggaacaatatttgggcagtgcgcatgcctctacgcatgagtcggatt 18649064  T
Q  116 agtcgcccacctttggtgg 134  Q
    |||||| ||| ||||||||    
T  18649063 agtcgctcacttttggtgg 18649045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 39201615 - 39201509
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaacta 145  Q
    |||||||  ||||||||||||||||||||| | |||||||||| ||||||||||||||  ||  |||||||||||  |||||||||||| || |||||      
T  39201615 aataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccg 39201516  T
Q  146 gtgaaaa 152  Q
    |||||||    
T  39201515 gtgaaaa 39201509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 13026538 - 13026421
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| |||||| |  |||| ||||||||||| ||||| ||||||| | |||||||||||||||||||||||||  ||  ||||||||||  ||||    
T  13026538 ttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcatgagccggattagtcagccac 13026439  T
Q  126 ctttggtggatcagaaac 143  Q
     |||||| | ||||||||    
T  13026438 ttttggtaggtcagaaac 13026421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 14169736 - 14169619
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| |||| |||  |||| |||||||||||||| ||||||||||| |||| |||||||||||| ||||||||  ||  ||||||||||| | ||    
T  14169736 ttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctac 14169637  T
Q  126 ctttggtggatcagaaac 143  Q
    | ||||||| || |||||    
T  14169636 cattggtgggtcggaaac 14169619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 21180447 - 21180346
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||| | |||||||| |||||||| || || ||||||| |||||||||||| ||||||||||||| |||  ||||||||||    
T  21180447 agctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcacatgcctctacgcacgagccggattagtc 21180348  T
Q  120 gc 121  Q
    ||    
T  21180347 gc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 27725951 - 27726036
Alignment:
Q  58 gattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| | |  |||||||||||||||||  |||||| || |||||    
T  27725951 gattctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaac 27726036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 16034916 - 16035016
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| |||||||   |||||||||||||||| ||||| ||||||||||||| |||||| |||||||| ||||  |||  |||||||||||| |||    
T  16034916 ttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggattagtcgctcac 16035015  T
Q  126 c 126  Q
    |    
T  16035016 c 16035016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 34356185 - 34356259
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 100  Q
    ||||||||| ||||| ||  ||||||||||||||||  ||||||||||||| ||||| |||||||||||||||||    
T  34356185 ttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctcta 34356259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 13513978 - 13514039
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttg 81  Q
    ||||| ||||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||    
T  13513978 agctctttccaaggatgtatccggaaaataccggactcgattcacagagggaacaacgcttg 13514039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 16325602 - 16325691
Alignment:
Q  54 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||  ||  | ||||||||| ||||| ||||||| || |||||    
T  16325602 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaac 16325691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 24179575 - 24179655
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||||||  ||  ||||||||||| ||| |||||||||    
T  24179575 ggttcgattctcagggg-aacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgg 24179655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 26805306 - 26805383
Alignment:
Q  57 cgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||| ||||| | ||| ||| ||||||||||| |||||||||||||  || ||||||||||||||||||||||||||    
T  26805306 cgattttcaggagaaacgacgtttggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtgg 26805383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 29653625 - 29653713
Alignment:
Q  45 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||| |||||||  |||||  |||||||||||| |||||||||||||||||||| |||  || |||||||| |||||||||||||    
T  29653625 aaataccggattcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg-ccacctttggtgg 29653713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 2528445 - 2528393
Alignment:
Q  49 accgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 101  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  2528445 accgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctctac 2528393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 2149319 - 2149244
Alignment:
Q  29 caaggatgtatccggaaaataccgg-gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||||||| ||  |||||||| ||||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  2149319 caaggatgtatctggggaataccggagttcgattcactgggggaataacgtttggccagtgcgcatgcctctacgc 2149244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 12864197 - 12864320
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || |||| |||  |||||||| |||||||  ||||||||||||| ||||| |||||||||||||||| |||  ||  | ||||||||    
T  12864197 agctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatgagccagattagtc 12864296  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  12864297 gtccaccattggtgggtcggaaac 12864320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 14853491 - 14853381
Alignment:
Q  29 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctc--gaatcggattagtcgcccacc 126  Q
    |||||||||||||||  |||||| | ||||||| ||||||||||||||  |||||||||||| ||||||||   |||  || |||||||||||| ||| |    
T  14853491 caaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcgtatgcctctctactcatgagtcggattagtcgtccatc 14853392  T
Q  127 tttggtggatc 137  Q
    ||| |||||||    
T  14853391 tttagtggatc 14853381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 37805016 - 37804941
Alignment:
Q  28 ccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||| ||| |||  ||||||||| |||||||| ||||||||| |||||||||| |||||||||||| ||||||    
T  37805016 ccaaggacgtacccgagaaataccggattcgattcacagggggaataacgcttggctagtgcgcatgccgctacgc 37804941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 29422188 - 29422310
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| ||| ||||  ||||| ||||||||||  ||| ||||||||| |||||||| || |||| ||| ||||| |||  ||||||||||    
T  29422188 agctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatgagcatacctttacgcacgagccggattagtc 29422287  T
Q  120 gcccacctttggtggatcagaaa 142  Q
    | ||||||||| |||||| ||||    
T  29422288 gtccacctttgatggatcggaaa 29422310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 15079462 - 15079539
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||| ||| ||||  ||||| ||||||||||  |||||||||||||||||| |||||| ||||| ||||||||    
T  15079462 ttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgc 15079539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 25604574 - 25604650
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||| ||||||||||||||||||||| ||||||| ||  ||||||||||| ||| |||||  ||||||||||||||    
T  25604574 ttccaaagatgtatccggaaaataccggattcgatt-tccaggggaacaacgtttgaccagtatgcatgcctctacgc 25604650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 25549727 - 25549818
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||| |||||||||||| ||||  ||||||  ||||| ||||| ||||||||||||| |||  ||||||||||| ||| ||||| ||||||    
T  25549727 aatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctctacgcacgagccggattagtcgtccatctttgatggatc 25549818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 28525542 - 28525479
Alignment:
Q  66 gggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    |||| |||||| |||||||||||||||||||||||||| |||  ||||||||||  ||||||||    
T  28525542 ggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccaccttt 28525479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 41187682 - 41187765
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||| ||||| ||||| | | |||||||||||||||| | |||||||||||| |||| ||||||  |||||||||||||    
T  41187682 agctccttctaaggacgtatctgaagaataccgggttcgattatgagggggaacaacacttgaccagtgtccatgcctctacgc 41187765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 43303399 - 43303345
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 100  Q
    |||| ||||||||||| ||| ||||||||||||||| ||||| ||||||||||||    
T  43303399 aatatcgggttcgattttcaaggggaacaacgcttgaccagtacgcatgcctcta 43303345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 5035277 - 5035370
Alignment:
Q  36 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    ||||||||||||||  ||||||||||| |||    ||||| ||||| |||||||||||| |||||||| |||| ||||||| ||  ||||||||    
T  5035277 gtatccggaaaatattgggttcgattcccagaaaaaacaatgcttgaccagtgcgcatgtctctacgcacgaaccggattaatcatccaccttt 5035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 13104908 - 13104875
Alignment:
Q  70 gaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||||||||||||||||||||||    
T  13104908 gaacaacgcttggccagtgcgcatgcctctacgc 13104875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 33005751 - 33005807
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||  ||| |||||| |||||| ||||||||||||||||||||||||||    
T  33005751 aataccgggttctgttcccagggg-aacaacacttggccagtgcgcatgcctctacgc 33005807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 41187822 - 41187923
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||||||   |||||||  ||| ||||| |||   ||||||||||| |||||||||||||||||||||  ||  ||||||||||    
T  41187822 agctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatgcctctacgcatgagacggattagtc 41187921  T
Q  120 gc 121  Q
    ||    
T  41187922 gc 41187923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 31740868 - 31740777
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    |||||| | ||||||| ||||||   ||||||||||| ||||||| |||| |||| || ||| || || |||||| ||||||||||||||||    
T  31740868 aataccagattcgattatcagggattacaacgcttggtcagtgcgaatgcttctaggcacgagtcagactagtcgtccacctttggtggatc 31740777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 33634546 - 33634455
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||||||||||||||| ||| || || |||| || ||||||||||||||| || ||| |||  || |||||||  | ||||||||||||||    
T  33634546 aataccgggttcgattcccagaggaaataacgtttagccagtgcgcatgccgctgcgcacgagccgaattagtcatctacctttggtggatc 33634455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 20116696 - 20116622
Alignment:
Q  69 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||| |||||| |||||||||||||||||  ||  |||||||| || ||||||||| ||| || |||||    
T  20116696 ggaacaacgcatggccaatgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaac 20116622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 10106577 - 10106670
Alignment:
Q  36 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    |||||||  ||||||||| ||||||||||||  |||||||||||||   || |||||||| |||| ||   | |||||||||||| ||||||||    
T  10106577 gtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttctatgcataagtcggattagtcgtccaccttt 10106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 16813251 - 16813186
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 132  Q
    ||||||||||| ||| ||||| |||||||||||| || |||  ||||||||||| ||| |||||||    
T  16813251 ggggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggt 16813186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 16852530 - 16852465
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 132  Q
    ||||||||||| ||| ||||| |||||||||||| || |||  ||||||||||| ||| |||||||    
T  16852530 ggggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggt 16852465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 29421302 - 29421383
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactagtg 148  Q
    |||||||||||||||| ||||| ||||||||||||||  || ||| | |||||| | || |||||| |||| ||||| ||||    
T  29421302 ggggaacaacgcttgggcagtgagcatgcctctacgcatgagtcgaagtagtcgtctacatttggtagatcggaaaccagtg 29421383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 30721942 - 30721885
Alignment:
Q  66 gggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccc 123  Q
    ||||||||||| ||||| ||||||||||| |||||||   || |||||||||||||||    
T  30721942 gggggaacaacacttggtcagtgcgcatgtctctacgtatgagtcggattagtcgccc 30721885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 40969022 - 40968965
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||||  |||||  ||||||| |||| ||||||| ||||||||||||    
T  40969022 aataccgggttcgatttccagggaaaacaacgtttggtcagtgcgaatgcctctacgc 40968965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 12642 - 12769
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||| ||  ||||  |||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||| |||| ||||||    
T  12642 aagaagctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggatt 12741  T
Q  116 agtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| ||| ||||||||    
T  12742 agtcgcccacctttgatgggtcagaaac 12769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 1605917 - 1606040
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||| |||||| |||||||||  |||||||||||||||||||||||||| |||||||||| ||| ||  ||||||||||    
T  1605917 agctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtc 1606016  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |||||||||||||||||| |||||    
T  1606017 gcccacctttggtggatcggaaac 1606040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 34659202 - 34659315
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||| ||||||| ||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  34659202 agctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtc 34659301  T
Q  120 gcccacctttggtg 133  Q
    ||||||| ||||||    
T  34659302 gcccaccattggtg 34659315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 38578994 - 38578877
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||| ||||  |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||    
T  38578994 ttccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 38578895  T
Q  126 ctttggtggatcagaaac 143  Q
    ||||||||| || |||||    
T  38578894 ctttggtgggtcggaaac 38578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 22993500 - 22993377
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||| ||||||||||||  ||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  22993500 agctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 22993401  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||||||| ||||||||    
T  22993400 gctcacctttggtgggtcagaaac 22993377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 17748509 - 17748392
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| |||| |||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||  ||||||||||| ||||    
T  17748509 ttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccac 17748410  T
Q  126 ctttggtggatcagaaac 143  Q
    ||||| ||| || |||||    
T  17748409 ctttgttgggtcggaaac 17748392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 22973943 - 22974066
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||  |||  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||  | ||||||||    
T  22973943 agctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtc 22974042  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||||||| ||||||||    
T  22974043 gtccacctttggtgggtcagaaac 22974066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 48804659 - 48804782
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  48804659 agctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 48804758  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  48804759 gtccaccattggtgggtcggaaac 48804782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 13095834 - 13095957
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| ||| ||||  |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  13095834 agctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 13095933  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||||||| || |||||    
T  13095934 gctcacctttggtgggtcggaaac 13095957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 18785641 - 18785768
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||| ||| ||||  |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||  |||  |||||    
T  18785641 aagaagctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggatt 18785740  T
Q  116 agtcgcccacctttggtggatcagaaac 143  Q
    |||||  ||||| |||||| || |||||    
T  18785741 agtcgttcacctctggtgggtcggaaac 18785768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 1797436 - 1797553
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||||||   ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| |||  |||| |||||    
T  1797436 agctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtc 1797535  T
Q  120 gcccacctttggtggatc 137  Q
    | ||| ||||| ||||||    
T  1797536 gtccatctttgatggatc 1797553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 43862105 - 43861988
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || ||||| ||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||  ||||||||||    
T  43862105 agctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtc 43862006  T
Q  120 gcccacctttggtggatc 137  Q
       |||||||||||||||    
T  43862005 attcacctttggtggatc 43861988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 10048009 - 10047926
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  10048009 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgc 10047926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 47341852 - 47341935
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||| ||| ||||  ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  47341852 agctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgc 47341935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 16802099 - 16802213
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||||| ||||||||| ||| ||||||||| |||||||||||| |||||||||||| |||  ||||||||||    
T  16802099 agctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacgagccggattagtc 16802198  T
Q  120 gcccacctttggtgg 134  Q
    || |||| |||||||    
T  16802199 gctcaccattggtgg 16802213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 5069938 - 5069825
Alignment:
Q  30 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    ||||| ||| |||| |||||||||||||||||  |||| |||||||||||| || |||| |||||||||||||| | |  ||||||||||||||||||||    
T  5069938 aaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcacaagccggattagtcgcccaccttt 5069839  T
Q  130 ggtggatcagaaac 143  Q
    ||||| || |||||    
T  5069838 ggtgggtcggaaac 5069825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 21190913 - 21190809
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||||||  |||||||  |||||||||||||||||  ||| ||| ||||||||||| ||||||||||||||||||| ||| || ||||||||    
T  21190913 agctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtc 21190814  T
Q  120 gccca 124  Q
    |||||    
T  21190813 gccca 21190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 43346912 - 43346784
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || ||||| ||  |||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||||  |||  ||||||||||    
T  43346912 agctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacgagccggattagtc 43346813  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
    || || ||||||||| || ||||| ||||    
T  43346812 gctcatctttggtgggtcggaaaccagtg 43346784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 49142776 - 49142692
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    |||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||| |||  ||||||||| |||||||||||    
T  49142776 aataccgggttcgattcctagggggaacaacgcttagccagtgcacatgcctctacgcacgagccggattagttgcccacctttg 49142692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 27028255 - 27028378
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||| | ||| | || ||||||| |||||||||  ||||||||||||| |||||||||||||||||||||||| |  ||   |||||||||    
T  27028255 agctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtc 27028354  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||||||| || |||||    
T  27028355 gctcacctttggtgggtcggaaac 27028378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 43925488 - 43925571
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  43925488 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgc 43925571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 36619361 - 36619259
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaacta 145  Q
    ||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||  ||  ||||||||||| ||||| ||||||| ||| |||| |    
T  36619361 aataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcaaaaacca 36619262  T
Q  146 gtg 148  Q
    |||    
T  36619261 gtg 36619259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 3353427 - 3353523
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| |||| |||||||||||||  ||||||  ||||||||||||||||||||||||| |||  ||||||||||| ||||||||| ||||||||||||    
T  3353427 aatatcgggatcgattctcaggga-aacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaac 3353523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 23658189 - 23658278
Alignment:
Q  54 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||| | |||  ||||||||||| ||| ||||||||| ||||||||    
T  23658189 gttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtcagaaac 23658278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 26423394 - 26423306
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||||| |||  | |||||||||  ||||||||||||    
T  26423394 aataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacctttggtgg 26423306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 28396277 - 28396170
Alignment:
Q  36 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgga 135  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||| ||  |||||||||||| |||||  ||  ||||||||||| | |||||||||||     
T  28396277 gtatccgggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtggg 28396178  T
Q  136 tcagaaac 143  Q
    || |||||    
T  28396177 tcggaaac 28396170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 42210395 - 42210272
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||||||   |||||||| |||||||| ||| |  ||||||| ||||||||||||||||||||||||| |||  ||||||| ||    
T  42210395 agctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacgagccggattaatc 42210296  T
Q  120 gcccacctttggtggatcagaaac 143  Q
     |||||| ||||||| || |||||    
T  42210295 acccaccgttggtgggtcggaaac 42210272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 14535293 - 14535391
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 144  Q
    |||||||||||  ||| |||||| ||||||| ||||||||||| |||||||||||||| |||   |||||||||||||||| ||| ||| |||||||||    
T  14535293 aataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgcacgagctggattagtcgcccaccattgatgggtcagaaact 14535391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 41945497 - 41945562
Alignment:
Q  68 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 133  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||| ||||||||||||    
T  41945497 gggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtg 41945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 27875195 - 27875107
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||| |||||||||||||  || ||| |||||||| |||||||| ||||    
T  27875195 aataccggattcgattcccagggggaataacacttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgg 27875107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 30827294 - 30827378
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    |||||| ||||||||| |||||| ||||||| |||||||||| ||||||||||||||| |||  ||||||||||| | |||||||    
T  30827294 aataccaggttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgtctacctttg 30827378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 21530724 - 21530847
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||  ||||| ||||| ||||| ||||||||||||| ||||| |||||| ||||||||||||| |||  || |||| ||    
T  21530724 agctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgcacgagccgaattaatc 21530823  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||||||| || |||||    
T  21530824 gctcacctttggtgggtcggaaac 21530847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 39474943 - 39475030
Alignment:
Q  47 ataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||||||||||  | |||||||||||||||| |||||||||| |||||||||  ||  ||||||||||| |||||||| ||||    
T  39474943 ataccgggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgg 39475030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 45447946 - 45448069
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| |||  ||||||| |||||||||  ||||| |||||||||||||| ||||||||| ||||||| | | | || ||||||||    
T  45447946 agctccttccaaggacgtacccgagaaataccaggttcgatttccagggagaacaacgcttggctagtgcgcatccctctacacactagtcagattagtc 45448045  T
Q  120 gcccacctttggtggatcagaaac 143  Q
     ||||||||| |||| || |||||    
T  45448046 acccacctttagtgggtcggaaac 45448069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 14650293 - 14650407
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||| |||| |||||||||||  |||| ||||||| ||||| |||||||  ||||||||||||  ||  ||| ||||||    
T  14650293 agctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctctacgcatgagccgggttagtc 14650392  T
Q  120 gcccacctttggtgg 134  Q
    || ||||||||||||    
T  14650393 gctcacctttggtgg 14650407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 5039551 - 5039434
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||  ||||||| |||  ||||||| |||||||||  ||| |||||||| ||||| |||||| ||| |||||||||  ||  ||||||||||    
T  5039551 agctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgcacatacctctacgcatgagccggattagtc 5039452  T
Q  120 gcccacctttggtggatc 137  Q
    || |||||||||||||||    
T  5039451 gctcacctttggtggatc 5039434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 8734773 - 8734696
Alignment:
Q  66 gggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||| |||||| ||||||||||||||| |||| |||  | ||||||||||||||||||||||| || |||||    
T  8734773 gggggaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaac 8734696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 10317852 - 10317756
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||| ||||||||| ||| ||||| ||||||| ||||||||| ||   || | |||||||||| ||||||||||||||| |||||    
T  10317852 aataccgggttcgattcccagggggaataacacttggtcagtgcgtatgcctctatgc-ataagcagattagtcgctcacctttggtggatcggaaac 10317756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 24969448 - 24969336
Alignment:
Q  29 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 128  Q
    |||||| ||||| ||||||||||||||||||||  |||||  |||||| |||||||||||||| ||||||||||  | | |||||||| |||| || |||    
T  24969448 caaggacgtatctggaaaataccgggttcgatttccaggg--aacaacacttggccagtgcgcgtgcctctacgtacaagtcggattaatcgctcatctt 24969351  T
Q  129 tggtggatcagaaac 143  Q
    || ||| || |||||    
T  24969350 tgatggctcggaaac 24969336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 42032068 - 42032155
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||| ||||||||| ||| ||||  |||||| |||||||||| || ||||||||||| ||||||||||| ||| | |||||||    
T  42032068 aagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatctacgc 42032155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 45960135 - 45960013
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||| || || ||||| ||| ||||| || ||| |||||| ||||| ||||||||||||||||||||   |  ||||||||||    
T  45960135 agctctttccaaggacgtatcggggaa-taccgagtttgattcccaagggcaacaacacttggtcagtgcgcatgcctctacgcataagccggattagtc 45960037  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||| |||||| |||||    
T  45960036 gctcacctttgatggatcggaaac 45960013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 4195327 - 4195221
Alignment:
Q  28 ccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacct 127  Q
    ||||||| ||||||||  ||||||| ||||||||  |||| ||||||||  ||||| |||||||||||||||||||  ||  |||||||| || |||||     
T  4195327 ccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggattagccgtccacca 4195228  T
Q  128 ttggtgg 134  Q
    |||||||    
T  4195227 ttggtgg 4195221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 20247306 - 20247197
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||||||| |  |  |||||| ||||||||||||| |||||||||||||||| |||| | |||| |||||||  ||  |||||||    
T  20247306 aagaagctccttccaaggatgta-cttgggaataccaggttcgattctcatggggaacaacgcttgggcagtacacatgtctctacgtacgggtcggatt 20247208  T
Q  116 agtcgcccacc 126  Q
    ||||| |||||    
T  20247207 agtcgtccacc 20247197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 22268162 - 22268088
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 94  Q
    ||||||||||||||| |||   ||  ||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  22268162 agctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgcgcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 365142 - 365199
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||||| |||| ||||||||||||   ||||||||||||||||||||    
T  365142 aataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgc 365199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 37514897 - 37514993
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatta 116  Q
    ||||| |||||||||  || ||||  ||||| |||||||||| |||| |||||||||| |||| ||||||||||| |||||||| |||  |||||||    
T  37514897 agctccttccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggatta 37514993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 45697287 - 45697200
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| |||||| ||||  ||||||||||||||||||||  || | || ||||||| ||||||||||||| || |||||    
T  45697287 ttcgattctcagggg-aacaacacttgatcagtgcgcatgcctctacgcatgagttgggttagtcgtccacctttggtgggtcggaaac 45697200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 3603355 - 3603447
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggc----cagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||||||||||||  |||||||||||| |||||    |||||||||||||||||||| |||  ||||||| |||  ||| ||||||||    
T  3603355 aataccgggttcgattctttgggggaacaacgtttggccggtcagtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgg 3603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 28744183 - 28744262
Alignment:
Q  65 agggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 144  Q
    ||||||||||| ||||||||||| ||||| |||||||   |||  ||||||||||| ||||||||||||| || ||||||    
T  28744183 agggggaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaact 28744262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 29151942 - 29151997
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 101  Q
    ||||||||||||||||| ||||  |||||||| ||| |||||||||||||||||||    
T  29151942 aataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatgcctctac 29151997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 32823253 - 32823320
Alignment:
Q  54 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 121  Q
    ||||||||| ||||||||||||| ||||||| ||| | |||||||||||| |||  ||||||||||||    
T  32823253 gttcgattcccagggggaacaacacttggccggtgtgtatgcctctacgcacgagccggattagtcgc 32823320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 39420861 - 39420923
Alignment:
Q  68 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    |||||||||||||||||||||||| |||||||||||  ||  ||||||||||| | |||||||    
T  39420861 gggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttg 39420923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 48551878 - 48551956
Alignment:
Q  65 agggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| |||||||| ||||||| ||||||||||||||||   ||  ||||||||||| ||||||||| |||||| |||||    
T  48551878 agggtgaacaacggttggccaatgcgcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaac 48551956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 4706117 - 4706000
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || |||||  | ||||||  ||||||||| | ||||||||||||| || |||| | ||||||| ||||||| |||   |||||||||    
T  4706117 agctccttccaatgacgtatctaggaaatacatggttcgatttttagggggaacaacgtttagccattacgcatgcttctacgcacgagctggattagtc 4706018  T
Q  120 gcccacctttggtggatc 137  Q
    | ||||||||||| ||||    
T  4706017 gtccacctttggtagatc 4706000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 19914787 - 19914726
Alignment:
Q  69 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    ||||||||||||||||| |||||||||||||||||  ||  | ||||| |||||||||||||    
T  19914787 ggaacaacgcttggccaatgcgcatgcctctacgcatgagccagattaatcgcccacctttg 19914726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 46414685 - 46414734
Alignment:
Q  54 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||  ||| |||||||||||| |||||||||||||||||    
T  46414685 gttcgattctcaggatgaataacgcttggccaatgcgcatgcctctacgc 46414734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 4228884 - 4228781
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||||||   |||||| |||||||||  ||||   ||||||| ||||||||||| |||||| ||||||  ||  ||||||||||    
T  4228884 agctccttccaaggacgtatccgaggaataccaggttcgatttccagg---aacaacgtttggccagtgcacatgcccctacgcatgagccggattagtc 4228788  T
Q  120 gcccacc 126  Q
    |||||||    
T  4228787 gcccacc 4228781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 25197230 - 25197150
Alignment:
Q  40 ccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    |||||||||||| | ||||||||| |  |||||||||||||| || ||||||||| |||||| | | | ||||||||||||    
T  25197230 ccggaaaatacctgattcgattcttaaagggaacaacgcttgaccggtgcgcatgtctctacacacaagtcggattagtcg 25197150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 32768984 - 32769036
Alignment:
Q  91 catgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||| ||| ||||||||||||  ||||||||||||||| |||||    
T  32768984 catgcctctacgcacgagtcggattagtcgttcacctttggtggatcggaaac 32769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 4973217 - 4973130
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 133  Q
    |||| ||||||||||||  | |||||| ||| |||| ||| ||||||||||||||||  |||  ||||||||||| ||| ||||||||    
T  4973217 aatatcgggttcgattcctacggggaataacacttgaccaatgcgcatgcctctacgtacgagccggattagtcgtccagctttggtg 4973130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 48244463 - 48244372
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    |||||||||||| |||   | ||||||||| |||||  |||||||  |||||||||||  ||  |||||||||||| |||||||||||||||    
T  48244463 aataccgggttcaatttctaaggggaacaatgcttgatcagtgcgtttgcctctacgcatgagccggattagtcgctcacctttggtggatc 48244372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 9685715 - 9685771
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaac 76  Q
    ||||| ||||||| | ||||||||  |||| ||||||||||||||||| ||||||||    
T  9685715 agctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 9685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 38988934 - 38988990
Alignment:
Q  78 cttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||| |||||| |||||||||||||  ||| |||||||||||| || |||||||||    
T  38988934 cttggtcagtgcacatgcctctacgcatgaaccggattagtcgctcatctttggtgg 38988990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 43032892 - 43033001
Alignment:
Q  34 atgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 133  Q
    ||||||| || ||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||||||||||||    
T  43032892 atgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtg 43032991  T
Q  134 gatcagaaac 143  Q
    | ||||||||    
T  43032992 ggtcagaaac 43033001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 18373987 - 18374101
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||  ||  ||||||||||    
T  18373987 agctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtc 18374086  T
Q  120 gcccacctttggtgg 134  Q
    | ||| |||||||||    
T  18374087 gtccaactttggtgg 18374101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 17981418 - 17981531
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||| |||| |||||| |||||||||||||| ||| ||| ||||||     
T  17981418 agctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcacgagtcgaattagtt 17981517  T
Q  120 gcccacctttggtg 133  Q
    ||||| ||||||||    
T  17981518 gcccagctttggtg 17981531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 14666204 - 14666090
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||| | |  | ||||||||    
T  14666204 agctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtc 14666105  T
Q  120 gcccacctttggtgg 134  Q
    ||||||  |||||||    
T  14666104 gcccacagttggtgg 14666090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 33401906 - 33401814
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatca 138  Q
    |||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||  || ||||||||||||||||||||| ||||||||    
T  33401906 aataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatgagtcggattagtcgcccacctttagtggatca 33401814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 2964053 - 2964176
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||| | ||| ||||  ||||||| |||||||||  | | ||||||||||||||||| || |||||||||||||| |||| ||||||||||    
T  2964053 agctccttccaagaacgtacccggggaataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtc 2964152  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| ||||||||    
T  2964153 gcccacctttggtgggtcagaaac 2964176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 15884688 - 15884566
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||  ||||||||||||||||| |||||| |||||| |||||| ||||||||||||||||||| |||  ||||||||||    
T  15884688 agctccttccaaggacgtacctggggaataccgggttcgattcccagggg-aacaacacttggcaagtgcgcatgcctctacgcacgagccggattagtc 15884590  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| || |||||    
T  15884589 gcccacctttggtgggtcggaaac 15884566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 13358999 - 13359093
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggat 114  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||| ||| ||||||    
T  13358999 agctccttccaaagatgtgtccggaaaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcatacctctacgcacgagtcggat 13359093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 583816 - 583912
Alignment:
Q  45 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||||  ||||  ||||||||||| |||||||||||||||||||||  || |||||||||||||||||||||| ||||| ||||||    
T  583816 aaataccgggttcgattcctaggg--aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaac 583912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 6100449 - 6100563
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| ||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||  ||  ||||||||||    
T  6100449 agctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtc 6100548  T
Q  120 gcccacctttggtgg 134  Q
    |  ||||||| ||||    
T  6100549 gttcacctttagtgg 6100563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 1013104 - 1013027
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  1013104 ttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgc 1013027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 8141085 - 8141202
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| |||| |||  ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||  ||   | |||||||| ||||    
T  8141085 ttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccac 8141184  T
Q  126 ctttggtggatcagaaac 143  Q
     |||||||| ||||||||    
T  8141185 atttggtgggtcagaaac 8141202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 9860129 - 9860005
Alignment:
Q  20 agctcattccaaggatgtatccggaa-aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagt 118  Q
    ||||| ||||||||| ||||||||   ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| |  ||  | |||||||    
T  9860129 agctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattagt 9860030  T
Q  119 cgcccacctttggtggatcagaaac 143  Q
    || ||||| |||||||||| |||||    
T  9860029 cgtccaccattggtggatcggaaac 9860005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 24837219 - 24837343
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||| | ||| ||||  ||||||| ||||||||| ||||| |||||||||||||||||||  |||||||||| || |||   |||||||||    
T  24837219 agctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctctaagcacgagcaggattagtc 24837318  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    | |||||||||||||||| ||||||    
T  24837319 gtccacctttggtggatcggaaact 24837343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 45521149 - 45521268
Alignment:
Q  23 tcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcc 122  Q
    |||||||||||||||| ||||  ||||||||||||||||| |||||| |||||| ||||  ||||||||||||||||||||  ||  ||||||||||||     
T  45521149 tcattccaaggatgtacccggggaataccgggttcgattcccagggg-aacaacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgct 45521247  T
Q  123 cacctttggtggatcagaaac 143  Q
    |||||||| ||| || |||||    
T  45521248 cacctttgatgggtcggaaac 45521268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 3418646 - 3418523
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||| ||  |||| ||||||||||| | ||| |||||||| |||||||||||||||||| |||||||  || || ||||||||    
T  3418646 agctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtctacgcatgagtcagattagtc 3418547  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | |||||||| |||| ||||||||    
T  3418546 gtccacctttagtgggtcagaaac 3418523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 38922547 - 38922464
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  38922547 agctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctttacgc 38922464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 10927592 - 10927706
Alignment:
Q  29 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 128  Q
    |||||| ||| ||||  |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||  ||  |||||||||||  ||||||    
T  10927592 caaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctt 10927691  T
Q  129 tggtggatcagaaac 143  Q
    | |||| || |||||    
T  10927692 tagtgggtcggaaac 10927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 14846549 - 14846666
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||| ||||| ||| ||||  |||||||||||||||||||||||| ||||| | |||| ||||||||||||||||||||  || || |||     
T  14846549 aagaagctccttctaaggacgtacccggggaataccgggttcgattctcagggg-aacaatgattggtcagtgcgcatgcctctacgcatgagtcagata 14846647  T
Q  116 agtcgcccacctttggtgg 134  Q
    ||||| |||||||||||||    
T  14846648 agtcgtccacctttggtgg 14846666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 2467251 - 2467146
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||| ||  ||  ||||||||||    
T  2467251 agctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatgagccggattagtc 2467152  T
Q  120 gcccac 125  Q
    | ||||    
T  2467151 gtccac 2467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 4479402 - 4479306
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||  ||   |||||||||| ||||||||||||| || |||||    
T  4479402 aataccggattcgattcccagggg-aacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaac 4479306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 6042824 - 6042917
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcag 139  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||  ||  |||||||||||||||||  |||||| ||||    
T  6042824 aataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccaccactggtgggtcag 6042917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 6940535 - 6940608
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcat 93  Q
    ||||||||||||||| |||||||||||||| |||||||||||  |||| ||||||||||||||| |||||||||    
T  6940535 agctcattccaaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcat 6940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 13085501 - 13085605
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||||| |||||||||| || ||||||| |||| ||||||||| |||  | ||||| ||    
T  13085501 agctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctctacgcacgagccagattaatc 13085600  T
Q  120 gccca 124  Q
    |||||    
T  13085601 gccca 13085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 16893920 - 16894027
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    |||||| || ||||||||  |||| |||||||||||| ||||||||| |||||||||||||| | ||||||| |||||  ||  |||||| |||||||||    
T  16893920 ttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtacacatgcctttacgcatgagccggatt-gtcgcccac 16894018  T
Q  126 ctttggtgg 134  Q
    |||||||||    
T  16894019 ctttggtgg 16894027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 26570911 - 26571011
Alignment:
Q  30 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    ||||||||||| || ||||| ||||||| ||||  |||||||||||||||||||||||| | |||| |||||||  ||  ||||||||||| ||||||||    
T  26570911 aaggatgtatctgggaaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccaccttt 26571010  T
Q  130 g 130  Q
    |    
T  26571011 g 26571011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 34846791 - 34846873
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||| ||| |||| || ||||||||||||||| || || ||||||||||||||||||  ||||||||||||||    
T  34846791 agctcattccaaggacgtacccgggaa-taccgggttcgattcccatggtgaacaacgcttggccagtatgcatgcctctacgc 34846873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 44031567 - 44031464
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgc-----gcatgcctctacgctcgaatcggattagtcg 120  Q
    ||||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||||||||      |||||||||| ||| |||  |||||||||||    
T  44031567 ttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtgtgcatgcctctgcgcacgagccggattagtcg 44031468  T
Q  121 ccca 124  Q
    ||||    
T  44031467 ccca 44031464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 44893411 - 44893288
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||||||||| |||   ||||||||||| |||||||||||| |||||||||||||| |||  ||||||| ||    
T  44893411 agctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctctacgcacgagccggattaatc 44893312  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||| ||| ||| || |||||    
T  44893311 gctcacccttgatgggtcggaaac 44893288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 33935842 - 33935761
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacct 127  Q
    |||||||| ||||||||  |||| ||||||| |||||||||||||||||||| |||||  || ||||||||||||| |||||    
T  33935842 aataccggattcgattcctagggagaacaacacttggccagtgcgcatgcctatacgcatgagtcggattagtcgctcacct 33935761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 34710694 - 34710586
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| |||  ||||||||||||| |||||||| |||||| |||||| |||||| ||||||||||||| ||| | | | ||||| |||||| |||     
T  34710694 ttccaaggacgtactcggaaaataccggattcgattcccaggggaaacaacacttggctagtgcgcatgcctttacacacaagtcggactagtcgtccat 34710595  T
Q  126 ctttggtgg 134  Q
    | |||||||    
T  34710594 cattggtgg 34710586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 16291303 - 16291222
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||| |||||||||||||| |||||||||| | |||||||||| ||  ||   ||||||||||| ||||||||||||    
T  16291303 ggttcgattttcagggggaacaacacttggccagtacacatgcctctatgcatgagctggattagtcgctcacctttggtgg 16291222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 43027308 - 43027405
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||| ||||||||||| |||| ||||||||| ||| ||| |||||||||||||||||  ||  ||||||||||| ||| ||||| ||| || |||||    
T  43027308 aatactgggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaac 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 8587033 - 8586989
Alignment:
Q  59 attctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||| |||||||||||||||||||||||||||||| |||||||||    
T  8587033 attcccagggggaacaacgcttggccagtgcgcatacctctacgc 8586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 11785893 - 11785975
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||| ||| ||||  |||||||| |||||||| || ||||| ||||| |||| ||||| ||||||||||||||    
T  11785893 agctcattccaaggacgtacccggggaataccggattcgattc-caaggggagcaacgtttgggcagtgtgcatgcctctacgc 11785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 27975900 - 27975987
Alignment:
Q  52 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcag 139  Q
    ||||||||||| |||  |||||||| ||||  ||||| ||||||||||||||| ||  ||||||| |||||||||||| |||| ||||    
T  27975900 gggttcgattcccagaaggaacaacacttgatcagtgtgcatgcctctacgcttgagccggattaatcgcccacctttagtgggtcag 27975987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 28033169 - 28033256
Alignment:
Q  52 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcag 139  Q
    ||||||||||| |||  |||||||| ||||  ||||| ||||||||||||||| ||  ||||||| |||||||||||| |||| ||||    
T  28033169 gggttcgattcccagaaggaacaacacttgatcagtgtgcatgcctctacgcttgagccggattaatcgcccacctttagtgggtcag 28033256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 22810057 - 22810130
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 94  Q
    ||||| ||||||||| ||||||||| || | |||||||||||| | |||| |||||||||||| |||||||||||    
T  22810057 agctccttccaaggacgtatccggagaacatcgggttcgattccctgggg-aacaacgcttggtcagtgcgcatg 22810130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 23895578 - 23895668
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| ||| |||| || |||||||||||||||||||||||| ||||||||| |||   |||||| ||| ||||||||| ||| || |||||    
T  23895578 ggttggatcctcatggagaacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttgatgggtcggaaac 23895668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 29933750 - 29933831
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 102  Q
    ||||| ||| ||| ||||||||||| ||||| ||||||||||| ||||| ||||||| |||| ||||||  ||||||||||||    
T  29933750 agctccttctaagaatgtatccggagaatac-gggttcgattcccagggagaacaacacttgaccagtgtacatgcctctacg 29933831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 13358047 - 13357966
Alignment:
Q  62 ctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||||| ||||||| || ||||||||||| || |||  ||||||||||| || ||||| |||| || |||||    
T  13358047 ctcagggggaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaac 13357966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 18091428 - 18091485
Alignment:
Q  71 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 128  Q
    ||||||| ||| ||||||||||||||||||||| |||  || ||||||||||||||||    
T  18091428 aacaacgtttgaccagtgcgcatgcctctacgcacgaggcgaattagtcgcccacctt 18091485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 36662408 - 36662504
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| ||||||||||| ||||||| |||||  ||| |||||||||||||||||||||   ||| ||||||||||| |||| |||  |||||| |||||    
T  36662408 aatatcgggttcgattttcagggg-aacaatacttagccagtgcgcatgcctctacgtatgaaccggattagtcgtccacttttaatggatcggaaac 36662504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 68200 - 68108
Alignment:
Q  51 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||| ||| | |||  ||||||| |||  |||||||| ||| || |||||    
T  68200 cgggttcgattctcaggaggaacaacgtttggccagtatgcatgcctttacacacgagccggattaatcgttcacctttgatgggtcggaaac 68108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 7673745 - 7673673
Alignment:
Q  65 agggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||  ||||||  ||||||| |||| |||||||    
T  7673745 agggggaacaacgtttggctagtgtgcatgcctctacgcacgagccggatttttcgcccatctttagtggatc 7673673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 24938644 - 24938572
Alignment:
Q  71 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||| ||||| || |||||||||||||||||  ||| ||||||||||  ||||||||| |||||| |||||    
T  24938644 aacaacacttggtcaatgcgcatgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaac 24938572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 34613895 - 34613831
Alignment:
Q  36 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 100  Q
    ||||||||  |||| |||||||||||| |||| |||||||||  |||||||| ||||||||||||    
T  34613895 gtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtacgcatgcctcta 34613831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 35496355 - 35496271
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||| ||| |||| || |||||| ||||| |||||||||||||||||||  |||   |||||| ||||||||||||| ||||||    
T  35496355 ggttcaattttcagaggaaacaacacttggtcagtgcgcatgcctctacgtacgagctggattaatcgcccacctttgatggatc 35496271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 22958782 - 22958865
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatca 138  Q
    ||||||| |||| |||||||| |||||| ||||| ||||| ||||| ||  ||  ||||||||||| ||||||||||| |||||    
T  22958782 ttcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacctttggtagatca 22958865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 3567907 - 3567964
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||| ||||| ||| |||||||||||| |||| ||||||| ||| |||||||||    
T  3567907 aataccggattcgaatctaagggggaacaacacttgaccagtgcacatacctctacgc 3567964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 10699001 - 10698937
Alignment:
Q  79 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||||||||||  ||| | ||||||||| ||||||  ||||| ||| |||||    
T  10699001 ttggccagtgcgcatgcctctacgtacgagttggattagtcacccaccaatggtgaatcggaaac 10698937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 22212606 - 22212534
Alignment:
Q  63 tcagggggaacaacgcttgg-ccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||| |||||||||||| | ||||| ||||||| ||||||| ||   |||||||||||| ||||||||||||    
T  22212606 tcaggtggaacaacgctttgaccagtacgcatgcttctacgcacgggccggattagtcgctcacctttggtgg 22212534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 22276613 - 22276545
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtg 88  Q
    ||||| ||||||||| ||| || ||||||||||||||| ||||  ||| |||||||| ||||| |||||    
T  22276613 agctccttccaaggacgtacccagaaaataccgggttctattcctaggaggaacaacacttggtcagtg 22276545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 8e-31; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 7866555 - 7866683
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| |||   |||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  7866555 agctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 7866654  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
    ||||||||||||||| | |||||| ||||    
T  7866655 gcccacctttggtgggttagaaaccagtg 7866683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 9812846 - 9812969
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||  ||| |||||||||||||||||||| |||||| |||||||  ||| ||||||||||    
T  9812846 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtc 9812945  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| ||||||||    
T  9812946 gcccacctttggtgggtcagaaac 9812969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 12766105 - 12766228
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||  ||| | ||||||||    
T  12766105 agctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctctacgcatgaaccagattagtc 12766204  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| ||||||||    
T  12766205 gcccacctttggtgggtcagaaac 12766228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 9805004 - 9805101
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||| ||||||||||||| || |||||    
T  9805004 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaac 9805101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 12081879 - 12081995
Alignment:
Q  17 agaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatta 116  Q
    ||||| || ||| ||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  || ||||    
T  12081879 agaagttccttcaaaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaatta 12081978  T
Q  117 gtcgcccacctttggtg 133  Q
    |||| ||||||||||||    
T  12081979 gtcgtccacctttggtg 12081995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 12704988 - 12705111
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||  ||| ||||||||||||| |||||| |||||| |||||||  ||| ||||||||||    
T  12704988 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtc 12705087  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| ||||||||    
T  12705088 gcccacctttggtgggtcagaaac 12705111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 42086301 - 42086424
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| |||   ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||  ||||||||||    
T  42086301 agctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtc 42086400  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||||||| || |||||    
T  42086401 gtccacctttggtgggtcggaaac 42086424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 38897825 - 38897724
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaacta 145  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||| ||||| |    
T  38897825 aataccgggttcgatttccagggg-aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaaacca 38897727  T
Q  146 gtg 148  Q
    |||    
T  38897726 gtg 38897724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 4016392 - 4016260
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||||||||||||| ||| | |  ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||  ||||||    
T  4016392 aagaagctcattccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctacacacgagccggatt 4016293  T
Q  116 agtcgcccacctttggtggatcagaaactagtg 148  Q
    ||| || |||| ||||||| || ||||| ||||    
T  4016292 agttgctcaccattggtgggtcggaaaccagtg 4016260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 20525812 - 20525935
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||||||||||||  |||| |||||||||||| |||| |||||||| ||| ||||||||||||||||||||||  ||  ||||||||||    
T  20525812 agctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtc 20525911  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| |||||||||| |||||    
T  20525912 gtccaccattggtggatcggaaac 20525935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 42291618 - 42291515
Alignment:
Q  40 ccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcag 139  Q
    ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||| |    
T  42291618 ccggagaataccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcgg 42291519  T
Q  140 aaac 143  Q
    ||||    
T  42291518 aaac 42291515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 3654045 - 3653930
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||||  |  | |||||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  3654045 agctctttccaaggacgtacccggagaataccgggttcgattccta--gagaacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtc 3653948  T
Q  120 gcccacctttggtggatc 137  Q
    | ||||||||||||||||    
T  3653947 gtccacctttggtggatc 3653930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 14974457 - 14974343
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||| ||||| ||||||||| |||| ||||||||||||| | ||||||||||  ||||||||||| |||||||||||||  ||  ||||||||||    
T  14974457 agctcattctaaggacgtatccggagaatatcgggttcgattctaaaggggaacaacatttggccagtgcacatgcctctacgcatgagccggattagtc 14974358  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||||||||    
T  14974357 gtccacctttggtgg 14974343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 19572698 - 19572812
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  19572698 agctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 19572797  T
Q  120 gcccacctttggtgg 134  Q
    |  |||| |||||||    
T  19572798 gttcaccattggtgg 19572812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 23383657 - 23383755
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||   |||||||||| ||||||||||||| || ||||||    
T  23383657 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaact 23383755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 1538405 - 1538528
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||| |||| |||| |||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||| ||    
T  1538405 agctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatc 1538504  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  1538505 gtccaccattggtgggtcggaaac 1538528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 1898975 - 1899050
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgc 95  Q
    ||||| ||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1898975 agctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgc 1899050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 7308497 - 7308374
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||||  |   |||| |||||||||||| ||||||||||||||||||| |||||| |||||||||||||  ||  ||||||||||    
T  7308497 agctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtc 7308398  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||| ||||||| ||||    
T  7308397 gctcacctttgatggatcaaaaac 7308374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 8513493 - 8513616
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||  ||||| ||||| ||||||||||||| ||||||||||||| |||  | ||||||||    
T  8513493 agctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagccagattagtc 8513592  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||||||| || |||||    
T  8513593 gtccacctttggtgggtcggaaac 8513616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 25417316 - 25417217
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||  |||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||  ||||||||||    
T  25417316 agctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtc 25417217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 30995121 - 30995216
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaa 141  Q
    |||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||| |||  |||||||||||| || ||||||||||| ||||    
T  30995121 aataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttggtggataagaa 30995216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 5732053 - 5731971
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 102  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  5732053 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacg 5731971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 21149734 - 21149824
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggat 136  Q
    |||||| ||||||||| ||||||||||||||| ||| |||||||||||| |||||||| ||| | |||||||||||||||| |||||||||    
T  21149734 aataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatgactctacgcacgagttggattagtcgcccaccattggtggat 21149824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 37263241 - 37263337
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||  ||||||||||| ||||||||  |||||| |||||    
T  37263241 aatatcgggttcgattctcagggg-aacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccacctttattggatcggaaac 37263337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 35403645 - 35403557
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaa 108  Q
    ||||| ||||||||| |||  ||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||    
T  35403645 agctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgcatgtctctacgcacgaa 35403557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 38369700 - 38369783
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||  ||||||||||    
T  38369700 aatatcgggttcgattctcagggg-aacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtaacccacctttg 38369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 18262725 - 18262634
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||| | |||  |||||||||||||||||| || ||||||    
T  18262725 aataccgggttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcgcccacctctgatggatc 18262634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 28857102 - 28857185
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| | | ||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  28857102 agctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgc 28857185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 39728361 - 39728471
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||| | ||| ||||  |||||| ||||||||| |||| || |||||| ||||||||||| |||||||||||||||||| ||| |||||||    
T  39728361 agctctttccaagaacgtacccggggaataccaggttcgattatcagaggaaacaacacttggccagtgtgcatgcctctacgctcgagtcgaattagtc 39728460  T
Q  120 gcccacctttg 130  Q
    || ||||||||    
T  39728461 gctcacctttg 39728471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 18136413 - 18136332
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 101  Q
    ||||| |||||| || ||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||    
T  18136413 agctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctctac 18136332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 14588741 - 14588637
Alignment:
Q  29 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctt 128  Q
    |||||| ||||| ||  |||| ||||||||||| ||||| |||| |||||||| |||||||||||||||||||||  ||  ||||||||||| |||||||    
T  14588741 caaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctt 14588642  T
Q  129 tggtg 133  Q
    |||||    
T  14588641 tggtg 14588637  T

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Target: chr5; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 13664234 - 13664317
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| |||||  |  |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  13664234 agctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgc 13664317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 39099868 - 39099789
Alignment:
Q  64 cagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||  ||||||||||||||||||||||||| || |||||    
T  39099868 cagggggaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaac 39099789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 5079305 - 5079419
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||| | |||||||   ||||||||| | ||||  ||||||||||| ||||||| || ||||||||| ||||||| |||  ||||||||||    
T  5079305 agctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgcgcatgcttctacgcacgagccggattagtc 5079404  T
Q  120 gcccacctttggtgg 134  Q
    |||||||||||||||    
T  5079405 gcccacctttggtgg 5079419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 20682706 - 20682636
Alignment:
Q  64 cagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||| |||||||| ||||    
T  20682706 cagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgg 20682636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 35813135 - 35813021
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||||||||||||| ||| |||   |||||||||||||||||  ||||| || || ||||| |||||||||||| |||||| |  || |||||||    
T  35813135 aagaagctcattccaaggacgtacccgaggaataccgggttcgattcctaggggaaataatgcttgaccagtgcgcatgtctctacacatgagtcggatt 35813036  T
Q  116 agtcgcccacctttg 130  Q
    ||||| |||||||||    
T  35813035 agtcgtccacctttg 35813021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 40117424 - 40117506
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||  ||  ||||||| |||  |||||||||||||||    
T  40117424 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatc 40117506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 20228717 - 20228814
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||| |||||||||||  | ||| ||||| ||||||| |||||| |||||||||| | ||| || ||||||||||||| ||||||||||||||||||    
T  20228717 aatacagggttcgattcctaagggaaacaatgcttggctagtgcgtatgcctctacacacgagtcagattagtcgcccatctttggtggatcagaaac 20228814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 24463986 - 24463910
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    ||||||||| ||| || |||||||| |||||||||||||||||||||| || |||  ||||||||||||||||||||    
T  24463986 ggttcgattttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccaccttt 24463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 26077115 - 26077198
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||| ||||  ||  |||||  |||||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  26077115 agctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgcacatgcctctacgc 26077198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 11845934 - 11845852
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 102  Q
    ||||| ||||||||| ||| |||  ||||| |||||||||||   ||||||||||||| ||||||||||||||||||||||||    
T  11845934 agctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacg 11845852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 23247484 - 23247374
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| | ||  |||| |||||||||||| |||| |||||||||||||  ||||  |||||||||||||| |||  | ||||||||    
T  23247484 agctcattccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagattagtc 23247385  T
Q  120 gcccacctttg 130  Q
    | |||||||||    
T  23247384 gtccacctttg 23247374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 41800977 - 41801051
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    |||| ||||||||||||||| ||||||||||||||| ||| |||||||| |||||||| |||  |||||||||||    
T  41800977 aatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcg 41801051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 20255343 - 20255456
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||| ||||| |||  |||  ||||||||| |||   ||||||  ||||||| |||| |||||||||||||||||||||  || |||||||||||    
T  20255343 agctcattctaaggacgtactcggggaataccggggtcgtaactcaggacgaacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtc 20255442  T
Q  120 gcccacctttggtg 133  Q
    | ||||||||||||    
T  20255443 gtccacctttggtg 20255456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 43399145 - 43399214
Alignment:
Q  63 tcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 132  Q
    |||||||||| |||||||||||||||||||||||||||||| |||   |||||||||| |||| ||||||    
T  43399145 tcagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggt 43399214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 14152024 - 14152104
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 100  Q
    ||||| |||||| |||||| | ||  ||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  14152024 agctccttccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttcta 14152104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 40060296 - 40060344
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 94  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  40060296 aataccgggttcgattttcagggggaacaacacttggccagtgcgcatg 40060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 41163592 - 41163469
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||| | ||| ||||  ||||||||||||||||| |||||| ||||||| ||||||||||| |||| ||||||||  ||   |||||||||    
T  41163592 agctccttccaagaacgtacccggggaataccgggttcgattcccagggg-aacaacgtttggccagtgcacatgtctctacgcatgagctggattagtc 41163494  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    | |||||||| |||| || ||||||    
T  41163493 gtccaccttttgtgggtcggaaact 41163469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 2485171 - 2485293
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| |||| | |  ||||| |||||||||||  ||||| |||||| || |||| |||||||||||||||||   || |||||||||||    
T  2485171 agctcattccaaggacgtattcagggaatactgggttcgattcctagggg-aacaaccctgggcctgtgcgcatgcctctacgtatgagtcggattagtc 2485269  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||| ||| || |||||    
T  2485270 gctcacctttgatgggtcggaaac 2485293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 14728081 - 14728180
Alignment:
Q  45 aaataccgggttcgattctcaggggga-acaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||| ||||||| ||||||||  ||||||||||| ||||||||||||||||||||  ||  ||||||||| || |||||||| ||| || |||||    
T  14728081 aaataccggattcgattttcagggggggacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaac 14728180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 15034049 - 15034172
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||||||| ||||  |||||||||||| |||  || ||| |||||| ||||| ||||| ||||||||||||||  ||  | |||||||     
T  15034049 agctccttccaaggatgtacccggggaataccgggttcaatttccatgggaaacaacacttggtcagtgtgcatgcctctacgcatgagcctgattagtt 15034148  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||| |||||| |||||    
T  15034149 gtccacctttgatggatcggaaac 15034172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 28862799 - 28862882
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| |||||| || |||| |||  |||| | ||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  28862799 agctccttccaaagacgtattcggggaatatcaggttcgattctcaggcggaacaacgcttggccaatgcacatgcctctacgc 28862882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 24875319 - 24875429
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    |||| |||||||||| ||| ||  | |||| | ||||||||||| |||| |||||||| ||| |||||||||||| |||||||| |||  ||||||| ||    
T  24875319 agcttattccaaggacgtacccaaagaatatcaggttcgattcttagggagaacaacgtttgaccagtgcgcatgtctctacgcacgagccggattaatc 24875418  T
Q  120 gcccacctttg 130  Q
    | |||||||||    
T  24875419 gtccacctttg 24875429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 30349559 - 30349633
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 100  Q
    ||||||||| ||||||||  ||||||||||| ||||   ||||||||||| | ||||||||||||||||||||||    
T  30349559 ttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctcta 30349633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 42861351 - 42861237
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    |||||||||||||||  |||||||  |||| ||||||| |||  |  ||| |||||| ||||||||||||||||||||||||||  ||  ||||||| ||    
T  42861351 agctcattccaaggacatatccggggaatatcgggttcaatttcccagggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatc 42861252  T
Q  120 gcccacctttggtgg 134  Q
    | ||||| |||||||    
T  42861251 gtccaccattggtgg 42861237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 9168337 - 9168272
Alignment:
Q  69 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||||||||||||||||||| |||||||||  ||  ||||||||||| |||||||| ||||    
T  9168337 ggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgg 9168272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 19839325 - 19839410
Alignment:
Q  44 aaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    |||||||||| ||| ||| ||||| |||||||||||||  ||||||||||||||||||   ||| || ||||||||||| ||||||    
T  19839325 aaaataccggattcaattttcaggaggaacaacgcttgatcagtgcgcatgcctctacatacgagtcagattagtcgcctaccttt 19839410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 22295215 - 22295312
Alignment:
Q  45 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaa 142  Q
    ||||| |||||| |||||| |||||||| ||  ||||||||||||||||||||||||||  || | |||||||||||  | ||||||| | |||||||    
T  22295215 aaatatcgggtttgattctgagggggaataatacttggccagtgcgcatgcctctacgcatgagttggattagtcgcttatctttggtaggtcagaaa 22295312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 18294570 - 18294494
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||||| |||||||||| ||||||| |  ||| ||||||| ||||||| ||||||||| || |||||    
T  18294570 ggggaacaacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaac 18294494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 16755035 - 16755109
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 94  Q
    ||||| |||||| || ||||||||  ||||| |||||||||| ||||| | |||||| |||||||||||||||||    
T  16755035 agctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgcgcatg 16755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 6764531 - 6764458
Alignment:
Q  79 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactagtgaaaa 152  Q
    ||||| ||||||||||||||||||| |||  ||||||||||||| | ||||| ||| || |||||| |||||||    
T  6764531 ttggctagtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaactggtgaaaa 6764458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 20692913 - 20693030
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||| ||||  ||||||||||| |||||  || || ||||||||||||||||| | |||||||||  ||  || || ||||||| | ||||    
T  20692913 ttccaaggacgtacccggggaataccgggtttgattcctagaggaaacaacgcttggccagtacacatgcctctgtgcatgattcagattagttgtccac 20693012  T
Q  126 ctttggtggatcagaaac 143  Q
    ||||||||| || |||||    
T  20693013 ctttggtgggtcggaaac 20693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 21487625 - 21487697
Alignment:
Q  54 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    |||||||| ||||| ||||||||| ||||| |||||||||||||||   | |||  ||||||||||||||||||||    
T  21487625 gttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccaccttt 21487697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 35006842 - 35006785
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||||||| ||||  || ||||||||||||||| ||||| ||||||||||||||    
T  35006842 aataccgggttccattccgagagggaacaacgcttggtcagtgtgcatgcctctacgc 35006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 1826864 - 1826932
Alignment:
Q  53 ggttcgattctcagggggaa-caacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    ||||||||||||||| |||| ||||||||||||| ||| |||||||||  || |||||| |||||||||    
T  1826864 ggttcgattctcaggaggaaacaacgcttggccactgcacatgcctctgagcacgaatcagattagtcg 1826932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 20590020 - 20590056
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20590020 ggggaacaacgcttggccagtgcgcatgactctacgc 20590056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 21375373 - 21375453
Alignment:
Q  68 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactagtg 148  Q
    |||||||||  ||| ||||||||||||| |||||||  || |||||||||||| ||| ||||| |||||| ||||| ||||    
T  21375373 gggaacaacatttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtg 21375453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 25467419 - 25467467
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||| ||||| ||||||||| ||||||||| |||||||||||||||    
T  25467419 ttcgattttcaggaggaacaacgattggccagtacgcatgcctctacgc 25467467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 7336644 - 7336710
Alignment:
Q  70 gaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggat 136  Q
    |||||||||||   |||||||||||||||||||| |||  ||||||| ||| | |||||||||||||    
T  7336644 gaacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctacctttggtggat 7336710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 20516498 - 20516460
Alignment:
Q  56 tcgattctcagggggaacaacgcttggccagtgcgcatg 94  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  20516498 tcgatttttagggggaacaacgcttggccagtgcgcatg 20516460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 18045629 - 18045694
Alignment:
Q  36 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 101  Q
    ||||||||  ||||| ||||||||||| ||||||||||||| |||||   || |||||||||||||    
T  18045629 gtatccggggaatactgggttcgattcccagggggaacaacccttggttggtacgcatgcctctac 18045694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 20705563 - 20705620
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||| ||| ||| ||| |||||| |||||||| |||| ||||||||||||||||||||    
T  20705563 aatatcggattcaattttcagggagaacaacgtttggtcagtgcgcatgcctctacgc 20705620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 38297071 - 38297014
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||||||| |||| || ||||||||||| |||| |||||||||| | |||||||    
T  38297071 aataccgggttcaattcccaaggggaacaacgtttggtcagtgcgcattcttctacgc 38297014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 5253356 - 5253233
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||| ||    
T  5253356 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatc 5253257  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| || |||||    
T  5253256 gcccacctttggtgggtcggaaac 5253233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 3588073 - 3587954
Alignment:
Q  25 attccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccca 124  Q
    ||||||| || ||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||| |||||||||  ||| ||||||||||| | |    
T  3588073 attccaaagacgtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctctacgcatgaaccggattagtcgtcaa 3587974  T
Q  125 cctttggtggatcagaaact 144  Q
    |||||| |||||| ||||||    
T  3587973 cctttgatggatcggaaact 3587954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 6606230 - 6606107
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||  ||  ||||||||||    
T  6606230 agctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtc 6606131  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  6606130 gtccaccattggtgggtcggaaac 6606107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 8612107 - 8611984
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||||||||||||||||  ||| ||||||||||||| |||||| |||||| |||||||  ||| ||||||||||    
T  8612107 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtc 8612008  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| ||||||||    
T  8612007 gcccacctttggtgggtcagaaac 8611984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 21898625 - 21898748
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  21898625 agctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 21898724  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |  ||||||| |||| || |||||    
T  21898725 gttcacctttagtgggtcggaaac 21898748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 3601087 - 3601184
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||  ||||||||||| ||||||||||||| || |||||    
T  3601087 aataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaac 3601184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 12606407 - 12606520
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||| | ||||||||  |||||| | |||||||  |||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||    
T  12606407 agctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtc 12606506  T
Q  120 gcccacctttggtg 133  Q
    ||||||||||||||    
T  12606507 gcccacctttggtg 12606520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 30788984 - 30788863
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||||||||||||  |||| |||||| |||||||| ||  ||||||| |||||||||||||||||||||| || |||  ||||||||||    
T  30788984 agctccttccaaggatgtatccggggaatatcgggtttgattctcatgg--aacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtc 30788887  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| || |||||    
T  30788886 gcccacctttggtgggtcggaaac 30788863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 10311602 - 10311488
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||| | ||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||| |  ||||||||    
T  10311602 agctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctctacgcacgagttagattagtc 10311503  T
Q  120 gcccacctttggtgg 134  Q
    || |||| |||||||    
T  10311502 gctcaccattggtgg 10311488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 2271434 - 2271308
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||||||| |  |||||||||| ||||||||||||| |||||||| |||  ||||||||||    
T  2271434 agctccttccaaggacgtattcggggaataccgggttcgattctcagag--aacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtc 2271337  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
    | ||||||||| ||| |||||||| ||||    
T  2271336 gtccacctttgatgggtcagaaaccagtg 2271308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 8932644 - 8932761
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||||||||||||  |||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||  ||||||| || |||||    
T  8932644 ttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccac 8932743  T
Q  126 ctttggtggatcagaaac 143  Q
    ||||| ||| || |||||    
T  8932744 ctttgatgggtcggaaac 8932761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 8944110 - 8944227
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||||||||||||  |||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||  ||  ||||||| || |||||    
T  8944110 ttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccac 8944209  T
Q  126 ctttggtggatcagaaac 143  Q
    ||||| ||| || |||||    
T  8944210 ctttgatgggtcggaaac 8944227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 12635787 - 12635914
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    |||| |||| ||||||||| ||||||||  |||||| |||| ||||| |||||| ||||||||||||| ||||||||||||||||||| | |  ||||||    
T  12635787 aagatgctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggatt 12635886  T
Q  116 agtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||  ||||||| || |||||    
T  12635887 agtcgcccactattggtgggtcggaaac 12635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 19089475 - 19089598
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    |||||||| |||||| |||||||   |||||| |||| ||||| ||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||    
T  19089475 agctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtc 19089574  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | | ||||||||||| || |||||    
T  19089575 gtctacctttggtgggtcggaaac 19089598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 9633708 - 9633635
Alignment:
Q  70 gaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| || |||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 9633635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 29444871 - 29444770
Alignment:
Q  47 ataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaactag 146  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||  ||  ||||||||| | ||| ||||||||| || ||||||||    
T  29444871 ataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactag 29444772  T
Q  147 tg 148  Q
    ||    
T  29444771 tg 29444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 13036137 - 13036054
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| |||| |||  |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  13036137 agctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgc 13036054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 9179869 - 9179747
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| || |  ||||||||||||||||| ||||||||||||| |||| |||||  |||| |||||||||  ||   |||||||||    
T  9179869 agctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggattagtc 9179770  T
Q  120 gcccacctttggtggatcagaaa 142  Q
    | |||||||||||||||| ||||    
T  9179769 gtccacctttggtggatcggaaa 9179747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 11142576 - 11142694
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    |||||||||||||||||||  || |||| |||||||| ||||||||| ||| || ||||||| ||| |||||||||||||||||||||  || || ||||    
T  11142576 aagaagctcattccaaggacatacccgggaaataccgagttcgattcgcagtggaaacaacgtttgaccagtgcgcatgcctctacgcatgagtcagatt 11142675  T
Q  116 agtcgcccacctttggtgg 134  Q
    ||| | ||| |||||||||    
T  11142676 agttgtccaactttggtgg 11142694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 13468910 - 13469024
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  |||||| ||||| ||||  ||||||||||||| |||| |||||| ||||||||||||| |||  | ||||||||    
T  13468910 agctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagccagattagtc 13469009  T
Q  120 gcccacctttggtgg 134  Q
    ||||||| |||||||    
T  13469010 gcccaccattggtgg 13469024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 5029825 - 5029918
Alignment:
Q  51 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 144  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||  || | |||||||||||||| ||||| ||| || ||||||    
T  5029825 cgggttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaact 5029918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 14107491 - 14107387
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || |||| |||  ||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||||  ||  ||||||||||    
T  14107491 agctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatgagccggattagtc 14107392  T
Q  120 gccca 124  Q
    |||||    
T  14107391 gccca 14107387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 34954752 - 34954629
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||  |||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||||  ||  | ||||||||    
T  34954752 agctccttccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtc 34954653  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||| ||| || |||||    
T  34954652 gtccacctttgatgggtcggaaac 34954629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 9366556 - 9366445
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||||||||||   ||  |||| | ||||||||| | |||||||| |||||||||||||||||||||||||||||| |||  |||||||| |    
T  9366556 agctccttccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagac 9366457  T
Q  120 gcccacctttggt 132  Q
    | |||||||||||    
T  9366456 g-ccacctttggt 9366445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 33859427 - 33859369
Alignment:
Q  45 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||    
T  33859427 aaataccgggttcgatttttagggggaacaacgtttgcccagtgcgcatgcctctacgc 33859369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 9147273 - 9147361
Alignment:
Q  15 gaagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||| ||||||||||||||| ||| | ||  |||| |||||||||||| |||||||||| || |||| ||||||| |||||||||||||    
T  9147273 gaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccagggggaacgacacttgaccagtgcacatgcctctacgc 9147361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 29333271 - 29333160
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| || |  ||||||||||||||||  |||||| ||||||| |||||||||||||||||||||||||  ||  || || ||||    
T  29333271 agctccttccaaggacgtacccagggaataccgggttcgatttccagggg-aacaacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtc 29333173  T
Q  120 gcccacctttggt 132  Q
    | |||||||||||    
T  29333172 gtccacctttggt 29333160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 24671999 - 24671916
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| || |||||| ||||| ||| |||||||||||| |||| ||| ||||||||| |||| |||||| ||||||||||||||    
T  24671999 agctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctctacgc 24671916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 8888910 - 8888976
Alignment:
Q  71 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||||| ||||||||||||||| |||||||||  || |||||||||||| ||||||||| ||||||    
T  8888910 aacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttgatggatc 8888976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 13391290 - 13391367
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccca 124  Q
    |||| ||| ||||||| ||||||| ||||| | ||||||||||||||||||||||||| |||  |||||||||||||||    
T  13391290 aatatcggattcgattttcagggg-aacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgccca 13391367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 13627257 - 13627336
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggt 132  Q
    |||| ||||||||||  ||| ||||||||| |||| ||||||||||||||  | ||||| |||||||||| |||||||||    
T  13627257 ggtttgattctcaggaagaagaacgcttggtcagttcgcatgcctctacgtacaaatcgaattagtcgcctacctttggt 13627336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 15643961 - 15643853
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||||| || || || |||||||||||| |||||| |||||| || ||||| |||||||    ||||||  || |||||||||||    
T  15643961 agctcattccaaggacgtatctgggaa-taacgggttcgattcacagggg-aacaacactaggccaatgcgcat----ctacgcatgagtcggattagtc 15643868  T
Q  120 gcccacctttggtgg 134  Q
    |||||||||| ||||    
T  15643867 gcccacctttagtgg 15643853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 17114981 - 17114920
Alignment:
Q  69 ggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    ||||||||||||||||| ||  |||||||||||||  ||  |||||||||||||||||||||    
T  17114981 ggaacaacgcttggccaatggacatgcctctacgcatgagccggattagtcgcccacctttg 17114920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 30410456 - 30410505
Alignment:
Q  54 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||||||||| |||||||| |||  |||||||||||||||||||||    
T  30410456 gttcgattctcaggaggaacaacacttaaccagtgcgcatgcctctacgc 30410505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 31129193 - 31129237
Alignment:
Q  59 attctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||    
T  31129193 attcacagggggagcaacgcttggctagtgcgcatgcctctacgc 31129237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 32157252 - 32157177
Alignment:
Q  68 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||| |||| ||||||||||| |||||||||  ||  | ||||||||  ||| ||||||||||||||||||    
T  32157252 gggaacaacacttgaccagtgcgcatacctctacgcatgagccagattagtcatccatctttggtggatcagaaac 32157177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 19230665 - 19230592
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    |||||||| ||||||| ||| ||| |||||||||||| ||||  |||||||||||||| |||  |||||||||||    
T  19230665 aataccggattcgattttcaaggg-aacaacgcttggtcagtatgcatgcctctacgcacgagccggattagtcg 19230592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 2105213 - 2105156
Alignment:
Q  30 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagt 87  Q
    ||||| ||| |||| |||||||||||||||||   ||||| |||||||||||||||||    
T  2105213 aaggacgtacccgggaaataccgggttcgatttctaggggaaacaacgcttggccagt 2105156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 10312745 - 10312801
Alignment:
Q  45 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 101  Q
    |||||||||||||||||| ||||| ||| |||| |||| || || ||||||||||||    
T  10312745 aaataccgggttcgattcccagggagaataacgtttgggcaatgtgcatgcctctac 10312801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 33940014 - 33940098
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    ||||| ||||| |||||||||| |||||||  |||  ||| ||||||||||||||| | |||  ||||||||||| ||| |||||    
T  33940014 aatactgggtttgattctcaggaggaacaatacttaaccattgcgcatgcctctacacacgagccggattagtcgtccatctttg 33940098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 33498963 - 33498856
Alignment:
Q  30 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    ||||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||  ||||||||||| ||||||||    
T  33498963 aaggatgtacctggaaaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 33498864  T
Q  130 ggtggatc 137  Q
    | ||||||    
T  33498863 gatggatc 33498856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 43959954 - 43959832
Alignment:
Q  21 gctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    |||| |||||| || ||| ||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  43959954 gctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 43959855  T
Q  121 cccacctttggtggatcagaaac 143  Q
    ||||||||| ||||||| |||||    
T  43959854 cccacctttagtggatcggaaac 43959832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 37339799 - 37339908
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcaggggga-acaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgccca 124  Q
    ||||||||||||| ||||  ||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||| |||  |||||||||||||||    
T  37339799 ttccaaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgccca 37339898  T
Q  125 cctttggtgg 134  Q
    ||||||||||    
T  37339899 cctttggtgg 37339908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 17642138 - 17642014
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||| ||| ||| || | |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||    
T  17642138 agctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 17642039  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    | ||||||||||||| || ||||||    
T  17642038 gtccacctttggtgggtcggaaact 17642014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 9853411 - 9853289
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||||||| |||||||||||||||||||||||  ||||| ||||||| ||  ||||||||||||||||||| | |||| | ||||| ||    
T  9853411 agctccttccaaggatgtacccggaaaataccgggttcgattcctaggggaaacaacgttttaccagtgcgcatgcctctacacacgaaccagattaatc 9853312  T
Q  120 gcccacctttggtggatcagaaa 142  Q
    | ||||||||||||| |||||||    
T  9853311 gtccacctttggtgggtcagaaa 9853289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 11398022 - 11397909
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||||||||||||| |||||||||||||||||  ||||| ||||||| ||||||| |||| ||||||||||||  || |||||||||||    
T  11398022 agctccttccaaggatgtatccggagaataccgggttcgattccgagggg-aacaacgtttggccaatgcgtatgcctctacgcatgagtcggattagtc 11397924  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||||||||    
T  11397923 gtccacctttggtgg 11397909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 10336490 - 10336607
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || ||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||  ||||||| ||    
T  10336490 agctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattaatc 10336589  T
Q  120 gcccacctttggtggatc 137  Q
    | ||||||||| ||||||    
T  10336590 gtccacctttgatggatc 10336607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 18649486 - 18649370
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||| ||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||  |||  | ||||| ||    
T  18649486 agctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatc 18649387  T
Q  120 gcccacctttggtggat 136  Q
    |||||||||| ||||||    
T  18649386 gcccacctttagtggat 18649370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 18915847 - 18915955
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||  |||||||||||| |||    
T  18915847 ttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgctcac 18915946  T
Q  126 ctttggtgg 134  Q
    | |||||||    
T  18915947 cattggtgg 18915955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 5855496 - 5855619
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  5855496 agctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtc 5855595  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |  ||||||| |||| || |||||    
T  5855596 gttcacctttagtgggtcggaaac 5855619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 8763965 - 8764088
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  |||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||    
T  8763965 agctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 8764064  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  8764065 gtccaccgttggtgggtcggaaac 8764088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 14254400 - 14254279
Alignment:
Q  22 ctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 121  Q
    ||||||||||||| |||| |||  ||||||| |||||||| ||||||||||||||||||||||||| ||||||||| |||||  ||  |||||||||||     
T  14254400 ctcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgt 14254301  T
Q  122 ccacctttggtggatcagaaac 143  Q
    ||||||||| ||| || |||||    
T  14254300 ccacctttgatgggtcggaaac 14254279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 16956440 - 16956568
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||| ||||| |||||||||| ||||||| ||| ||||||||||||||||||||| |||  ||||||||||    
T  16956440 agctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccggattagtc 16956539  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
     | |||||||||||| || ||||| ||||    
T  16956540 actcacctttggtgggtcggaaaccagtg 16956568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 33418249 - 33418137
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || ||| ||||| |||||||| ||||||||  |||||| ||||||||||||||||||||||||||||| || |||  ||||||||||    
T  33418249 agctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctctatgcacgagccggattagtc 33418150  T
Q  120 gcccacctttggt 132  Q
    | |||||||||||    
T  33418149 gtccacctttggt 33418137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 34334429 - 34334353
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcc 96  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  34334429 agctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcc 34334353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 2567250 - 2567373
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||| |||| |||||||||||||||| || |||  ||||||||||||||||||||||||||||||| | ||| || |||||| |    
T  2567250 agctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctctactcacgagtcagattagcc 2567349  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||| ||||||||| || |||||    
T  2567350 gtccatctttggtgggtcggaaac 2567373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 17092615 - 17092488
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| || || ||| |||| ||| ||||| || |||||||| ||||||| ||||||| |||||||||| | |||||||||||| |||  ||||||    
T  17092615 aagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggatt 17092516  T
Q  116 agtcgcccacctttggtggatcagaaac 143  Q
    ||||| ||||||||||| ||||||||||    
T  17092515 agtcgtccacctttggtagatcagaaac 17092488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 41663990 - 41663867
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||| ||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||  ||   |||||||||    
T  41663990 agctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtc 41663891  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  41663890 gtccaccattggtgggtcggaaac 41663867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 50371968 - 50371845
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||| ||||||||||| | |||||| || |||||||| |||||  |||||||||||||||||| ||||||| ||||||| | |  ||||||||||    
T  50371968 agctccttctaaggatgtatctgaaaaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtc 50371869  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||| |||||||||||| |||||    
T  50371868 gcccatctttggtggatcggaaac 50371845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 50503495 - 50503372
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| ||||||||  |||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||  |||||| |||    
T  50503495 agctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtc 50503396  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |||||||  |||||| || |||||    
T  50503395 gcccaccaatggtgggtcggaaac 50503372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 12036882 - 12036756
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||| ||| |  || ||||| ||||| |||||  ||||||||||| ||||||||||||||||||||||||||| |||  | ||||    
T  12036882 aagaagctccttccaaggacgtacctagagaatactgggtttgattcctagggggaacaatgcttggccagtgcgcatgcctctacgcacgagccagatt 12036783  T
Q  116 agtcgcccacctttggtggatcagaaa 142  Q
    | ||| |||||||||||||||| ||||    
T  12036782 aatcgtccacctttggtggatcggaaa 12036756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 2981065 - 2980965
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||| ||| ||||||||  ||||| ||||||||||| ||| ||||||||| ||||||||||| |||||||||||||| ||| |||||||||||    
T  2981065 agctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgagtcggattagtc 2980966  T
Q  120 g 120  Q
    |    
T  2980965 g 2980965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 15238214 - 15238126
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||| |||||||||||| |||||||| ||||||||||||| || |||||||||||||| ||||||  ||||||||| ||||||||||||    
T  15238214 aatatcgggttcgattcccagggggagcaacgcttggccaatgagcatgcctctacgcacgaatcatattagtcgctcacctttggtgg 15238126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 34719750 - 34719874
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||  ||||| ||||||||||| ||  ||||| |||||||| ||||||||||||||||||||| ||| || ||||||||    
T  34719750 agctccttccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagtcagattagtc 34719849  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    || |||||||||||| || ||||||    
T  34719850 gctcacctttggtgggtcggaaact 34719874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 49078088 - 49078188
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||| ||||| ||||||||  ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  49078088 agctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 49078187  T
Q  120 g 120  Q
    |    
T  49078188 g 49078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 30927861 - 30927738
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | || ||||| |||||||||||  ||| |||||||||||||||||| || ||||||||||||||  ||  ||||||||||    
T  30927861 agctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatgagccggattagtc 30927762  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | |||| |||||||| ||||||||    
T  30927761 gtccacttttggtgggtcagaaac 30927738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 31576681 - 31576598
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||| ||||  |||||||||||    
T  31576681 agctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaatgcgtgtgcctctacgc 31576598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 32142979 - 32142857
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| || | || |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||  ||  || |||||||    
T  32142979 agctcattccaaggacgtaccctggaa-taccgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtc 32142881  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||| ||| || |||||    
T  32142880 gctcacctttgatgggtcggaaac 32142857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 45362016 - 45361933
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||| || |  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  45362016 agctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgc 45361933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 15465940 - 15466062
Alignment:
Q  21 gctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    |||| ||||||||| ||||  ||  |||||| |||||||||  ||||||||||||||||||| |||||| ||||||||||||| ||| || |||| ||||    
T  15465940 gctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgagtctgattggtcg 15466039  T
Q  121 cccacctttggtggatcagaaac 143  Q
    | |||||||||||| || |||||    
T  15466040 ctcacctttggtgggtcggaaac 15466062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 33004149 - 33004043
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  |||| ||| |||||||  |||||| ||||| ||||||||||||||||||||||||||| |||  ||||||||||    
T  33004149 agctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtc 33004050  T
Q  120 gcccacc 126  Q
     ||||||    
T  33004049 acccacc 33004043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 42710266 - 42710149
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    |||||| || |||||| ||||||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||||||   || || |||||||| ||||    
T  42710266 ttccaaagacgtatccagaaaatatcgggttcgattttcaggggaaacaatacttggccagtgcgcatgcctctacgcataaaccgaattagtcgtccac 42710167  T
Q  126 ctttggtggatcagaaac 143  Q
    | ||||| |||| |||||    
T  42710166 cattggtagatcggaaac 42710149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 10422762 - 10422874
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || |||| |||  ||||||||||||||||   ||| |||||||| ||||||||||||||||||||||||||  ||  ||||||||||    
T  10422762 agctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 10422861  T
Q  120 gcccacctttggt 132  Q
    | |||||||||||    
T  10422862 gtccacctttggt 10422874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 40288611 - 40288483
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||  |||||||||||||| |||||||||  |||||||||||| | |||  ||||||||||    
T  40288611 agctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagccggattagtc 40288512  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
    || || | ||||||| || ||||| ||||    
T  40288511 gctcatccttggtgggtcggaaaccagtg 40288483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 6563415 - 6563498
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||||||| ||| | || ||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||    
T  6563415 agctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgc 6563498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 26325786 - 26325909
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| |||||||   |||| |||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||  ||  ||||||||||    
T  26325786 agctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 26325885  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  26325886 gtccaccattggtgggtcggaaac 26325909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 31152690 - 31152803
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||||||| || |  ||||||||||||||||  | ||||||| ||||||||| |||||||| ||||||||| | ||| ||  |||||||    
T  31152690 agctctttccaaggatgtacccagggaataccgggttcgatttcccgggggaataacgcttggtcagtgcgcgtgcctctacacacgagtcaaattagtc 31152789  T
Q  120 gcccacctttggtg 133  Q
    | ||||||||||||    
T  31152790 gtccacctttggtg 31152803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 34697335 - 34697419
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    |||||| ||||||||||| |||||||||||| |||||| |||| ||||||||||||||  ||  |||||||||||||||| ||||    
T  34697335 aataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagccggattagtcgcccacttttg 34697419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 17358605 - 17358522
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||| |||||| ||||  ||  ||||||||||||||||||||||| |||||||||||| ||| ||||||||||| |||||    
T  17358605 agctcatttcaaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgc 17358522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 21849307 - 21849225
Alignment:
Q  51 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||  |||||||||||| |||  |||||||    
T  21849307 cgggttcgattcccagggg-aacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgg 21849225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 48798204 - 48798121
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| |||||| || ||||||||  |||| |||||||||||  |||||||||||||||||| | |||||||||||||||||||    
T  48798204 agctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgc 48798121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 9659312 - 9659199
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||| ||||| |||  |||  ||||||||||||||||| |||||| ||||||| ||| | ||||||||||||| |||||  ||  ||||||||||    
T  9659312 agctcattctaaggacgtactcggggaataccgggttcgattcccagggg-aacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtc 9659214  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||||||||    
T  9659213 gtccacctttggtgg 9659199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 10173104 - 10172982
Alignment:
Q  21 gctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    |||| ||||||||| ||||| ||  |||||||| ||| |||| ||    |||||||||||||||||||| |||||||||||||  ||  ||||||| |||    
T  10173104 gctccttccaaggacgtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcg 10173005  T
Q  121 cccacctttggtggatcagaaac 143  Q
    |||||||||||||| || |||||    
T  10173004 cccacctttggtgggtcggaaac 10172982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 16263528 - 16263602
Alignment:
Q  29 caaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||| ||||| ||  |||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  16263528 caaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgc 16263602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 44969664 - 44969761
Alignment:
Q  45 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||| ||||||||||||||| | |||||||||||||||||| ||||||| ||||||  ||  ||||||||||| ||| | |||||||||| |||||    
T  44969664 aaataccaggttcgattctcaggag-aacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaac 44969761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 41696701 - 41696608
Alignment:
Q  51 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 144  Q
    |||||||||||  ||||||||  ||| |||| |||||| | |||||||||||| |||||| |||||||||| |||||||| |||||| ||||||    
T  41696701 cgggttcgatttccagggggattaacacttgaccagtgtgtatgcctctacgcacgaatcagattagtcgctcacctttgatggatcggaaact 41696608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 45536688 - 45536765
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||| || ||| ||||| ||||||||||||||||   | ||||||||||||||||||||||| |||||||||||||    
T  45536688 ttccaatgacgtacccggagaataccgggttcgatttctaaggggaacaacgcttggccagtgcacatgcctctacgc 45536765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 5063981 - 5063866
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||| ||||| ||  ||||  || ||||||||| ||||| | |||||||||||||||||| ||| ||||| || |||   |||||    
T  5063981 aagaagctccttccaaggacgtatctggggaatattggattcgattcttaggggca-caacgcttggccagtgcgtatgtctctatgcacgagctggatt 5063883  T
Q  116 agtcgcccacctttggt 132  Q
    |||||||||||||||||    
T  5063882 agtcgcccacctttggt 5063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 13262063 - 13262163
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||||||||  ||  ||||||||||||||||  ||||| |||||||| |||| || | |||||| |||||||| ||| |||||||||||| ||||    
T  13262063 ttccaaggatgtatatggggaataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtccac 13262162  T
Q  126 c 126  Q
    |    
T  13262163 c 13262163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 34877970 - 34878045
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 101  Q
    ||||||||| |||| |||  |||||| ||||||||||  ||| |||||||| ||||||||||||||||||||||||    
T  34877970 ttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgcgcatgcctctac 34878045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 45726541 - 45726450
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    |||||| ||||||||||||||| |||| |||  |||||||||||| ||| ||||||||  ||  |||||||||||  |||||||||||||||    
T  45726541 aatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctttggtggatc 45726450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 8905284 - 8905211
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 94  Q
    ||||| |||||| || ||||||||| |||| ||||| ||||| ||| ||||||||||||||||||||||||||||    
T  8905284 agctccttccaatgacgtatccggagaatatcgggtacgatt-tcaaggggaacaacgcttggccagtgcgcatg 8905211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 48761156 - 48761262
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||| |||||||| | |||||| || ||||||| ||| | ||||||||| |||| |||||  ||||||||||||| |||   |||||||||| ||||    
T  48761156 ttccaagaatgtatcccggaaatactggattcgattttcaagaggaacaacgtttggtcagtggacatgcctctacgcacgagctggattagtcgtccac 48761255  T
Q  126 ctttggt 132  Q
    |||||||    
T  48761256 ctttggt 48761262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 4581758 - 4581693
Alignment:
Q  78 cttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||||||||||||||| |||  |||| |||||| ||||||||||||| || |||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaac 4581693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 12744622 - 12744534
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||  ||  || ||||||||| |||  ||||||| ||||||||    
T  12744622 ttcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcactgttggtgggtcagaaac 12744534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 12755612 - 12755524
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||  ||  || ||||||||| |||  ||||||| ||||||||    
T  12755612 ttcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcactgttggtgggtcagaaac 12755524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 31734269 - 31734344
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 102  Q
    ||||||||||||| |||   ||||| || ||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  31734269 ttccaaggatgtacccgaggaatactggattcgattct-aggggaaacaacgattggccagtgcgcatgcctctacg 31734344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 32845 - 32928
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||| | ||  |||| ||||| |||||| |||| |||||||||||||| |||||| |||||||||||||    
T  32845 agctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctctacgc 32928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 38859219 - 38859140
Alignment:
Q  51 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    |||||||||||| |||||| ||||| | |||| || ||| ||||||||||||| ||| || ||||| |||||||||||||    
T  38859219 cgggttcgattcccaggggtaacaatgtttggtcaatgcacatgcctctacgcacgagtcagattaatcgcccacctttg 38859140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 892431 - 892314
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| |||| |||  |||||||||||||||||  |||||||||||| ||| |||| || |||||||     ||  ||  ||||||||||    
T  892431 agctcctttcaaggacgtattcggggaataccgggttcgattcctagggggaacaacacttagccaatgtgcatgcc-----gcatgagccggattagtc 892337  T
Q  120 gcccacctttggtggatcagaaa 142  Q
    |||||||||||||||||| ||||    
T  892336 gcccacctttggtggatcggaaa 892314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 5504038 - 5504128
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||  |||||||||||   ||||| |||||||||||||  ||  ||||||||||| ||||||||| ||| || |||||    
T  5504038 ggttcgattctcagggaaaacaacgcttgattagtgcacatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaac 5504128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 14357735 - 14357825
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatta 116  Q
    ||||||||| ||||| |||||||| | |||||||||  ||   | ||||||| ||| ||||||||||||||||||||| |||| |||||||    
T  14357735 ttccaaggacgtatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcatgcctctacgcacgaaccggatta 14357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 26258670 - 26258783
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || ||| ||||  |||||||| |||||||||||||  || |||||||||| |||||| ||||||| |||||  || |||||||| ||    
T  26258670 agctccttccaaagacgtacccggggaataccggattcgattctcaggaaga-caacgcttggtcagtgcacatgcctttacgcatgagtcggattaatc 26258768  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||| ||||    
T  26258769 gtccacctttagtgg 26258783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 51437443 - 51437517
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatg 94  Q
    ||||| || |||||| |||||||   |||| |||||||||||| || ||||||||||||||| ||||||||||||    
T  51437443 agctcctttcaaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcatg 51437517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 5143239 - 5143171
Alignment:
Q  68 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||||||||||||| |||| ||||||||||||||| | |  |||||||||||| |||||||| ||||||    
T  5143239 gggaacaacgcttggtcagtacgcatgcctctacgcac-agacggattagtcgctcacctttgatggatc 5143171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 26660138 - 26660234
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||  || ||||||||||  |||  |||| |||||||||||||||  ||  ||||||||||| ||||||||||||| || |||||    
T  26660138 aataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggtgggtcggaaac 26660234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 28324688 - 28324631
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||| |||||||||||| | |||| |||||| ||||| ||||||||||||||||||||    
T  28324688 aatatcgggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgc 28324631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 35908757 - 35908838
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgctt-ggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc 126  Q
    |||||||| ||||||| | |||||||||||| ||| || ||||||||||||||||||||  ||  ||||||||||| |||||    
T  35908757 aataccggattcgatttttagggggaacaacactttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacc 35908838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 47313026 - 47312950
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||| ||||| ||  ||||||||||| |||||  ||||| ||||||| |||||||||||| ||||||||||||    
T  47313026 ttccaaggacgtatctggggaataccgggtttgattcctagggg-aacaacgtttggccagtgcgtatgcctctacgc 47312950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 18808272 - 18808316
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcct 97  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||    
T  18808272 ggttcaattctcagagggaacaacgcttgaccagtgcgcatgcct 18808316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 25165401 - 25165488
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||||| ||||||| ||||||| |||||| ||  ||||||||||||||||||| || | |  |||||||||| | ||||||||||||    
T  25165401 aataccggattcgattatcagggg-aacaacactctgccagtgcgcatgcctctaggcacaagccggattagtcactcacctttggtgg 25165488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 6899597 - 6899655
Alignment:
Q  85 agtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||| ||||| | |  ||||||||||||||||||||| |||||| |||||    
T  6899597 agtgcgcatgcctttacgcacaagccggattagtcgcccacctttgatggatcggaaac 6899655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 17988767 - 17988694
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    |||||| |||| |||| ||||||  ||||| ||||||||||||||||| |||||||||  ||| |||||||||||    
T  17988767 aataccaggtttgattttcaggga-aacaatgcttggccagtgcgcatacctctacgcatgaaccggattagtcg 17988694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 38791699 - 38791621
Alignment:
Q  65 agggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||| ||||||| ||||| |||||||||||||||||||  ||  || |||||||| ||| ||||| ||||||| ||||    
T  38791699 aggggaaacaacgattggcaagtgcgcatgcctctacgcatgagccgaattagtcgtccatctttgatggatcaaaaac 38791621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 103
Target Start/End: Original strand, 42744801 - 42744835
Alignment:
Q  69 ggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||||||||||||||| ||||||||||||||    
T  42744801 ggaacaacgcttggccagtgagcatgcctctacgc 42744835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 13265914 - 13265995
Alignment:
Q  22 ctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||| ||||| |||||||   |||||| ||||||||||  ||||  |||||||  | ||||||||||||||||||||||    
T  13265914 ctcattctaaggacgtatccgaggaatacctggttcgattcctagggaaaacaacgtctagccagtgcgcatgcctctacgc 13265995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 32151023 - 32150946
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    |||||||||  |||||||||||||  |||| |||||||||||||| |||||  ||  || ||||||||| ||||||||    
T  32151023 ggttcgatttccagggggaacaacatttggtcagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttg 32150946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 18708648 - 18708564
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    ||||| ||||||||||  |||||| | ||| ||||||| ||||||||||||||||| |  ||  | |||||||||| ||||||||    
T  18708648 aatactgggttcgatttccaggggaagcaatgcttggctagtgcgcatgcctctacacatgagccagattagtcgctcacctttg 18708564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 19195391 - 19195423
Alignment:
Q  71 aacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||| |||||||||||||||||||||||||    
T  19195391 aacaacgtttggccagtgcgcatgcctctacgc 19195423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 50094925 - 50095001
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||| ||| ||||| ||||||| |||||||  || |||||||||||| ||||| || |||| || |||||    
T  50094925 ggggaacaacgtttgaccagtacgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaac 50095001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 30767375 - 30767253
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||||||| | ||  |||| |||||||||||  ||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  30767375 ttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccac 30767276  T
Q  126 ctttggtggatcagaaactagtg 148  Q
    ||||||||| || ||||||||||    
T  30767275 ctttggtgggtcggaaactagtg 30767253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 49198330 - 49198447
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    |||||||||  |||||||  |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||| ||||    
T  49198330 ttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccac 49198429  T
Q  126 ctttggtggatcagaaac 143  Q
    | ||||||||||||||||    
T  49198430 cattggtggatcagaaac 49198447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 7328823 - 7328930
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||  ||  ||||||||||||||||    
T  7328823 ttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccac 7328921  T
Q  126 ctttggtgg 134  Q
    |||||||||    
T  7328922 ctttggtgg 7328930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 35315929 - 35316052
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||   |||||||||    
T  35315929 agctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagctggattagtc 35316028  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |||||| |||||||| || |||||    
T  35316029 gcccacttttggtgggtcggaaac 35316052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 51060415 - 51060292
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||||||| |||||||  |||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||  |||||||||    
T  51060415 agctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtc 51060316  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  51060315 gtccaccattggtgggtcggaaac 51060292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 13893899 - 13894016
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| || |||||  ||||||||||| ||||  ||||||||||||||||||| || ||||||||||||||| | |||  ||||||||||    
T  13893899 agctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacgagccggattagtc 13893998  T
Q  120 gcccacctttggtggatc 137  Q
    ||||||||||||||||||    
T  13893999 gcccacctttggtggatc 13894016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 8164552 - 8164648
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaa 142  Q
    |||||||||||| |||   | ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  8164552 aataccgggttcaatttctaaggggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaa 8164648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 41630646 - 41630534
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||| ||| ||| |||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||| |  ||  ||||||||||    
T  41630646 agctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctctacacatgagccggattagtc 41630547  T
Q  120 gcccacctttggt 132  Q
    |||||||||||||    
T  41630546 gcccacctttggt 41630534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 15320159 - 15320282
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||   ||| ||||||| | |||||||||| |||||||||||||| |||  ||||||||||    
T  15320159 agctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacgagccggattagtc 15320258  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| ||||||||    
T  15320259 gcccacctttggtgggtcagaaac 15320282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 11687247 - 11687161
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacg 102  Q
    ||||||||| ||||||||| ||| | ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  11687247 aagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtgcgcatgcctctacg 11687161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 30045820 - 30045922
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaacta 145  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| |||||||| ||| || ||||||||| ||||||||| ||| ||  ||||||    
T  30045820 aataccgggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaacta 30045919  T
Q  146 gtg 148  Q
    |||    
T  30045920 gtg 30045922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 28572319 - 28572222
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||| ||||||||||| |||||| |||||||||||||||||  |||||||||||||| |||  ||||||||||||||||||||||||| || |||||    
T  28572319 aatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 28572222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 35923757 - 35923640
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| | ||| |||||| ||||||||||  ||||||||||||| |||||||||||||||||||||| || ||| ||| |||||||    
T  35923757 agctcattccaaggacgtacctggagaataccaggttcgattcatagggggaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtc 35923658  T
Q  120 gcccacctttggtggatc 137  Q
    | ||| ||||| ||||||    
T  35923657 gtccatctttgatggatc 35923640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 6462385 - 6462485
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||| ||  ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  6462385 agctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 6462484  T
Q  120 g 120  Q
    |    
T  6462485 g 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 26043812 - 26043908
Alignment:
Q  47 ataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||  ||  |||||||||||| |||||||||||  ||||||||    
T  26043812 ataccgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaac 26043908  T

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Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 29135892 - 29136000
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||||||||  |||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||  ||||    
T  29135892 ttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccac 29135991  T
Q  126 ctttggtgg 134  Q
    | |||||||    
T  29135992 cattggtgg 29136000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 49543492 - 49543616
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||||| |  |||| ||||||||||||||| ||||||||||| |||| ||||| |||||||||||||| |||  || |||||||    
T  49543492 agctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccgaattagtc 49543591  T
Q  120 gcccacctttggtggatcagaaact 144  Q
    |||||||||| |||| || ||||||    
T  49543592 gcccacctttagtgggtcggaaact 49543616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 51683088 - 51682960
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || ||||||||  |||||| |||||||||| |||||||||||||||||| ||||||||||||||||| | | |||  ||||||||||    
T  51683088 agctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacgagccggattagtc 51682989  T
Q  120 gcccacctttggtggatcagaaactagtg 148  Q
    |||||||  |||||| || ||||| ||||    
T  51682988 gcccaccaatggtgggtcggaaaccagtg 51682960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 47219117 - 47219240
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  |||||| |||||||||| || ||| ||||||||||||| |||||||||||||||||||  ||  ||||||||||    
T  47219117 agctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtc 47219216  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||||||| ||| || |||||    
T  47219217 gtccacctttgatgggtcggaaac 47219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 48341993 - 48342116
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||  |||||||||||| ||||  ||||||||||||||||||| |||||||||||||||||||  ||| | ||||||||    
T  48341993 agctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctctacgcatgaaccagattagtc 48342092  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||| |||||||||||| |||||    
T  48342093 gtccatctttggtggatcggaaac 48342116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 50405705 - 50405614
Alignment:
Q  52 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||  ||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| || |||||    
T  50405705 gggttcgattccgaggggaaacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaac 50405614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 53649700 - 53649823
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||  ||  ||||||||||    
T  53649700 agctccttccaaggacgtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggattagtc 53649799  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |  |||||||| |||||| |||||    
T  53649800 gttcacctttgatggatcggaaac 53649823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 10040530 - 10040643
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||| ||||| ||| ||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||| | |||    
T  10040530 agctccttctaaggacgtacccggggaatatcgggttcgattctcagggg-aacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtc 10040628  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||||||||    
T  10040629 gtccacctttggtgg 10040643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 10855357 - 10855459
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||||||||||   || |||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||||| |||| || |||||||    
T  10855357 agctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctctacgcacgaaccgaattagtc 10855456  T
Q  120 gcc 122  Q
    |||    
T  10855457 gcc 10855459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 25294933 - 25295047
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||| ||  ||  ||||||||||    
T  25294933 agctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtc 25295032  T
Q  120 gcccacctttggtgg 134  Q
    | ||||| |||||||    
T  25295033 gtccaccattggtgg 25295047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 42412908 - 42412802
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||| | |||||||||||||||||| ||||| |||||||||||||  ||  ||||||||||    
T  42412908 agctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccggattagtc 42412809  T
Q  120 gcccacc 126  Q
    || ||||    
T  42412808 gctcacc 42412802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 47749232 - 47749127
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| |||||| |  |||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||| |||  || |||||||||||||    
T  47749232 ttccaaggacgtatccagggaataccgggttcgattcctagggg-aacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccac 47749134  T
Q  126 ctttggt 132  Q
    |||||||    
T  47749133 ctttggt 47749127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 3507641 - 3507544
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||| |||||  || ||||||||| |||||||||||||||||||||||||| |||  |||||||||||| |||||||||||| || |||||    
T  3507641 aataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaac 3507544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 29127898 - 29128015
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||||| ||  |||| |||||||||||  ||||| ||||||| ||||| ||||||||||||||||||||  ||  ||||||||||||||||    
T  29127898 ttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccac 29127997  T
Q  126 ctttggtggatcagaaac 143  Q
    ||||||||| || |||||    
T  29127998 ctttggtgggtcggaaac 29128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 40944852 - 40944976
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||||||||| |||||| || ||||||| ||||||||| ||||||||||||| |||  |||||  ||||||||||||||  | | ||||||    
T  40944852 aagaagctccttccaaggacgtatccagagaataccgagttcgattcccagggggaacaacacttaaccagtatgcatgcctctacgcatg-agcggatt 40944950  T
Q  116 agtcgcccacctttggtggatcagaa 141  Q
    |||||| |||||||||||| ||||||    
T  40944951 agtcgctcacctttggtgggtcagaa 40944976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 49082797 - 49082906
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||| ||||| ||||||||  ||||||| ||||||||| ||||| ||||||||||| |||||||||||||| ||||| | |||||| ||||||||    
T  49082797 agctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatgcatctacacacgaatcagattagtc 49082896  T
Q  120 gcccaccttt 129  Q
     |||||||||    
T  49082897 acccaccttt 49082906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 3136831 - 3136716
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| || |||||| ||| ||||  |||||||| ||||||| ||||||| |||||| ||||| ||||||||||||||||||||  || |||||||    
T  3136831 aagaagctcctttcaaggacgtacccggggaataccggattcgattttcagggg-aacaacacttgggcagtgcgcatgcctctacgcatgagtcggatt 3136733  T
Q  116 agtcgcccacctttggt 132  Q
    ||||| |||||||||||    
T  3136732 agtcgtccacctttggt 3136716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 7650226 - 7650314
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||||||||||  ||||||||||||| |||||||||| || ||| |||||||| |||  |||||||||||||||||||||||||    
T  7650226 aataccgggttcgatttccagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgg 7650314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 26207935 - 26207835
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||||||| ||||  ||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||||  ||  ||||||||||    
T  26207935 agctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatgagccggattagtc 26207836  T
Q  120 g 120  Q
    |    
T  26207835 g 26207835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 29762289 - 29762166
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||||||||||| |||  |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||| ||  ||   |||||||||    
T  29762289 agctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatgagctggattagtc 29762190  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    | ||||| ||||||| || |||||    
T  29762189 gtccaccattggtgggtcggaaac 29762166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 54261199 - 54261322
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| | ||  |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  54261199 agctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 54261298  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    |  ||||||| |||| || |||||    
T  54261299 gttcacctttagtgggtcggaaac 54261322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 928573 - 928686
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| |  |  |||||| | |||||||||||||||||||||| |||| |||||||||||||| |||||| |||  ||||||||||    
T  928573 agctcattccaaggacgtacctagggaataccagattcgattctcagggggaacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtc 928672  T
Q  120 gcccacctttggtg 133  Q
      ||||||||||||    
T  928673 atccacctttggtg 928686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 31072851 - 31072963
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| ||| ||||| |||||| |||||||||  ||||||||||||||||||| |||||| ||||||||||||| |||  | ||||| ||    
T  31072851 agctcctttcaaggacgtacccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgacccagattaatc 31072950  T
Q  120 gcccacctttggt 132  Q
    | |||||||||||    
T  31072951 gtccacctttggt 31072963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 15795627 - 15795522
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||| |||   | |||||||    
T  15795627 agctccttccaaggacgtacccggggaataccgagttcgattcccagggg-aacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagtc 15795529  T
Q  120 gcccacc 126  Q
    |||||||    
T  15795528 gcccacc 15795522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 45877433 - 45877527
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    ||||||||| ||||||||  ||||||||||||||||  |||||| |||||| |||||||||||| |||||||||||||  ||  |||||||||||    
T  45877433 ttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcg 45877527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 3763024 - 3763144
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| |||||||| ||||||||| |||||||| ||| || |||||||||||| ||||| ||||| |||||||| ||||  |||||||||    
T  3763024 agctcctttcaaggacgtatccgggaaataccggattcgattcacagagg-aacaacgcttggtcagtgtgcatgtctctacgcacgaactggattagtc 3763122  T
Q  120 gcccacctttggtggatcagaa 141  Q
    | ||||| ||| | ||||||||    
T  3763123 gtccaccattgatagatcagaa 3763144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 7310811 - 7310714
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||| ||| ||||||||| |||| || ||| |||||||||||||| |||  |||||||||||| || ||||||||| || |||||    
T  7310811 aataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaac 7310714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 47303617 - 47303512
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| |||||||||||||| |||||| ||||| |||| |||||||| ||||| |||||| ||||||||||| |  ||  ||||||||||| | ||    
T  47303617 ttccaaggacgtatccggaaaatatcgggtttgattcccaggaggaacaacacttggtcagtgcacatgcctctacacatgagccggattagtcgtcaac 47303518  T
Q  126 ctttgg 131  Q
    ||||||    
T  47303517 ctttgg 47303512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 32873682 - 32873571
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||||||||||||| ||| |||| || |||| ||||||||||  |||| |||||||||||| ||||||| ||||||||||||   ||  | ||||||||    
T  32873682 agctcattccaaggacgtacccgggaa-taccaggttcgattcctagggagaacaacgcttgaccagtgcacatgcctctacgtatgagccagattagtc 32873584  T
Q  120 gcccacctttggt 132  Q
    |||||||||||||    
T  32873583 gcccacctttggt 32873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 43330815 - 43330743
Alignment:
Q  71 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||| |||| ||||||||||||||||||||| |||  ||||||||||||||||||||||||| ||| ||||    
T  43330815 aacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaac 43330743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 7648756 - 7648823
Alignment:
Q  63 tcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  7648756 tcagggggaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgcccacctttg 7648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 52364934 - 52364851
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||| ||| ||||  ||||||| ||||||||| |||  ||||||||||||| |||||||||||||||||||||    
T  52364934 agctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgc 52364851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 33251635 - 33251745
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||  ||  ||||||||||||||||| | | |||||||||| |||||||||| ||||||||||||||  ||  ||||||||||    
T  33251635 agctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtc 33251734  T
Q  120 gcccacctttg 130  Q
    | |||| ||||    
T  33251735 gtccacatttg 33251745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 26590368 - 26590319
Alignment:
Q  52 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 101  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  26590368 gggttcgattctcagggggaacaacgcttggtcagtgtgcatgcctctac 26590319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 47471831 - 47471927
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||| |||||| ||||| ||||||| ||||||||||| |||||||  ||  || |||||||| ||||||||||||| || |||||    
T  47471831 aataccgggttcgattcccagggg-aacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaac 47471927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 3755543 - 3755655
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| || |||||| ||||||||  |||||||  |||||||| |||| ||||||||| ||| |||||||||||| ||||||||  ||  ||||||||||    
T  3755543 agctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtc 3755642  T
Q  120 gcccacctttggt 132  Q
    | | |||||||||    
T  3755643 gtctacctttggt 3755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 4638160 - 4638236
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    |||||||||| |||| | ||||||||||| ||||||||||| ||||||||| |||  ||||||||| ||||||||||    
T  4638160 ggttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagtagcccaccttt 4638236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 23511566 - 23511650
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttg 130  Q
    |||| |||||||||||| || ||||| ||||| ||| |||||||||||||||||||||  || |||||||| ||| |||||||||    
T  23511566 aatatcgggttcgattcacaaggggagcaacgtttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttg 23511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 7613034 - 7612987
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcat 93  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  7613034 aataccgggttcgattcccagggggaacaacgcttggctagtgcgcat 7612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 41219599 - 41219682
Alignment:
Q  54 gttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||| ||| |||   |||||| || | |||||||||||||||    
T  41219599 gttcgattctcaggaggaacaacgtttggccagtgcgtatgcctctgcgcacgagctggattaatcactcacctttggtggatc 41219682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 54237417 - 54237504
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||  || |||||| |||||||| ||||| |||| |||||| |||||| ||||||| ||||| ||||||||||| ||||||||    
T  54237417 aagaagcttctttcaaggacgtatccgggaaatatcggggtcgattttcagggagaacaacacttggtcagtgcgcatgtctctacgc 54237504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 55069765 - 55069690
Alignment:
Q  68 gggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||| ||||||||||| ||||||||||||| |||  ||||||| |||| |||||||||||| || |||||    
T  55069765 gggaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaac 55069690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 26362068 - 26361978
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| ||||| || ||||||||||| |||| ||||| |||||||||||||| |||  |||||||||||| |||||||| ||| || |||||    
T  26362068 ggtttgattcccaaggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaac 26361978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 39849076 - 39849149
Alignment:
Q  51 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    |||||||||||| ||| || |||||||||||||||||| ||||||||||||||  ||  ||||||||||||||||    
T  39849076 cgggttcgattcccagagg-aacaacgcttggccagtgtgcatgcctctacgcatgagccggattagtcgcccac 39849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 40660465 - 40660347
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    ||||||||| ||| || ||  ||||||| ||||||||| ||||||||  ||| ||||||||  |||| ||||||||||||||||||||  ||| ||||||    
T  40660465 aagaagctccttctaaagagttatccgggaaataccggattcgattcctaggaggaacaacatttggtcagtgcgcatgcctctacgcatgaaccggatt 40660366  T
Q  116 agtcgcccacctttggtgg 134  Q
    | ||   ||||||||||||    
T  40660365 aatcattcacctttggtgg 40660347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 45402486 - 45402361
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggatt 115  Q
    |||||||||||||   ||||||| ||||  |||| ||||||||||||  || ||||||||| || |||| ||||||||||||||||||  ||  ||||||    
T  45402486 aagaagctcattc---ggatgtacccggggaatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctctacgcatgagccggatt 45402390  T
Q  116 agtcgcccacctttggtggatcagaaact 144  Q
    |||||  ||||||| |||| || ||||||    
T  45402389 agtcgttcacctttagtgggtcggaaact 45402361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 8362576 - 8362673
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||| |||| ||| || ||||||| ||||||||| |||||||||||||||  ||  |  |||||||| |||||||| ||||||| |||||    
T  8362576 aataccgggttcaattcccagtggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaaac 8362673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 24506751 - 24506659
Alignment:
Q  50 ccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||| ||||||  ||||||||||| ||||||| |||||||||||||  || || |||||||||| |||| ||||||| || |||||    
T  24506751 ccgggttcgattttcaggga-aacaacgcttgaccagtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaac 24506659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 28242251 - 28242352
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| |||||| || ||||||||| ||||||||||| ||||  |||| ||||||| | ||||||||||| |||||||||| ||  ||  ||||||||||    
T  28242251 agctccttccaatgacgtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgcacatgcctctatgcatgaggcggattagtc 28242350  T
Q  120 gc 121  Q
    ||    
T  28242351 gc 28242352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 35998698 - 35998582
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    |||||| || ||| ||||| ||||||||||| |||| ||  ||| |||||||||||  |||||| ||||||||||||| ||| | |||||| ||| ||||    
T  35998698 ttccaaagacgtacccggagaataccgggtttgatt-tcgagggaaacaacgcttgatcagtgcacatgcctctacgcacgagttggattaatcgtccac 35998600  T
Q  126 ctttggtggatcagaaac 143  Q
    |||| |||| ||||||||    
T  35998599 ctttagtgggtcagaaac 35998582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 19146969 - 19147057
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||| ||||| |||||||||||||||||||| | || |||||| || |||   |||||||||| ||||||||||||| || |||||    
T  19146969 ttcgattttcaggaggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaac 19147057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 46529978 - 46529924
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 100  Q
    ||||||||||||||||||||| || ||||| |||| ||||||| |||||||||||    
T  46529978 aataccgggttcgattctcagaggaaacaatgcttcgccagtgtgcatgcctcta 46529924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 22909772 - 22909884
Alignment:
Q  35 tgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||||||| |||| ||||||||||||||| | ||||||||||| ||| ||||||||| | |||||||  ||  || ||||||||  |||||||| |||    
T  22909772 tgtatccggagaatatcgggttcgattctca-gaggaacaacgctaggctagtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgg 22909870  T
Q  135 atcagaaactagtg 148  Q
     || ||||| ||||    
T  22909871 gtcggaaaccagtg 22909884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 30735079 - 30735018
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttg 81  Q
    ||||||||||||||| | |  |||  ||||||| ||||||||||||||||||||||||||||    
T  30735079 agctcattccaaggacgcactcggggaataccgagttcgattctcagggggaacaacgcttg 30735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 34374533 - 34374453
Alignment:
Q  63 tcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||| |||||| ||||| ||||||||||||||| ||||   | |||||||||||||||  ||||||||| || |||||    
T  34374533 tcaggggaaacaacacttggtcagtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtcggaaac 34374453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 44064584 - 44064640
Alignment:
Q  87 tgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||||||  ||| |||||||||||| |||||||||||| || |||||    
T  44064584 tgcgcatgcctctacgcatgaaccggattagtcgctcacctttggtgggtcggaaac 44064640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 50682446 - 50682522
Alignment:
Q  16 aagaagctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgca 92  Q
    ||||||||| ||| || || |||| |||||||||  ||||||||||   |||| |||||||||||||||||||||||    
T  50682446 aagaagctccttcgaatgacgtattcggaaaatatagggttcgatttctagggagaacaacgcttggccagtgcgca 50682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 2668085 - 2668148
Alignment:
Q  71 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||| ||||||||||||||||||||||||||  ||   ||||||||||| ||||||| ||||    
T  2668085 aacaacacttggccagtgcgcatgcctctacgcaagagctggattagtcgctcacctttagtgg 2668148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 33688932 - 33689007
Alignment:
Q  28 ccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||| ||||| ||  |||| ||||||| ||||  | |||||| ||| ||||||||||||||||||||||||||    
T  33688932 ccaaggacgtatcgggggaatatcgggttcaattcctaaggggaataacacttggccagtgcgcatgcctctacgc 33689007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 45450579 - 45450498
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||||| | ||||||| | ||||| ||||| ||||  |||||| ||||| ||||| |||||||||||||||||||||    
T  45450579 agctcattccaag-acgtatccgtagaatactgggtttgatttccagggg-aacaatgcttgaccagtgcgcatgcctctacgc 45450498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 13167551 - 13167497
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 100  Q
    |||| |||||||||||| ||   ||||||||||||||||||||| ||||||||||    
T  13167551 aatatcgggttcgattcccaaaaggaacaacgcttggccagtgcacatgcctcta 13167497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 38394301 - 38394189
Alignment:
Q  26 ttccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||||||| ||||| | | |||||||| ||||||||||||||| ||||||||| || ||||||| |||  |||||||  ||  |||||||||| |||||    
T  38394301 ttccaaggacgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtttctacgcatgagccggattagtcacccac 38394204  T
Q  126 ctttggtggatcaga 140  Q
    |  |||||| |||||    
T  38394203 cagtggtgggtcaga 38394189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 5549270 - 5549346
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcct 97  Q
    ||||||||||||||||||||| ||  ||||| ||||||||||  |||   |||||||||||| ||| |||||||||||    
T  5549270 agctcattccaaggatgtatcagg-gaatactgggttcgatttccagtaagaacaacgcttgaccaatgcgcatgcct 5549346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 22405661 - 22405564
Alignment:
Q  36 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 133  Q
    |||||||  ||||||||| ||| ||||||||| ||||||||||||  ||| |||| |||||| || || |||  ||||||| ||| ||| ||||||||    
T  22405661 gtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaatgcctttatgcacgagccggattaatcgtccatctttggtg 22405564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 19873388 - 19873420
Alignment:
Q  69 ggaacaacgcttggccagtgcgcatgcctctac 101  Q
    ||||||| |||||||||||||||||||||||||    
T  19873388 ggaacaatgcttggccagtgcgcatgcctctac 19873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 41223140 - 41223089
Alignment:
Q  51 cgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||||||||| ||||||  ||||||| ||||||| |||||||||||||||||    
T  41223140 cgggttcgattatcaggga-aacaacgtttggccaatgcgcatgcctctacgc 41223089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 49021274 - 49021214
Alignment:
Q  83 ccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||||||||||||||||||||  ||  ||||||||||| ||||| ||||||| || |||||    
T  49021274 ccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaac 49021214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 68493 - 68604
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||   |||||||||||||||||| |||  ||||||||||    
T  68493 agctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtc 68589  T
Q  120 gcccacctttggtgg 134  Q
    |||||||||||||||    
T  68590 gcccacctttggtgg 68604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 6857 - 6954
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||  |||||||||||| |||||||||||| || |||||    
T  6857 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaac 6954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 155809 - 155730
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  155809 ttcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgg 155730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 25884 - 25794
Alignment:
Q  53 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||  |||| ||||||||||||||||||||||||| ||||||||  ||| | |||||||| |||||||||  ||| ||||||||    
T  25884 ggttcgattcctagggagaacaacgcttggccagtgcgcatgactctacgcgtgaaccagattagtcacccacctttactgggtcagaaac 25794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 8808 - 8710
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaact 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||   |||||||||| ||||||||||||| || ||||||    
T  8808 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaact 8710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 271207 - 271103
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||| |||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||| |||  ||| ||||||    
T  271207 agctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagccgggttagtc 271108  T
Q  120 gccca 124  Q
    |||||    
T  271107 gccca 271103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 249412 - 249337
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgc 121  Q
    |||||| |||||||||||||||| ||| |||||||| ||||||| ||| ||||||||| ||| |||||||||||||    
T  249412 aataccaggttcgattctcagggagaataacgcttgaccagtgcacatacctctacgcacgagtcggattagtcgc 249337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 219404 - 219462
Alignment:
Q  79 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatc 137  Q
    ||||||||||||||||||||||||| ||||  |||||||||| ||||||||| ||||||    
T  219404 ttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatc 219462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 250099 - 250044
Alignment:
Q  79 ttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    ||||||||||||||||||||||||| |||  |||||||||||| | ||||||||||    
T  250099 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgg 250044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 12576 - 12672
Alignment:
Q  45 aaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||||  ||||  ||||||||||| |||||||||||||||||||||  || |||||||||||||||||||||| ||||| ||||||    
T  12576 aaataccgggttcgattcctaggg--aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaac 12672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 7961 - 7845
Alignment:
Q  27 tccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc 126  Q
    |||||||| ||| ||||  ||||||||||| ||||| || |||||| ||| ||||||||||||||||||||||||||   |   ||||||||||||||||    
T  7961 tccaaggacgtacccggggaataccgggtttgattcccaaggggaaaaacacttggccagtgcgcatgcctctacgcattagctggattagtcgcccacc 7862  T
Q  127 tttggtggatcagaaac 143  Q
    ||||||||||| |||||    
T  7861 tttggtggatcggaaac 7845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 95063 - 94999
Alignment:
Q  71 aacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacc-tttggtgg 134  Q
    ||||||| ||| ||||||||||||||| |||||  ||  ||||||||||||||||| ||||||||    
T  95063 aacaacgtttgaccagtgcgcatgcctttacgcatgagccggattagtcgcccaccatttggtgg 94999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 41046 - 41133
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtg 133  Q
    |||| ||||||||||||||| |||||||||| ||||| ||||| |||||||||||||| |||  ||||||||||||||| ||||||||    
T  41046 aatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctctacgcacgagccggattagtcgcccatctttggtg 41133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 319398 - 319512
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||||||||  ||||||||||| ||||   ||||||||||||||||||||||||||||| |||||| ||  ||   |||||||||    
T  319398 agctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatgagctggattagtc 319497  T
Q  120 gcccacctttggtgg 134  Q
    | |||||||||||||    
T  319498 gtccacctttggtgg 319512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 546 - 669
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtc 119  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||| ||||  ||||| |||||||||||||   ||  | ||||||||    
T  546 agctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagattagtc 645  T
Q  120 gcccacctttggtggatcagaaac 143  Q
    || |||||||||||| || |||||    
T  646 gctcacctttggtgggtcggaaac 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 412159 - 412091
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtg 88  Q
    ||||| ||||||||| ||||||||  ||||||| ||||||||| ||||||||||||||||||| |||||    
T  412159 agctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacgcttggtcagtg 412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 139437 - 139491
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctcta 100  Q
    |||| |||||||||||| ||   ||||||||||||||||||||| ||||||||||    
T  139437 aatatcgggttcgattcccaaaaggaacaacgcttggccagtgcacatgcctcta 139491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 18608 - 18691
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    ||||| ||||||||||||| ||| | || ||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||    
T  18608 agctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgc 18691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 26185 - 26264
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccac 125  Q
    ||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||| ||||    
T  26185 aatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccac 26264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 8151 - 8231
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctac 101  Q
    ||||| ||||||||| ||| ||||  ||||||||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  8151 agctccttccaaggacgtacccggggaataccgggttcgattcccaaggg-aacaacgcttggccagtgcgcatgcctctac 8231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 42939 - 42842
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    |||| ||||||||||||  |||| |||||| |||||| |||||||||||||||||| |  ||  ||||||||||||||||||||||||| || |||||    
T  42939 aatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaac 42842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 9438 - 9479
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  9438 aataccgggttcgattcccagggggaacaacgcttggccagt 9479  T

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Target: scaffold0316 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 1721 - 1633
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||| |||||||||  |||||||||||||| || ||||||||||||||||||||||  ||  |  ||||||||||||||||||||||    
T  1721 aataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgg 1633  T

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Target: scaffold0024 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 149396 - 149484
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||  |||    |||||||||||||||  |||||| ||||||||    
T  149396 ttcgattctcagggggaacaacgcttgaccagtgtgcatgcctctacgtacgaggtagattagtcgcccaccaatggtgggtcagaaac 149484  T

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Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 16887 - 16969
Alignment:
Q  52 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtgg 134  Q
    |||||| ||||||||||| |||||||||||| ||||||| ||| |||||||| |||  | |||||||||| ||||||||||||    
T  16887 gggttcaattctcaggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagattagtcgctcacctttggtgg 16969  T

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Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 143
Target Start/End: Original strand, 51735 - 51826
Alignment:
Q  48 taccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| ||    || |||  ||||| ||||||||||||||| |||||| |||||    
T  51735 taccgggttcgattcccagagggaacaacgcttggccagtgcgcatgtct----gcacgagccggatcagtcgcccacctttgatggatctgaaac 51826  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 72609 - 72686
Alignment:
Q  20 agctcattccaaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctc 98  Q
    ||||| ||||||||| ||||| || || ||||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  72609 agctccttccaaggacgtatcagggaa-taccgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctc 72686  T

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Target: scaffold0384 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 5975 - 6071
Alignment:
Q  46 aataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||| |||||||||||||  ||  || |||||||| ||||| ||||||| || |||||    
T  5975 aatactgggttcgatttccaggggga-caacgcttggccagtgcacatgcctctacgcatgagacgaattagtcgtccaccattggtgggtcggaaac 6071  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 224303 - 224416
Alignment:
Q  30 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    ||||| |||| |||| |||| ||||||||| |||||||| ||| |||| |||  |||||| ||| ||||||||| |||  ||||||||||| ||| ||||    
T  224303 aaggacgtattcggagaatatcgggttcgaatctcagggagaataacgtttgatcagtgcacatacctctacgcacgagccggattagtcgtccatcttt 224402  T
Q  130 ggtggatcagaaac 143  Q
    ||||| || |||||    
T  224403 ggtgggtcggaaac 224416  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 186504 - 186593
Alignment:
Q  30 aaggatgtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcg 120  Q
    ||||||||||  ||| |||| ||||||||||| |||||| ||| || | |||| |||||| ||||||||||||| |||  |||||||||||    
T  186504 aaggatgtatttggagaatatcgggttcgatt-tcagggagaataatgtttggtcagtgcacatgcctctacgcacgagccggattagtcg 186593  T

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Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 17401 - 17489
Alignment:
Q  55 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||||||| || || ||||| ||||||||||||| ||||| | |||  ||||||||||||||||| ||| ||| || |||||    
T  17401 ttcgattctcaggggaaaaaatgcttgaccagtgcgcatgcttctacacacgagccggattagtcgcccaccattgatgggtcggaaac 17489  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 25108 - 25184
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccacctttggtggatcagaaac 143  Q
    ||||||||||  |||| |||||||||||  |||||||  ||||| ||||| ||| |||||||||||||||| |||||    
T  25108 ggggaacaacatttggacagtgcgcatgtttctacgcatgaatcagattaatcgtccacctttggtggatcggaaac 25184  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 65238 - 65202
Alignment:
Q  67 ggggaacaacgcttggccagtgcgcatgcctctacgc 103  Q
    |||||||||||||||||||||||||||| ||||||||    
T  65238 ggggaacaacgcttggccagtgcgcatgtctctacgc 65202  T

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Target: scaffold0635 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 2207 - 2114
Alignment:
Q  36 gtatccggaaaataccgggttcgattctcagggggaacaacgcttggccagtgcgcatgcctctacgctcgaatcggattagtcgcccaccttt 129  Q
    |||||||  ||||||||| ||||||||||||  |||||||||||||   || |||||||| |||| ||   | |||||||||||| ||||||||    
T  2207 gtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttctatgcataagtcggattagtcgtccaccttt 2114  T

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