View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20262_high_92 (Length: 294)
Name: NF20262_high_92
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20262_high_92 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 6991155 - 6991419
Alignment:
| Q |
19 |
aataatcaaatctataactaattatcggacatagttgaatacttttattgattaatgaaaattttaaggttgtacaag--taaatgttattgaaatataa |
116 |
Q |
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| T |
6991155 |
aataattaaatctataactaattatgggacatagttgaatacttttattgattaatgaaaattttaaggtt-tacaaaaataaatgttattgaaatataa |
6991253 |
T |
|
| Q |
117 |
atgttatttcatttttccacttgtgcttgtgagtgccaaattagttagttaaagaaattcatttagttctgtccaagactgagcatctttcaattatttg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6991254 |
atgttatttcatttttccacttgtgcttgtgagtgccaaattagttagttaaagaaattcatttagttctgtccaagactgagcatctttcaattatttg |
6991353 |
T |
|
| Q |
217 |
tgtctgt---tataatgatcgaatttattttctattagctgacctactacaaatttggtgatatgt |
279 |
Q |
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||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
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| T |
6991354 |
tgtctgttactataatgatcgaatttattttttatcagctgacctactacaaatttggtgatatgt |
6991419 |
T |
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