View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20262_low_1 (Length: 824)

Name: NF20262_low_1
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20262_low_1
NF20262_low_1
[»] chr6 (41 HSPs)
chr6 (16-793)||(11306168-11306945)
chr6 (232-737)||(12418273-12418777)
chr6 (232-737)||(12420869-12421373)
chr6 (232-738)||(23590402-23590899)
chr6 (255-760)||(23010127-23010641)
chr6 (487-784)||(20228858-20229154)
chr6 (487-784)||(22122842-22123138)
chr6 (489-702)||(25945859-25946071)
chr6 (484-670)||(11988480-11988666)
chr6 (484-670)||(31137200-31137386)
chr6 (475-670)||(7390986-7391183)
chr6 (485-670)||(25915433-25915621)
chr6 (232-331)||(11988816-11988915)
chr6 (85-200)||(17272024-17272139)
chr6 (80-205)||(19558835-19558960)
chr6 (85-229)||(6931194-6931338)
chr6 (86-217)||(14850780-14850911)
chr6 (97-229)||(14462604-14462736)
chr6 (545-671)||(17863223-17863350)
chr6 (232-324)||(25946231-25946322)
chr6 (232-306)||(31136956-31137030)
chr6 (576-664)||(10163225-10163311)
chr6 (595-671)||(20194839-20194915)
chr6 (595-671)||(22088862-22088938)
chr6 (255-312)||(23778179-23778237)
chr6 (255-324)||(7390770-7390838)
chr6 (580-664)||(13002811-13002893)
chr6 (21-78)||(30127420-30127477)
chr6 (18-78)||(33549124-33549184)
chr6 (615-670)||(18560290-18560344)
chr6 (17-79)||(12188298-12188360)
chr6 (614-664)||(16143201-16143251)
chr6 (16-61)||(17328258-17328303)
chr6 (22-78)||(10338174-10338230)
chr6 (604-668)||(12410595-12410659)
chr6 (16-79)||(1056679-1056742)
chr6 (16-75)||(14278105-14278164)
chr6 (17-79)||(13330106-13330168)
chr6 (255-324)||(18560153-18560221)
chr6 (576-664)||(24154130-24154216)
chr6 (16-57)||(24256816-24256857)
[»] chr3 (40 HSPs)
chr3 (237-780)||(16925401-16925943)
chr3 (232-678)||(8875452-8875897)
chr3 (491-704)||(13409844-13410056)
chr3 (85-217)||(7871019-7871151)
chr3 (85-200)||(44123764-44123879)
chr3 (545-670)||(22928538-22928664)
chr3 (595-666)||(16224082-16224153)
chr3 (546-671)||(16226633-16226759)
chr3 (86-217)||(2170546-2170677)
chr3 (86-217)||(9726558-9726689)
chr3 (86-217)||(23342509-23342640)
chr3 (595-670)||(13908758-13908833)
chr3 (86-217)||(13982508-13982639)
chr3 (86-216)||(13988965-13989095)
chr3 (236-319)||(14305158-14305242)
chr3 (86-206)||(13924575-13924695)
chr3 (101-217)||(20452809-20452925)
chr3 (232-306)||(13410236-13410310)
chr3 (255-337)||(13911008-13911089)
chr3 (16-60)||(28703398-28703442)
chr3 (16-60)||(39253735-39253779)
chr3 (85-172)||(21881523-21881610)
chr3 (11-73)||(10445128-10445190)
chr3 (17-79)||(32651433-32651495)
chr3 (11-64)||(8796082-8796135)
chr3 (19-79)||(30311325-30311385)
chr3 (16-79)||(4222160-4222223)
chr3 (485-524)||(13908884-13908923)
chr3 (574-664)||(15759635-15759725)
chr3 (16-79)||(16354886-16354949)
chr3 (16-79)||(27093355-27093418)
chr3 (16-79)||(46518647-46518710)
chr3 (16-79)||(53412964-53413027)
chr3 (485-523)||(16226566-16226604)
chr3 (17-79)||(37788460-37788522)
chr3 (20-78)||(47236969-47237027)
chr3 (17-78)||(2667882-2667943)
chr3 (18-79)||(14186667-14186727)
chr3 (99-172)||(15754469-15754542)
chr3 (17-78)||(30510194-30510255)
[»] chr1 (40 HSPs)
chr1 (232-758)||(33128591-33129126)
chr1 (232-745)||(21290631-21291141)
chr1 (232-784)||(4600836-4601394)
chr1 (402-760)||(18780519-18780883)
chr1 (484-707)||(10158696-10158915)
chr1 (486-670)||(18522843-18523028)
chr1 (545-670)||(22533662-22533788)
chr1 (492-656)||(25401786-25401951)
chr1 (85-207)||(40276129-40276251)
chr1 (543-704)||(20886575-20886734)
chr1 (85-229)||(29543454-29543598)
chr1 (86-226)||(26707874-26708014)
chr1 (85-193)||(27421516-27421623)
chr1 (86-217)||(15714755-15714886)
chr1 (95-200)||(26026833-26026938)
chr1 (255-328)||(20886946-20887019)
chr1 (86-197)||(33494824-33494935)
chr1 (85-229)||(22578055-22578199)
chr1 (232-339)||(25402098-25402204)
chr1 (85-144)||(3618707-3618766)
chr1 (16-79)||(10526842-10526905)
chr1 (255-324)||(22531243-22531311)
chr1 (92-132)||(27315599-27315639)
chr1 (16-79)||(6650614-6650677)
chr1 (16-79)||(8177176-8177239)
chr1 (16-79)||(9165189-9165252)
chr1 (16-79)||(33700767-33700830)
chr1 (16-79)||(36371489-36371552)
chr1 (676-745)||(20146975-20147044)
chr1 (20-77)||(27223128-27223185)
chr1 (16-60)||(2799900-2799944)
chr1 (19-75)||(15786317-15786373)
chr1 (16-60)||(40810505-40810549)
chr1 (16-59)||(3265963-3266006)
chr1 (16-79)||(4566567-4566630)
chr1 (85-172)||(18536943-18537030)
chr1 (17-79)||(6122813-6122875)
chr1 (16-61)||(1247150-1247195)
chr1 (20-77)||(4824992-4825049)
chr1 (99-172)||(37360922-37360995)
[»] chr8 (50 HSPs)
chr8 (252-760)||(24477449-24477957)
chr8 (232-740)||(22263968-22264478)
chr8 (609-784)||(22815067-22815242)
chr8 (581-775)||(22739060-22739254)
chr8 (485-670)||(9006973-9007158)
chr8 (422-585)||(22738260-22738423)
chr8 (232-420)||(22735004-22735193)
chr8 (485-670)||(17983403-17983588)
chr8 (486-670)||(921038-921222)
chr8 (490-670)||(23818201-23818384)
chr8 (492-670)||(15927375-15927553)
chr8 (85-229)||(8508286-8508430)
chr8 (545-671)||(24093165-24093292)
chr8 (541-671)||(12149240-12149368)
chr8 (232-306)||(920792-920866)
chr8 (232-314)||(9007325-9007406)
chr8 (97-217)||(10737696-10737817)
chr8 (545-662)||(21302058-21302176)
chr8 (232-306)||(23818563-23818637)
chr8 (18-79)||(3624599-3624660)
chr8 (576-664)||(15340884-15340970)
chr8 (576-664)||(15429949-15430035)
chr8 (576-664)||(15521253-15521339)
chr8 (258-307)||(22602489-22602538)
chr8 (234-298)||(17931340-17931404)
chr8 (255-314)||(15926874-15926932)
chr8 (615-670)||(23242341-23242396)
chr8 (633-670)||(21285056-21285093)
chr8 (18-78)||(968382-968442)
chr8 (232-328)||(17983741-17983836)
chr8 (16-79)||(6536539-6536602)
chr8 (20-79)||(16852359-16852418)
chr8 (16-79)||(18540317-18540380)
chr8 (20-79)||(19703485-19703544)
chr8 (255-322)||(21284759-21284825)
chr8 (16-79)||(35690058-35690121)
chr8 (255-337)||(12148956-12149037)
chr8 (99-172)||(30716189-30716262)
chr8 (18-78)||(22193360-22193420)
chr8 (20-79)||(2203511-2203570)
chr8 (19-78)||(3058046-3058105)
chr8 (16-51)||(3174799-3174834)
chr8 (16-79)||(8794339-8794402)
chr8 (17-79)||(11819795-11819857)
chr8 (473-523)||(21302200-21302250)
chr8 (20-78)||(28783080-28783138)
chr8 (11-57)||(31843830-31843876)
chr8 (16-74)||(33017238-33017296)
chr8 (17-78)||(27750750-27750811)
chr8 (99-172)||(30723912-30723985)
[»] chr7 (52 HSPs)
chr7 (423-784)||(15125069-15125429)
chr7 (255-740)||(17132516-17132989)
chr7 (232-760)||(7404139-7404661)
chr7 (258-740)||(17140124-17140593)
chr7 (479-725)||(14961159-14961403)
chr7 (479-725)||(15390631-15390875)
chr7 (484-667)||(9560337-9560521)
chr7 (574-670)||(12331004-12331100)
chr7 (484-670)||(10309899-10310088)
chr7 (485-670)||(18098279-18098465)
chr7 (86-225)||(17620917-17621056)
chr7 (86-226)||(44658865-44659005)
chr7 (86-217)||(32146611-32146742)
chr7 (86-217)||(16646556-16646687)
chr7 (86-229)||(20119274-20119417)
chr7 (85-229)||(34324480-34324620)
chr7 (232-323)||(15125430-15125522)
chr7 (557-670)||(14943058-14943172)
chr7 (557-670)||(15370651-15370765)
chr7 (562-647)||(20923363-20923449)
chr7 (469-671)||(17880957-17881162)
chr7 (577-664)||(11064206-11064294)
chr7 (249-324)||(14961557-14961632)
chr7 (249-324)||(15391029-15391104)
chr7 (16-79)||(26459404-26459467)
chr7 (232-306)||(18098031-18098105)
chr7 (17-79)||(39631863-39631925)
chr7 (232-389)||(21668726-21668882)
chr7 (85-142)||(26458574-26458631)
chr7 (104-217)||(42164155-42164268)
chr7 (255-306)||(9560113-9560164)
chr7 (16-79)||(33222389-33222452)
chr7 (86-136)||(572622-572672)
chr7 (232-306)||(12331363-12331437)
chr7 (255-337)||(14943390-14943471)
chr7 (255-337)||(15370983-15371064)
chr7 (17-79)||(43215203-43215265)
chr7 (19-79)||(30442507-30442567)
chr7 (85-172)||(342266-342353)
chr7 (20-78)||(22760883-22760941)
chr7 (86-197)||(42207048-42207163)
chr7 (25-78)||(7801200-7801253)
chr7 (18-78)||(14058273-14058333)
chr7 (18-78)||(14368301-14368361)
chr7 (20-79)||(7499922-7499981)
chr7 (16-79)||(7721388-7721451)
chr7 (16-79)||(7744106-7744169)
chr7 (475-522)||(11064351-11064398)
chr7 (473-512)||(12088483-12088522)
chr7 (17-79)||(23552137-23552199)
chr7 (20-78)||(43590927-43590985)
chr7 (18-79)||(17041008-17041069)
[»] chr2 (55 HSPs)
chr2 (232-784)||(11323645-11324186)
chr2 (485-696)||(20478170-20478378)
chr2 (492-726)||(13821934-13822165)
chr2 (541-726)||(27597709-27597891)
chr2 (233-567)||(25568175-25568507)
chr2 (542-670)||(27189979-27190108)
chr2 (542-670)||(27839793-27839922)
chr2 (86-226)||(1523868-1524008)
chr2 (485-648)||(22802969-22803133)
chr2 (86-217)||(634415-634546)
chr2 (98-229)||(7386699-7386829)
chr2 (86-217)||(7911858-7911989)
chr2 (86-217)||(14896916-14897047)
chr2 (97-200)||(19087578-19087681)
chr2 (86-217)||(22428479-22428610)
chr2 (95-166)||(25228964-25229035)
chr2 (545-670)||(23780708-23780834)
chr2 (232-314)||(19279660-19279742)
chr2 (104-217)||(26697265-26697378)
chr2 (86-226)||(22434078-22434218)
chr2 (86-217)||(14888850-14888981)
chr2 (86-229)||(16445247-16445389)
chr2 (86-217)||(43775128-43775259)
chr2 (545-670)||(25576727-25576852)
chr2 (634-735)||(25568508-25568609)
chr2 (232-320)||(27597416-27597503)
chr2 (232-306)||(20477925-20477999)
chr2 (97-229)||(21291469-21291594)
chr2 (255-325)||(27189695-27189764)
chr2 (255-325)||(27839509-27839578)
chr2 (19-79)||(42327392-42327452)
chr2 (595-706)||(31404072-31404181)
chr2 (605-664)||(28760652-28760711)
chr2 (20-79)||(29503290-29503349)
chr2 (16-79)||(40416384-40416447)
chr2 (17-79)||(19322787-19322849)
chr2 (545-642)||(25597589-25597687)
chr2 (20-78)||(37480095-37480153)
chr2 (99-172)||(19439506-19439579)
chr2 (99-172)||(25447032-25447105)
chr2 (18-74)||(4262298-4262354)
chr2 (575-662)||(28140111-28140199)
chr2 (16-79)||(42922433-42922497)
chr2 (100-135)||(9923771-9923806)
chr2 (16-79)||(11251106-11251169)
chr2 (20-78)||(22382237-22382293)
chr2 (20-78)||(22914263-22914319)
chr2 (232-307)||(23781070-23781145)
chr2 (475-522)||(27850745-27850792)
chr2 (101-172)||(43289362-43289433)
chr2 (17-59)||(6859307-6859349)
chr2 (20-78)||(23052521-23052579)
chr2 (20-78)||(39715012-39715070)
chr2 (16-77)||(19244130-19244191)
chr2 (18-79)||(42602573-42602634)
[»] scaffold0501 (1 HSPs)
scaffold0501 (232-740)||(8568-9072)
[»] scaffold0502 (1 HSPs)
scaffold0502 (236-768)||(11896-12424)
[»] scaffold0009 (4 HSPs)
scaffold0009 (399-775)||(269508-269883)
scaffold0009 (486-707)||(222655-222875)
scaffold0009 (545-668)||(50425-50549)
scaffold0009 (234-306)||(223051-223123)
[»] scaffold0056 (3 HSPs)
scaffold0056 (232-760)||(54109-54645)
scaffold0056 (600-670)||(20487-20557)
scaffold0056 (232-307)||(20162-20237)
[»] scaffold0004 (5 HSPs)
scaffold0004 (572-770)||(357766-357963)
scaffold0004 (232-524)||(357479-357769)
scaffold0004 (86-217)||(347568-347699)
scaffold0004 (545-671)||(377033-377160)
scaffold0004 (225-306)||(378687-378768)
[»] chr5 (39 HSPs)
chr5 (402-760)||(16075511-16075875)
chr5 (484-729)||(17987467-17987710)
chr5 (541-745)||(23779048-23779253)
chr5 (541-745)||(23866001-23866206)
chr5 (608-736)||(25369156-25369284)
chr5 (474-696)||(24923896-24924115)
chr5 (485-670)||(22806315-22806501)
chr5 (85-229)||(18085064-18085208)
chr5 (86-226)||(30959406-30959546)
chr5 (86-226)||(1533550-1533690)
chr5 (100-217)||(17936340-17936461)
chr5 (86-217)||(28368877-28369008)
chr5 (86-229)||(31105800-31105943)
chr5 (484-671)||(22969328-22969518)
chr5 (232-322)||(24923671-24923760)
chr5 (485-671)||(22011119-22011308)
chr5 (485-670)||(22703486-22703674)
chr5 (255-324)||(17987865-17987934)
chr5 (85-229)||(26461101-26461245)
chr5 (232-337)||(22806646-22806750)
chr5 (232-339)||(22011452-22011558)
chr5 (545-662)||(36196628-36196746)
chr5 (232-312)||(16075966-16076047)
chr5 (232-324)||(22703238-22703328)
chr5 (575-661)||(25769778-25769865)
chr5 (17-79)||(26078046-26078108)
chr5 (16-80)||(14285179-14285243)
chr5 (624-667)||(17810741-17810784)
chr5 (16-79)||(25627076-25627139)
chr5 (16-79)||(34984825-34984888)
chr5 (16-78)||(16773827-16773889)
chr5 (99-172)||(21173159-21173232)
chr5 (99-172)||(23055347-23055420)
chr5 (99-167)||(16671620-16671688)
chr5 (97-137)||(18786543-18786583)
chr5 (16-60)||(43442234-43442278)
chr5 (20-79)||(30883196-30883255)
chr5 (99-149)||(35266537-35266587)
chr5 (576-664)||(31533003-31533089)
[»] scaffold0338 (2 HSPs)
scaffold0338 (485-707)||(17245-17463)
scaffold0338 (232-302)||(17638-17708)
[»] scaffold0170 (1 HSPs)
scaffold0170 (475-704)||(1292-1511)
[»] chr4 (40 HSPs)
chr4 (475-670)||(12809851-12810048)
chr4 (85-229)||(2926031-2926175)
chr4 (85-229)||(13998061-13998209)
chr4 (544-670)||(14632688-14632815)
chr4 (85-229)||(12750716-12750861)
chr4 (535-670)||(18558336-18558473)
chr4 (545-668)||(11888135-11888259)
chr4 (86-217)||(20194488-20194619)
chr4 (110-229)||(22747146-22747265)
chr4 (85-217)||(19568589-19568721)
chr4 (104-217)||(53980246-53980359)
chr4 (545-671)||(10070606-10070733)
chr4 (16-79)||(37109345-37109408)
chr4 (255-337)||(14632401-14632482)
chr4 (18-78)||(49576890-49576950)
chr4 (17-79)||(23377975-23378037)
chr4 (232-337)||(10070940-10071044)
chr4 (258-319)||(12809637-12809697)
chr4 (16-76)||(7949448-7949508)
chr4 (16-79)||(38869787-38869850)
chr4 (17-79)||(7292793-7292855)
chr4 (17-79)||(7539609-7539671)
chr4 (11-73)||(37274448-37274510)
chr4 (85-143)||(47592199-47592257)
chr4 (99-172)||(1892524-1892597)
chr4 (99-172)||(12661159-12661232)
chr4 (11-79)||(1730478-1730546)
chr4 (11-79)||(10047999-10048067)
chr4 (18-78)||(24234665-24234725)
chr4 (575-656)||(12424819-12424896)
chr4 (16-79)||(16581712-16581775)
chr4 (16-79)||(19680782-19680845)
chr4 (85-172)||(23192186-23192273)
chr4 (85-172)||(25693145-25693232)
chr4 (16-79)||(31759652-31759715)
chr4 (485-523)||(14632628-14632666)
chr4 (20-78)||(55427198-55427256)
chr4 (16-73)||(2622389-2622446)
chr4 (99-172)||(16330605-16330678)
chr4 (152-229)||(26995353-26995430)
[»] scaffold0020 (1 HSPs)
scaffold0020 (85-229)||(111094-111238)
[»] scaffold0088 (1 HSPs)
scaffold0088 (255-614)||(40017-40377)
[»] scaffold0005 (2 HSPs)
scaffold0005 (485-670)||(184477-184664)
scaffold0005 (255-337)||(184810-184891)
[»] scaffold0062 (3 HSPs)
scaffold0062 (86-229)||(18027-18170)
scaffold0062 (86-229)||(28195-28338)
scaffold0062 (86-229)||(38360-38503)
[»] scaffold0054 (2 HSPs)
scaffold0054 (232-340)||(76667-76777)
scaffold0054 (675-784)||(77004-77112)
[»] scaffold0099 (2 HSPs)
scaffold0099 (568-669)||(37148-37248)
scaffold0099 (239-315)||(36807-36884)
[»] scaffold0065 (1 HSPs)
scaffold0065 (487-620)||(14603-14736)
[»] scaffold0031 (2 HSPs)
scaffold0031 (474-630)||(38349-38506)
scaffold0031 (239-302)||(38672-38735)
[»] scaffold0001 (1 HSPs)
scaffold0001 (232-313)||(61901-61982)
[»] scaffold0328 (1 HSPs)
scaffold0328 (233-312)||(18013-18092)
[»] scaffold0059 (3 HSPs)
scaffold0059 (545-668)||(29317-29441)
scaffold0059 (485-515)||(29473-29503)
scaffold0059 (232-306)||(29679-29753)
[»] scaffold0180 (1 HSPs)
scaffold0180 (16-79)||(19956-20019)
[»] scaffold0169 (1 HSPs)
scaffold0169 (86-140)||(16817-16871)
[»] scaffold0210 (4 HSPs)
scaffold0210 (595-664)||(18292-18361)
scaffold0210 (595-664)||(26184-26253)
scaffold0210 (475-522)||(18434-18481)
scaffold0210 (475-522)||(26326-26373)
[»] scaffold0258 (1 HSPs)
scaffold0258 (18-78)||(15319-15379)
[»] scaffold1587 (1 HSPs)
scaffold1587 (255-302)||(1394-1441)
[»] scaffold1156 (1 HSPs)
scaffold1156 (258-324)||(853-918)
[»] scaffold0299 (1 HSPs)
scaffold0299 (16-78)||(11548-11610)
[»] scaffold0291 (1 HSPs)
scaffold0291 (20-78)||(2468-2526)
[»] scaffold0014 (1 HSPs)
scaffold0014 (99-172)||(109988-110061)
[»] scaffold0194 (1 HSPs)
scaffold0194 (18-78)||(13042-13102)
[»] scaffold0102 (1 HSPs)
scaffold0102 (96-229)||(10121-10246)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-78)||(38898-38958)
[»] scaffold0431 (1 HSPs)
scaffold0431 (575-656)||(5079-5156)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-79)||(94965-95028)
[»] scaffold0238 (1 HSPs)
scaffold0238 (16-57)||(2705-2746)


Alignment Details
Target: chr6 (Bit Score: 734; Significance: 0; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 734; E-Value: 0
Query Start/End: Original strand, 16 - 793
Target Start/End: Original strand, 11306168 - 11306945
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccactcattgagataaatcgtgaaagaatattgggaaaata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  11306168 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacaactcattgagataaatcgtgaaagaatattggaaaaata 11306267  T
Q  116 tatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgtttttcaaatatt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11306268 tatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccattagactgattatcaattgatggattcgtttttcaaatatt 11306367  T
Q  216 agaaggagataatacggttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttctt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  11306368 agaaggagataatacggttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttgctttgcaggaatcgaagagctttctc 11306467  T
Q  316 atttcaattggagaatctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagc 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11306468 atttcaattggagaatctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcgcgtcgaagacaagc 11306567  T
Q  416 aaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatg 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11306568 aaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatg 11306667  T
Q  516 ggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaacta 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11306668 ggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaacta 11306767  T
Q  616 ccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagttt 715  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  11306768 ccggcgtctagggaaacgagttatacagaatgtatgtaaactgatttgtagaccaccccttttattttaatgcattgcattctaccttttccatgagttt 11306867  T
Q  716 acgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaactcaaacttgtcgagaaacactgtc 793  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  11306868 acgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaactcaaacctgtcgagaaacagtgtc 11306945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 232 - 737
Target Start/End: Complemental strand, 12418777 - 12418273
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||| ||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||  ||||| ||||||||     
T  12418777 gttaacctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcgaaaagctttctattttcatttggagaaa 12418678  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 431  Q
    ||||||  |   | || |||    |||||||   || |||||||  ||  ||||| || ||| | |  | |||||||| ||| |||||| || |||||||    
T  12418677 ctcgacagaatatcaagcctggaccgcataacaagattttcgacagagcgaggctcaaggagtaattacgcgtcgaagtcaatcaaaagggcaggaaaac 12418578  T
Q  432 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctct 531  Q
    ||||| |||| || | |  | |||||    |||| ||| |  |||||||   ||||||| ||||||||||||||| |||||||||  |||||   || |     
T  12418577 acgatttcaatcattaaaacggtttcaaggtagt-gaagacatgggacatgcagttgtctaagatggaggaagtgctgatcatggagttagttgttcgcc 12418479  T
Q  532 atctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaa 631  Q
    |||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  12418478 atctaggtttttagtataaatagtagtttccaagccggaaagtgggtcgcaaatcatatacagaattctacaacactcaaactaacgacgtctagggaaa 12418379  T
Q  632 tgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattac 731  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||||||||| |||||||||||||||||| |||     
T  12418378 cgagttatacagaatgtatgtaaactgatttgtagaccaccccttttattttaatgcaatgcattttaccttttccttgagtttacgtgcgtaaacttat 12418279  T
Q  732 ttttat 737  Q
    ||||||    
T  12418278 ttttat 12418273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 232 - 737
Target Start/End: Original strand, 12420869 - 12421373
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||| ||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||  ||||| ||||||||     
T  12420869 gttaacctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcgaaaagctttctattttcatttggagaaa 12420968  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 431  Q
    ||||||  |   | || |||    |||||||   || |||||||  ||  ||||| || ||| | |  | |||||||| ||| |||||| || |||||||    
T  12420969 ctcgacagaatatcaagcctggaccgcataacaagattttcgacagagcgaggctcaaggagtaattacgcgtcgaagtcaatcaaaagggcaggaaaac 12421068  T
Q  432 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctct 531  Q
    ||||| |||| || | |  | |||||    |||| ||| |  |||||||   ||||||| ||||||||||||||| |||||||||  |||||   || |     
T  12421069 acgatttcaatcattaaaacggtttcaaggtagt-gaagacatgggacatgcagttgtctaagatggaggaagtgctgatcatggagttagttgttcgcc 12421167  T
Q  532 atctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaa 631  Q
    |||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  12421168 atctaggtttttagtataaatagtagtttccaagccggaaagtgggtcgcaaatcatatacagaattctacaacactcaaactaacgacgtctagggaaa 12421267  T
Q  632 tgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattac 731  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||||||||| |||||||||||||||||| |||     
T  12421268 cgagttatacagaatgtatgtaaactgatttgtagaccaccccttttattttaatgcaatgcattttaccttttccttgagtttacgtgcgtaaacttat 12421367  T
Q  732 ttttat 737  Q
    ||||||    
T  12421368 ttttat 12421373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 232 - 738
Target Start/End: Original strand, 23590402 - 23590899
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||| |||||||||||   |||||||||||||| || ||||||||||||||||| |||||||||||||||||| ||||| |||| ||||| |||||    
T  23590402 gttagcctctaaatttaacac--tcatttaatatggttgatatttgtttgaccttttattttgcaggaatcgaagagttttctcattttaattgaagaat 23590499  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 431  Q
    |||||| || | |||| |||| |||||||| |  || ||||||||||| ||||||||||||||| |||| ||||||||  || |||||| |||||||| |    
T  23590500 ctcgacaaaacattaagcctagggcgcatagtcagaatttcgacgaagcaaggctgaaagagcaatctcgcgtcgaagttaaacaaaag-gcgggaaagc 23590598  T
Q  432 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctct 531  Q
    ||||| ||||||| |||  | |||||  | |||| ||    |||| | |   ||||||||| ||||||||||||| |||| |||   |||| |  || |     
T  23590599 acgatttcaagcattgaaacggtttctatgtagtgga----gtgg-ataggcagttgtccaggatggaggaagtgctgataatgaagttagaggttcgcc 23590693  T
Q  532 atctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaa 631  Q
    |||||| | ||| |||||||||  ||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  23590694 atctagat-tttggtataaataagagtttccaagccggatagtggatcgcaaatcatatacagaattctacaacactcaaactactagcgtctagggaaa 23590792  T
Q  632 tgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattac 731  Q
     ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| || |||||| |||||||||  |||||||||||||| ||| ||||    
T  23590793 cgagttatacagaatgtatgtaaattgaattgtagaccaccccttttattttaatgcaatgcattttaccttttctttgagtttacgtgcgcaaacttac 23590892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 255 - 760
Target Start/End: Original strand, 23010127 - 23010641
Alignment:
Q  255 tcatttaatatggtcgacatttgttt-gaccttttactttgcaggaatcgaagagctttcttatttcaattgga-gaatct-cgacgaagctttaaacct 351  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||   | ||||| |||| ||| || ||||||||| | || |||    
T  23010127 tcatttaatatggtcgacatatgtttagaccattaactttgcaggaatcgaagagcttttcgaattcaaatggaagaagcttcgacgaagcatcaagcct 23010226  T
Q  352 aaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggc 451  Q
    ||||||||| ||| | ||| |||| | ||||||| |  |||||| |  | ||| ||||||||||||||  |||||||  |||||| ||||||| |||  |    
T  23010227 aaggcgcatgatttgtgtt-cgacaatgtaaggccgggagagcagttacgcgttgaagacaagcaaaatggcgggaag-cacgat-tcaagcagtgaaac 23010323  T
Q  452 agtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctag--ttatttagtata 549  Q
    |||||||||| ||| || |||||||| ||||| ||||||||| |||||||||||| |||||||||  ||||||   | | || |||  || |||||||||    
T  23010324 agtttccttt-agtggagaatgtggggcaaatggttgtccaaaatggaggaagtgctgatcatggagttagtgttccaccatttagggttttttagtata 23010422  T
Q  550 aatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgta 649  Q
    ||||||||||||||||||| ||||  |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  23010423 aatagtagtttccaagccggaaagaaggtcacaaatcatatatagaattctacaacactcaaactacaggcgtctagggatttgagttatacagaatgta 23010522  T
Q  650 tgtaaactgatttgtagaccatcccttttattttaattcattgcattctacctttt-ccatgagtttacgtgcgtaaaatta-------cttttatcttg 741  Q
    |  |||||||||| ||||||| || |||||||||||| ||||||||| ||| |||| || ||| ||||||| |||||| |||       |||||||||||    
T  23010523 taaaaactgatttttagaccacccgttttattttaatgcattgcattttactttttcccttgattttacgttcgtaaacttacttttatcttttatcttg 23010622  T
Q  742 ctttattttaagcttttta 760  Q
    |||||||||||||||||||    
T  23010623 ctttattttaagcttttta 23010641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 487 - 784
Target Start/End: Complemental strand, 20229154 - 20228858
Alignment:
Q  487 tgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatc 586  Q
    |||||||||| |||||||||||||||||| ||||||||  || | |||||||| ||||||| ||||||||||| || ||||  |||||||||||||||||    
T  20229154 tgtccaagattgaggaagtgttgatcatgagcttagtggttcgccatctagttttttagtagaaatagtagttccctagccagaaagtgggtcgcaaatc 20229055  T
Q  587 atataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaat 686  Q
    ||||| | ||||||| |||||| ||||||| || |||||| || | |||||||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  20229054 atatacacaattctaaaacactgaaactactggggtctagagagacgagttatatagaatgcatgtaaactgatttgtagaccaccccttttattttaat 20228955  T
Q  687 tcattgcattctaccttttccatgagtttacgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaactcaaacttgtcgaga 784  Q
     |  |||||| ||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||  |||||||    
T  20228954 gctatgcattttactttttccttgagtttacatgcgtaaacttacttttatcttgctttattttaag-attttacttgcaaattcaaacccgtcgaga 20228858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 487 - 784
Target Start/End: Complemental strand, 22123138 - 22122842
Alignment:
Q  487 tgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatc 586  Q
    |||||||||| |||||||||||||||||| ||||||||  || | |||||||| ||||||| ||||||||||| || ||||  |||||||||||||||||    
T  22123138 tgtccaagattgaggaagtgttgatcatgagcttagtggttcgccatctagttttttagtagaaatagtagttccctagccagaaagtgggtcgcaaatc 22123039  T
Q  587 atataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaat 686  Q
    ||||| | ||||||| |||||| ||||||| || |||||| || | |||||||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  22123038 atatacacaattctaaaacactgaaactactggggtctagagagacgagttatatagaatgcatgtaaactgatttgtagaccaccccttttattttaat 22122939  T
Q  687 tcattgcattctaccttttccatgagtttacgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaactcaaacttgtcgaga 784  Q
     |  |||||| ||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||  |||||||    
T  22122938 gctatgcattttactttttccttgagtttacatgcgtaaacttacttttatcttgctttattttaag-attttacttgcaaattcaaacccgtcgaga 22122842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 489 - 702
Target Start/End: Complemental strand, 25946071 - 25945859
Alignment:
Q  489 tccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaagtgggtcgcaaatca 587  Q
    ||||||||||| |||||| | |||||||| ||||||  || | |  ||| ||||| ||||||||||   |||||||||||  ||| ||||||||||||||    
T  25946071 tccaagatggaagaagtgcttatcatgggattagtggttcaccagttaggtattttagtataaataagtgtttccaagcctgaaaatgggtcgcaaatca 25945972  T
Q  588 tataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaatt 687  Q
    | || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||  |||||  |||||||     
T  25945971 tttatagaattctacaacactcaaactaccggcgtctagggaaacgagttatacggaatgtatgtaaactgatttgtagacca--cctttatttttaatg 25945874  T
Q  688 cattgcattctacct 702  Q
    || |||||| |||||    
T  25945873 caatgcattttacct 25945859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 484 - 670
Target Start/End: Complemental strand, 11988666 - 11988480
Alignment:
Q  484 agttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    |||||||||| || || ||||||||||||||||| ||||||  || |||  ||| | |||||||||||||   |||||||||||| ||| |||| | |||    
T  11988666 agttgtccaaaattgaagaagtgttgatcatggggttagtggttcgctagttaggtttttagtataaataagtgtttccaagccggaaaatgggccacaa 11988567  T
Q  584 atcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||    
T  11988566 atcatttatagaattctacaacactcaaactaccggcgtctaaggaaacgagttatacagaatgtatataaattgatttgtagacca 11988480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 484 - 670
Target Start/End: Original strand, 31137200 - 31137386
Alignment:
Q  484 agttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    |||||||| |||||||||||||||||||||||||  ||  |  |  | |  ||| | ||||||| |||||   |||| ||||| | ||| ||||||||||    
T  31137200 agttgtcctagatggaggaagtgttgatcatggggctaacggtttgccagttaggtttttagtacaaataagtgtttacaagctggaaaatgggtcgcaa 31137299  T
Q  584 atcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||||||| | |||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31137300 atcatatacataattctacaacattcaaactacatgcgtctagggaaatgagttatatagaatgtatgtaaactgatttgtagacca 31137386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 475 - 670
Target Start/End: Original strand, 7390986 - 7391183
Alignment:
Q  475 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaag 573  Q
    |||||||  ||||||||||||| ||| |||||||||| ||| | ||||||  ||   |  ||||||||| ||||||||||   ||||||||| || |||     
T  7390986 gggacaagcagttgtccaagatagagaaagtgttgattatgagattagtggttcgtcagttagttattttagtataaataagtgtttccaagtcggaaaa 7391085  T
Q  574 tgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||||||||| |||| || |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  7391086 tgggtcgcaagtcatttatagaaattctacaacactcaaactaccagcgtctagggaaacgagttatacagaatatacgtaaactgatttgtagacca 7391183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 485 - 670
Target Start/End: Complemental strand, 25915621 - 25915433
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttat-ttag-tataaatagtagtttccaagccgaaaagtgggtcgca 582  Q
    |||||||||||||||| |||||||||||||||| ||||||  |  | |  || || | |||| ||||||||  |||||||||| || ||| |||||||||    
T  25915621 gttgtccaagatggagaaagtgttgatcatgggattagtgttttgccagttatttttcttaggtataaataagagtttccaagtcggaaaatgggtcgca 25915522  T
Q  583 aatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||||| || |||| |||| ||||||||||||||| | ||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  25915521 aatcatttatagaaattcttcaacactcaaactactgacgtataggaaaacgagttatacagaatgtatgtaaactgatttgtagacca 25915433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 232 - 331
Target Start/End: Complemental strand, 11988915 - 11988816
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||||||| ||  ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  11988915 gttagcctgtaatttcgacaggctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcaaagagctttctcatttcaattggagaat 11988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 17272139 - 17272024
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||  |||||||||| ||| ||  || |||||    
T  17272139 agataaatcttgaaagaatattggaaaaatatatttgatatgaatctccatctatcattaattatgctgagcaaacttatttacagctcagtaggctgat 17272040  T
Q  185 tatcaattgatggatt 200  Q
    ||||||||||| ||||    
T  17272039 tatcaattgattgatt 17272024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 19558960 - 19558835
Alignment:
Q  80 cattgagataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataaga 179  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||||| |||| |  |||  ||     
T  19558960 cattaagataaatcatgaaagaatattgggaaaatatatttgatatgaatctccatctatcattaattgtattgagccaacttgtttacaatccagtagg 19558861  T
Q  180 ctgattatcaattgatggattcgttt 205  Q
     |||||||||||| ||||||| ||||    
T  19558860 ttgattatcaattaatggattagttt 19558835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 6931194 - 6931338
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||| || |||| |  |||| ||||||||||| || | |  ||||||||    
T  6931194 agataaatcttgaaagaatattggaaaaacatatttgatatgaatctccatctattataaattatattgagccaacttatttacagactagtagactgat 6931293  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||||  |||| | ||||||||  ||||||||||    
T  6931294 tatcaattgatggattaattttcccaatattagggggagataata 6931338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 14850780 - 14850911
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  14850780 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 14850879  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  14850880 atcaattgatggtttggttttcccaatattag 14850911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 14462736 - 14462604
Alignment:
Q  97 aaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatg 196  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||||||||| | |  |||| ||||||||||| |||| |  || ||||||||||||||||     
T  14462736 aaagaatattaagaaaaaatatttgatatgaatctccatctatcattaactttattgagccaacttatttacagcctagtaggctgattatcaattgata 14462637  T
Q  197 gattcgtttttcaaatattagaaggagataata 229  Q
    |||| ||||||| ||||| ||  ||||||||||    
T  14462636 gattagtttttccaatatcagggggagataata 14462604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 545 - 671
Target Start/End: Original strand, 17863223 - 17863350
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| || || ||| ||| ||||| ||||| || |||| |||||||||||||||||||||| ||  || | ||| |||||||||||    
T  17863223 gtataaataagagtttcctagtcggaaaatggctcgcacatcatttatagaaattctacaacactcaaactaccgacgcatatgaaaaagagttatacag 17863322  T
Q  644 aatgtatgtaaactgatttgtagaccat 671  Q
    ||||||||||||| ||| ||||||||||    
T  17863323 aatgtatgtaaacagatatgtagaccat 17863350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 25946322 - 25946231
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    |||||||||||| ||  ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||| |||||    
T  25946322 gttagcctgtaatttcgacaggctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcaaag-gctttctcattacaatt 25946231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 31136956 - 31137030
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||||| |||||| |||||  |||||||||||| || |||||||||||||||||||||||||| |||| ||||    
T  31136956 gttagcctttaaattcaacaggctcatttaatatgatcaacatttgtttgaccttttactttgcaagaattgaag 31137030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 576 - 664
Target Start/End: Original strand, 10163225 - 10163311
Alignment:
Q  576 ggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||||||| || |||||||||   |||||||| |||| |||||||| |||| |||| ||| |||||||||||||||||||||||    
T  10163225 ggtcgcaaatcatttatagaattctag--cactcaaagtaccagcgtctagagaaaagagtcatatagaatgtatgtaaactgatttgt 10163311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 595 - 671
Target Start/End: Complemental strand, 20194915 - 20194839
Alignment:
Q  595 aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccat 671  Q
    |||||||||||||| |||||| ||| |||||| || | |||||||||| |||||| ||||| |||||||||||||||    
T  20194915 aattctacaacacttaaactatcggtgtctagagacacgagttatacataatgtaagtaaattgatttgtagaccat 20194839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 595 - 671
Target Start/End: Complemental strand, 22088938 - 22088862
Alignment:
Q  595 aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccat 671  Q
    |||||||||||||| |||||| ||| |||||| || | |||||||||| |||||| ||||| |||||||||||||||    
T  22088938 aattctacaacacttaaactatcggtgtctagagacacgagttatacataatgtaagtaaattgatttgtagaccat 22088862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 23778237 - 23778179
Alignment:
Q  255 tcatttaatatggtcgacatttgttt-gaccttttactttgcaggaatcgaagagcttt 312  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  23778237 tcatttaatatggtcgacatatgtttagaccattaactttgcaggaatcgaagagcttt 23778179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 7390770 - 7390838
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    ||||||||||||||| || |||||||||||||| ||||||||||||||  ||| |||||| |||||||||    
T  7390770 tcatttaatatggtcaacgtttgtttgacctttaactttgcaggaatcagaga-ctttctcatttcaatt 7390838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 664
Target Start/End: Original strand, 13002811 - 13002893
Alignment:
Q  580 gcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||| || |||||||||   ||||| || ||||| ||||||| |||| |||| |||||||||||||||||||||||||||    
T  13002811 gcaaatcatttatagaattctag--cactcgaagtaccgacgtctagagaaaagagtcatacagaatgtatgtaaactgatttgt 13002893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 30127477 - 30127420
Alignment:
Q  21 agaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||| ||||| ||||| |||||||| ||| |||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccac 30127420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 33549184 - 33549124
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||||||||||||||||||||| || || ||||| ||||||||| || |||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 33549124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 615 - 670
Target Start/End: Original strand, 18560290 - 18560344
Alignment:
Q  615 accggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||| ||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  18560290 accgacgtttagggaaatgagttatacag-atgtaggtaaactgatttgtagacca 18560344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 12188298 - 12188360
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||| ||| ||||||| || ||||| ||||||||| || ||||||||||||||    
T  12188298 agagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccact 12188360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 614 - 664
Target Start/End: Complemental strand, 16143251 - 16143201
Alignment:
Q  614 taccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||||||| |||| |||||||| ||||||||||||| |||||||||    
T  16143251 taccggcgtctagagaaaagagttatatagaatgtatgtaatctgatttgt 16143201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 17328258 - 17328303
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccagg 61  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  17328258 cagagagaatcgaacctgaaaccttgaagaggagcatactctcagg 17328303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 10338174 - 10338230
Alignment:
Q  22 gaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||| || ||||| ||||| ||| || |||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 10338230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 668
Target Start/End: Complemental strand, 12410659 - 12410595
Alignment:
Q  604 acactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagac 668  Q
    |||||||||||| ||| ||| ||| ||| ||||||| || |||||||||||||| ||||||||||    
T  12410659 acactcaaactatcggtgtcgaggaaaacgagttatgcataatgtatgtaaactaatttgtagac 12410595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 1056679 - 1056742
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||| | | ||||||| |||||||||||||||| | || | ||||||||||||    
T  1056679 cagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccact 1056742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 14278105 - 14278164
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatac 75  Q
    ||||||||||| ||||||||||||| | || ||||  ||||||||| |||||||||||||    
T  14278105 cagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaatac 14278164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 13330168 - 13330106
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||| |||||||||||| || |||| |||||||| |  ||||| ||||||||||    
T  13330168 agagagaatcgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaataccact 13330106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 18560153 - 18560221
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    ||||||||||||||| ||||||||||||  ||| | ||||||||||| ||||| |||||| |||| ||||    
T  18560153 tcatttaatatggtcaacatttgtttgaattttaattttgcaggaattgaaga-ctttctcattttaatt 18560221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 664
Target Start/End: Original strand, 24154130 - 24154216
Alignment:
Q  576 ggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||||||| |  |||||||||   ||||| || ||||| ||||||  |||| |||| ||||| |||||||||||||||||||||    
T  24154130 ggtcgcaaatcatttgtagaattctag--cactcgaagtaccgacgtctaaagaaaagagtcatacaaaatgtatgtaaactgatttgt 24154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 24256816 - 24256857
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcc 57  Q
    ||||||||||||||| |||||||||||  |||||||||||||    
T  24256816 cagagagaatcgaacttgagaccttgagaatgagcatactcc 24256857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 341; Significance: 0; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 237 - 780
Target Start/End: Complemental strand, 16925943 - 16925401
Alignment:
Q  237 cctgtaaatttaacagaatcatttaatatggtcgacatttgtttgacctttta-ctttgcaggaatcgaagagctttcttatttcaattggagaatctcg 335  Q
    ||||||||||| ||||  || ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||||||| ||||| |||    
T  16925943 cctgtaaatttcacaggctcgtttaatatggtcgacatttttttgacctttttgctttgcaggaatcgaagagctttctcatttcaattgaagaatttcg 16925844  T
Q  336 acgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacga 435  Q
    | |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| | ||   ||||||||||||||||| |||||||| |||||    
T  16925843 atgaagctttaagcctaaggcgcataatcagagtttcgacgaagtaaggctgaaagagcaatttcgtatcgaagacaagcaaaag-gcgggaaagcacga 16925745  T
Q  436 tatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatct 535  Q
    | |||||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||  || | ||||    
T  16925744 tttcaagcaatgaggcggtttccttttagtggaaaacgtgggacaagtagttgtccaagatggaggaagtgctgatcatgggcttagtggttcgccatct 16925645  T
Q  536 agttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgag 635  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||    
T  16925644 agtt-tttagtataaatagtagtttccaagccggaaagagggtcgcaaatcatatacagatttctacaacactcaaactaccagcgtctagggaaacgag 16925546  T
Q  636 ttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattactttt 735  Q
    | ||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||  ||||||||| |||||||||||||||||| ||||||||    
T  16925545 taatatagaatgtatgtaaactgatttgtagaccgccccttttattttaatgcattgcatttcaccttttccttgagtttacgtgcgtaaacttactttt 16925446  T
Q  736 atcttgctttattttaagctttttacttgcaaactcaaacttgtc 780  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  16925445 atcttgctttattttaagctttttacttgcaaactcaaacctgtc 16925401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 232 - 678
Target Start/End: Original strand, 8875452 - 8875897
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||     
T  8875452 gttagcctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctttaattttgcaggaatcgaagaactttcttatttcaattggagaaa 8875551  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 431  Q
    ||||||| |   | || |||   |||||||    ||  |||||| ||| |||| |||||||||| |    |||||||| ||| |||||| |||||||| |    
T  8875552 ctcgacggaatatcaagcctggagcgcatagccagatcttcgacaaagcaaggttgaaagagcaattatgcgtcgaagtcaatcaaaag-gcgggaaagc 8875650  T
Q  432 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctct 531  Q
    ||||| ||||||| |||  | |||||| | |||| || |  |||||||| | ||||||||||||||||||||||| |||||||||  || |||  ||       
T  8875651 acgatttcaagcattgaaacggtttccatgtagtggagac-gtgggacagacagttgtccaagatggaggaagtgctgatcatggagttggtggttcgtc 8875749  T
Q  532 atctag-ttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaa 630  Q
    |||||| || |||||||||||||||||||| ||||||| ||||| | |||||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  8875750 atctaggttttttagtataaatagtagttttcaagccggaaagtagatcgcaaatcatatacagaattttacaacactcaaagtaccggcgtctagggaa 8875849  T
Q  631 atgagttatacagaatgtatgtaaactgatttgtagaccatccctttt 678  Q
    |||||||||| ||||||||||||||||||||| ||||||  |||||||    
T  8875850 atgagttataaagaatgtatgtaaactgatttttagacctaccctttt 8875897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 491 - 704
Target Start/End: Complemental strand, 13410056 - 13409844
Alignment:
Q  491 caagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaagtgggtcgcaaatcata 589  Q
    ||||||||||||||||||||||||||| ||||||  || |    ||||||||| ||||||||||    |||||||| || ||| |||||||||||||||     
T  13410056 caagatggaggaagtgttgatcatgggattagtggttcgcccgttagttattttagtataaataagtctttccaagtcggaaaatgggtcgcaaatcatt 13409957  T
Q  590 taaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattca 689  Q
    || ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||  ||||||| ||    
T  13409956 tatagaattctacaacactcaaactaccagcgtctagggaaacgagttatacaaaatgtatgtaaactgatttgtagacca--cctttatttttaatgca 13409859  T
Q  690 ttgcattctaccttt 704  Q
     |||||| |||||||    
T  13409858 atgcattttaccttt 13409844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 7871151 - 7871019
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||| ||||||||||| || |||  || |||||    
T  7871151 agataaatcttgaaagaatattgggaaaatatattggatatgaatctccatctatcattaattatgttgagccaacttatttatagtccaataggctgat 7871052  T
Q  185 tatcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||||||| ||||| | ||||||||    
T  7871051 tatcaattgatggattagttttcccaatattag 7871019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 44123879 - 44123764
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| || |||  || |||||    
T  44123879 agataaatattgaaagaatattggaaaaatatatttgatatgaatctccatctatcattaattgtgctgattcaacttatttacagtccagtaggctgat 44123780  T
Q  185 tatcaattgatggatt 200  Q
    ||||||||||||||||    
T  44123779 tatcaattgatggatt 44123764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 545 - 670
Target Start/End: Complemental strand, 22928664 - 22928538
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| || || ||| |||||| |||||||| || |||| ||||||||||||||| ||||||||||||||||||| ||||||||||     
T  22928664 gtataaataagagtttcctagtcggaaaatgggtcacaaatcatttatagaaattctacaacactcaagctaccggcgtctagggaaacgagttatacat 22928565  T
Q  644 aatgtatgtaaactgatttgtagacca 670  Q
    |||||||||||||||||||||||||||    
T  22928564 aatgtatgtaaactgatttgtagacca 22928538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 595 - 666
Target Start/End: Original strand, 16224082 - 16224153
Alignment:
Q  595 aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtag 666  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16224082 aattctacaacactcaaactaccggcgtctagggaaacgagttatacagaatgtatgtaaactgatttgtag 16224153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 546 - 671
Target Start/End: Original strand, 16226633 - 16226759
Alignment:
Q  546 tataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacaga 644  Q
    ||||||||  ||||||| || || ||| |||||| |||||||| || |||| ||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  16226633 tataaataagagtttcctagtcggaaaatgggtcacaaatcatttatagaaattctacaacactcaaactaccagcgcatagggaaacgagttatacaga 16226732  T
Q  645 atgtatgtaaactgatttgtagaccat 671  Q
    |||||| ||||||||||||||||||||    
T  16226733 atgtatataaactgatttgtagaccat 16226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 2170677 - 2170546
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  2170677 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 2170578  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  2170577 atcaattgatggtttggttttcccaatattag 2170546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 9726689 - 9726558
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  9726689 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 9726590  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  9726589 atcaattgatggtttggttttcccaatattag 9726558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 23342509 - 23342640
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  23342509 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 23342608  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  23342609 atcaattgatggtttggttttcccaatattag 23342640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 595 - 670
Target Start/End: Complemental strand, 13908833 - 13908758
Alignment:
Q  595 aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||||||||||| ||||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||||||    
T  13908833 aattctacaacattcaaactaccggcgtctagggaaaccacttatacagagtgtatgtaaactgatttgtagacca 13908758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 13982639 - 13982508
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| | |||||||||||| |||||||||||||||| ||||| ||| |||||||||||||  |||| |||||| |||| |||| |  || ||||||    
T  13982639 gataaatcttaaaagaatattggaaaaatatatttgatataaatcttcatctatcattaattgtattgagccaacttgtttacagcctagtaggctgatt 13982540  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  13982539 atcaattgatggtttggttttcccaatattag 13982508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 13988965 - 13989095
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| | || |  || ||||||    
T  13988965 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacatcctagtaggctgatt 13989064  T
Q  186 atcaattgatggattcgtttttcaaatatta 216  Q
    |||||||||||| || ||||| | |||||||    
T  13989065 atcaattgatggtttggttttcccaatatta 13989095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 14305158 - 14305242
Alignment:
Q  236 gcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag-agctttcttattt 319  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||||||||| |||||| ||||||||||| ||||| |||||||    
T  14305158 gcctgtaaatttgacaggctcatttaatatggtcgatatttgtttgacctttaactttgtaggaatcgaagaagcttccttattt 14305242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 13924575 - 13924695
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    ||||||||  |||||||||||| ||||| ||||||||||||||| | |||  |||||||| |||  ||||  |||||||||| | || |  || ||||||    
T  13924575 gataaatctcgaaagaatattgagaaaaaatatttgatatgaatattcatccatcattaactgtactgagctaacttatttacaacctagtaggctgatt 13924674  T
Q  186 atcaattgatggattcgtttt 206  Q
    ||||||||||||||| |||||    
T  13924675 atcaattgatggattagtttt 13924695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 20452809 - 20452925
Alignment:
Q  101 aatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggatt 200  Q
    ||||||| ||||||||||||||||||||| ||||| ||| |  ||||||  ||||||||||| |||| | ||||  || ||||||||||||||||  |||    
T  20452809 aatattgagaaaatatatttgatatgaatatccatctattacaaattgtattgagtcaacttgtttacaacccagcaggctgattatcaattgattaatt 20452908  T
Q  201 cgtttttcaaatattag 217  Q
     ||||| || |||||||    
T  20452909 ggttttccagatattag 20452925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 13410310 - 13410236
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||||||||| ||| ||||  ||||||||||||||| ||| ||||  ||||||| ||||||||||||||||||    
T  13410310 gttagcctgtaattttgacaggctcatttaatatggtcaacacttgtccgacctttaactttgcaggaatcgaag 13410236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 13911089 - 13911008
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 337  Q
    ||||||||||| ||| ||||||| ||||||||| ||||||||||||| |||| ||||||| ||||||||| ||| || |||||    
T  13911089 tcatttaatatagtcaacatttggttgacctttaactttgcaggaattgaag-gctttctcatttcaatttgaggatttcgac 13911008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 28703398 - 28703442
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 60  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  28703398 cagagagaatcgaacctgagaccttgaagaggagcacactcccag 28703442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 39253779 - 39253735
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 60  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  39253779 cagagagaatcgaacctgagaccttgaagaggagcacactcccag 39253735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 21881523 - 21881610
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    ||||| ||| |||||||||||||||||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  21881523 agatagatcttgaaagaatattgggaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 21881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 10445128 - 10445190
Alignment:
Q  11 agcagcagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaat 73  Q
    |||| |||||||||||||||||||||||| || || ||||| ||||||||| || ||||||||    
T  10445128 agcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 32651433 - 32651495
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||| |||||| ||||| || ||||| ||||||||| || ||||||||||||||    
T  32651433 agagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccact 32651495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 8796082 - 8796135
Alignment:
Q  11 agcagcagagagaatcgaacctgagaccttgaagatgagcatactcccaggccc 64  Q
    |||| ||||||||||||||| ||||||||||| || ||||||||||||| ||||    
T  8796082 agcatcagagagaatcgaacttgagaccttgaggaggagcatactcccaagccc 8796135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 30311385 - 30311325
Alignment:
Q  19 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||||| || ||||| ||||||||  || ||||| ||||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccact 30311325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 4222223 - 4222160
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||| |||| |||| || ||||| ||||||||  || ||||||||||||||    
T  4222223 cagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccact 4222160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 524
Target Start/End: Complemental strand, 13908923 - 13908884
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtg 524  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  13908923 gttgtccaagatggagaaagtgttgatcatgggattagtg 13908884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 664
Target Start/End: Complemental strand, 15759725 - 15759635
Alignment:
Q  574 tgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||||||||| || |||| ||||| ||||||  || ||||||||||||| |||| |||| ||| ||| ||||||||| |||||||||    
T  15759725 tgggtcgcaaatcatttatagaaattcta-aacactagaagtaccggcgtctagagaaaagagtcatatagattgtatgtaatctgatttgt 15759635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 16354886 - 16354949
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||| ||| || ||||| |||| ||||  | ||||||||||||||    
T  16354886 cagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccact 16354949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 27093355 - 27093418
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||| ||||||||||||||| || ||||| ||||||| |  | ||||||||||||||    
T  27093355 cagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccact 27093418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 46518710 - 46518647
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||| ||||||| ||||||| || ||||| ||||||||  || ||||||||||||||    
T  46518710 cagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 46518647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 53413027 - 53412964
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||| |||||||||||||||| || ||||| |||||||||    ||||||||||||||    
T  53413027 cagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccact 53412964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 523
Target Start/End: Original strand, 16226566 - 16226604
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagt 523  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  16226566 gttgtccaagatggaggaagtgctgatcatgggattagt 16226604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 37788460 - 37788522
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||||||| || ||||| ||||| |||  | ||| ||||||||||    
T  37788460 agagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccact 37788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 47236969 - 47237027
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||| |||||||||||||| ||||| |||||| || || || ||||||||||    
T  47236969 gagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccac 47237027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 2667943 - 2667882
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||| ||||||||||||||||| || || ||||| ||||||||  || |||||||||||||    
T  2667943 agagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccac 2667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 14186727 - 14186667
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||| || ||| ||||||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaataccact 14186667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 15754542 - 15754469
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    ||||||||| |||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  15754542 agaatattgcgaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 15754469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 30510194 - 30510255
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||| ||  | ||||||||||| ||| || |||||| ||||||    
T  30510194 agagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccac 30510255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 240; Significance: 1e-132; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 232 - 758
Target Start/End: Original strand, 33128591 - 33129126
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    ||||||||| |||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | |   ||||| ||||     
T  33128591 gttagcctgcaaatttgacaggctcatttaatatggtcgacatttgtttgacctttaactttgcaggaatcgaagaactttcgtgtacaaattgaagaag 33128690  T
Q  332 c-tcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaa 430  Q
    | ||||||||||  ||| ||| | |||||||| |||||||||||| |||||||| |||| ||||| | || ||||||||||||||||||| ||||| ||     
T  33128691 cttcgacgaagcactaagcctgaagcgcataactggagtttcgacaaagtaaggttgaacgagcaatttcgcgtcgaagacaagcaaaagggcggg-aag 33128789  T
Q  431 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctc 530  Q
    |||||| |||||||| ||  | ||||| |||||||  |||| ||||||||| |  | ||||||||||||||||||| |||||||| ||||||||  || |    
T  33128790 cacgatttcaagcaaagaaacggtttcattttagtgtaaaacgtgggacaagtgatagtccaagatggaggaagtgctgatcatgtgcttagtggttcac 33128889  T
Q  531 tatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaa 630  Q
     |||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  33128890 catctaggtttttagtataaatagtagtttccaagccggaaagtgagtcgcaaatcatatacataattctacaacactcaaactaccggtgtctagggaa 33128989  T
Q  631 atgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctacc--ttttccatgagtttacgtgcgtaaaat 728  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||  |||||| |||||||||||| ||||| |    
T  33128990 acgagttatacagaatgtatgtaaactgatttgtagaccaccccttttattttaatgcattgcattttaccttttttccttgagtttacgtgggtaaact 33129089  T
Q  729 ta-------cttttatcttgctttattttaagctttt 758  Q
    ||        |||||||||||||||||||||||||||    
T  33129090 taattttatattttatcttgctttattttaagctttt 33129126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 232 - 745
Target Start/End: Original strand, 21290631 - 21291141
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    ||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  21290631 gttagtctgtaaatttaacaggctcatttaatatggttgacatttgtttgaccttttactttgcagaaatcgaagggctttctcatttcaattggagaat 21290730  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 431  Q
    ||||||||| | |||| |||||||  |||| |  || ||||||||||| ||||||||||||| | |||  |||| ||| |||||||||| |||||||| |    
T  21290731 ctcgacgaaacgttaagcctaaggtccatattcagaatttcgacgaagcaaggctgaaagagtaatcttgcgtcaaagtcaagcaaaag-gcgggaaagc 21290829  T
Q  432 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctct 531  Q
    ||||| ||||||| |||  | |||||| | |||| ||||  |||| |||   ||||||||| |||||||||||||||||||||||  ||||||  || |     
T  21290830 acgatttcaagcattgaaacggtttccatgtagtggaaac-gtggcacaggcagttgtccatgatggaggaagtgttgatcatggagttagtggttcacc 21290928  T
Q  532 atctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaa 631  Q
    |||||| | |||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  21290929 atctaggt-tttagtataaataagagtttccaagccgaaaagtgggtcacaaatcatatatagaattctacaacactcaaactactggcgtatagggaaa 21291027  T
Q  632 tgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattac 731  Q
     |||||||||| ||||||| |||||| |||||||||||| ||||||||||||||| || |||||| ||| |||||  |||||||||||||||||| ||||    
T  21291028 cgagttatacacaatgtatctaaactaatttgtagaccaccccttttattttaatgcaatgcattttacattttctttgagtttacgtgcgtaaacttac 21291127  T
Q  732 ttttatcttgcttt 745  Q
    ||||||||| ||||    
T  21291128 ttttatctttcttt 21291141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 232 - 784
Target Start/End: Complemental strand, 4601394 - 4600836
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||||||||||| ||||  ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||  || | ||||| ||||     
T  4601394 gttagcctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctctaactttgcaggaatcgaagagctttcgcatataaattgaagaac 4601295  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 431  Q
     ||||| |||| | || ||||| ||| ||  | ||| | ||||| ||| ||||||||||| ||  | || | |||||||||| ||| || ||||||||||    
T  4601294 ttcgacaaagcatcaagcctaaagcgtatggtcggaatctcgacaaagcaaggctgaaagggcgtt-tcgcatcgaagacaaccaagag-gcgggaaaac 4601197  T
Q  432 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctct 531  Q
    ||||| |  |||||| ||| |||||||||||||| ||||| ||||||||| ||||  | |||||||||||||||| |||||||||||||||||  || |     
T  4601196 acgattttgagcaataagggagtttccttttagtggaaaacgtgggacaagtagtgtttcaagatggaggaagtgctgatcatgggcttagtggttcgcc 4601097  T
Q  532 atctag-ttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaa 630  Q
    |||||| || |||||||||| |||||||||||||| ||||||| ||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  4601096 atctaggttttttagtataagtagtagtttccaagtcgaaaagagggtcgcaaattatatacagaattttacaacactcaaactaccggcgtctagggaa 4600997  T
Q  631 atgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctacc-ttttccatgagtttacgtgcgtaaaatt 729  Q
    |  ||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||| |||| |||||| | |||||||||||||||| ||    
T  4600996 acaagttatacaaaatgtatataaactgatttgtagaccagccc-tttattttaatgcattgcattttacctttttcctttagtttacgtgcgtaaactt 4600898  T
Q  730 acttttat--------cttgctttattttaagctttttacttgcaaactcaaacttgtcgaga 784  Q
    ||||||||        |||||||||||||||||  |||||||| |||||||||| ||||||||    
T  4600897 acttttatcttttttacttgctttattttaagc-atttacttgaaaactcaaacctgtcgaga 4600836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 402 - 760
Target Start/End: Complemental strand, 18780883 - 18780519
Alignment:
Q  402 cgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggagg 501  Q
    ||||||||||||||||||| |||||||  |||||| |||||||| || || ||||||||||||| ||||| || ||| || |  | ||| ||||||||||    
T  18780883 cgtcgaagacaagcaaaagggcgggaag-cacgatttcaagcaaagaagcggtttccttttagtggaaaacgtaggataagtgatggtctaagatggagg 18780785  T
Q  502 aagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattcta 601  Q
    ||||| | |||||||||||||||   | | |||||| | |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  18780784 aagtgctaatcatgggcttagtggtcccccatctaggt-tttagtataaatagtagtttccaagccggaaagagggtcgcaaatcatatacagaattcta 18780686  T
Q  602 caacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctac- 700  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||| |||     
T  18780685 caacactcaaactaccggcgtccagggaaacgagttatacagaatgtatgtaaagtgatttgtagaccaccccttttattttaatgcattgcattttact 18780586  T
Q  701 cttttccatgagtttacgtgcgtaaaattac-------ttttatcttgctttattttaagcttttta 760  Q
     |||||| ||||||||| |||||||| ||||       |||||||||||||||||||||||||||||    
T  18780585 tttttccttgagtttacatgcgtaaacttacttttatattttatcttgctttattttaagcttttta 18780519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 484 - 707
Target Start/End: Original strand, 10158696 - 10158915
Alignment:
Q  484 agttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    ||||||||||||||||||||||| |||||||||  ||||||  || | |  ||| | |||||||||||||   |||||||||||| ||| ||||||||||    
T  10158696 agttgtccaagatggaggaagtgctgatcatggagttagtggttcgccagttaggtttttagtataaataagtgtttccaagccggaaaatgggtcgcaa 10158795  T
Q  584 atcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttatttt 683  Q
    |||||||| | |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||   | ||||||||    
T  10158796 atcatatacaaaattctacaacactcaaactaccgtcctctagggaaacgagttatacagaatgtatgtaaactgatttgtagacca---cctttatttt 10158892  T
Q  684 aattcattgcattctaccttttcc 707  Q
    |||  |||||||| ||||||||||    
T  10158893 aatgtattgcatt-taccttttcc 10158915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 486 - 670
Target Start/End: Original strand, 18522843 - 18523028
Alignment:
Q  486 ttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaagtgggtcgcaaa 584  Q
    |||||||||||||||||||||||||||||||| ||||||  || | |  ||||||||| ||||||||||   ||||||||| || ||| ||||||||| |    
T  18522843 ttgtccaagatggaggaagtgttgatcatgggattagtggttcgccagttagttattttagtataaataagtgtttccaagtcggaaaatgggtcgcaga 18522942  T
Q  585 tcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||| || | ||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  18522943 tcatttataaaattctacaacactcaaactaccggtgtctagggaaatgatttatacataatgtatataaactgatttgtagacca 18523028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 545 - 670
Target Start/End: Original strand, 22533662 - 22533788
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||| |||| ||||| || ||| ||||||||||||||| || |||| |||||||||| |||||||||||| ||||||||||| |||||||||||    
T  22533662 gtataaataggagttgccaagtcggaaaatgggtcgcaaatcatttatagaaattctacaacattcaaactaccggagtctagggaaacgagttatacag 22533761  T
Q  644 aatgtatgtaaactgatttgtagacca 670  Q
    |||||||||||||||||||||||||||    
T  22533762 aatgtatgtaaactgatttgtagacca 22533788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 492 - 656
Target Start/End: Complemental strand, 25401951 - 25401786
Alignment:
Q  492 aagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatat 590  Q
    ||||||||||||||| |||||||| | |||||   || | |  ||||||||| ||||||||||   |||||||||||| ||| |||||| |||||||| |    
T  25401951 aagatggaggaagtgctgatcatgagattagtcgttcgccagttagttattttagtataaataagtgtttccaagccggaaaatgggtcacaaatcattt 25401852  T
Q  591 aaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaac 656  Q
    | |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  25401851 atagaattctacaacactcaaactaccggcgtctagggaaacaagttattcagaatgtatgtaaac 25401786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 40276251 - 40276129
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||| | || || |||||||| ||||||  || |||||    
T  40276251 agataaatcttgaaagaatattgggacaatatatttgaaatgaatctccatctatcattaattgtgctaagccatcttatttacagcccagtaggctgat 40276152  T
Q  185 tatcaattgatggattcgttttt 207  Q
    |||||||||||||||| ||||||    
T  40276151 tatcaattgatggattagttttt 40276129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 543 - 704
Target Start/End: Complemental strand, 20886734 - 20886575
Alignment:
Q  543 tagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttataca 642  Q
    |||||||||||   ||||||||   ||||| ||||||  ||||||| || |||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  20886734 tagtataaataagtgtttccaacttgaaaaatgggtcagaaatcatttatagaattctacaacacttaaactaccgacgtctagggaaacgagttataca 20886635  T
Q  643 gaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttt 704  Q
      ||||||||||||||||||||||||||  |||||  ||||||| || |||||| |||||||    
T  20886634 atatgtatgtaaactgatttgtagacca--cctttatttttaatgcaatgcattttaccttt 20886575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 29543454 - 29543598
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| | || ||| ||||||| | || |  || |||||    
T  29543454 agataaatattgaaagaatattgggaaaatatattttatatgaatctccatctatcattaattgtgctaagccaatttatttacatcctagtaggctgat 29543553  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    |||||||||||||||| ||||| | |||||| |  ||||||||||    
T  29543554 tatcaattgatggattagttttcccaatatttgggggagataata 29543598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 26708014 - 26707874
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||||||  |||| |||||| ||||  ||| |  || || |||    
T  26708014 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatcattaattgtattgagccaacttgtttactgcctagtaggctaatt 26707915  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagata 226  Q
    |||||||||||| || ||||||| ||||||||  |||||||    
T  26707914 atcaattgatggtttggtttttccaatattagggggagata 26707874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 27421623 - 27421516
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| || |||  ||| ||||    
T  27421623 agataaattttgaaagaatattggaaaaatatatttgatatgaatctccatctatcattaattgtgttgagttaacttatttatag-ccagtagagtgat 27421525  T
Q  185 tatcaattg 193  Q
    |||||||||    
T  27421524 tatcaattg 27421516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 15714755 - 15714886
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  15714755 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 15714854  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  15714855 atcaattgatggtttggttttcccaatattag 15714886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 26026833 - 26026938
Alignment:
Q  95 tgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattga 194  Q
    |||||||||||| | |||||||||||||||||||||||||| |||||||||||||  |||| ||||||||||| || |||  ||  ||||||||||||||    
T  26026833 tgaaagaatattagaaaaatatatttgatatgaatctccatctatcattaattgtattgagccaacttatttatagtccagtaggttgattatcaattga 26026932  T
Q  195 tggatt 200  Q
    ||||||    
T  26026933 tggatt 26026938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 20887019 - 20886946
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggag 328  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||    
T  20887019 tcatttaatatggtcaacatttgtttgacttttaactttgcaggaatctaagagctttctcatttcaattggag 20886946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 33494935 - 33494824
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| || ||| |||| |||| |  ||  |||||    
T  33494935 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatcattaattgtattgagccagcttgtttatagcctagtaggatgatt 33494836  T
Q  186 atcaattgatgg 197  Q
    ||||||||||||    
T  33494835 atcaattgatgg 33494824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 22578199 - 22578055
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||  |||||||||| || ||| |||||||||||| |||||||| | |||||||||||||  |||| |||||| |||| | ||||  ||  ||||    
T  22578199 agataaattttgaaagaataatgagaagatatatttgatacgaatctccctctatcattaattgtactgagccaacttgtttacaacccagtaggatgat 22578100  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    |||||||| ||||||| ||||| | ||||||||  ||||||||||    
T  22578099 tatcaattaatggattagttttcccaatattagggggagataata 22578055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 25402204 - 25402098
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    ||||||||||||||| |||||  ||||||||||||| | ||||||||||||||||| ||||| | |||||||||| ||||||| ||||||| | ||| ||    
T  25402204 gttagcctgtaaattcaacaggctcatttaatatgggcaacatttgtttgacctttaactttaccggaatcgaag-gctttctcatttcaaattgagtat 25402106  T
Q  332 ctcgacga 339  Q
     |||||||    
T  25402105 ttcgacga 25402098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 3618766 - 3618707
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcatta 144  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  3618766 agataaatcctgaaagaatattgagaaaatatatttgatatgaatcttcatctatcatta 3618707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 10526905 - 10526842
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||| |||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  10526905 cagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 22531243 - 22531311
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    ||||||||||||||| ||||||| |||||||||  ||||||||||| ||||| ||||||| |||||||||    
T  22531243 tcatttaatatggtcaacatttggttgacctttatctttgcaggaaccgaag-gctttctcatttcaatt 22531311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 27315599 - 27315639
Alignment:
Q  92 tcgtgaaagaatattgggaaaatatatttgatatgaatctc 132  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  27315599 tcgtaaaagaatattgggaaaatatatttgatatgaatctc 27315639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 6650677 - 6650614
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||| |||| || |||||||||||| |  || ||||||||||||||    
T  6650677 cagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccact 6650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 8177176 - 8177239
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||| ||||||| || ||||| ||||||||  || ||||||||||||||    
T  8177176 cagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 8177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 9165189 - 9165252
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||| ||||||||||| |||| || ||||| ||||||||| || ||||||||||||||    
T  9165189 cagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccact 9165252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 33700767 - 33700830
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||   | ||||||||||||||    
T  33700767 cagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccact 33700830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 36371552 - 36371489
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||| ||||||||| || ||||| |||||||||  | ||||||||||||||    
T  36371552 cagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccact 36371489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 676 - 745
Target Start/End: Complemental strand, 20147044 - 20146975
Alignment:
Q  676 tttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattacttttatcttgcttt 745  Q
    ||||||||||| || |||||| |||||||||  | |||||||||||||||| || |||||||||| ||||    
T  20147044 tttattttaatgcaatgcattttaccttttctttaagtttacgtgcgtaaactttcttttatctttcttt 20146975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 27223128 - 27223185
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacca 77  Q
    |||||||||||||||||||||||||| ||||| ||||||||  || ||| ||||||||    
T  27223128 gagaatcgaacctgagaccttgaagaagagcacactcccagatcctaagtcaatacca 27223185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 2799944 - 2799900
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 60  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||    
T  2799944 cagagagaatcgaacctgagaccttgaggaggagcacactcccag 2799900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 15786317 - 15786373
Alignment:
Q  19 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatac 75  Q
    |||||||||||||||||||||||| || ||||| ||||||||  || ||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 40810549 - 40810505
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 60  Q
    |||||||||||||||||||||||||||||| || || ||||||||    
T  40810549 cagagagaatcgaacctgagaccttgaagaggaacacactcccag 40810505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 3266006 - 3265963
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactccca 59  Q
    ||||||||||||||||||||||||||| || ||||| |||||||    
T  3266006 cagagagaatcgaacctgagaccttgaggaggagcacactccca 3265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 4566630 - 4566567
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||||  | ||||||||| ||||    
T  4566630 cagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcact 4566567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 18537030 - 18536943
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    ||||| ||| |||||||||||||| ||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  18537030 agatagatcttgaaagaatattggaaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 18536943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 6122875 - 6122813
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||| ||||||||||||||||||||| || ||||| ||||||| | || ||||| ||||||||    
T  6122875 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 6122813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 1247195 - 1247150
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccagg 61  Q
    ||||||||||||||||||||||||||| || ||| | |||||||||    
T  1247195 cagagagaatcgaacctgagaccttgaggaggagtacactcccagg 1247150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 4825049 - 4824992
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacca 77  Q
    ||||||| |||||||||||||||||| ||||| ||||| ||| || ||||||| ||||    
T  4825049 gagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacacca 4824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 37360995 - 37360922
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    ||||||||| |||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  37360995 agaatattgagaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 37360922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 252 - 760
Target Start/End: Original strand, 24477449 - 24477957
Alignment:
Q  252 gaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatct-cgacgaagctttaaacc 350  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||  |||   | ||  |||| || |||| |||| | || ||    
T  24477449 gaatcatttaatatggtcaatatttgtttgacctttaactttgcaggaatcgaagagcttttgtatacaacttaaagaagcttcgacaaagcatcaagcc 24477548  T
Q  351 taaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgagg 450  Q
    |||||||||||||||| ||| |||| | ||||||||||||||| | | || ||||||||||||| ||||| |||||||  |||||| |||||||| || |    
T  24477549 taaggcgcataattggcgtt-cgacaatgtaaggctgaaagagaagtttcgcgtcgaagacaagaaaaagggcgggaag-cacgatttcaagcaaagaag 24477646  T
Q  451 cagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataa 550  Q
    | |||||| |||||| ||||| ||||||||| |  ||||||||||||||||||||| |||||||||||||||||  || | |||||| | ||| ||||||    
T  24477647 cggtttccatttagtggaaaacgtgggacaagtgattgtccaagatggaggaagtgatgatcatgggcttagtggttcaccatctaggttttttgtataa 24477746  T
Q  551 atagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtat 650  Q
    |||||||||||||||||| |||||||||| || |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  24477747 atagtagtttccaagccggaaagtgggtcacagatcatatacagaattctacaacactcaaactaccagcgtctagggaaacgagttatacaaaatgtat 24477846  T
Q  651 gtaaactgatttgtagaccatcccttttattttaattcattgca-ttctaccttttccatgagtttacgtgcgtaaaattacttttatcttgctttattt 749  Q
    |||||||||||||||| ||| || |||||||||||| || |||| || || ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  24477847 gtaaactgatttgtaggccacccgttttattttaatgcaatgcatttttatcttttccttgagtttacgtgcgtaaacttacttttatcttgctttattt 24477946  T
Q  750 taagcttttta 760  Q
    |||||||||||    
T  24477947 taagcttttta 24477957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 232 - 740
Target Start/End: Complemental strand, 22264478 - 22263968
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||||||||||| |||   ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| |||   | ||  ||||     
T  22264478 gttagcctgtaaatttcacatgctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcgaagagatttcatatacaagttaaagaag 22264379  T
Q  332 ct-cgacgaagctttaaacctaaggcgc--ataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaa 428  Q
    || |||| |||| | || ||||||||||  |||||||| ||| |||| | || ||| |||||| | | | || ||||||||||||||||||| |||||||    
T  22264378 cttcgacaaagcatcaagcctaaggcgcgcataattggcgtt-cgacaatgtgaggttgaaagggaagtttcgcgtcgaagacaagcaaaagggcgggaa 22264280  T
Q  429 aacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactc 528  Q
      |||||| |||||||| || || ||||||||||||| ||||| ||||||||| |  | ||  ||||||||||||||| |||||||||||||||||  ||    
T  22264279 g-cacgatttcaagcaaagaagcggtttccttttagtggaaaacgtgggacaagtgatggtataagatggaggaagtgctgatcatgggcttagtggttc 22264181  T
Q  529 tctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctaggg 628  Q
       ||||||   |||||||||||||| | ||||||||||| |||| || ||||||| |||||| || |||||||||| |||||||||||| |||||||||    
T  22264180 aacatctaggattttagtataaatagcactttccaagccggaaagaggatcgcaaaacatatacagtattctacaactctcaaactaccgacgtctaggg 22264081  T
Q  629 aaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctacc-ttttccatgagtttacgtgcgtaaaa 727  Q
    ||| ||| |||| ||||||||||||||||||||||||||||| || |||||||||||| ||||| ||| |||| |||||| | ||||||||||| ||||     
T  22264080 aaacgagctatatagaatgtatgtaaactgatttgtagaccaccctttttattttaatgcattgtattttacctttttccttaagtttacgtgcataaac 22263981  T
Q  728 ttacttttatctt 740  Q
    |||||||||||||    
T  22263980 ttacttttatctt 22263968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 609 - 784
Target Start/End: Complemental strand, 22815242 - 22815067
Alignment:
Q  609 caaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttcca 708  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| ||||| ||| ||||||||||     
T  22815242 caaactaccgacgtctagggaaacgagttatacagaatttatgtaaactgatttgttgaccaccccttttattttaatgcattgaattttaccttttcct 22815143  T
Q  709 tgagtttacgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaactcaaacttgtcgaga 784  Q
    |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22815142 tgagtttaagtgcataaacttacttttatcttgctttattttaagctttttacttgcaaactcaaacctgtcgaga 22815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 581 - 775
Target Start/End: Original strand, 22739060 - 22739254
Alignment:
Q  581 caaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagtta-tacagaatgtatgtaaactgatttgtagaccatccctttta 679  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  22739060 caaatcatatacaaaattctacaacactcaaaccaccggcgtctagggaagcgagttaatacagaatgtatgtaaactgatttgtagaccacccctttta 22739159  T
Q  680 ttttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaactcaaac 775  Q
    |||||||||| |||||| |||||||| | | |||||| | ||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  22739160 ttttaattcaatgcattttacctttttcttaagtttatgggcgtaaacttacttttatcttgctttattttaag-attttacttgcaaactcaaac 22739254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 485 - 670
Target Start/End: Complemental strand, 9007158 - 9006973
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagtta-tttagtataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    |||||||||||||||||||||| |||||||||| ||||||  || | |  |||||| |||||||||||||   |||||||||||  ||| ||||||||||    
T  9007158 gttgtccaagatggaggaagtgctgatcatgggattagtggttcgccagttagttagtttagtataaataactgtttccaagccagaaaatgggtcgcaa 9007059  T
Q  584 atcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  9007058 atcatttatagaattctacaacactcaaactaccggcgtctagggaaacgagttatacag-atgtatgtaaactgatttgtagacca 9006973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 422 - 585
Target Start/End: Original strand, 22738260 - 22738423
Alignment:
Q  422 gcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggctta 521  Q
    |||||||| |||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  22738260 gcgggaaagcacgatttcaagcaatgaggcggtttccttttagtggaaaatgtgggacaagtagttgtccaagatagaggaagtgctgatcatgggctta 22738359  T
Q  522 gtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaat 585  Q
    |||  ||   |||||| | |||||||||||||||||||||||||||| |||||||||| |||||    
T  22738360 gtggttcatcatctaggtttttagtataaatagtagtttccaagccggaaagtgggtcacaaat 22738423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 232 - 420
Target Start/End: Original strand, 22735004 - 22735193
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgacctttt-actttgcaggaatcgaagagctttcttatttcaattggagaa 330  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||| |||  |||||||| | |||||||||||||| ||||||| | |||||||||||||||    
T  22735004 gttagtctgtaaatttgacaggatcatttaatatgatcgacatgtgtccgacctttttaatttgcaggaatcgatgagctttttcatttcaattggagaa 22735103  T
Q  331 tctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaag 420  Q
    ||||||||||||  ||| ||||||||||||| || ||||||||||||||||||||| |||||||| | |  |||||||||||||||||||    
T  22735104 tctcgacgaagcaataaccctaaggcgcatagttagagtttcgacgaagtaaggctaaaagagcatttttgcgtcgaagacaagcaaaag 22735193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 485 - 670
Target Start/End: Complemental strand, 17983588 - 17983403
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaa 584  Q
    |||||||||||||||| ||||| |||||||||| ||||||  |  |    ||||| |||||||||||||  ||||||||||||| |||  ||||||||||    
T  17983588 gttgtccaagatggagaaagtgctgatcatgggattagtgttttgcatgttagttttttagtataaataagagtttccaagccggaaaacgggtcgcaaa 17983489  T
Q  585 tcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||| ||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  17983488 tcatttatgaaattctacaacactcaaactaccggcgtctagggaaacaagttatacataatgtatgtaaactgatttgtagacca 17983403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 486 - 670
Target Start/End: Original strand, 921038 - 921222
Alignment:
Q  486 ttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaat 585  Q
    ||||||||||||||||||||   ||||||||| ||||||  | || |  ||| | |||||||||||||   |||||||||||  ||| |||||| |||||    
T  921038 ttgtccaagatggaggaagttccgatcatggggttagtggttatccagttaggtttttagtataaataagtgtttccaagcctgaaaatgggtctcaaat 921137  T
Q  586 catataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||||| | ||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||||| ||||||||||||||    
T  921138 catatacataattctacaacactcaaactaccggtgtttagggaaacgagttatacataatgtatgtaaattgatttgtagacca 921222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 490 - 670
Target Start/End: Complemental strand, 23818384 - 23818201
Alignment:
Q  490 ccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaagtgggtcgcaaatcat 588  Q
    ||||||||||||||||| |||||||||| ||||||  || | |  ||||||||| ||||||||||   |||||||| | ||||| |||||||||||||||    
T  23818384 ccaagatggaggaagtgctgatcatgggattagtggttcaccagttagttattttagtataaataagtgtttccaaactgaaaaatgggtcgcaaatcat 23818285  T
Q  589 ataaagaattctacaacactcaaacta--ccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
      | | |||||||||||||||||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  23818284 taatataattctacaacactcaaactataccgacgtctagggaaacgagttatacataatgtatgtaaactgatttgtagacca 23818201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 492 - 670
Target Start/End: Original strand, 15927375 - 15927553
Alignment:
Q  492 aagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatata 591  Q
    ||||||||||||||  ||||| |||| ||||||  || | |  ||| | |||||||||||||   |||||||||  | ||| ||||||||||||||| ||    
T  15927375 aagatggaggaagttctgatcgtggggttagtgcttcgccagttaggtttttagtataaataagtgtttccaagatggaaaatgggtcgcaaatcattta 15927474  T
Q  592 aagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
      |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  15927475 ttgaattctacaacactcaaactacccgcgtctagggaaacgagttatacagaatgtatgtaaactgatttttagacca 15927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 8508286 - 8508430
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    |||||| || |||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||  |||||| |||| ||||||  ||  ||||    
T  8508286 agataagtcttgaaagaatattgggaaaatatatttgatatgaacctccatctatcattaattgtactgaaccaacttgtttacagcccagtaggttgat 8508385  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    |||||||||||||||| ||||| | ||||||||  ||||||||||    
T  8508386 tatcaattgatggattagttttcctaatattagggggagataata 8508430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 545 - 671
Target Start/End: Original strand, 24093165 - 24093292
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| || || ||| ||||||||||||||| || |||| |||||||||||||||||||||| ||  |||| ||||||| |||||||    
T  24093165 gtataaataagagtttcctagtcggaaaatgggtcgcaaatcatttatagaaattctacaacactcaaactaccgacgcataggaaaatgagctatacag 24093264  T
Q  644 aatgtatgtaaactgatttgtagaccat 671  Q
    ||||||||||||||||||||||||||||    
T  24093265 aatgtatgtaaactgatttgtagaccat 24093292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 541 - 671
Target Start/End: Original strand, 12149240 - 12149368
Alignment:
Q  541 tttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttat 639  Q
    |||||||| ||||  ||||| |||| |||||| ||||||||||||||| || |||| || |||||||||||||||||||   |||||||||| |||||||    
T  12149240 tttagtattaataagagtttacaagtcgaaaaatgggtcgcaaatcatttatagaaattttacaacactcaaactaccg---tctagggaaacgagttat 12149336  T
Q  640 acagaatgtatgtaaactgatttgtagaccat 671  Q
    | ||||||||||||||||||||||||||||||    
T  12149337 aaagaatgtatgtaaactgatttgtagaccat 12149368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 920792 - 920866
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||||| |||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  920792 gttagcctataaattcaacaggctcatttaatatggtcaacatttgtttgaccttttactttgcaggaatcgaag 920866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 9007406 - 9007325
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttct 314  Q
    |||||||| ||||||  ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||    
T  9007406 gttagcctataaattcgacagactcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcgaa-agctttct 9007325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 10737696 - 10737817
Alignment:
Q  97 aaagaatattgggaaaata-tatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgat 195  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||| |||  |||| ||||||||||| | || |  || ||||||||||||||||    
T  10737696 aaagaatattgggaaaaaaatatttgatatgaatctccatctatcattaactgtattgagccaacttatttacaacctagtaggctgattatcaattgat 10737795  T
Q  196 ggattcgtttttcaaatattag 217  Q
    || || ||||| | ||||||||    
T  10737796 gggttagttttcccaatattag 10737817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 662
Target Start/End: Complemental strand, 21302176 - 21302058
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| || || ||| |||||| |||||||| || |||| ||||||||||||||||||| | |||  | |||||| |||||||||||    
T  21302176 gtataaataagagtttcctagtcggaaaatgggtcccaaatcatttatagaaattctacaacactcaaactatcagcgcattgggaaacgagttatacag 21302077  T
Q  644 aatgtatgtaaactgattt 662  Q
    ||||||||||||| |||||    
T  21302076 aatgtatgtaaacggattt 21302058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 23818637 - 23818563
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||| |||||||  |||||  ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  23818637 gttagcatgtaaatccaacaggctcatttaatatggtcaacatttgtttgaccttttactttgtaggaatcgaag 23818563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 3624660 - 3624599
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccact 3624599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 576 - 664
Target Start/End: Original strand, 15340884 - 15340970
Alignment:
Q  576 ggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||||||| || |||||||||   |||||||| |||  |||||||| |||| |||| |||||||||||||||||||||||||||    
T  15340884 ggtcgcaaatcatttatagaattctag--cactcaaagtactagcgtctagagaaaagagtcatacagaatgtatgtaaactgatttgt 15340970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 576 - 664
Target Start/End: Original strand, 15429949 - 15430035
Alignment:
Q  576 ggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||||||| || |||||||||   |||||||| |||  |||||||| |||| |||| |||||||||||||||||||||||||||    
T  15429949 ggtcgcaaatcatttatagaattctag--cactcaaagtactagcgtctagagaaaagagtcatacagaatgtatgtaaactgatttgt 15430035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 576 - 664
Target Start/End: Original strand, 15521253 - 15521339
Alignment:
Q  576 ggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||||||| || |||||||||   |||||||| |||  |||||||| |||| |||| |||||||||||||||||||||||||||    
T  15521253 ggtcgcaaatcatttatagaattctag--cactcaaagtactagcgtctagagaaaagagtcatacagaatgtatgtaaactgatttgt 15521339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 22602538 - 22602489
Alignment:
Q  258 tttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaaga 307  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  22602538 tttaatatggtcaacatttgtttgactttttactttgcaggaatcgaaga 22602489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 17931404 - 17931340
Alignment:
Q  234 tagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcagg 298  Q
    |||||||||| ||| ||||  ||||||||||||||||||||||| ||||||||| ||||||||||    
T  17931404 tagcctgtaattttgacaggctcatttaatatggtcgacatttggttgacctttaactttgcagg 17931340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 15926874 - 15926932
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttct 314  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||    
T  15926874 tcatttaatatggtcaacatttgtttgacctttaactttgcaggaat-gaagaggtttct 15926932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 615 - 670
Target Start/End: Complemental strand, 23242396 - 23242341
Alignment:
Q  615 accggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  23242396 accggtgtctagggaaacgagttatacagaatgtatgtaaactaatttgtatacca 23242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 633 - 670
Target Start/End: Original strand, 21285056 - 21285093
Alignment:
Q  633 gagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21285056 gagttatacagaatgtatgtaaactgatttgtagacca 21285093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 968442 - 968382
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||||||||||||||||||||| || || ||||| ||||||||| || |||||||||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 968382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 328
Target Start/End: Complemental strand, 17983836 - 17983741
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggag 328  Q
    |||||||||||| ||| ||||  |||||||||| |||| ||| ||| ||||||||| |||||| | ||||||||| ||||||| ||||||| |||||    
T  17983836 gttagcctgtaattttgacaggctcatttaataaggtcaacacttggttgacctttaactttgaaagaatcgaag-gctttctcatttcaactggag 17983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 6536602 - 6536539
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||| |||||||||||||||| || ||||| ||||| ||| || ||||||||||||||    
T  6536602 cagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccact 6536539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 16852418 - 16852359
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||| || || ||||| ||||||||| || ||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccact 16852359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 18540380 - 18540317
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||| ||  || | ||||||||| || ||||||||||||||    
T  18540380 cagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccact 18540317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 19703485 - 19703544
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||| || ||||| |||| |||| || ||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccact 19703544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 21284759 - 21284825
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaa 322  Q
    ||||||||||||||| ||||||||||||||  |  ||||||||||||||||| ||||||| |||||||    
T  21284759 tcatttaatatggtcaacatttgtttgaccactatctttgcaggaatcgaag-gctttctcatttcaa 21284825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 35690058 - 35690121
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||| || ||||| || |||||  || ||||||||||||||    
T  35690058 cagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccact 35690121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 12148956 - 12149037
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 337  Q
    ||||||||||||||| ||||||| |||||| || |||||| ||||||| ||| ||||||| ||||||||| ||| || |||||    
T  12148956 tcatttaatatggtcaacatttggttgaccgttaactttgtaggaatcaaag-gctttctcatttcaattcgaggatttcgac 12149037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 30716262 - 30716189
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  30716262 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 30716189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 22193360 - 22193420
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||| ||||||||| || ||||| |||||||||||| ||| ||| |||||    
T  22193360 gagagaatcgaacctaagaccttgaggaggagcacactcccaggccccaagtcaacaccac 22193420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 2203570 - 2203511
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||| || ||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  2203570 gagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 2203511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3058046 - 3058105
Alignment:
Q  19 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| | || || ||||||||||    
T  3058046 agagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccac 3058105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 3174799 - 3174834
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagca 51  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3174799 cagagagaatcgaacctgagaccttgaggatgagca 3174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 8794339 - 8794402
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||| ||| || ||||| ||| |||||  | ||||||||||||||    
T  8794339 cagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccact 8794402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 11819857 - 11819795
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||| ||||||||||||||||||||| || ||||| ||||||| | || ||||| ||||||||    
T  11819857 agagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 11819795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 21302250 - 21302200
Alignment:
Q  473 gtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagt 523  Q
    |||||||||| | |||||| |||||||||||||| |||||||||| |||||    
T  21302250 gtgggacaaacaattgtccgagatggaggaagtgctgatcatgggattagt 21302200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 28783138 - 28783080
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||| ||||||||||| || ||||| ||||||||| |  |||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccac 28783080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 31843876 - 31843830
Alignment:
Q  11 agcagcagagagaatcgaacctgagaccttgaagatgagcatactcc 57  Q
    |||| |||||| ||||||||||||||| |||||||| ||||||||||    
T  31843876 agcatcagagaaaatcgaacctgagactttgaagataagcatactcc 31843830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 33017296 - 33017238
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaata 74  Q
    ||||||||||||||||||||||||||| || ||||| ||| |||||  | |||||||||    
T  33017296 cagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 27750811 - 27750750
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||| ||||||||||||||||||||| || ||||| ||||||| | || ||||| |||||||    
T  27750811 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 27750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 30723985 - 30723912
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||| ||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  30723985 agaatattggaaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 30723912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 423 - 784
Target Start/End: Complemental strand, 15125429 - 15125069
Alignment:
Q  423 cgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 522  Q
    ||||||| ||| || |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15125429 cgggaaagcacaatttcaagcaatgaggctgtttccttttagtagaaaacgtgggacaagtagttgtccaagatggaggaagtgttgatcatgggcttag 15125330  T
Q  523 tgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgt 622  Q
    ||  |  | |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  15125329 tggtttgccatctagttttttagtataaatagtagtttccaagctggaaagtgggtcgcaaatcatatacagaattctacaacactcaaactaacggcgt 15125230  T
Q  623 ctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcg 722  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||| || |||||||||||| || |||||| |||||||||| |||||||||| | |    
T  15125229 ctagggaaacaagttattcagaatgtatgtaaactgatttgtagaccacccattttattttaatgcaatgcattttaccttttccttgagtttacgcgag 15125130  T
Q  723 taaaattacttttatcttgctttattttaagctttttacttgcaaactcaaacttgtcgaga 784  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15125129 taaacttacttctatcttgctttattttaagc-ttttacttgcaaactcaaacctgtcgaga 15125069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 255 - 740
Target Start/End: Complemental strand, 17132989 - 17132516
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgacgaagctttaaacctaag 354  Q
    ||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||| || |||||||| ||||   || ||||||    
T  17132989 tcattaaatatggtcgacttttgtttgacctatcactttgcaggaatcgaagagctttctcatttcaattgaaggatctcgacaaagcaccaagcctaag 17132890  T
Q  355 gcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagt 454  Q
    ||||||   |||||||||||  ||  ||||| |         |  | ||||||| ||||||||||| | ||| |  |||||| |||||||| ||  | ||    
T  17132889 gcgcat---tggagtttcgaaaaaacaaggcag---------ttgcgcgtcgaacacaagcaaaagggtggggag-cacgatttcaagcaaggaatcggt 17132803  T
Q  455 ttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatag 554  Q
    ||||||||||| ||||| ||||| ||| | ||||||||||||||| |||||| |||||||||  ||||||  || | ||||||||  |||||||||||||    
T  17132802 ttccttttagtggaaaacgtggggcaagtggttgtccaagatggaagaagtgctgatcatggagttagtggttcgccatctagtttattagtataaatag 17132703  T
Q  555 tagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaa 654  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  17132702 tagtttccaagccaaaaagtgggtcgcaaatcatatacaaaattctacaacactcaaactaccggcgtctagggaaacaagttatacagaatgtatgtaa 17132603  T
Q  655 actgatttgtagaccatcccttttattttaattca-ttgcattctaccttttccatgagtttacgtgcgtaaaattacttttatctt 740  Q
    |||||||||||||||| || | |||||||| | || ||||||| |||||||||| |||||||||||| ||||| |||||||||||||    
T  17132602 actgatttgtagaccacccttcttattttagtgcatttgcattttaccttttccttgagtttacgtgtgtaaacttacttttatctt 17132516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 232 - 760
Target Start/End: Original strand, 7404139 - 7404661
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||| |||| |||||| ||||  ||||||||| ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||  |||||  |||     
T  7404139 gttatcctgcaaattttacaggttcatttaatttggtcgacatttgtttgacctgtaactttgcaggaatcgaagagatttcgtattcaaattgaggaag 7404238  T
Q  332 ct-cgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaa 430  Q
    || |||| | || | || |||| ||||||| |   |||| ||||| ||| ||         |||| | || | ||||||||||||||||| |||| ||      
T  7404239 cttcgacaaggcatcaagcctagggcgcatta---gagtctcgacaaagcaa---------agcagtttcgcatcgaagacaagcaaaagggcggtaag- 7404325  T
Q  431 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctc 530  Q
    |||||| |||||||| || |||||||||||||||| ||||| ||||||||| |  | ||| |||||||| ||||||||||| ||||||||||||  || |    
T  7404326 cacgatttcaagcaaagaagcagtttccttttagtggaaaacgtgggacaagtgatggtctaagatggaagaagtgttgattatgggcttagtggttcac 7404425  T
Q  531 tatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaa 630  Q
     |||||| | |||| ||||||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||||| |||||||||  ||||||| ||    
T  7404426 catctaggtttttattataaatagtagtttactagccgaaaagagggtcgcaaatcatatacagaattctacaacactgaaactaccg--gtctaggaaa 7404523  T
Q  631 atgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctac-cttttccatgagtttacgtgcgtaaaatt 729  Q
    | || |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| |||| |||  |||||| | |||||||||||||||| ||    
T  7404524 acgaattatacagaatgtatgtaaacttatttgtagaccaccccttttattttaatgcattacattttacttttttccttcagtttacgtgcgtaaactt 7404623  T
Q  730 a-------cttttatcttgctttattttaagcttttta 760  Q
    |       ||||||||||||||||||||||||||||||    
T  7404624 aattttatcttttatcttgctttattttaagcttttta 7404661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 258 - 740
Target Start/End: Complemental strand, 17140593 - 17140124
Alignment:
Q  258 tttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgacgaagctttaaacctaaggcg 357  Q
    ||||||||||||||| |||||||||||| | |||| |||||||||||||| |||||| | |||||||| || |||||||| ||||   || |||||||||    
T  17140593 tttaatatggtcgacttttgtttgacctatcactt-gcaggaatcgaagaactttctcagttcaattgaaggatctcgacaaagcaccaagcctaaggcg 17140495  T
Q  358 cataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagtttc 457  Q
    |||   |||||||||||| ||  ||         |||| |  | ||||||||||||||||||| |||||||  || ||| |||||||| || |  |||||    
T  17140494 cat---tggagtttcgacaaaacaa---------agcagttgcgcgtcgaagacaagcaaaagggcgggaag-catgatttcaagcaaggaagaggtttc 17140408  T
Q  458 cttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtag 557  Q
    |||||||| |||||  |||| ||| | ||| || |||||||| |||||  |||||||||  | ||||  || | ||||||||  ||||||||| ||||||    
T  17140407 cttttagtggaaaacatggggcaagtggttatctaagatggaagaagtcctgatcatggagtcagtggttcgccatctagtttattagtataagtagtag 17140308  T
Q  558 tttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaact 657  Q
    ||||||||||  ||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  17140307 tttccaagccagaaagtgggttgcaaatcatatacaaaattctacaacactcaaactaccggcgtctagggaaacgagttataaaaaatgtatgtaaact 17140208  T
Q  658 gatttgtagaccatcccttttattttaattca-ttgcattctaccttttccatgagtttacgtgcgtaaaattacttttatctt 740  Q
    ||||| ||||| | ||||||||||||||| || ||||| | |||||||||| |||||||||||||||||| |||||||||||||    
T  17140207 gatttttagactaccccttttattttaatgcatttgcagtttaccttttccttgagtttacgtgcgtaaacttacttttatctt 17140124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 479 - 725
Target Start/End: Complemental strand, 14961403 - 14961159
Alignment:
Q  479 caaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggt 578  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||  ||   |  ||| | ||||||| |||||   |||||||||||| ||| |||||    
T  14961403 caaacagttgtccaagatggaggaagtgttgatcatggggttagtggttcgtcagttaggtttttagtagaaataagtgtttccaagccggaaaatgggt 14961304  T
Q  579 cgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatccctttt 678  Q
    ||||||| || || ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |||  | |||||     
T  14961303 cgcaaattatttatagaattctaaaacactcaaactaccggcgtctagggaaacgagttatacataatgtatgtaaactaatttgttgac--taccttta 14961206  T
Q  679 attttaattcattgcattctaccttttccatgagtttacgtgcgtaa 725  Q
     ||||||| || |||||| |||||||||  |||||||||||||||||    
T  14961205 tttttaatgcaatgcattttaccttttctttgagtttacgtgcgtaa 14961159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 479 - 725
Target Start/End: Complemental strand, 15390875 - 15390631
Alignment:
Q  479 caaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggt 578  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||  ||   |  ||| | ||||||| |||||   |||||||||||| ||| |||||    
T  15390875 caaacagttgtccaagatggaggaagtgttgatcatggggttagtggttcgtcagttaggtttttagtagaaataagtgtttccaagccggaaaatgggt 15390776  T
Q  579 cgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatccctttt 678  Q
    ||||||| || || ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |||  | |||||     
T  15390775 cgcaaattatttatagaattctaaaacactcaaactaccggcgtctagggaaacgagttatacataatgtatgtaaactaatttgttgac--taccttta 15390678  T
Q  679 attttaattcattgcattctaccttttccatgagtttacgtgcgtaa 725  Q
     ||||||| || |||||| |||||||||  |||||||||||||||||    
T  15390677 tttttaatgcaatgcattttaccttttctttgagtttacgtgcgtaa 15390631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 484 - 667
Target Start/End: Original strand, 9560337 - 9560521
Alignment:
Q  484 agttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaagtgggtcgca 582  Q
    |||||||||||||||  ||||||||||||||||| ||||||  || | |  ||||||||| ||||||||||   |||||||||||| ||| |||||||||    
T  9560337 agttgtccaagatgggagaagtgttgatcatgggattagtggttcgccagttagttattttagtataaataagtgtttccaagccggaaaatgggtcgca 9560436  T
Q  583 aatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtaga 667  Q
    |||||| || |||||||||||||||||||||||| | | |||| ||||| |||||||| ||||||||||||||||||||||||||    
T  9560437 aatcatttatagaattctacaacactcaaactactgacatctaaggaaacgagttatatagaatgtatgtaaactgatttgtaga 9560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 574 - 670
Target Start/End: Complemental strand, 12331100 - 12331004
Alignment:
Q  574 tgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12331100 tgggtcgcaaatcatttatagaattctacaacactcaaactaccggcgtctagggaaacgagttatacagaatgtatgtaaactgatttgtagacca 12331004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 484 - 670
Target Start/End: Original strand, 10309899 - 10310088
Alignment:
Q  484 agttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagtt-atttag-tataaatagtagtttccaagccgaaaagtgggtcgc 581  Q
    ||||||||||||||||||||||||||||| |||| |||||   |  | |  || || |||||| ||||||||  |||||||||| || ||| ||||||||    
T  10309899 agttgtccaagatggaggaagtgttgatcgtgggattagtcttttgccagttattttatttaggtataaataagagtttccaagtcggaaaatgggtcgc 10309998  T
Q  582 aaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  10309999 aaatcatttatagaaattctacaacactcaaactaccggcgtctagggaaacgagttatacagaatgtatgtaaactaatttgcagacca 10310088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 485 - 670
Target Start/End: Original strand, 18098279 - 18098465
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagtta-tttagtataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    |||| |||||||||||||||||||||||||||| ||| ||  || | |  |||||| |||||||||||||   |||||||||||| |||  |||||| ||    
T  18098279 gttgcccaagatggaggaagtgttgatcatgggattaatggttcgccagttagttattttagtataaataagtgtttccaagccggaaaaagggtcgaaa 18098378  T
Q  584 atcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||| || |||||| |  ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||  |||||||||||    
T  18098379 atcatttatagaattttgaaacactcaaactaccggtgcctagggaaacgagttataaagaatgtatgtaaactattttgtagacca 18098465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 17620917 - 17621056
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  |||||||||    
T  17620917 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtagactgatt 17621016  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagat 225  Q
    |||||||||||| || ||||| | ||||||||| ||||||    
T  17621017 atcaattgatggtttggttttcccaatattagagggagat 17621056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 44658865 - 44659005
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| |||| |  || ||||||    
T  44658865 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgtttacagcctagtaggctgatt 44658964  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagata 226  Q
    |||||||||||| || ||||| | ||||||||  |||||||    
T  44658965 atcaattgatggtttggttttcccaatattagggggagata 44659005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 32146611 - 32146742
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  32146611 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 32146710  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||||| ||||||||    
T  32146711 atcaattgatggtttggtttttccaatattag 32146742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 16646556 - 16646687
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  16646556 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 16646655  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  16646656 atcaattgatggtttggttttcccaatattag 16646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 20119274 - 20119417
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    ||||||||  |||||||||| ||||||| ||||||||||||||||||||| |||||||| ||||  |||| ||||||||||| |||  |  || ||||||    
T  20119274 gataaatctggaaagaatatcgggaaaaaatatttgatatgaatctccatctatcattatttgtattgagccaacttatttatagcttagtaggctgatt 20119373  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||| ||||| | |||||||   ||||||||||    
T  20119374 atcaattgatggattagttttcccaatattaaggggagataata 20119417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 34324480 - 34324620
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| |||||||||||||     ||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||| |||| |  || |||||    
T  34324480 agataaatcttgaaagaatattgc----atatatttgatataaatctccatctatcattaattgtgttgagccaacttatttacagcctagtaggctgat 34324575  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||||  |||| | ||||||||  ||||||||||    
T  34324576 tatcaattgatggattatttttcccaatattagggggagataata 34324620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 323
Target Start/End: Complemental strand, 15125522 - 15125430
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgacc-ttttactttgcaggaatcgaagagctttcttatttcaat 323  Q
    |||||| ||||||||| |||   |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  15125522 gttagcatgtaaatttgacaagctcatttaatatggtcgacatttgtttgacctttttactttgcaggaatcaaagagctttctcatttcaat 15125430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 557 - 670
Target Start/End: Complemental strand, 14943172 - 14943058
Alignment:
Q  557 gtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaa 655  Q
    |||||||||  | ||| ||||||| ||||||| || |||| |||||||||||||||||||||  | |||||||||| ||||||||||||||||| |||||    
T  14943172 gtttccaagttggaaaatgggtcgtaaatcatttatagaaattctacaacactcaaactaccaacatctagggaaacgagttatacagaatgtaggtaaa 14943073  T
Q  656 ctgatttgtagacca 670  Q
    || ||||||||||||    
T  14943072 ctaatttgtagacca 14943058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 557 - 670
Target Start/End: Complemental strand, 15370765 - 15370651
Alignment:
Q  557 gtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaa 655  Q
    |||||||||  | ||| ||||||| ||||||| || |||| |||||||||||||||||||||  | |||||||||| ||||||||||||||||| |||||    
T  15370765 gtttccaagttggaaaatgggtcgtaaatcatttatagaaattctacaacactcaaactaccaacatctagggaaacgagttatacagaatgtaggtaaa 15370666  T
Q  656 ctgatttgtagacca 670  Q
    || ||||||||||||    
T  15370665 ctaatttgtagacca 15370651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 647
Target Start/End: Complemental strand, 20923449 - 20923363
Alignment:
Q  562 caagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatg 647  Q
    ||||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  20923449 caagccgaaaaatgggtcgcaaatcatttatagaaattctacaacactcaaactaccggcgtctagggaaacaagttatacaaaatg 20923363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 469 - 671
Target Start/End: Original strand, 17880957 - 17881162
Alignment:
Q  469 aaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatcta-gttattta-gtataaatagtagtttccaagc 566  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||   |  | || ||  || |||| |||||||||  ||||||| ||     
T  17880957 aaatgtgggacaagtagttgtcaaagatggaggaagtgttgatgatgggattagtcttttgccatttattttctttatgtataaataagagtttcctagt 17881056  T
Q  567 cgaaaagtgggtcgcaaatcatataaag-aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgta 665  Q
    || ||| | ||||||||||||| || || || |||| ||||||||||||||||  |   | ||||| |||||||||| ||||||||||||||||||| ||    
T  17881057 cggaaaataggtcgcaaatcatttatagaaactctaaaacactcaaactaccgatgcacatggaaacgagttatacataatgtatgtaaactgatttata 17881156  T
Q  666 gaccat 671  Q
    ||||||    
T  17881157 gaccat 17881162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 577 - 664
Target Start/End: Complemental strand, 11064294 - 11064206
Alignment:
Q  577 gtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    |||||||||||| || |||| |||||||||||||||||||||| ||  |||||||| |||||||||| |||||||||||| ||||||||    
T  11064294 gtcgcaaatcatttatagaaattctacaacactcaaactaccgacgcatagggaaacgagttatacataatgtatgtaaattgatttgt 11064206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 14961632 - 14961557
Alignment:
Q  249 acagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    ||||| ||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||||| |||||||||    
T  14961632 acagactcatttaatatggtcaatatttatttgacctttaactttgcaggaattgaagagctttctcatttcaatt 14961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 15391104 - 15391029
Alignment:
Q  249 acagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    ||||| ||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||||| |||||||||    
T  15391104 acagactcatttaatatggtcaatatttatttgacctttaactttgcaggaattgaagagctttctcatttcaatt 15391029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 26459404 - 26459467
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  26459404 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 26459467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 18098031 - 18098105
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    ||||||||| ||||| |||||  ||||||||||||||| |||||||||||| |||| ||||||||||||| ||||    
T  18098031 gttagcctgcaaattcaacaggctcatttaatatggtcaacatttgtttgaactttaactttgcaggaattgaag 18098105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 39631925 - 39631863
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||||||| || |||| |||||||||| || ||||||||||||||    
T  39631925 agagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccact 39631863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 389
Target Start/End: Complemental strand, 21668882 - 21668726
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    ||||| ||||||||| ||||   |||||||||||| || | ||||| |||| ||||||||||||||||||| |||| |||||| ||||| |||  |||||    
T  21668882 gttagtctgtaaattcaacatgctcatttaatatgctcaatatttggttgatcttttactttgcaggaatcaaaga-ctttctcatttctattaaagaat 21668784  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaa 389  Q
     |||||||    | || ||||| |||||||||  |||||||||| ||| |||||||||    
T  21668783 ttcgacgagaaatcaatcctaaagcgcataatcagagtttcgacaaagcaaggctgaa 21668726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 26458631 - 26458574
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcat 142  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  26458631 agataaatcttgaaagaatattgagaaaatatatttgatatgaatcttcatctatcat 26458574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 42164268 - 42164155
Alignment:
Q  104 attgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgt 203  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||  |||| ||||||  ||| |||||   ||  ||||||||||||||||| || ||    
T  42164268 attggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgcttacagcccggtaggttgattatcaattgatggtttggt 42164169  T
Q  204 ttttcaaatattag 217  Q
    ||| | ||||||||    
T  42164168 tttcccaatattag 42164155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 9560113 - 9560164
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  9560113 tcatttaatatggtcgacatttgattgagctttaactttgcaggaatcgaag 9560164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 33222452 - 33222389
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||| |||||| | ||| ||||| || ||||||||||||||    
T  33222452 cagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccact 33222389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 572672 - 572622
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatt 136  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  572672 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatt 572622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 12331437 - 12331363
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||| |||||||| |||||  | ||||||||||||| || ||| |||||||||| ||||||||||||||||||    
T  12331437 gttagcttgtaaattcaacaggcttatttaatatggtcaacgtttttttgacctttaactttgcaggaatcgaag 12331363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 14943471 - 14943390
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 337  Q
    |||||| |||||||| | ||||||||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| || |||||    
T  14943471 tcatttcatatggtcaatatttgtttgacctttaactttacaggaatcaaag-gctttctcatttcaattggaggatttcgac 14943390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 15371064 - 15370983
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 337  Q
    |||||| |||||||| | ||||||||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| || |||||    
T  15371064 tcatttcatatggtcaatatttgtttgacctttaactttacaggaatcaaag-gctttctcatttcaattggaggatttcgac 15370983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 43215265 - 43215203
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||||||| || ||||| ||||| ||| || ||||||||||||||    
T  43215265 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccact 43215203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 30442567 - 30442507
Alignment:
Q  19 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||| ||||||||| || ||||| ||||||||| || ||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccact 30442507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 342353 - 342266
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    ||||| ||| |||||||||||||||||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  342353 agatagatcttgaaagaatattgggaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 342266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 22760941 - 22760883
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||| || ||||| ||||||||| || ||| |||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccac 22760883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 42207048 - 42207163
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctcc----atttatcattaattgtgatgagtcaacttatttaaagcccataagact 181  Q
    |||||||| |||||||  ||||| |||||||||||||||| |||||||    || |||||||||||||  |||| |||||| |||| |||| |  ||  |    
T  42207048 gataaatcttgaaagataattggaaaaatatatttgatataaatctccatctatctatcattaattgtattgagccaacttgtttatagcctagtaggtt 42207147  T
Q  182 gattatcaattgatgg 197  Q
    ||||||||||||||||    
T  42207148 gattatcaattgatgg 42207163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 7801253 - 7801200
Alignment:
Q  25 tcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||| ||||| ||||||||| || ||| |||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccac 7801200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 14058333 - 14058273
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||  | ||| |||||||||    
T  14058333 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14058273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 14368361 - 14368301
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||  | ||| |||||||||    
T  14368361 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14368301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 7499922 - 7499981
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||| ||||| ||||| |||| |||| || ||||||||| ||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcact 7499981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 7721451 - 7721388
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||| ||||||||||| || ||| | ||||||||| || || |||||||||||    
T  7721451 cagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccact 7721388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 7744106 - 7744169
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||| ||||||||||||||| || ||||||| ||||||  || ||||| ||||||||    
T  7744106 cagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcctataccact 7744169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 522
Target Start/End: Complemental strand, 11064398 - 11064351
Alignment:
Q  475 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 522  Q
    ||||||||  |||||||||||||||||||||| |||||||||| ||||    
T  11064398 gggacaaacggttgtccaagatggaggaagtgctgatcatgggattag 11064351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 512
Target Start/End: Complemental strand, 12088522 - 12088483
Alignment:
Q  473 gtgggacaaatagttgtccaagatggaggaagtgttgatc 512  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  12088522 gtgggacaagcagttgtccaagatggaggaagtgttgatc 12088483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 23552199 - 23552137
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||| ||||||||||| || ||||| ||||||||| || ||| ||||| ||||    
T  23552199 agagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcact 23552137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 43590985 - 43590927
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||||||||||||||||| |||| || ||||| ||||||| | || |||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccac 43590927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 17041008 - 17041069
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||  || |||||||| |||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccact 17041069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 232 - 784
Target Start/End: Complemental strand, 11324186 - 11323645
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaa- 330  Q
    |||||| |||||||||||| |  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| | ||||| ||||     
T  11324186 gttagcttgtaaatttaactggctcatttaatatggtcgacatttgtttgacctataactttgcaggaatcgaagagctttcgtatataaattgaagaaa 11324087  T
Q  331 tctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaa 430  Q
    | ||||| |||| | || ||||||||||||   |||||||||||| ||| ||||| |         | || ||||||||||||||||||| |||||||      
T  11324086 tttcgacaaagcatcaagcctaaggcgcat---tggagtttcgacaaagcaaggcag---------tttcgcgtcgaagacaagcaaaagggcgggaag- 11324000  T
Q  431 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctc 530  Q
    |||||| |||||||| || || ||||||||||||| ||||| ||||| ||| | ||||||||||||||| |||||||||||||| |  ||||||  || |    
T  11323999 cacgatttcaagcaaggaagcggtttccttttagtggaaaacgtggggcaagtggttgtccaagatggaagaagtgttgatcattgagttagtggttcac 11323900  T
Q  531 tatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaa 630  Q
     |||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| | |||||| |||||||||||||||||||||||||| ||    
T  11323899 catctagttatttagtataaataatagtttccaagtcggaaagtgggtcgcaaatcatatacataattcttcaacactcaaactaccggcgtctaggaaa 11323800  T
Q  631 atgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattca-ttgca-ttctaccttttccatgagtttacgtgcgtaaaat 728  Q
    | |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || ||||| || ||| |||| | |||||||||||| ||||| |    
T  11323799 acgagttatacagaatgtatgtaaactgatttgtagacca-cccttatattttaatgcatttgcatttttacttttttcttgagtttacgtgggtaaact 11323701  T
Q  729 tacttttatcttgctttattttaagctttttacttgcaaactcaaacttgtcgaga 784  Q
    |||||||||||||||||||||||||| ||||  | |||  ||||||| ||||||||    
T  11323700 tacttttatcttgctttattttaagcctttttatcgcattctcaaacctgtcgaga 11323645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 485 - 696
Target Start/End: Original strand, 20478170 - 20478378
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaa 584  Q
    |||||||||||||||| ||||| |||||||||| ||||||  || | |||||| | |||||||||||||  ||||||||||| | ||| |||||||||||    
T  20478170 gttgtccaagatggagaaagtgctgatcatgggtttagtggttcgccatctaggtgtttagtataaataagagtttccaagctggaaaatgggtcgcaaa 20478269  T
Q  585 tcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttatttta 684  Q
    ||||||| | ||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  20478270 tcatatacataattctacaacactcaaactaccggcg-cgagggaaacgagttatacagaatgtatgtaaactgatttgtagacca--cctttaatttta 20478366  T
Q  685 attcattgcatt 696  Q
    ||  ||||||||    
T  20478367 atgaattgcatt 20478378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 492 - 726
Target Start/End: Complemental strand, 13822165 - 13821934
Alignment:
Q  492 aagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatata 591  Q
    |||||||  |||||| |||||||||| ||||||  || | |  ||| | |||||||||||||   |||||||||||| ||| ||| ||||||||||| ||    
T  13822165 aagatgggagaagtgctgatcatggggttagtggttcgccagttaggtttttagtataaataagtgtttccaagccggaaaatggatcgcaaatcattta 13822066  T
Q  592 aagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcatt 691  Q
     |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||   ||||||||||| || |    
T  13822065 tagaattctacaacactcaaactaccgacgtctagggaaacgagttatacaaaatgtatgtaaactgatttgtagaccatc---tttattttaatgcaat 13821969  T
Q  692 gcattctaccttttccatgagtttacgtgcgtaaa 726  Q
    ||||| ||| ||| |  | ||||||||||||||||    
T  13821968 gcattttacttttcctttaagtttacgtgcgtaaa 13821934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 541 - 726
Target Start/End: Original strand, 27597709 - 27597891
Alignment:
Q  541 tttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttata 640  Q
    |||||||||||||   |||||||||||| ||| ||||||| ||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  27597709 tttagtataaataagtgtttccaagccggaaaatgggtcgtaaatcatttatagaattctacaacactcaaactaccggcgtctaaggaaacgagttata 27597808  T
Q  641 cagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaa 726  Q
    ||||||||||||||||||||||||| ||||   | |||||||||||  | |||||| ||||||| |  | ||||||||||| ||||    
T  27597809 cagaatgtatgtaaactgatttgtatacca---cctttattttaatgtaatgcattatacctttcctttaagtttacgtgcttaaa 27597891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 233 - 567
Target Start/End: Original strand, 25568175 - 25568507
Alignment:
Q  233 ttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatc 332  Q
    |||||||||||||| |||||| ||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||  |||||||  |||| ||    
T  25568175 ttagcctgtaaattcaacagactcatttaatatggtcaatatttgtttgacctttaactttgcaggaatcaaagagctttctcttttcaatccgagagtc 25568274  T
Q  333 tcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaa--aagagcgggaaaa 430  Q
    |||||||  | | || ||||  ||||||| |   ||||||||| ||| ||||||||||||||| || ||  ||||   |||||||  ||| ||||||||     
T  25568275 tcgacgagacatcaagcctagagcgcatagtcaaagtttcgacaaagcaaggctgaaagagcattcgca--tcgagttcaagcaatcaag-gcgggaaag 25568371  T
Q  431 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctc 530  Q
    |||||| | ||||| | || | |||||| |||||| | ||||||||| |||   |||||||||||||||| ||||| |||||||||| ||||||  || |    
T  25568372 cacgattttaagcattaagacggtttcc-tttagt-ggaaatgtggggcaagcggttgtccaagatggagaaagtgctgatcatggggttagtggttcgc 25568469  T
Q  531 tatcta-gttatttagtataaatagtagtttccaagcc 567  Q
     ||||| ||| |||||||||||||  ||||||||||||    
T  25568470 catctaggttttttagtataaataagagtttccaagcc 25568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 542 - 670
Target Start/End: Original strand, 27189979 - 27190108
Alignment:
Q  542 ttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatata-aagaattctacaacactcaaactaccggcgtctagggaaatgagttata 640  Q
    ||||||||| |||  ||||||||| |||||| ||||||||||||||| || || |||||||||||||||||||||||| |||||||||||| ||||||||    
T  27189979 ttagtataattaggtgtttccaagtcgaaaaatgggtcgcaaatcatttataaaaattctacaacactcaaactaccgacgtctagggaaacgagttata 27190078  T
Q  641 cagaatgtatgtaaactgatttgtagacca 670  Q
    | ||||||| ||||||||||||||||||||    
T  27190079 ctgaatgtacgtaaactgatttgtagacca 27190108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 542 - 670
Target Start/End: Original strand, 27839793 - 27839922
Alignment:
Q  542 ttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatata-aagaattctacaacactcaaactaccggcgtctagggaaatgagttata 640  Q
    ||||||||| |||  ||||||||| |||||| ||||||||||||||| || || |||||||||||||||||||||||| |||||||||||| ||||||||    
T  27839793 ttagtataattaggtgtttccaagtcgaaaaatgggtcgcaaatcatttataaaaattctacaacactcaaactaccgacgtctagggaaacgagttata 27839892  T
Q  641 cagaatgtatgtaaactgatttgtagacca 670  Q
    | ||||||| ||||||||||||||||||||    
T  27839893 ctgaatgtacgtaaactgatttgtagacca 27839922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 1523868 - 1524008
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| || | |  || ||||||    
T  1523868 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatatatcattaattgtattgagccaacttgtttacagtctagtaggctgatt 1523967  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagata 226  Q
    |||||||||||| || ||||| | ||||||||  |||||||    
T  1523968 atcaattgatggtttggttttcccaatattagggggagata 1524008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 485 - 648
Target Start/End: Complemental strand, 22803133 - 22802969
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatt-tagtataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    ||||||||||||||| |||||| |||||||||| ||||||  ||   || ||| | || |||||||||||   ||||||||| || ||| ||||||||||    
T  22803133 gttgtccaagatggacgaagtgatgatcatggggttagtggttcgtcatttaggttttctagtataaataagtgtttccaagtcggaaaatgggtcgcaa 22803034  T
Q  584 atcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgt 648  Q
    ||||| || | ||||||||||||||||||||||||||||||| |||||  | |||||||||||||    
T  22803033 atcatttataaaattctacaacactcaaactaccggcgtctaaggaaacaatttatacagaatgt 22802969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 634415 - 634546
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  634415 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 634514  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  634515 atcaattgatggtttggttttcccaatattag 634546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 7386829 - 7386699
Alignment:
Q  98 aagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatgg 197  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||||||||  |||| ||||||||||| |||| |  || ||||||||||||||||||    
T  7386829 aagaatattgagaaaa-atatttgatatgaatctccatctatcattaattgtattgagccaacttatttacagcctagtagtctgattatcaattgatgg 7386731  T
Q  198 attcgtttttcaaatattagaaggagataata 229  Q
    ||   |||||| ||||||||  ||||||||||    
T  7386730 atcaatttttccaatattagggggagataata 7386699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 7911989 - 7911858
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  7911989 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 7911890  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  7911889 atcaattgatggtttggttttcccaatattag 7911858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 14896916 - 14897047
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  14896916 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 14897015  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  14897016 atcaattgatggtttggttttcccaatattag 14897047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 19087578 - 19087681
Alignment:
Q  97 aaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatg 196  Q
    ||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||| ||||||  ||  |||| |||||||||||    
T  19087578 aaagaatattgagaaaatatatttgatatgaatctcaatctattattaattgtgatgagccaacttatttatagcccagtaggttgatcatcaattgatg 19087677  T
Q  197 gatt 200  Q
    ||||    
T  19087678 gatt 19087681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 22428479 - 22428610
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  22428479 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 22428578  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  22428579 atcaattgatggtttggttttcccaatattag 22428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 25228964 - 25229035
Alignment:
Q  95 tgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttattt 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  25228964 tgaaagaatattgggaaaatatatttgatatgaatctccatctatcattaattgtgttgagccaacttattt 25229035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 545 - 670
Target Start/End: Complemental strand, 23780834 - 23780708
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| || || ||| ||| | ||||||||| || |||| |||||||||||||||||||||  |||||||||||| ||||||||||     
T  23780834 gtataaataagagtttcctagtcggaaaatggtttgcaaatcatttatagaaattctacaacactcaaactaccaacgtctagggaaacgagttatacat 23780735  T
Q  644 aatgtatgtaaactgatttgtagacca 670  Q
    |||||||||||||| ||||||||||||    
T  23780734 aatgtatgtaaacttatttgtagacca 23780708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 19279742 - 19279660
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttct 314  Q
    |||||||||||||||| ||||  |||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  19279742 gttagcctgtaaatttgacaggctcatttaacatggtcaacatttttttgacctttaactttgcaggaatcgaagagctttct 19279660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 26697265 - 26697378
Alignment:
Q  104 attgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgt 203  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| |||| |  || |||||||||||||||||| || ||    
T  26697265 attgggaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgtttacagcctagtaggctgattatcaattgatggtttggt 26697364  T
Q  204 ttttcaaatattag 217  Q
    ||| | ||||||||    
T  26697365 tttcccaatattag 26697378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 22434078 - 22434218
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||| | |||| |||| |  ||  |||||    
T  22434078 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacatgtttacagcctactaggttgatt 22434177  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagata 226  Q
    |||||||||||| || ||||| | ||||||||  |||||||    
T  22434178 atcaattgatggtttggttttcccaatattagggggagata 22434218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 14888850 - 14888981
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||| ||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||  |  || ||||||    
T  14888850 gataaatcttgaaagaatattggaaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcatagtaggctgatt 14888949  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  14888950 atcaattgatggtttggttttcccaatattag 14888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 16445389 - 16445247
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    ||||||||  ||||||||||||  |||| ||||||||||||||||||||| |||| |||| |||  |||| ||||||||||| |||| |  || |||| |    
T  16445389 gataaatctcgaaagaatattgaaaaaaaatatttgatatgaatctccatctatccttaactgtattgagccaacttatttacagcctagtaggctga-t 16445291  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  16445290 atcaattgatggattagttttcccaatattagggggagataata 16445247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 43775128 - 43775259
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||| ||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| | || |  || ||||||    
T  43775128 gataaatcttgaaagaatattggaaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacttgtttacaccctagtaggctgatt 43775227  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  43775228 atcaattgatggtttggttttcccaatattag 43775259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 545 - 670
Target Start/End: Complemental strand, 25576852 - 25576727
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  |||||||||| || ||| ||||| ||||||||| ||  ||| ||||||||||||||||||| |||||| |||||||| |||| |||||     
T  25576852 gtataaataagagtttccaagtcggaaaatgggttgcaaatcat-tattgaaattctacaacactcaaactagcggcgtttagggaaacgagtaatacat 25576754  T
Q  644 aatgtatgtaaactgatttgtagacca 670  Q
    |||||||| |||||||||| |||||||    
T  25576753 aatgtatgaaaactgatttttagacca 25576727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 634 - 735
Target Start/End: Original strand, 25568508 - 25568609
Alignment:
Q  634 agttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattactt 733  Q
    ||||||||| |||| |||||||||| |||||||| || ||||||  ||||||| || |||||| |||||||||  |||||||||||||||||| ||||||    
T  25568508 agttatacataatgcatgtaaactggtttgtagatcacccctttatttttaatgcaatgcattttaccttttctttgagtttacgtgcgtaaacttactt 25568607  T
Q  734 tt 735  Q
    ||    
T  25568608 tt 25568609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 27597416 - 27597503
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttc 320  Q
    ||||||||| || ||| ||||  || |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  27597416 gttagcctgaaattttgacaggctcgtttaatatggtcaacatttgtttgaccttttactttgcaggaatcgaaga-ctttctcatttc 27597503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 20477925 - 20477999
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||| |||||||| ||||   |||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  20477925 gttagcatgtaaattcaacatgctcatttaatatggtcatcatttgtttaaccttttactttgcaggaatcgaag 20477999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 21291594 - 21291469
Alignment:
Q  97 aaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatg 196  Q
    ||||||||||||||||| ||||||||||||||||||||| |       |||||  |||| ||||||||||| |||| |  || ||||||||||| |||||    
T  21291594 aaagaatattgggaaaaaatatttgatatgaatctccatct-------attgtattgagccaacttatttacagcctagtaggctgattatcaactgatg 21291502  T
Q  197 gattcgtttttcaaatattagaaggagataata 229  Q
    |||| ||||| | ||||||||  ||||||||||    
T  21291501 gattagttttcccaatattagggggagataata 21291469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 27189695 - 27189764
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattg 325  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||  ||||| ||||||||||    
T  27189695 tcatttaatatggtcaacatttgtttgacctttaactttgtaggaatcgaaga-ttttctcatttcaattg 27189764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 27839509 - 27839578
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattg 325  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||  ||||| ||||||||||    
T  27839509 tcatttaatatggtcaacatttgtttgacctttaactttgtaggaatcgaaga-ttttctcatttcaattg 27839578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 42327392 - 42327452
Alignment:
Q  19 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 42327452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 595 - 706
Target Start/End: Original strand, 31404072 - 31404181
Alignment:
Q  595 aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtag-accatcccttttattttaattcattgc 693  Q
    ||||||| ||||||| || |||||||| | || |||| ||||||||||||||||||||||| |||||||| | ||||  |||||||||||||| || |||    
T  31404072 aattctaaaacactcgaagtaccggcg-cgagagaaaagagttatacagaatgtatgtaaaatgatttgtcgaacca--ccttttattttaatgcaatgc 31404168  T
Q  694 attctaccttttc 706  Q
    | | |||||||||    
T  31404169 aatttaccttttc 31404181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 28760652 - 28760711
Alignment:
Q  605 cactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||| || ||||||||||||| |||| |||| ||| |||||||||||||||||||||||    
T  28760652 cactcgaagtaccggcgtctagagaaaagagtcatatagaatgtatgtaaactgatttgt 28760711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 29503349 - 29503290
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||| || ||||| ||||||||| || || |||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccact 29503290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 40416384 - 40416447
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||| | || |||||||||||||||  | ||| ||||||||||    
T  40416384 cagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccact 40416447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 19322849 - 19322787
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||| |||| ||||||||||||| ||||| ||||||||| || || |||||||||||    
T  19322849 agagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccact 19322787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 642
Target Start/End: Complemental strand, 25597687 - 25597589
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaat-tctacaacactcaaactaccggcgtctagggaaatgagttataca 642  Q
    |||||||||  |||||||||| || |||   ||||||||||||| || ||||  |||||||||||||||||||| | ||||| ||||| ||||||||||    
T  25597687 gtataaataagagtttccaagtcggaaaacaggtcgcaaatcatttatagaaactctacaacactcaaactacctgtgtctacggaaacgagttataca 25597589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 37480153 - 37480095
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||| || ||||| |||| |||| || |||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccac 37480095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 19439579 - 19439506
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  19439579 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 19439506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 25447105 - 25447032
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  25447105 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 25447032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 4262298 - 4262354
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaata 74  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||| || |||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 575 - 662
Target Start/End: Original strand, 28140111 - 28140199
Alignment:
Q  575 gggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgattt 662  Q
    ||||| |||||||| || |||| |||||||| ||||||||||| | |   |||||||| |||||||||| |||||||||||| ||||||    
T  28140111 gggtcacaaatcatttatagaaattctacaatactcaaactactgacacatagggaaacgagttatacataatgtatgtaaattgattt 28140199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 42922497 - 42922433
Alignment:
Q  16 cagagagaatcgaacctgagacc-ttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||| |||| || ||||| |||||||||  | ||||||||||||||    
T  42922497 cagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccact 42922433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 9923771 - 9923806
Alignment:
Q  100 gaatattgggaaaatatatttgatatgaatctccat 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9923771 gaatattggaaaaatatatttgatatgaatctccat 9923806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 11251169 - 11251106
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||| ||||||||||||||| || ||||| ||| ||| | || ||||||||||||||    
T  11251169 cagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccact 11251106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 22382237 - 22382293
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||| ||||||||||| |||||||  ||||||||| |||||| |||||||||    
T  22382237 gagaatcgaacttgagaccttgaggatgagc--actcccaggtccaaagtcaataccac 22382293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 22914263 - 22914319
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||| ||||||||||| |||||||  ||||||||| |||||| |||||||||    
T  22914263 gagaatcgaacttgagaccttgaggatgagc--actcccaggtccaaagtcaataccac 22914319  T

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Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 23781145 - 23781070
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaaga 307  Q
    ||||| |||||| || |||||  ||||||||| ||||| ||||||  ||||| ||| |||||||||||||||||||    
T  23781145 gttagactgtaatttcaacaggctcatttaatgtggtcaacatttagttgacttttaactttgcaggaatcgaaga 23781070  T

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Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 522
Target Start/End: Original strand, 27850745 - 27850792
Alignment:
Q  475 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 522  Q
    |||||||  |||||||||||||| ||||||||||||||||||| ||||    
T  27850745 gggacaagcagttgtccaagatgaaggaagtgttgatcatgggattag 27850792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 43289433 - 43289362
Alignment:
Q  101 aatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  43289433 aatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 43289362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 6859307 - 6859349
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactccca 59  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||    
T  6859307 agagagaatcgaacctgagactttgaagaggagcacactccca 6859349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 23052521 - 23052579
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||| ||  |||| ||||||| | || |||||||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccac 23052579  T

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Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 39715070 - 39715012
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||||||||||||||||||| || || ||||| ||||||||| || ||| |||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccac 39715012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 19244191 - 19244130
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacca 77  Q
    ||||||||||||||||||||||||||  || ||||| |||| |||| || ||| ||||||||    
T  19244191 cagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaatacca 19244130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 42602634 - 42602573
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||| ||||| |||||||||  | ||||| ||||||||| || ||||||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccact 42602573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 232 - 740
Target Start/End: Complemental strand, 9072 - 8568
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||| || |||||||||||||||  ||||||||| ||||||    
T  9072 gttagcctgtaaatttaacaggctcatttaatatagtcgccatttgtttgaccttttactttgtagaaatcgaagagctttcacatttcaattagagaat 8973  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 431  Q
    ||||| ||| | |||| |||||| ||||||||  || ||||||||||| ||||||||||||| | |||| | || ||| ||| |||||| || ||||| |    
T  8972 ctcgatgaaacattaagcctaag-cgcataatcagaatttcgacgaagcaaggctgaaagagtaatctcgcatctaagtcaatcaaaag-gcaggaaagc 8875  T
Q  432 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctct 531  Q
    ||||| ||||||| |||  |  ||| | | |||| || |  ||||||||   |||||||||||| |||||||||| |||||||||  ||||||  || |     
T  8874 acgatttcaagcattgaaacgatttacatgtagtggagac-gtgggacaggcagttgtccaagacggaggaagtgctgatcatggagttagtggttcacc 8776  T
Q  532 atctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaa 631  Q
    |||||| | |||||||||||||  ||||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||    
T  8775 atctaggt-tttagtataaataagagtttccaagccggaaagtgggtcgcaaatcatatacagaactctacaacacttaaactaccgacgtctagggaaa 8677  T
Q  632 tgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattac 731  Q
     |||||||| |||||||||||||||||||||| |||||| ||||||||||||||| || |||||| |||| |||   |||||||||||| ||||| ||||    
T  8676 cgagttatatagaatgtatgtaaactgatttgcagaccaccccttttattttaatgcaatgcattttaccgtttttttgagtttacgtgtgtaaacttac 8577  T
Q  732 ttttatctt 740  Q
    |||||||||    
T  8576 ttttatctt 8568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 193; Significance: 1e-104; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 236 - 768
Target Start/End: Original strand, 11896 - 12424
Alignment:
Q  236 gcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcg 335  Q
    |||||||||||| ||||  ||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||   |  | ||||| ||||  |||    
T  11896 gcctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctttaaccttgcaggaatcgaagagcttttgcacataaattgaagaacttcg 11995  T
Q  336 acgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacga 435  Q
    || |||| | || ||||  ||| ||  |  || | ||||| ||| ||||||||||| |   | || |||| |||| ||| ||||| || ||||| |||||    
T  11996 acaaagcatcaagcctagagcgtatggtcagaatctcgacaaagcaaggctgaaagggtgtt-tcgcgtcaaagataagtaaaag-gcaggaaagcacga 12093  T
Q  436 tatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatct 535  Q
    | |||||||| ||| |  |||||||||||  |||||  |||||||| |||||||||||||||||| ||||| |||||||||||||||||  || | ||||    
T  12094 tttcaagcaaggagacgatttccttttagcggaaaacttgggacaagtagttgtccaagatggagtaagtgctgatcatgggcttagtggttcgccatct 12193  T
Q  536 agttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgag 635  Q
    || | ||||||||||||| || | ||||||||| ||| |||||||||||||||||| | |||||||||||||| ||||||| | ||||||||||||||||    
T  12194 agatttttagtataaatattaatatccaagccggaaattgggtcgcaaatcatatacaaaattctacaacacttaaactactgacgtctagggaaatgag 12293  T
Q  636 ttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattactttt 735  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| |  |||||| |||||||||| ||||||||| |||||||| ||| ||||    
T  12294 ttatacagaatgtatgtaaacttatttgtagaccaccccttttattttaatgcgatgcattttaccttttccttgagtttacatgcgtaaactta-tttt 12392  T
Q  736 atcttgctttattttaagctttttacttgcaaa 768  Q
    ||||||||||||||||||| |||||||||||||    
T  12393 atcttgctttattttaagc-ttttacttgcaaa 12424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 186; Significance: 1e-100; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 399 - 775
Target Start/End: Complemental strand, 269883 - 269508
Alignment:
Q  399 tcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatgg 498  Q
    |||||||||||||||| ||||| | |||||| |||||| |||||||| ||| | ||||||| ||| | ||||| ||||||||| ||| ||||||||||||    
T  269883 tcacgtcgaagacaagaaaaag-gtgggaaagcacgatttcaagcaaagagacggtttcctattaatggaaaacgtgggacaagtagctgtccaagatgg 269785  T
Q  499 aggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaat 597  Q
    |||||||| ||| |||||||||||||  || | |||||||| ||| ||||||||||||||||||||||  | |||||||||  ||||||||||| |||||    
T  269784 aggaagtgctgaacatgggcttagtggttcgccatctagtttttttagtataaatagtagtttccaagatggaaagtgggttacaaatcatatatagaat 269685  T
Q  598 tctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattc 697  Q
    ||||||| ||||||||||||||||||| |||||| || || |||| ||||||||||||| ||||||||||||| || |||||||||||| || ||||||     
T  269684 tctacaatactcaaactaccggcgtctggggaaacgatttttacataatgtatgtaaaccgatttgtagaccaccctttttattttaatgcaatgcattt 269585  T
Q  698 taccttttccatgagtttacgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaactcaaac 775  Q
    || ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  269584 tatcttttccttgagtttacgtgcgtaaacttacttttatcttcctttattttaagc-ttttacttgcaaactcaaac 269508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 486 - 707
Target Start/End: Complemental strand, 222875 - 222655
Alignment:
Q  486 ttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagtt-atttag-tataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    ||||||||||||||| || ||||||||||||| ||||||  |  |||  || || |||| | ||||||||  |||||||||| || ||| ||||||||||    
T  222875 ttgtccaagatggagaaattgttgatcatgggattagtgttttgctagttattttatttgggtataaataagagtttccaagtcggaaaatgggtcgcaa 222776  T
Q  584 atcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttatttt 683  Q
    ||||| ||  |||||||||||||||||||||| ||| ||||| ||||| |||||||| |||||||||||||||||||||| ||||||   ||||  ||||    
T  222775 atcatttattgaattctacaacactcaaactatcggtgtctaaggaaacgagttatatagaatgtatgtaaactgatttgcagacca---ctttactttt 222679  T
Q  684 aattcattgcattctaccttttcc 707  Q
    ||| || |||||| ||||||||||    
T  222678 aatgcaatgcattttaccttttcc 222655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 545 - 668
Target Start/End: Complemental strand, 50549 - 50425
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattct-acaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||| |||| || ||| ||||||||||||||| || | |||| | |||||||||||||||||||||||||||||||  |||||||||     
T  50549 gtataaataagagttttcaagtcggaaaatgggtcgcaaatcatttataaaatttttacaacactcaaactaccggcgtctagggaaacaagttatacaa 50450  T
Q  644 aatgtatgtaaactgatttgtagac 668  Q
    |||||||||||| ||||||||||||    
T  50449 aatgtatgtaaattgatttgtagac 50425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 223123 - 223051
Alignment:
Q  234 tagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||||||| ||  ||||  ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  223123 tagcctgtaatttcgacaggctcatttaatatggtcaacatttggttgacctttaactttgcaggaatcgaag 223051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 169; Significance: 3e-90; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 232 - 760
Target Start/End: Original strand, 54109 - 54645
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||||||||||| ||||  |||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||| | | ||  ||||     
T  54109 gttagcctgtaaatttcacaggctcatttgatatggtcgacatttatttgacctttaactttacaggaatcgaagagctttcgtatataagttaaagaag 54208  T
Q  332 ct-cgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaa 430  Q
    || |||  |||| | |  |||||||||||||| ||| ||| |||| | |||||||| ||||| || | || ||| ||||||||||||||| | |||||      
T  54209 cttcgataaagcatcacgcctaaggcgcataactggcgtt-cgacaatgtaaggctaaaagaacagtttcgcgttgaagacaagcaaaagggtgggaag- 54306  T
Q  431 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctc 530  Q
    |||||| ||||| ||  | ||  |||||||||||| ||||||||||||||| |  | ||| ||||||||| ||| | |||||||||||||||||  || |    
T  54307 cacgatttcaaggaaataagcgttttccttttagtggaaaatgtgggacaagtgatggtctaagatggagaaagggctgatcatgggcttagtggttcac 54406  T
Q  531 tatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaa 630  Q
     |||||| | | |||||||||||||||||||||||||| ||||  |||| ||||||||||| ||||||| ||| ||||||||||||  ||||||| ||||    
T  54407 catctaggtttgtagtataaatagtagtttccaagccggaaagaaggtcacaaatcatatacagaattcgacagcactcaaactacaagcgtctaaggaa 54506  T
Q  631 atgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcatt-gcattctac-cttttccatgagtttacgtgcgtaaaat 728  Q
    | |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||| |||  |||||| ||||||| |||| ||||| |    
T  54507 acgagttatacagaatgtatctaaactgatttgtagaccaccccttttattttaatgcattcgcattttacttttttccgtgagtttgcgtgtgtaaact 54606  T
Q  729 ta-------cttttatcttgctttattttaagcttttta 760  Q
    ||       ||||||||||||||||||||||||||||||    
T  54607 tacttttatcttttatcttgctttattttaagcttttta 54645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 600 - 670
Target Start/End: Original strand, 20487 - 20557
Alignment:
Q  600 tacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||||||||||||||| |||||  |||||||  ||||||||||||||||||||| |  ||||||||||||    
T  20487 tacaacactcaaactactggcgtaaagggaaacaagttatacagaatgtatgtaagcaaatttgtagacca 20557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 20162 - 20237
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaaga 307  Q
    |||||||||||| ||| ||||| || |||||| ||||| ||||||  ||||| ||| ||||||||||||| |||||    
T  20162 gttagcctgtaattttgacagactcttttaatgtggtcaacatttagttgacttttaactttgcaggaattgaaga 20237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 135; Significance: 6e-70; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 572 - 770
Target Start/End: Original strand, 357766 - 357963
Alignment:
Q  572 agtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccat 671  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  357766 agtggttcgccaatcatataccgaattctacaacactcaaactaccgacgtctagggaaacaagttatacagaatgtatgtaaactgatttgtagaccat 357865  T
Q  672 cccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaact 770  Q
    |||||||||||||||  | |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  357866 cccttttattttaatgtaatgcattttaccttttccttgagtttacgtgcgtaaacttacttttatcttgctttattataagc-ttttacttgcaaact 357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 232 - 524
Target Start/End: Original strand, 357479 - 357769
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||| ||||||||| ||||  ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||| |||      
T  357479 gttagcgtgtaaatttgacaggctcatttaatatggacaacatttgtttgacctttaactttgcaggaatcgaagagctttcgtatataaattgaagagc 357578  T
Q  332 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 431  Q
     ||||| |||  | || ||||  | | ||  |  || | ||||| ||| ||||||||||||    | || ||||||||||||||||||| || ||||| |    
T  357579 ttcgacaaaggatcaagcctagagtgtattgtcagaatctcgacaaagcaaggctgaaagaatgtt-tcgcgtcgaagacaagcaaaag-gcaggaaagc 357676  T
Q  432 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 524  Q
    ||||| |||||||| ||| ||||||||||| ||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  357677 acgatttcaagcaaggagacagtttcctttgagtggaaaacgtgggacaagtagttgtctaagatggaggaagtgttgatcatgggcttagtg 357769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 347699 - 347568
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  347699 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 347600  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  347599 atcaattgatggtttggttttcccaatattag 347568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 545 - 671
Target Start/End: Complemental strand, 377160 - 377033
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| || || ||| ||||| ||||||||| || |||| || ||||||||||||||||||||||   ||||||| |||||||| ||    
T  377160 gtataaataagagtttcctagtcggaaaatgggttgcaaatcatttatagaaattttacaacactcaaactaccggcgcacagggaaacgagttataaag 377061  T
Q  644 aatgtatgtaaactgatttgtagaccat 671  Q
    |||||||||||| ||||||||| |||||    
T  377060 aatgtatgtaaattgatttgtaaaccat 377033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 306
Target Start/End: Complemental strand, 378768 - 378687
Alignment:
Q  225 taatacggttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||| |||||| ||||| ||  ||||  ||||||||| ||||| ||||||  ||||| ||| ||||||||||||||||||    
T  378768 taatactgttagcttgtaatttcgacaggctcatttaatgtggtcaacatttagttgacttttaactttgcaggaatcgaag 378687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 6e-67; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 402 - 760
Target Start/End: Complemental strand, 16075875 - 16075511
Alignment:
Q  402 cgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggagg 501  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||  ||||||||||| | | || || ||||   |||| ||||||||| |||||||    
T  16075875 cgtcgaagacaagcaaaagagcgggaag-cacgat-tcaagcaatgaaacagtttcctttaa-tggagaacgtggagaaaatggttgtccaaaatggagg 16075779  T
Q  502 aagtgttgatcatgggcttagtgactctctatctagt-tatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattct 600  Q
    |||||||||||||||  ||| ||   | | || |||  | |||||||||||||||||||| ||||||| |||| ||||||||||||||||| | ||||||    
T  16075778 aagtgttgatcatggagttaatggtccaccatttagggtttttagtataaatagtagtttacaagccggaaagagggtcgcaaatcatatacataattct 16075679  T
Q  601 acaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctac 700  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||| || |  |||||||||||| |||| |||| |||    
T  16075678 acaacactcatactatcggcgtctagggaaacgagttatacagaatgtatgaaaactgatttctagaacacctattttattttaatgcattacattttac 16075579  T
Q  701 -cttttccatgagtttacgtgcgtaaaatta-------cttttatcttgctttattttaagcttttta 760  Q
      |||||| |||||||||||||||||| |||       ||||||||||||||||||||||||||||||    
T  16075578 ttttttccttgagtttacgtgcgtaaacttacttttatcttttatcttgctttattttaagcttttta 16075511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 484 - 729
Target Start/End: Complemental strand, 17987710 - 17987467
Alignment:
Q  484 agttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    |||||||||| |||||||||||| |||||||||| ||||||  || | |  ||| | |||||||||||||   |||||||||||| ||||||||||||||    
T  17987710 agttgtccaaaatggaggaagtgctgatcatggggttagtggttcgccagttaggtttttagtataaataagtgtttccaagccggaaagtgggtcgcaa 17987611  T
Q  584 atcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttatttt 683  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||||  ||||    
T  17987610 atcatatacagaattctaaaacactcaaactaccgacgtctagggaaacgagttatacagaatgtatgtagactgatttgtagacca--cctttattttt 17987513  T
Q  684 aattcattgcattctaccttttccatgagtttacgtgcgtaaaatt 729  Q
    ||| || |||||| ||||||| |  |||||||||||||||||||||    
T  17987512 aatgcaatgcattttacctttcctttgagtttacgtgcgtaaaatt 17987467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 541 - 745
Target Start/End: Original strand, 23779048 - 23779253
Alignment:
Q  541 tttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagtt-at 639  Q
    |||| ||||||||||||||||||||| |  || | |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  23779048 tttattataaatagtagtttccaagctgggaaataggtcgcaaatcatatatagaattctacaacactcaaactacgggcgtctagggaaacgagttaat 23779147  T
Q  640 acagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattacttttatct 739  Q
    ||||| |||||||||||| |||||||||| | ||||||||||||||| || |  ||| |||||||||| |||||||||||||||||| ||||||||||||    
T  23779148 acagagtgtatgtaaacttatttgtagactaccccttttattttaatgcaatatattttaccttttccttgagtttacgtgcgtaaacttacttttatct 23779247  T
Q  740 tgcttt 745  Q
    | ||||    
T  23779248 ttcttt 23779253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 541 - 745
Target Start/End: Original strand, 23866001 - 23866206
Alignment:
Q  541 tttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagtt-at 639  Q
    |||| ||||||||||||||||||||| |  || | |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  23866001 tttattataaatagtagtttccaagctgggaaataggtcgcaaatcatatatagaattctacaacactcaaactacgggcgtctagggaaacgagttaat 23866100  T
Q  640 acagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttccatgagtttacgtgcgtaaaattacttttatct 739  Q
    ||||| |||||||||||| |||||||||| | ||||||||||||||| || |  ||| |||||||||| |||||||||||||||||| ||||||||||||    
T  23866101 acagagtgtatgtaaacttatttgtagactaccccttttattttaatgcaatatattttaccttttccttgagtttacgtgcgtaaacttacttttatct 23866200  T
Q  740 tgcttt 745  Q
    | ||||    
T  23866201 ttcttt 23866206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 608 - 736
Target Start/End: Complemental strand, 25369284 - 25369156
Alignment:
Q  608 tcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttattttaattcattgcattctaccttttcc 707  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||||||||     
T  25369284 tcaaactaccggcgtctagggaaacgagttatacagaatgtatgtaaactgatttgtagaccaccccttttattttaatgcaatgcattttaccttttct 25369185  T
Q  708 atgagtttacgtgcgtaaaattactttta 736  Q
     |||||||||||||||||| |||||||||    
T  25369184 gtgagtttacgtgcgtaaacttactttta 25369156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 474 - 696
Target Start/End: Original strand, 24923896 - 24924115
Alignment:
Q  474 tgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaa 572  Q
    |||| |||| ||||| |||||||||||||||||||||||||||| ||||||  || | |  ||||||||| ||||| ||||   |||||||||||| |||    
T  24923896 tggggcaaacagttgcccaagatggaggaagtgttgatcatgggattagtggttcaccagttagttattttagtattaataaatgtttccaagccggaaa 24923995  T
Q  573 gtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatc 672  Q
     |||||||| |||||| || |||||||||||||||||||||||||  |||||||||||| |||||| ||| ||||||||||||||||||||||||||       
T  24923996 atgggtcgctaatcatttatagaattctacaacactcaaactacctacgtctagggaaacgagtta-acataatgtatgtaaactgatttgtagaccg-- 24924092  T
Q  673 ccttttattttaattcattgcatt 696  Q
     | ||||||||||| |||||||||    
T  24924093 -catttattttaatgcattgcatt 24924115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 485 - 670
Target Start/End: Complemental strand, 22806501 - 22806315
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactct-ctatctagttatttag-tataaatagtagtttccaagccgaaaagtgggtcgca 582  Q
    |||||||||||||||| ||||| |||||||||| |||||| |||| | |  || || ||||| ||||||||  |||||||||| || ||| |||||||||    
T  22806501 gttgtccaagatggagaaagtgctgatcatgggattagtg-ctctgccacttatttttttaggtataaataagagtttccaagtcggaaa-tgggtcgca 22806404  T
Q  583 aatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||||| ||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22806403 aatcatttaaagaaattctacaacactcaaactaccgatgtctaggaaaatgagttatacagaatgtatgtaaactgatttgtagacca 22806315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 18085208 - 18085064
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||| |||| |  || |||||    
T  18085208 agataaatcttgaaagaatattgggaaaatatatttgatataaatctccatctatcattaattgtgttaagccaacttatttacagcctagtaggctgat 18085109  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||||  |||| | ||||||||  ||||||||||    
T  18085108 tatcaattgatggattatttttcccaatattagggggagataata 18085064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 30959546 - 30959406
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| |||| |  || ||||||    
T  30959546 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgtttacagcctagtaggctgatt 30959447  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagata 226  Q
    |||||||||||| || ||||||| ||||||||  |||||||    
T  30959446 atcaattgatggtttggtttttccaatattagggggagata 30959406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 1533690 - 1533550
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| || | |  || ||||||    
T  1533690 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgtttacagtctagtaggctgatt 1533591  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagata 226  Q
    |||||||||||| || ||||| | ||||||||  |||||||    
T  1533590 atcaattgatggtttagttttcccaatattagggggagata 1533550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 17936340 - 17936461
Alignment:
Q  100 gaatattgggaaaatatatttgatat----gaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgat 195  Q
    ||||||||||||||||||||||||||    |||||||||| |||||||||||||| |||| ||||||||||| ||||||  || ||| ||||||||||||    
T  17936340 gaatattgggaaaatatatttgatatatatgaatctccatctatcattaattgtgttgagccaacttatttacagcccagtaggctgtttatcaattgat 17936439  T
Q  196 ggattcgtttttcaaatattag 217  Q
    ||||| ||||| | ||||||||    
T  17936440 ggattagttttcccaatattag 17936461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 28369008 - 28368877
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  28369008 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 28368909  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||| | ||||||||    
T  28368908 atcaattgatggtttggttttcccaatattag 28368877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 31105943 - 31105800
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    ||||||||  |||| ||||||||||||| |||||||||||||||| |||| ||||||||| |||  |||| ||||||||||| | || |  || ||||||    
T  31105943 gataaatctcgaaataatattgggaaaaaatatttgatatgaatccccatatatcattaactgtattgagccaacttatttacaacctagtaggctgatt 31105844  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  31105843 atcaattgatggattagttttcccaatattagggggagataata 31105800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 671
Target Start/End: Original strand, 22969328 - 22969518
Alignment:
Q  484 agttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagtta-tttag-tataaatagtagtttccaagccgaaaagtgggtcgc 581  Q
    |||||||||||||||||||||||||||||||||| |||||   |  | |  || ||  ||||| ||||||||  ||||||| ||  | ||| ||||||||    
T  22969328 agttgtccaagatggaggaagtgttgatcatgggattagtcttttgccagttattttctttaggtataaataagagtttcctagttggaaaatgggtcgc 22969427  T
Q  582 aaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccat 671  Q
    ||||||| || |||| ||||||||||| |||||||| ||||  |||||||| || ||||| ||||||||||||||||||||||||||||||    
T  22969428 aaatcatttatagaaattctacaacacccaaactacgggcgcatagggaaacgaattataaagaatgtatgtaaactgatttgtagaccat 22969518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 24923671 - 24923760
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaa 322  Q
    |||||| |||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  24923671 gttagcttgtaaattcaacaggctcatttaatatggtcaacatttgtttgaccttttactttgcaggaatcgaa-agctttctcatttcaa 24923760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 671
Target Start/End: Complemental strand, 22011308 - 22011119
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattta------gtataaatagtagtttccaagccgaaaagtgggt 578  Q
    |||||||||||||||||||||| |||||||||| |||||    || | |||||||||||       ||| |||||  ||||||| || || ||| |||||    
T  22011308 gttgtccaagatggaggaagtgctgatcatgggattagt----ctttttctagttattttccttatgtaaaaataagagtttcctagtcggaaaatgggt 22011213  T
Q  579 cgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccat 671  Q
    |||||||||| || |||| |||||||||| |||||||||||| |  ||||||||  |||||||||| ||||||||||| | |||||||||||||    
T  22011212 cgcaaatcatttatagaaattctacaacattcaaactaccggtgcatagggaaacaagttatacaggatgtatgtaaatttatttgtagaccat 22011119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 670
Target Start/End: Original strand, 22703486 - 22703674
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagtta--tttagtataaatagtagtttccaagccgaaaagtgggtcgca 582  Q
    |||||||||||||||| |||||||||||||||| ||||||  |  | |  |||||   ||| |||||||||  ||||| |||| || |||  ||||||||    
T  22703486 gttgtccaagatggagaaagtgttgatcatgggattagtgctttgccagttagtttcttttggtataaataagagttttcaagtcggaaaacgggtcgca 22703585  T
Q  583 aatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    |||||| || |||| |||| ||||||||||| ||||||||||| || |||  ||||||||| ||| ||||||| |||||||||||||||    
T  22703586 aatcatttatagaaattcttcaacactcaaattaccggcgtcttggaaaacaagttatacataatatatgtaagctgatttgtagacca 22703674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 17987934 - 17987865
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| || |||||||||    
T  17987934 tcatttaatatggtcaacatttgtttgacctttaactttgcagaaatcgaagagcttcctcatttcaatt 17987865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 26461245 - 26461101
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| ||||||||||||  ||||||| ||||||||||||||| ||| |||||| ||||||  |||| |||||| |||| | | ||  ||  ||||    
T  26461245 agataaatcttgaaagaatattaagaaaatacatttgatatgaatcttcatctatcataaattgtattgagccaacttgtttacaacacagtaggttgat 26461146  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||| |||| ||| ||| ||||||| ||||||||| ||||||||||    
T  26461145 tataaattaatgaattagtttttccaatattagatggagataata 26461101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 22806750 - 22806646
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||||||| ||  ||||| ||||| |||||| || ||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||| ||    
T  22806750 gttagcctgtaatttcgacagactcattaaatatgttcaacacttgtttgacctttaactttgcaggaatcgaa-agctttctcatttcaatttgaggat 22806652  T
Q  332 ctcgac 337  Q
     |||||    
T  22806651 ttcgac 22806646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 22011558 - 22011452
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    ||||| |||||| || |||||| ||||||||| ||||| ||||||| ||||| |||||||||||||||||||||| ||||| | |||| || | ||| ||    
T  22011558 gttagtctgtaatttcaacagattcatttaatgtggtcaacatttggttgactttttactttgcaggaatcgaag-gctttatcattttaacttgaggat 22011460  T
Q  332 ctcgacga 339  Q
    ||||||||    
T  22011459 ctcgacga 22011452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 545 - 662
Target Start/End: Original strand, 36196628 - 36196746
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| ||  ||||| | ||||||||||||| || |||| ||||||||||||||||||||||| |  |||| ||| |||||||| |     
T  36196628 gtataaataagagtttcccagtagaaaaataggtcgcaaatcatttatagaaattctacaacactcaaactaccggtgcataggaaaacgagttatatat 36196727  T
Q  644 aatgtatgtaaactgattt 662  Q
    |||||||||||| ||||||    
T  36196728 aatgtatgtaaattgattt 36196746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 16076047 - 16075966
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgttt-gaccttttactttgcaggaatcgaagagcttt 312  Q
    ||||| ||||||||||  |||  |||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  16076047 gttagtctgtaaatttctcaggttcatttaatatggtcgacatatgttttgaccattaactttgcaggaatcgaagagcttt 16075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 22703238 - 22703328
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    |||||||||||| ||  ||||  ||||||||||||||| ||||||||||| ||||| |||||||||||||| |||| |||||| |||||||||    
T  22703238 gttagcctgtaatttcgacagggtcatttaatatggtcaacatttgtttg-cctttaactttgcaggaatcaaaga-ctttctcatttcaatt 22703328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 575 - 661
Target Start/End: Complemental strand, 25769865 - 25769778
Alignment:
Q  575 gggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatt 661  Q
    |||||||||||||| || | || ||||||||||||||||||| |||||  ||||||||  ||||||| |||||||||||||| |||||    
T  25769865 gggtcgcaaatcatttatataaattctacaacactcaaactatcggcgcatagggaaacaagttatatagaatgtatgtaaattgatt 25769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 26078046 - 26078108
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||||||||||  |||||||||||| | || || |||||||||||    
T  26078046 agagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccact 26078108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 14285243 - 14285179
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccactc 80  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||  | |||||||| ||||||    
T  14285243 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactc 14285179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 624 - 667
Target Start/End: Original strand, 17810741 - 17810784
Alignment:
Q  624 tagggaaatgagttatacagaatgtatgtaaactgatttgtaga 667  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  17810741 tagggaaacgagttatacagaatgtatgtaaactgatttataga 17810784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 25627139 - 25627076
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||| || ||||| ||||||| |  | ||||||||||||||    
T  25627139 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccact 25627076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 34984888 - 34984825
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||| ||||||||| || ||||| |||||||||  | ||||||||||||||    
T  34984888 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccact 34984825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 16773889 - 16773827
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||||||||||||||||||||||| || || ||||| ||||||||| || ||| |||||||||    
T  16773889 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccac 16773827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 21173232 - 21173159
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  21173232 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 21173159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 23055420 - 23055347
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  23055420 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 23055347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 16671620 - 16671688
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttattta 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| ||||    
T  16671620 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgttta 16671688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 18786583 - 18786543
Alignment:
Q  97 aaagaatattgggaaaatatatttgatatgaatctccattt 137  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  18786583 aaagaatattggaaaaatatatttgaaatgaatctccattt 18786543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 43442278 - 43442234
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 60  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||    
T  43442278 cagagagaatcgaacctgagaccttgaggaggagcacactcccag 43442234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 30883196 - 30883255
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||| |||| ||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccact 30883255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 35266587 - 35266537
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgt 149  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||    
T  35266587 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgt 35266537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 664
Target Start/End: Original strand, 31533003 - 31533089
Alignment:
Q  576 ggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    ||||||||||||  || |||||||||   ||||| || ||||||||||||  |||| |||| ||| ||||||||||||| |||||||||    
T  31533003 ggtcgcaaatcacttatagaattctag--cactcgaagtaccggcgtctaaagaaaagagtcatagagaatgtatgtaatctgatttgt 31533089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 485 - 707
Target Start/End: Complemental strand, 17463 - 17245
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaa 584  Q
    ||||||||||||||||||||||  ||| ||||| ||||||  || | |  ||| | |||||||||||||   |||||||||||| ||| |||||| |||     
T  17463 gttgtccaagatggaggaagtgccgataatggggttagtggttcgccagttaggtttttagtataaataagtgtttccaagccggaaaatgggtcacaac 17364  T
Q  585 tcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcccttttatttta 684  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||   | |||||||||    
T  17363 tcatatatagaattctacaacactcaaactattggcgtctagggaaacgagttatacagaatgtatgtaaactgatttgtagacca---cctttatttta 17267  T
Q  685 attcattgcattctaccttttcc 707  Q
    || ||||||||| ||||||||||    
T  17266 atgcattgcatt-taccttttcc 17245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 17708 - 17638
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatc 302  Q
    ||||||||||||||| ||||   | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  17708 gttagcctgtaaattcaacaagcttatttaatatggtcaacatttgtttgaccttttactttgcaggaatc 17638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 475 - 704
Target Start/End: Complemental strand, 1511 - 1292
Alignment:
Q  475 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaata-gtagtttccaagccgaaaag 573  Q
    ||||||| | |||||||||||||||||||||| |||||||||| ||||||  || | |        ||||||||||||| ||| ||||||||||| |||     
T  1511 gggacaagtggttgtccaagatggaggaagtggtgatcatggggttagtggttcgccag-------tttagtataaataagta-tttccaagccggaaaa 1420  T
Q  574 tgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagaccatcc 673  Q
    | ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||       
T  1419 taggtcgcaaatcatttatagaattctacaacactcaaactaccggcgtctagggaaataagttatacagaatgtatgtaagcttatttgtagacca--- 1323  T
Q  674 cttttattttaattcattgcattctaccttt 704  Q
    | ||||||||||| || |||||| |||||||    
T  1322 cctttattttaatgcaatgcattttaccttt 1292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 3e-38; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 475 - 670
Target Start/End: Original strand, 12809851 - 12810048
Alignment:
Q  475 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaag 573  Q
    ||||||||  |||||||||||||||||||||| |||||||||| ||||||  ||   |  || |||||| ||||||||||   ||||||||| |  |||     
T  12809851 gggacaaacggttgtccaagatggaggaagtgctgatcatgggattagtggttcgacagttacttattttagtataaataagtgtttccaagtcagaaaa 12809950  T
Q  574 tgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||||||||| ||| || |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  12809951 tgggtcgcaaaccatttatagaaattctacaacactcaaactaccggcgtctggggaaacgagttatacagaatgtacgtaaactgatttgtagacca 12810048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 2926175 - 2926031
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| ||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||| |||| ||||||||||| ||||||  || |||||    
T  2926175 agataaatcttgaaagaatattgtgaaaaaatatttgatataaatctccatctatcattaattgtgttgagccaacttatttacagcccagtaggctgat 2926076  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||||  |||||  ||||||||  ||||||||||    
T  2926075 tatcaattgatggattatttttttcaatattagggggagataata 2926031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 13998061 - 13998209
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttg----atatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagac 180  Q
    ||||||||| |||||||||||||| ||||||||||||    |||||||||| ||| |||||||||||||| |||| ||||||||||| ||||||  || |    
T  13998061 agataaatcttgaaagaatattggaaaaatatatttggtatatatgaatcttcatctatcattaattgtgttgagccaacttatttacagcccaataggc 13998160  T
Q  181 tgattatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    |||||||||||||||||||| ||||||| ||||||||  ||||||||||    
T  13998161 tgattatcaattgatggattagtttttccaatattagggggagataata 13998209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 544 - 670
Target Start/End: Original strand, 14632688 - 14632815
Alignment:
Q  544 agtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttataca 642  Q
    ||||||||||  |||||| ||| || ||| | ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||| |||||||| |    
T  14632688 agtataaataagagtttcgaagtcggaaaataggtcgcaaatcatttatagaaattctacaacactcaaactaccggcgtctagggaaacgagttataaa 14632787  T
Q  643 gaatgtatgtaaactgatttgtagacca 670  Q
     |||||||||||||||||||||||||||    
T  14632788 taatgtatgtaaactgatttgtagacca 14632815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 12750861 - 12750716
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||| ||| ||  |  |||||    
T  12750861 agataaatcttgaaagaatattgggaaaatatatttgatataaatctccatctatcattaattgtgttgagccaacttatttacagctcagtacgctgat 12750762  T
Q  185 tatcaattgatggatt-cgtttttcaaatattagaaggagataata 229  Q
    |||||||||| |||||   |||||| ||||||||  ||||||||||    
T  12750761 tatcaattgaaggattatttttttccaatattagggggagataata 12750716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 535 - 670
Target Start/End: Original strand, 18558336 - 18558473
Alignment:
Q  535 tagttatt-tagtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaat 632  Q
    |||||||| |||||||||||   |||||||||| | ||| ||||||||||||||| || |||| ||||||||||||||||||||||| |||||||||||     
T  18558336 tagttattctagtataaataagtgtttccaagctggaaaatgggtcgcaaatcatttatagaaattctacaacactcaaactaccggtgtctagggaaac 18558435  T
Q  633 gagttatacagaatgtatgtaaactgatttgtagacca 670  Q
     ||||||||||||| |||||||||||||| ||| ||||    
T  18558436 aagttatacagaatatatgtaaactgattcgtaaacca 18558473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 545 - 668
Target Start/End: Original strand, 11888135 - 11888259
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| ||  | ||| |||||| |||||||| || |||| |||||||||| ||||||||| |||||||||||||| |||||||||||    
T  11888135 gtataaataagagtttcctagttggaaaatgggtcacaaatcatttatagaaattctacaacagtcaaactactggcgtctagggaaacgagttatacag 11888234  T
Q  644 aatgtatgtaaactgatttgtagac 668  Q
    |||||||||||||||||||||||||    
T  11888235 aatgtatgtaaactgatttgtagac 11888259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 20194619 - 20194488
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  20194619 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 20194520  T
Q  186 atcaattgatggattcgtttttcaaatattag 217  Q
    |||||||||||| || ||||||| ||||||||    
T  20194519 atcaattgatggtttggtttttccaatattag 20194488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 22747146 - 22747265
Alignment:
Q  110 aaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgtttttca 209  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||  ||||||  ||  |||||||||||||||||||| ||||| |     
T  22747146 aaaatatatttgatataaatctccatctatcattaattgtgttgagccaacttattttcagcccagtaggttgattatcaattgatggattagttttccc 22747245  T
Q  210 aatattagaaggagataata 229  Q
    ||||||||  ||||||||||    
T  22747246 aatattagggggagataata 22747265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 85 - 217
Target Start/End: Original strand, 19568589 - 19568721
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| ||||| |||||| | |||||||||||||||||||||||||| | |||||||||||  |||| |||||| |||| | | ||  ||  ||||    
T  19568589 agataaatcttgaaataatattagaaaaatatatttgatatgaatctccatctctcattaattgtattgagccaacttgtttacaactcaataggttgat 19568688  T
Q  185 tatcaattgatggattcgtttttcaaatattag 217  Q
    |||||||| ||||||| ||||| | ||||||||    
T  19568689 tatcaattaatggattagttttcctaatattag 19568721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 53980246 - 53980359
Alignment:
Q  104 attgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgt 203  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||  |||| ||||||  ||| ||||||  ||  ||||||||||||||||| || ||    
T  53980246 attggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgcttacagcccagtaggttgattatcaattgatggtttggt 53980345  T
Q  204 ttttcaaatattag 217  Q
    ||| | ||||||||    
T  53980346 tttcccaatattag 53980359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 545 - 671
Target Start/End: Complemental strand, 10070733 - 10070606
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| || || ||| ||||||||||||||| || |||| |||| |||||||||||||| |||||  |  |||||  |||||||||     
T  10070733 gtataaataagagtttcctagtcggaaaatgggtcgcaaatcatttatagaaattctgcaacactcaaactatcggcgcatgaggaaacaagttatacat 10070634  T
Q  644 aatgtatgtaaactgatttgtagaccat 671  Q
    |||||||||||| |||||| ||||||||    
T  10070633 aatgtatgtaaattgatttttagaccat 10070606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 37109345 - 37109408
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  37109345 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 37109408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 14632401 - 14632482
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 337  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||| |||| |||| ||| || |||||    
T  14632401 tcatttaatatggtcaacatttggttgacctttaactttgcaggaatcgaag-gctttctcatttaaatttgaggatttcgac 14632482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 49576890 - 49576950
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||||| || ||||| ||||||| | ||||||||||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccac 49576950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 23378037 - 23377975
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||||||||||||||||||||||| || ||||| ||||||||| || ||||||||| ||||    
T  23378037 agagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacact 23377975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 10071044 - 10070940
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 331  Q
    |||||||||||| ||  ||||  ||||||||||||||| ||||||  ||||| ||| |||||||||||||||||| ||||||| |||| |||| ||| ||    
T  10071044 gttagcctgtaatttcgacaggctcatttaatatggtcaacattttgttgacttttaactttgcaggaatcgaag-gctttctcattttaatttgaggat 10070946  T
Q  332 ctcgac 337  Q
     |||||    
T  10070945 ttcgac 10070940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 12809637 - 12809697
Alignment:
Q  258 tttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttattt 319  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  12809637 tttaatatggacaacatttgtttgacctttaactttgcaggaatcgaag-gctttctcattt 12809697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 7949448 - 7949508
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacc 76  Q
    ||||||||||||||||||||||||||| || ||||| ||||| ||| || |||||||||||    
T  7949448 cagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 38869850 - 38869787
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||| ||||||||||||||||||||| || ||||| ||||||||  || ||||||||||||||    
T  38869850 cagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccact 38869787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 7292793 - 7292855
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||| |||| || ||||| |||||||||  | ||||||||||||||    
T  7292793 agagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccact 7292855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 7539671 - 7539609
Alignment:
Q  17 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||  | ||||||||||||||  |||||  ||||||||||    
T  7539671 agagagaatcgaacctgagaccttgagaaggagcatactcccagatccaaaatcaataccact 7539609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 37274448 - 37274510
Alignment:
Q  11 agcagcagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaat 73  Q
    |||| ||||||||||||||||| ||||||||| || ||||| ||||||||| || ||||||||    
T  37274448 agcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 47592199 - 47592257
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcatt 143  Q
    ||||||||| |||| ||||| ||| |||||||||||||||||||||||||  |||||||    
T  47592199 agataaatcttgaaggaataatggaaaaatatatttgatatgaatctccaactatcatt 47592257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 1892597 - 1892524
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  1892597 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 1892524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 12661232 - 12661159
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  12661232 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 12661159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 1730478 - 1730546
Alignment:
Q  11 agcagcagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||| |||||||||| ||| ||||||| ||||||| ||||| |||| |||| || ||||||||||||||    
T  1730478 agcaccagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccact 1730546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 10048067 - 10047999
Alignment:
Q  11 agcagcagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||| ||||||||||||||||||||||| |||  | ||||||||||  ||| || ||||||||||||||    
T  10048067 agcatcagagagaatcgaacctgagaccatgagaaggagcatactcttaggtcccaagccaataccact 10047999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 24234725 - 24234665
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||| ||||||||| | |||||||| ||||||| | || |||||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccac 24234665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 656
Target Start/End: Complemental strand, 12424896 - 12424819
Alignment:
Q  575 gggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaac 656  Q
    |||||||||||||||||  ||||||||  |||||| || || |||||||||| |||| |||| ||||| |||||||||||||    
T  12424896 gggtcgcaaatcatata--gaattcta--acactcgaagtatcggcgtctagagaaaagagtcatacaaaatgtatgtaaac 12424819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 16581775 - 16581712
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||| ||| |||||||||||||||| || ||||| |||||||||  | ||||||||||||||    
T  16581775 cagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaataccact 16581712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 19680782 - 19680845
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||| ||||||||| || ||||| ||||||| | || |||| |||||||||    
T  19680782 cagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccact 19680845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 23192186 - 23192273
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    ||||| ||| |||||||||||||| ||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  23192186 agatagatcttgaaagaatattggtaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 23192273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 25693232 - 25693145
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    ||||| ||| |||||||||||||| ||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  25693232 agatagatcttgaaagaatattggtaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 25693145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 31759652 - 31759715
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||| ||||||||| |||||||||||| || ||||| ||||||| | || ||||||||||||||    
T  31759652 cagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccact 31759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 523
Target Start/End: Original strand, 14632628 - 14632666
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagt 523  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  14632628 gttgtccatgatggaggaagtgttgatcatgggattagt 14632666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 55427198 - 55427256
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||||||||||||||||||| ||  | ||||| ||||||||| || |||||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccac 55427256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2622389 - 2622446
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaat 73  Q
    |||||||||||||||||||||| | || || ||||| ||||||||| || ||||||||    
T  2622389 cagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 16330678 - 16330605
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    ||||||||| |||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  16330678 agaatattgagaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 16330605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 26995353 - 26995430
Alignment:
Q  152 tgagtcaacttatttaaagcccataagactgattatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    |||| ||||||||||| || |||  ||| |||||||||||| ||||||| ||||| | ||||||||  ||||||||||    
T  26995353 tgagccaacttatttacagtccagtagattgattatcaattaatggattagttttcccaatattagggggagataata 26995430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 111094 - 111238
Alignment:
Q  85 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 184  Q
    ||||||||| |||||||||||| |||||||  ||||||||||||||||||| |||||||||||||| |||| ||||||||||| |||| |  ||||||||    
T  111094 agataaatcttgaaagaatattaggaaaatcgatttgatatgaatctccatctatcattaattgtgctgagccaacttatttacagcctagtagactgat 111193  T
Q  185 tatcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||| |||||||||||| ||||||| ||||||||  ||||||||||    
T  111194 tatgaattgatggattagtttttccaatattagggggagataata 111238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 255 - 614
Target Start/End: Original strand, 40017 - 40377
Alignment:
Q  255 tcatttaatatggtcga-catttgtttgaccttttactttgcaggaatcgaagagctttcttattt-caattggagaatctcgacgaagctttaaaccta 352  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||| || || |  |||||||||| |   | || ||||    
T  40017 tcatttaatatggtcaaacatttgtttgacctttaactttgcaggaatcgaagagctttctcattttcatttaggaaatctcgacggaatatcaagccta 40116  T
Q  353 aggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggca 452  Q
      ||| | || | || ||||||| |||||| ||| ||| || |   |||||| |||| |||||||||  | |||||| |||||| ||||||| |||  |     
T  40117 gagcgaaaaactagattttcgacaaagtaaagctcaaaaagaaaattcacgttgaagtcaagcaaaaaggggggaaagcacgatttcaagcattgaaacg 40216  T
Q  453 gtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaat 552  Q
    ||||||   |||| || |  ||||||||   ||||||||||||||||||||||| |||||||||  ||||||  ||   |||||| | ||||||||||||    
T  40217 gtttccaggtagtggagac-gtgggacaggaagttgtccaagatggaggaagtgatgatcatggagttagtggttcgtcatctagatttttagtataaat 40315  T
Q  553 agtagtttccaagccgaaaagtgggtcgcaaatcatataaagaattctacaacactcaaact 614  Q
    |||| ||||||||||  |||||||||| ||||||||||| | |||||| |||||||||||||    
T  40316 agtattttccaagccagaaagtgggtcacaaatcatatacaaaattcttcaacactcaaact 40377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 72; Significance: 3e-32; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 485 - 670
Target Start/End: Complemental strand, 184664 - 184477
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttattt-agtataaatagtagtttccaagccgaaaagtgggtcgcaa 583  Q
    |||||||| |||||||||||||||||||||||| |||||      | |  || || ||| ||||||||||  |||||| ||| || ||| | ||||||||    
T  184664 gttgtccatgatggaggaagtgttgatcatgggattagtcttgtgccagttatttctttaagtataaataagagtttcgaagtcggaaaataggtcgcaa 184565  T
Q  584 atcatataaag-aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtagacca 670  Q
    ||||| || || ||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||    
T  184564 atcatttatagaaattctacaacactcaaactaccggcgtctagggaaacgagttataaataatgtatgtaaactgatttgtagacca 184477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 184891 - 184810
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 337  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||| |||| |||| ||| || |||||    
T  184891 tcatttaatatggtcaacatttggttgacctttaactttgcaggaatcgaag-gctttctcatttaaatttgaggatttcgac 184810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 68; Significance: 6e-30; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 18027 - 18170
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||  | |||||||||||||| | || |  || ||||||    
T  18027 gataaatctcgaaagaatattgggaaaaaatatttgatatgaatctccatctatcattaactgtattaagtcaacttatttataacctagtaggctgatt 18126  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  18127 atcaattgatggattagttttcccaatattagggggagataata 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 28195 - 28338
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||  | |||||||||||||| | || |  || ||||||    
T  28195 gataaatctcgaaagaatattgggaaaaaatatttgatatgaatctccatctatcattaactgtattaagtcaacttatttataacctagtaggctgatt 28294  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  28295 atcaattgatggattagttttcccaatattagggggagataata 28338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 38360 - 38503
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 185  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||  | |||||||||||||| | || |  || ||||||    
T  38360 gataaatctcgaaagaatattgggaaaaaatatttgatatgaatctccatctatcattaactgtattaagtcaacttatttataacctagtaggctgatt 38459  T
Q  186 atcaattgatggattcgtttttcaaatattagaaggagataata 229  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  38460 atcaattgatggattagttttcccaatattagggggagataata 38503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 232 - 340
Target Start/End: Original strand, 76667 - 76777
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgacctttt--actttgcaggaatcgaagagctttcttatttcaattggaga 329  Q
    |||||||||||||||||||||  ||||||||||||||| | |||||| |||||||||  |||||||||||||||||| ||||||| ||| |||||| |||    
T  76667 gttagcctgtaaatttaacaggctcatttaatatggtcaaaatttgtatgaccttttttactttgcaggaatcgaagtgctttctcattgcaattgaaga 76766  T
Q  330 atctcgacgaa 340  Q
    |||||||||||    
T  76767 atctcgacgaa 76777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 784
Target Start/End: Original strand, 77004 - 77112
Alignment:
Q  675 ttttattttaattcattgcattctacc-ttttccatgagtttacgtgcgtaaaattacttttatcttgctttattttaagctttttacttgcaaactcaa 773  Q
    |||||||||||| ||||||||| |||| |||||  ||||||||||||| |||| |||||||||| ||||||| | || ||  ||||| |||||| |||||    
T  77004 ttttattttaatgcattgcattttacctttttctttgagtttacgtgcttaaacttacttttat-ttgctttgtctttag-attttaattgcaacctcaa 77101  T
Q  774 acttgtcgaga 784  Q
    || ||||||||    
T  77102 acctgtcgaga 77112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 568 - 669
Target Start/End: Original strand, 37148 - 37248
Alignment:
Q  568 gaaaagtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgtaga 667  Q
    ||||| |||||||| |||||| || |||||||||||||||||||||||||  |||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  37148 gaaaaatgggtcgctaatcatttatagaattctacaacactcaaactacctacgtctagggaaacgagtta-acataatgtatgtaaactgatttgtaga 37246  T
Q  668 cc 669  Q
    ||    
T  37247 cc 37248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 36807 - 36884
Alignment:
Q  239 tgtaaatttaacagaatcatttaatatggtcgacatttgtttg-accttttac-tttgcaggaatcgaagagctttctt 315  Q
    |||||||| |||||  ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  36807 tgtaaattcaacaggctcatttaatatggtcaacatttgtttgtaccttttacttttgcaggaatcgaa-agctttctt 36884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 487 - 620
Target Start/End: Original strand, 14603 - 14736
Alignment:
Q  487 tgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctagttatttagtataaatagtagtttccaagccgaaaagtgggtcgcaaatc 586  Q
    ||||||||||||| ||||||||||||||| | ||||||  ||  ||  ||| | |||||||||||||   |||||||||||| ||| | |||||||||||    
T  14603 tgtccaagatggacgaagtgttgatcatgaggttagtggttcgttagttagatttttagtataaataagtgtttccaagccggaaaattggtcgcaaatc 14702  T
Q  587 atataaagaattctacaacactcaaactaccggc 620  Q
    || || ||||||||||||| ||||||||||||||    
T  14703 atttatagaattctacaaccctcaaactaccggc 14736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 474 - 630
Target Start/End: Complemental strand, 38506 - 38349
Alignment:
Q  474 tgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtgactctctatctag-ttatttagtataaatagtagtttccaagccgaaaa 572  Q
    |||| |||||||||  | |||||| |||||||| | |||||||| |||||| ||| | |  ||| || |||||||||||||   |||||||| | | |||    
T  38506 tggggcaaatagtttcctaagatgcaggaagtgctaatcatgggattagtggctcgccagttaggttttttagtataaataagtgtttccaatcaggaaa 38407  T
Q  573 gtgggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaa 630  Q
     ||||||||||||||| || |||||||||||||||||||||||||| |||||||||||    
T  38406 atgggtcgcaaatcatttatagaattctacaacactcaaactaccgacgtctagggaa 38349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 38735 - 38672
Alignment:
Q  239 tgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatc 302  Q
    |||||||| || ||| ||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  38735 tgtaaattcaatagactcatttaatatggtcaacatttgtttgacctcttactttgctggaatc 38672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 61982 - 61901
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttc 313  Q
    |||||| ||||| ||| ||||  |||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  61982 gttagcgtgtaagtttcacaggctcatttaatatggtcgacatatgtttgacctttaacattgcaggaatcgaagagctttc 61901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 18013 - 18092
Alignment:
Q  233 ttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagcttt 312  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||| |||||| |||| | || ||||||||||||||    
T  18013 ttagcctgtaaatttgatagactcatttaatatggtcgacatttgtttaacctttaacttcggagaaatcgaagagcttt 18092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 545 - 668
Target Start/End: Complemental strand, 29441 - 29317
Alignment:
Q  545 gtataaatagtagtttccaagccgaaaagtgggtcgcaaatcatataaagaa-ttctacaacactcaaactaccggcgtctagggaaatgagttatacag 643  Q
    |||||||||  ||||||| || || ||| ||||||||||||||| || |||| |||||||||| | ||||||||| ||  |||| ||| ||||||||||     
T  29441 gtataaataagagtttcctagtcggaaaatgggtcgcaaatcatttatagaaattctacaacattaaaactaccgacgcataggaaaacgagttatacat 29342  T
Q  644 aatgtatgtaaactgatttgtagac 668  Q
    |||||||||||||| ||| ||||||    
T  29341 aatgtatgtaaacttattcgtagac 29317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 515
Target Start/End: Complemental strand, 29503 - 29473
Alignment:
Q  485 gttgtccaagatggaggaagtgttgatcatg 515  Q
    |||||||||||||||||||||||||||||||    
T  29503 gttgtccaagatggaggaagtgttgatcatg 29473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 29753 - 29679
Alignment:
Q  232 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 306  Q
    |||||||||||| ||  ||||  ||||||||| ||||| ||||||  ||||| ||| ||||||||||||||||||    
T  29753 gttagcctgtaatttcgacagggtcatttaatgtggtcaacatttagttgacttttaactttgcaggaatcgaag 29679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 19956 - 20019
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    ||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||    
T  19956 cagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccact 20019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 16817 - 16871
Alignment:
Q  86 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatc 140  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||    
T  16817 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatc 16871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 38; Significance: 0.000000000005; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 595 - 664
Target Start/End: Complemental strand, 18361 - 18292
Alignment:
Q  595 aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    |||| |||| |||||||||||||||||  |||||||| |||||| ||||||||| |||||| ||||||||    
T  18361 aattatacatcactcaaactaccggcgcatagggaaacgagttagacagaatgtttgtaaattgatttgt 18292  T

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Target: scaffold0210; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 595 - 664
Target Start/End: Complemental strand, 26253 - 26184
Alignment:
Q  595 aattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaactgatttgt 664  Q
    |||| |||| |||||||||||||||||  |||||||| |||||| ||||||||| |||||| ||||||||    
T  26253 aattatacatcactcaaactaccggcgcatagggaaacgagttagacagaatgtttgtaaattgatttgt 26184  T

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Target: scaffold0210; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 522
Target Start/End: Complemental strand, 18481 - 18434
Alignment:
Q  475 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 522  Q
    |||||||  ||||||||||||||||||||||| |||||||||| ||||    
T  18481 gggacaagcagttgtccaagatggaggaagtgctgatcatgggattag 18434  T

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Target: scaffold0210; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 522
Target Start/End: Complemental strand, 26373 - 26326
Alignment:
Q  475 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 522  Q
    |||||||  ||||||||||||||||||||||| |||||||||| ||||    
T  26373 gggacaagcagttgtccaagatggaggaagtgctgatcatgggattag 26326  T

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Target: scaffold0258 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 15319 - 15379
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||||||||||||||||||||| || || ||||| ||||||||| || |||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 15379  T

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Target: scaffold1587 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1587
Description:

Target: scaffold1587; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 1394 - 1441
Alignment:
Q  255 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatc 302  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  1394 tcattgaatatggtcaacatttgtttgaccttttactttgtaggaatc 1441  T

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Target: scaffold1156 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 853 - 918
Alignment:
Q  258 tttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 324  Q
    |||||||||||| |||||||  |||||||| |||||||| ||||||||| ||||||| |||||||||    
T  853 tttaatatggtcaacatttggatgacctttaactttgcaagaatcgaag-gctttctcatttcaatt 918  T

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Target: scaffold0299 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 11610 - 11548
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||||||||||||||||||||||| || || ||||| ||||||||  || |||||||||||||    
T  11610 cagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccac 11548  T

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Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 2468 - 2526
Alignment:
Q  20 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||| || ||||| ||||||||  ||||| ||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccac 2526  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 109988 - 110061
Alignment:
Q  99 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 172  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  109988 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 110061  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 13042 - 13102
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    ||||||||||||||||||||||||| || ||||| ||||||||  |  |||||||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccac 13102  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 10121 - 10246
Alignment:
Q  96 gaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgat 195  Q
    ||||||||||||||||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| ||||         || ||||||||||||||||    
T  10121 gaaagaatattgggaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgttta--------caggctgattatcaattgat 10212  T
Q  196 ggattcgtttttcaaatattagaaggagataata 229  Q
    | ||| ||||| | ||||||||  ||||||||||    
T  10213 gaattagttttcccaatattagggggagataata 10246  T

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Target: scaffold0070 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 38898 - 38958
Alignment:
Q  18 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 78  Q
    |||| |||||||| ||||| ||| |||||||||||||||| ||| || |||||||||||||    
T  38898 gagaaaatcgaacgtgagatcttaaagatgagcatactcctaggtcccaagccaataccac 38958  T

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Target: scaffold0431 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 656
Target Start/End: Original strand, 5079 - 5156
Alignment:
Q  575 gggtcgcaaatcatataaagaattctacaacactcaaactaccggcgtctagggaaatgagttatacagaatgtatgtaaac 656  Q
    |||||||||||||||||  ||||||||  |||||| || || |||||||||| |||| |||| ||||| |||||||||||||    
T  5079 gggtcgcaaatcatata--gaattcta--acactcgaagtatcggcgtctagagaaaagagtcatacaaaatgtatgtaaac 5156  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 94965 - 95028
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 79  Q
    |||||| ||| |||||||||||||||| || ||||| |||||||||  | ||||||||||||||    
T  94965 cagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccact 95028  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 2705 - 2746
Alignment:
Q  16 cagagagaatcgaacctgagaccttgaagatgagcatactcc 57  Q
    ||||||||||||||||||||||||||| || ||||| |||||    
T  2705 cagagagaatcgaacctgagaccttgaggaggagcagactcc 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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