View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20262_low_71 (Length: 364)
Name: NF20262_low_71
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20262_low_71 |
 |  |
|
| [»] scaffold1353 (2 HSPs) |
 |  |  |
|
| [»] scaffold1352 (2 HSPs) |
 |  |  |
|
| [»] scaffold0881 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold1353 (Bit Score: 241; Significance: 1e-133; HSPs: 2)
Name: scaffold1353
Description:
Target: scaffold1353; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 26 - 346
Target Start/End: Original strand, 664 - 984
Alignment:
| Q |
26 |
atcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagttagaacttcatcatctttggatgaaga |
125 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
664 |
atcaataataatgatgatgaagctagcgttgttgataatgaaaaaaggaatatgattcaaacaaatgaggagttagaacttcatcctctttggaagaaga |
763 |
T |
 |
| Q |
126 |
aatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagttttttgaagatggaactgattctacg |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
764 |
aatcctagaatttgcatcacatttcctactctttccacatgatgcactacaaattgggttaggtgcctcaaagttttttgaagatggaactgattctaag |
863 |
T |
 |
| Q |
226 |
gtcgaactcaaaattcgtgaagttgttgaagaaaatttattagatgaattttacttccaataaattaatccaataaattttcttcaatgccttcaccaat |
325 |
Q |
| |
|
|| ||||| |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| |
|
|
| T |
864 |
gtggaactaaaaattggtgaagctgatgaagaaaatttattagatgaattttacttccaataaattaatccaataaattttctttgataccttcaacaat |
963 |
T |
 |
| Q |
326 |
attgagttcgagcctagaatc |
346 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
964 |
attgagttcgagccgagaatc |
984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1353; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 276
Target Start/End: Complemental strand, 1192 - 925
Alignment:
| Q |
10 |
tatcaataatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagttagaa-cttca |
108 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| | |||| |||||| |||||||||||||||| |||||||| ||||| |
|
|
| T |
1192 |
tatcaataaagtttcaatcaataataatgatgatgaagctagcgttgttgataaggaaaaagggaatatgattcaaacaaatgagcagttagaatcttca |
1093 |
T |
 |
| Q |
109 |
tcatctttggatgaagaaatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagttttttgaag |
208 |
Q |
| |
|
| |||||| | | ||| |||||| ||||| |||||||||||||| |||| || ||||||||||| || ||||| ||||||| ||||||||||||||| |
|
|
| T |
1092 |
ttctctttgaaaggggaagtcctagcatttgaatcacatttcctaccctttgcatatgatgcactacaatttggggaaggtgccacaaagttttttgaag |
993 |
T |
 |
| Q |
209 |
atggaactgattctacggtcgaactcaaaattcgtgaagttgttgaagaaaatttattagatgaattt |
276 |
Q |
| |
|
|||||||||||||| | |||||||||| ||| ||||| | | ||||||||||||| ||| ||||| |
|
|
| T |
992 |
atggaactgattctcggctcgaactcaatattgttgaaggtatcaaagaaaatttattggattaattt |
925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1352 (Bit Score: 241; Significance: 1e-133; HSPs: 2)
Name: scaffold1352
Description:
Target: scaffold1352; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 26 - 346
Target Start/End: Complemental strand, 1326 - 1006
Alignment:
| Q |
26 |
atcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagttagaacttcatcatctttggatgaaga |
125 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
1326 |
atcaataataatgatgatgaagctagcgttgttgataatgaaaaaaggaatatgattcaaacaaatgaggagttagaacttcatcctctttggaagaaga |
1227 |
T |
 |
| Q |
126 |
aatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagttttttgaagatggaactgattctacg |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
1226 |
aatcctagaatttgcatcacatttcctactctttccacatgatgcactacaaattgggttaggtgcctcaaagttttttgaagatggaactgattctaag |
1127 |
T |
 |
| Q |
226 |
gtcgaactcaaaattcgtgaagttgttgaagaaaatttattagatgaattttacttccaataaattaatccaataaattttcttcaatgccttcaccaat |
325 |
Q |
| |
|
|| ||||| |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| |
|
|
| T |
1126 |
gtggaactaaaaattggtgaagctgatgaagaaaatttattagatgaattttacttccaataaattaatccaataaattttctttgataccttcaacaat |
1027 |
T |
 |
| Q |
326 |
attgagttcgagcctagaatc |
346 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
1026 |
attgagttcgagccgagaatc |
1006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1352; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 276
Target Start/End: Original strand, 798 - 1065
Alignment:
| Q |
10 |
tatcaataatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagttagaa-cttca |
108 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| | |||| |||||| |||||||||||||||| |||||||| ||||| |
|
|
| T |
798 |
tatcaataaagtttcaatcaataataatgatgatgaagctagcgttgttgataaggaaaaagggaatatgattcaaacaaatgagcagttagaatcttca |
897 |
T |
 |
| Q |
109 |
tcatctttggatgaagaaatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagttttttgaag |
208 |
Q |
| |
|
| |||||| | | ||| |||||| ||||| |||||||||||||| |||| || ||||||||||| || ||||| ||||||| ||||||||||||||| |
|
|
| T |
898 |
ttctctttgaaaggggaagtcctagcatttgaatcacatttcctaccctttgcatatgatgcactacaatttggggaaggtgccacaaagttttttgaag |
997 |
T |
 |
| Q |
209 |
atggaactgattctacggtcgaactcaaaattcgtgaagttgttgaagaaaatttattagatgaattt |
276 |
Q |
| |
|
|||||||||||||| | |||||||||| ||| ||||| | | ||||||||||||| ||| ||||| |
|
|
| T |
998 |
atggaactgattctcggctcgaactcaatattgttgaaggtatcaaagaaaatttattggattaattt |
1065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 10027012 - 10026665
Alignment:
| Q |
1 |
aatggagagtatcaataatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagtta |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||| |||||| ||||||| |||||||||| || |
|
|
| T |
10027012 |
aatggagggtatcaataatgtttcaatcaataataatgatgatgaagctagcattgttgataaaggaaaagggaatatgattcaatcaaatgaggaattg |
10026913 |
T |
 |
| Q |
101 |
gaa-cttcatcatctttggatgaagaaatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagt |
199 |
Q |
| |
|
||| ||||||| |||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
10026912 |
gaatcttcatcctctttggaagaagaagtcctagaatctgcatcacatttcatactctttccacatgatgcactacaatttggggaaggtgcctcaaagt |
10026813 |
T |
 |
| Q |
200 |
tttttgaagatggaactgattctacggtcgaactcaaaattcgtgaagttgt--tgaagaaaatttattagatgaattttacttccaataaattaatcca |
297 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||| |||||| | | | || ||| ||||||||||||||||||||||||||||||| || | |
|
|
| T |
10026812 |
tttttgaagatggaactgattctagactcgaactcaatattggtgaaggtatcctaaataaattttattagatgaattttacttccaataaattcattaa |
10026713 |
T |
 |
| Q |
298 |
ataaattttcttcaatgccttcaccaatattgagttcgagcctagaat |
345 |
Q |
| |
|
||||||||||||| || |||||| |||||||||||||| |||||||| |
|
|
| T |
10026712 |
ataaattttcttcgataccttcatcaatattgagttcggccctagaat |
10026665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 33 - 280
Target Start/End: Original strand, 8730482 - 8730730
Alignment:
| Q |
33 |
atgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagttagaa-cttcatcatctttggatgaagaaatcct |
131 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
8730482 |
atgatgatgatgaagctagcgttgctgataaaggaaaagggaatatgattcaaacaaatgaggagttagaaacttcatcctctttggaagaagaaatcct |
8730581 |
T |
 |
| Q |
132 |
agaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagttttttgaagatggaactgattctacggtcgaa |
231 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||| |||||| | ||||| |
|
|
| T |
8730582 |
agaagttgcatcacatttcctactctttccacatgatgcactacaatttggggaaggtgcctcaaagttttatgaagatggaactaattctaggctcgaa |
8730681 |
T |
 |
| Q |
232 |
ctcaaaattcgtgaagttgttgaagaaaatttattagatgaattttact |
280 |
Q |
| |
|
||||| ||| |||||| | | || ||||||||||| ||||||||||||| |
|
|
| T |
8730682 |
ctcaatattggtgaaggtatcgatgaaaatttattggatgaattttact |
8730730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 20523867 - 20523688
Alignment:
| Q |
1 |
aatggagagtatcaataatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagtta |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
20523867 |
aatggagggtatcaataatgtttcaatcaataataatgatgatgaagctagcgttgttgataatggaaaatggaatacgattcaaacaaatgagaagtta |
20523768 |
T |
 |
| Q |
101 |
gaacttcatcatctttggatgaagaaatcctagaatttgcatcacatttcctactctttccacatgatgcactataaatt |
180 |
Q |
| |
|
|||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
20523767 |
gaacttcatcctctttggaagaagaaatcttagaatttgcatcacatttcctactctttccacatgatgcactacaaatt |
20523688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 8710352 - 8710635
Alignment:
| Q |
1 |
aatggagagtatcaataatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagtta |
100 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| |||||||||||| |||||||||| |||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
8710352 |
aatggagggtatcaatgatgtttcaatcaataataatgatgatgaagctagcgttgtttataaagaaaaagggaatatgattcaaacaaatgaggagtta |
8710451 |
T |
 |
| Q |
101 |
gaa-cttcatcatctttggatgaagaaatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagt |
199 |
Q |
| |
|
||| |||||| ||| ||| |||||| |||||| |||||||||||||||||||| ||||||| ||||| ||||| || ||||| |||||||||||||| |
|
|
| T |
8710452 |
gaattttcatcctctggggaagaagaagtcctagcatttgcatcacatttcctaccctttccatatgattcactacaatttgggaaaggtgcctcaaagt |
8710551 |
T |
 |
| Q |
200 |
tttttgaagatggaactgattctacggtcgaactcaaaattcgtgaagttgttgaagaaaatttattagatgaattttacttcc |
283 |
Q |
| |
|
| ||| || |||||||||||||| | |||||||||| ||| ||||| |||||||||||||||| || | ||||||||||| |
|
|
| T |
8710552 |
tatttacaggtggaactgattctaggctcgaactcaatattgatgaaggcattgaagaaaatttattggacggattttacttcc |
8710635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 10026449 - 10026723
Alignment:
| Q |
1 |
aatggagagtatcaataatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagtta |
100 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||| ||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||| ||||| |
|
|
| T |
10026449 |
aatggagggtatcaatagtgtttcaatcaataataatgataatgaagctagcgttgttgataaaggaaaagggaatatgattcaaacaaatgagtagtta |
10026548 |
T |
 |
| Q |
101 |
gaa-cttcatcatctttggatgaagaaatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagt |
199 |
Q |
| |
|
||| ||||||| ||| || | ||| || |||||| |||||||||||||||||| | |||||| || |||||||| || |||| |||||||||||||| |
|
|
| T |
10026549 |
gaatcttcatcctctatgaaagaaaaagtcctagcatttgcatcacatttcctgccatttccatatcatgcactacaatttgg--aaggtgcctcaaagt |
10026646 |
T |
 |
| Q |
200 |
tttttgaagatggaactgattctacggtcgaactcaaaattcgtgaagttgttgaagaaaatttattagatgaattt |
276 |
Q |
| |
|
||||||||||||||| | |||||| || ||||||||| ||| ||||| | | |||||||||||||| |||||||| |
|
|
| T |
10026647 |
tttttgaagatggaattaattctagggccgaactcaatattgatgaaggtatcgaagaaaatttatttaatgaattt |
10026723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 8710621 - 8710569
Alignment:
| Q |
294 |
tccaataaattttcttcaatgccttcaccaatattgagttcgagcctagaatc |
346 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8710621 |
tccaataaattttcttcaatgccttcatcaatattgagttcgagcctagaatc |
8710569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 8730726 - 8730668
Alignment:
| Q |
287 |
aaattaatccaataaattttcttcaatgccttcaccaatattgagttcgagcctagaat |
345 |
Q |
| |
|
||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||| |
|
|
| T |
8730726 |
aaattcatccaataaattttcatcgataccttcaccaatattgagttcgagcctagaat |
8730668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 20523624 - 20523690
Alignment:
| Q |
10 |
tatcaataatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaat |
76 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| | |||| ||||| |
|
|
| T |
20523624 |
tatcaataaagtttcaatcaataataatgatgatgaagctagcgttgttgataaggaaaaagggaat |
20523690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 141; Significance: 7e-74; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 9 - 283
Target Start/End: Complemental strand, 3579910 - 3579637
Alignment:
| Q |
9 |
gtatcaataatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagttagaa-cttc |
107 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
3579910 |
gtatcaataatgtttaaatcaataataatgatgatgaagctagcgttgttgataaagaaaaagggaatatgattcaaacaaatgaggagttagaatcttc |
3579811 |
T |
 |
| Q |
108 |
atcatctttggatgaagaaatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagttttttgaa |
207 |
Q |
| |
|
||| | |||||| || ||| || |||| ||||||||||||||||||| |||| || |||||||||||||| ||||| ||||||||| || |||||||| |
|
|
| T |
3579810 |
atcctatttggaagatgaagtcatagattttgcatcacatttcctacccttttcatatgatgcactataatttgggaaaggtgcctc--agatttttgaa |
3579713 |
T |
 |
| Q |
208 |
gatggaactgattctacggtcgaactcaaaattcgtgaagttgttgaagaaaatttattagatgaattttacttcc |
283 |
Q |
| |
|
|||||||||||||||| | |||||||||| ||| |||||| | | |||||||||||||| ||| |||||||||||| |
|
|
| T |
3579712 |
gatggaactgattctaggctcgaactcaatattggtgaaggtatggaagaaaatttattggatcaattttacttcc |
3579637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 3579205 - 3579472
Alignment:
| Q |
17 |
aatgtttcaatcaataatgatgatgatgaagttagcgttgttgataaaggaaaatggaatacgattcaaacaaatgaggagttagaa-cttcatcatctt |
115 |
Q |
| |
|
|||||||||||||||||| |||||| |||| |||||||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
3579205 |
aatgtttcaatcaataatagtgatgacgaagctagcgttgttgataaaggaaaaggaaatatgattcaaacaaatgaggagttagaatcttcatcctatt |
3579304 |
T |
 |
| Q |
116 |
tggatgaagaaatcctagaatttgcatcacatttcctactctttccacatgatgcactataaattgggttaggtgcctcaaagttttttgaagatggaac |
215 |
Q |
| |
|
|||| ||| || || |||||||| ||| ||| |||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
3579305 |
tggaagaaaaagtcttagaattttcattacagttcctactctttccacatgatgtactacaatttggggaaggtgcctcaaagttttttgaagatagaac |
3579404 |
T |
 |
| Q |
216 |
tgattctacggtcgaactcaaaattcgtgaagttgttgaagaaaatttattagatgaattttacttcc |
283 |
Q |
| |
|
| |||||| | |||||||||| ||| |||||| | | ||||||||||||||||||| ||||||||||| |
|
|
| T |
3579405 |
tcattctaggctcgaactcaatattggtgaaggtatcgaagaaaatttattagatggattttacttcc |
3579472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 3579644 - 3579703
Alignment:
| Q |
287 |
aaattaatccaataaattttcttcaatgccttcaccaatattgagttcgagcctagaatc |
346 |
Q |
| |
|
||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
3579644 |
aaattgatccaataaattttcttccataccttcaccaatattgagttcgagcctagaatc |
3579703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 3579455 - 3579407
Alignment:
| Q |
297 |
aataaattttcttcaatgccttcaccaatattgagttcgagcctagaat |
345 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
3579455 |
aataaattttcttcgataccttcaccaatattgagttcgagcctagaat |
3579407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0881 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0881
Description:
Target: scaffold0881; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 220
Target Start/End: Complemental strand, 3723 - 3565
Alignment:
| Q |
60 |
ataaaggaaaatggaatacgattcaaacaaatgaggagttagaa-cttcatcatctttggatgaagaaatcctagaatttgcatcacatttcctactctt |
158 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| ||||| ||||||| |||| ||| |||||| ||||| |||||||||||||| |||||| |
|
|
| T |
3723 |
ataaaggaaaagggaatttgattcaaacaaatgaa---ttagattcttcatcctcttcggaagaagaagacctagcatttgcatcacattctaaactctt |
3627 |
T |
 |
| Q |
159 |
tccacatgatgcactataaattgggttaggtgcctcaaagttttttgaagatggaactgatt |
220 |
Q |
| |
|
|||| ||||| ||||| | ||||| ||||||||||||||||||| |||||||||| |||| |
|
|
| T |
3626 |
tccatatgatacactacgatttggggaaggtgcctcaaagttttttcaagatggaaccgatt |
3565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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