View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20262_low_93 (Length: 304)
Name: NF20262_low_93
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20262_low_93 |
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Alignment Details
Target: chr3 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 51810422 - 51810136
Alignment:
| Q |
1 |
ttgtaggtgttaagtttggaaacaaataagttgcttacttaaactttcacttgttttgtgatgaaacaaaagagaaaacctttatctgaagttaaccata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51810422 |
ttgtaggtgttaagtttggaaacaaataagttgctttcttaaactttcacttgttttgtgatgaaacaaaagagaaaacctttatctgaagttaaccata |
51810323 |
T |
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| Q |
101 |
atggtcccaaagaatgatttggtggctaagttcatctttatccttacagcatagatatcatatcagcaatccttttatgctcttattctcttttataaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
51810322 |
atggtcccaaagaatgatttggtggctaagttcatctttatccttacagcatagatatcatatcagcaatccttttatgttcttattctcttttataaaa |
51810223 |
T |
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| Q |
201 |
cacattatgatataatgcatttcctttacaaacaaaacaaacaaggatgcaccagttatgacatgtacacgtcaagaatgagcatgc |
287 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51810222 |
cacattatgatataatgcatttgctttacaaacaaaacaaacaaggatgcaccagttatgacatgtacacgtcaagaatgagcatgc |
51810136 |
T |
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