View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20262_low_94 (Length: 301)
Name: NF20262_low_94
Description: NF20262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20262_low_94 |
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Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 286
Target Start/End: Original strand, 6697848 - 6698120
Alignment:
| Q |
14 |
cataggacttgggtggggtctgtcccaaacttggtaaacttgtctttattgaatgactctgttcctgttttcattacctttacttcaatcgtgcataaac |
113 |
Q |
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| T |
6697848 |
cataggacttgggtggggtctgtcccaaacttggtaaacttgtctttattgaatgactctgttcctgttttcattacctttacttcaatcgtgcataaac |
6697947 |
T |
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| Q |
114 |
atttaaacacccatttgtcaccccaaaacagttaaggataccccaaacacaccattggatttgaaaatcattgtgcaagcttttgattgtaaccaactcc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6697948 |
atttaaacacccatttgtcaccccaaaacagttaaggataccccaaacacaccattggatttgaaaatcattgtgcaagcttttgattgtaaccaactcc |
6698047 |
T |
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| Q |
214 |
atgcnnnnnnnttaatttgttgatttccacaccctccggtgtgtaatcattagttaacaagaaaaattctcaa |
286 |
Q |
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|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
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| T |
6698048 |
atgcaaaaaaattaatttgttgatttccacaccctccagtgtgtaatcattagttaacaagaaaaattatcaa |
6698120 |
T |
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