View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20263_high_1 (Length: 413)
Name: NF20263_high_1
Description: NF20263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20263_high_1 |
 | |
|
| [»] scaffold0570 (1 HSPs) |
| | |
|
| [»] scaffold0479 (1 HSPs) |
| | |
|
| [»] scaffold1476 (1 HSPs) |
| | |
|
| [»] scaffold0233 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 354; Significance: 0; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Complemental strand, 48537215 - 48536826
Alignment:
| Q |
1 |
ggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
48537215 |
ggtaattttgtcgcaggccgaacaacctttctcccccctttacttgatatagagatgggtgaagccataggtctgttgtaggcaatgcagtgggcgaaag |
48537116 |
T |
|
| Q |
101 |
agcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcca |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48537115 |
agcttaatttggtaagcacagacttcgaatcagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcca |
48537016 |
T |
|
| Q |
201 |
tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
48537015 |
tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaagagacaagccaatagtgtagcccatagcttagatagggaagca |
48536916 |
T |
|
| Q |
301 |
ttatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttttct |
390 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48536915 |
ttatcacatgctagtttccaattgcatcttaatatcccttattgtataacttctttgattaataatgaaaagctataagcttccttttct |
48536826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 383
Target Start/End: Complemental strand, 51899768 - 51899386
Alignment:
| Q |
1 |
ggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaag |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||| ||| | ||| | || |||||||| |||||||||| |
|
|
| T |
51899768 |
ggtaattttgtcgcaggtcgaacagcctttctatcccctttactcgatgtagagatgggtgaagcaatatggctgctacaagcaatgcaatgggcgaaag |
51899669 |
T |
|
| Q |
101 |
agcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcca |
200 |
Q |
| |
|
|||| || |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| || || || |
|
|
| T |
51899668 |
agctgaacatggtgagtatggacttcgaaacagactcaaagattgtggcagatagcatttataaaggagatggtgtctctgattttatggcaataattca |
51899569 |
T |
|
| Q |
201 |
tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagca |
300 |
Q |
| |
|
||||||||| || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |
|
|
| T |
51899568 |
tgattgtagacacttgttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccataatttagctagggaagca |
51899469 |
T |
|
| Q |
301 |
ttatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
51899468 |
ctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttc |
51899386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 4 - 390
Target Start/End: Complemental strand, 16933253 - 16932867
Alignment:
| Q |
4 |
aattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaagagc |
103 |
Q |
| |
|
||||||||||||| | ||||| ||| | ||||||||||||| || || |||||||||||||| ||| | || ||| | |||||||||||||| ||||||| |
|
|
| T |
16933253 |
aattttgtcgcagccagaacagcctctatctcccctttacttgacattgagatgggtgaagctataaggcttttgtaagcaatgcagtgggcaaaagagc |
16933154 |
T |
|
| Q |
104 |
ttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatga |
203 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||| |||| |||||| |||||||||||| ||||||||||| |||||||||| || |||||||| |
|
|
| T |
16933153 |
ttaacatggtaagcatggacttcgaaacagactcaaagactgtgacagataaaatttataaaggaaatggtgtctctgattttatggcaattatccatga |
16933054 |
T |
|
| Q |
204 |
ttgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcatta |
303 |
Q |
| |
|
|||||| || ||| | |||| ||| ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||||||| |
|
|
| T |
16933053 |
ttgtagacacttgctgatgaccgatttaacaaactctgatgtgagtttaattaggagacaagccaatggtgttgcccatagtttagctagggaagcatta |
16932954 |
T |
|
| Q |
304 |
tcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttttct |
390 |
Q |
| |
|
|||||||||||||||||| | || ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16932953 |
tcacatgctagtttccaactatattttaatattccacattgtataactactttgattaataatgaaaagctataagcttccttttct |
16932867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 170 - 390
Target Start/End: Complemental strand, 12723580 - 12723360
Alignment:
| Q |
170 |
atggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaa |
269 |
Q |
| |
|
||||||||| | |||||||||| || |||||||||||||| || ||||| |||| ||| ||| |||||||||||||||||| ||||||||| || ||| |
|
|
| T |
12723580 |
atggtgtctatgattttatggcaattatccatgattgtagacacttgttgatgaccgatttaataaactctgatgtgagtttaattaggagataaatcaa |
12723481 |
T |
|
| Q |
270 |
tagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaa |
369 |
Q |
| |
|
| |||| |||||||| |||||||||||||||||||||||||||| ||||||||| || ||||||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
12723480 |
tggtgttgcccatagtttagctagggaagcattatcacatgctaatttccaattatattttaatattccatattgtataactactttgattaataatgaa |
12723381 |
T |
|
| Q |
370 |
aagctataagcttccttttct |
390 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
12723380 |
aagctataaacttccttttct |
12723360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 383
Target Start/End: Complemental strand, 30468931 - 30468639
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| || ||||||||||| || | |||| ||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
30468931 |
tgggcgaaagacctaaatttagtaaatatggattttgaaacagactcaaaagtggtggtagagaatatctataagggggatggtgtctcagatttcatgg |
30468832 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
30468831 |
ccataatacacgattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagc |
30468732 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
30468731 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc |
30468639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 143 - 388
Target Start/End: Original strand, 25737448 - 25737696
Alignment:
| Q |
143 |
ttgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattgtagg---catttgttaatgatcgacttagcaaactc |
239 |
Q |
| |
|
||||||||||||| || || ||||| |||||||||||||||| |||||| || || || |||||||| || ||||| ||||| | ||||| ||||| |
|
|
| T |
25737448 |
ttgtggcagatagtatctacaaaggggatggtgtctctaattatatggctataattcacgattgtagtagacaattgttgatgattaatttagcgaactc |
25737547 |
T |
|
| Q |
240 |
tgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccct |
339 |
Q |
| |
|
|||||| | ||||||||||||||| || ||| ||| ||||||||| |||||||| |||||||| ||||||| ||||||||| |||||||| || || |
|
|
| T |
25737548 |
tgatgtaaagtttattaggagacaaacctataatgttgcccatagcctagctaggaaagcattacatcatgctaatttccaatttcatcttaacattcca |
25737647 |
T |
|
| Q |
340 |
cattgtataacttctttgattaataatgaaaagctataagcttcctttt |
388 |
Q |
| |
|
|||||||| | ||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
25737648 |
cattgtattcatgctttgattaataatgaaaaactataagcttcttttt |
25737696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 118 - 383
Target Start/End: Original strand, 31637495 - 31637760
Alignment:
| Q |
118 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
215 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||||||| ||| |||||| ||||||||| |||| ||||| || ||| |||||||||| || || |
|
|
| T |
31637495 |
atggacttcgaaacagactcaaaagttgtggctgatagcatatatggcaaggag--ggtgtctctgatttcatggcaataatcaatgattgtagacactt |
31637592 |
T |
|
| Q |
216 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
315 |
Q |
| |
|
||| | | ||| |||| ||||||||||||| || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
31637593 |
gttgagtaccgatttagtgaactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
31637692 |
T |
|
| Q |
316 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||| | |||||||| || || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
31637693 |
ctccacattcatcttaacattccacattgtatttcttctttgatcaataatgaaaagctataagcttc |
31637760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 383
Target Start/End: Complemental strand, 6999653 - 6999442
Alignment:
| Q |
172 |
ggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaata |
271 |
Q |
| |
|
||||||||| |||| ||||| || ||| |||||||||| || ||||| | | | | |||| ||||||||||||| || ||||||||||||| |||| |
|
|
| T |
6999653 |
ggtgtctctgatttcatggcaataatcaatgattgtagacacttgttgagtaccaatttagtgaactctgatgtgaagttcattaggagacaagtcaatg |
6999554 |
T |
|
| Q |
272 |
gtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaa |
371 |
Q |
| |
|
|||| || ||||| ||||||| ||||||| || || |||||| |||| | | |||||| || || |||||||| |||||||||| ||||||||||| |
|
|
| T |
6999553 |
gtgtggctcatagtttagctaaggaagcactacaccacgctagtctccacattcgtcttaacattccacattgtatttcttctttgatcaataatgaaaa |
6999454 |
T |
|
| Q |
372 |
gctataagcttc |
383 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6999453 |
gctataagcttc |
6999442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 25177952 - 25178010
Alignment:
| Q |
325 |
catcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||||||| || || |||||||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
25177952 |
catcttaacattccacattgtatttctactttgatcaataatgaaaagctataagcttc |
25178010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 243; Significance: 1e-134; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 383
Target Start/End: Original strand, 329980 - 330362
Alignment:
| Q |
1 |
ggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaag |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||| ||||| ||| | || |||||||| |||||||||| |
|
|
| T |
329980 |
ggtaattttgtcgcaggtcgaacagcctttctatcccctttactcgatgtagagatgggtgaagcaatagggctgctacaagcaatgcaatgggcgaaag |
330079 |
T |
|
| Q |
101 |
agcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcca |
200 |
Q |
| |
|
|||| || |||| || |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||| || || || |
|
|
| T |
330080 |
agctgaacatggtgagtatggacttcgaaacagactcaaagattgtggcatatagcatttataaaggagatggtgtctctgattttatggcaataattca |
330179 |
T |
|
| Q |
201 |
tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagca |
300 |
Q |
| |
|
||||||||| || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| |
|
|
| T |
330180 |
tgattgtagacacttgttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagctagggaagca |
330279 |
T |
|
| Q |
301 |
ttatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
330280 |
ctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaaactataagcttc |
330362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 118 - 383
Target Start/End: Complemental strand, 13997425 - 13997160
Alignment:
| Q |
118 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
215 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||| ||| ||| |||||| ||||||||| |||||||||| || ||| |||||||||| || || |
|
|
| T |
13997425 |
atggacttcgaaacagactcaaaagttgtggctgataacatatatggcaaggag--ggtgtctctgattttatggcaataatcaatgattgtagacactt |
13997328 |
T |
|
| Q |
216 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
315 |
Q |
| |
|
||| | | ||| |||| ||||||||||| | || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
13997327 |
gttgagtaccgatttagtgaactctgatgttaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
13997228 |
T |
|
| Q |
316 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||| | |||||||| || || |||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
13997227 |
ctccacattcatcttaacattccacattgtatttattctttgatcaataatgaaaagctataagcttc |
13997160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 6816301 - 6816241
Alignment:
| Q |
327 |
tcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttt |
387 |
Q |
| |
|
|||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6816301 |
tcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttccttt |
6816241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 34701438 - 34701261
Alignment:
| Q |
143 |
ttgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctga |
242 |
Q |
| |
|
||||||||||||| || || ||||| || |||| | | |||||||||| || || | ||||||||| || ||||| | ||| || |||| |||||||| |
|
|
| T |
34701438 |
ttgtggcagatagtatctacaaaggggacagtgtttttgattttatggctataattcgtgattgtagacacttgttgacgattgatttagtgaactctga |
34701339 |
T |
|
| Q |
243 |
tgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaa |
321 |
Q |
| |
|
| ||| || ||||| |||||| ||||||| | |||||||| |||||||||| |||| || ||||||||||||||| |
|
|
| T |
34701338 |
tttgaagttcattagaagacaaaccaatagagccgcccatagtttagctaggg-agcactaaatcatgctagtttccaa |
34701261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 238; Significance: 1e-131; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 48207299 - 48207684
Alignment:
| Q |
1 |
ggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaag |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||| | ||||||||||||||| ||||||| ||||| || ||||| ||| | || ||||||||||||||||||| |
|
|
| T |
48207299 |
ggtaattttgtcgcaggtcgaacagcctttatatcccctttactcgatgtagagataggtgaggcaatagggctgctacaagcaatgcagtgggcgaaag |
48207398 |
T |
|
| Q |
101 |
agcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcca |
200 |
Q |
| |
|
||||||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||| || || || |
|
|
| T |
48207399 |
agcttaacatggtgagcatggatttcgaaacagactcaaagattgtggcagatagcatttataaaggaaatggtgactctgattttatggcaataattca |
48207498 |
T |
|
| Q |
201 |
tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagca |
300 |
Q |
| |
|
||||||||| || || || |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| |
|
|
| T |
48207499 |
tgattgtagacactttttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagctagggaagca |
48207598 |
T |
|
| Q |
301 |
ttatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttcctt |
386 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
48207599 |
ctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttcctt |
48207684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 91 - 383
Target Start/End: Original strand, 5045367 - 5045653
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| |||||||| ||| | || | |||||||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
5045367 |
tgggcgaaagacctaaatttagtaaatatggatttcgaaacggacgcaaaagtggtggcagagaatatctataagggggatggtgtctcagatttcatgg |
5045466 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| || ||||| |||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
5045467 |
ccataatacacgattgtagacatctattaatgactgatttagcgaa------tgtgaagtttattaggagacaagccaatagtgttgcccataatctagc |
5045560 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||||||||||||||||||| |||||||||| |
|
|
| T |
5045561 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttgattaataatgaaaagttataagcttc |
5045653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 7 - 387
Target Start/End: Original strand, 14585636 - 14586016
Alignment:
| Q |
7 |
tttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaagagctta |
106 |
Q |
| |
|
|||||||||| | ||||||||| | ||||||||||||| || | |||||||||||||| ||||| || |||| |||||||||||||| |||||||||| |
|
|
| T |
14585636 |
tttgtcgcagccagaacaacctctatctcccctttacttgacgttgagatgggtgaagctatagggcttctgcaagcaatgcagtgggcaaaagagctta |
14585735 |
T |
|
| Q |
107 |
atttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattg |
206 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| || || |||||||| |
|
|
| T |
14585736 |
acatggtaagcatggacttcgaaacagactctaagattgtgacagatagcatttatgaaggagatggtgtctctgattttatggcaattattcatgattg |
14585835 |
T |
|
| Q |
207 |
taggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatca |
306 |
Q |
| |
|
|| || ||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| |
|
|
| T |
14585836 |
taaacacttgttgatgaccgacttagcaaactctgatgtgaattttattaggagacaagccaatggtgttgcccatagtttagctagggaagcattatca |
14585935 |
T |
|
| Q |
307 |
catgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttt |
387 |
Q |
| |
|
||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14585936 |
catgctagtttccaattatatcttaatattccacattgtataactagtttgattaataatgaaaagctataagcttccttt |
14586016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 33737837 - 33737458
Alignment:
| Q |
1 |
ggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||| | ||||||||||| ||| |||||||||||||||| ||||| ||| | || ||||||||||||||||||| |
|
|
| T |
33737837 |
ggtaattttgtcgcaggtcgaacaacctttttatcccctttacttgatgtagagatgggtgaagcgataggactgctacaagcaatgcagtgggcgaaag |
33737738 |
T |
|
| Q |
101 |
agcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcca |
200 |
Q |
| |
|
||||||| |||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| || || || |
|
|
| T |
33737737 |
agcttaacatggtgagcatggattttgaaacagactcaaagattgtggcagatagtgtttataaaggaaatggtgtctctgattttatggcaataattca |
33737638 |
T |
|
| Q |
201 |
tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagca |
300 |
Q |
| |
|
|||||||| || ||||| |||| ||| |||| |||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
33737637 |
agattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattaggagacaagccaatggtgttgcccatagtttagctagggaagcg |
33737538 |
T |
|
| Q |
301 |
ttatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc |
380 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
33737537 |
ctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc |
33737458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 383
Target Start/End: Complemental strand, 45274535 - 45274243
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| || ||||||||||| || | |||| ||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
45274535 |
tgggcgaaagacctaaatttagtaaatatggattttgaaacagactcaaaagtggtggtagagaatatctataagggggatggtgtctcagatttcatgg |
45274436 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || |||||||||||||||||||||| || |||| |||| |
|
|
| T |
45274435 |
ccataatacacgattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgctcataatctagc |
45274336 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
45274335 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc |
45274243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 118 - 383
Target Start/End: Original strand, 35322245 - 35322510
Alignment:
| Q |
118 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
215 |
Q |
| |
|
||||| |||||||||||||| || ||||||| |||||||| ||| |||||| ||||||||| |||| ||||| || ||| |||||||||| || || |
|
|
| T |
35322245 |
atggaattcgaaacagactcaaaagttgtggctgatagcatatatggcaaggag--ggtgtctctgatttcatggcaataatcaatgattgtagacactt |
35322342 |
T |
|
| Q |
216 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
315 |
Q |
| |
|
||| | | ||| |||| ||||||||||||| || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
35322343 |
gttgagtaccgatttagtgaactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
35322442 |
T |
|
| Q |
316 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||| | |||||||| || || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
35322443 |
ctccacattcatcttaacattccacattgtatttcttctttgatcaataatgaaaagctataagcttc |
35322510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 6663165 - 6663242
Alignment:
| Q |
220 |
atgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaa |
297 |
Q |
| |
|
||||| || ||||||||||||||||||| |||||||||| |||| |||||||| |||||||| |||| ||||||| |
|
|
| T |
6663165 |
atgattgatttagcaaactctgatgtgaagtttattaggatacaatttaatagtgttgcccatagtttagttagggaa |
6663242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 381
Target Start/End: Original strand, 3215179 - 3215207
Alignment:
| Q |
353 |
ctttgattaataatgaaaagctataagct |
381 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
3215179 |
ctttgattaataatgaaaagctataagct |
3215207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 36481138 - 36480759
Alignment:
| Q |
1 |
ggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||| | ||||||||||| ||| |||||||||||||||| ||||| ||| | || ||||||||||||||||||| |
|
|
| T |
36481138 |
ggtaattttgtcgcaggtcgaacaacctttttatcccctttacttgatgtagagatgggtgaagcgataggactgctacaagcaatgcagtgggcgaaag |
36481039 |
T |
|
| Q |
101 |
agcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcca |
200 |
Q |
| |
|
||||||| |||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| || || || |
|
|
| T |
36481038 |
agcttaacatggtgagcatggattttgaaacagactcaaagattgtggcagatagtgtttataaaggaaatggtgtctctgattttatggcaataattca |
36480939 |
T |
|
| Q |
201 |
tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagca |
300 |
Q |
| |
|
|||||||| || ||||| |||| ||| |||| |||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
36480938 |
agattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattaggagacaagccaatggtgttgcccatagtttagctagggaagcg |
36480839 |
T |
|
| Q |
301 |
ttatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc |
380 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
36480838 |
ctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc |
36480759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 199 - 386
Target Start/End: Original strand, 48254960 - 48255147
Alignment:
| Q |
199 |
catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag |
298 |
Q |
| |
|
|||||| |||| |||||||| |||| ||| |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||| |||||||| |
|
|
| T |
48254960 |
catgatcgtagacatttgttgatgaccgatttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagttagggaag |
48255059 |
T |
|
| Q |
299 |
cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttcctt |
386 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
48255060 |
cactatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttcctt |
48255147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 383
Target Start/End: Complemental strand, 36221019 - 36220727
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| |||||||| ||||| || | |||||||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
36221019 |
tgggcgaaagacctaaatttagtaaatatggatttcgaaacggactcaaaagtggtggcagagaatatctataagggggatggtgtctcagatttcatgg |
36220920 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| | ||||||||||||||||||||| | ||||||| |||| |
|
|
| T |
36220919 |
ccataatacacgattgtagacatctattaatgactgatttagcgaactctgatgtgaagtccattaggagacaagccaatagtattgcccataatctagc |
36220820 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
36220819 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttgattaataatgaaaagctataagcttc |
36220727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 118 - 383
Target Start/End: Original strand, 6682672 - 6682937
Alignment:
| Q |
118 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
215 |
Q |
| |
|
|||||||| ||||||||||| || ||||||| |||||||| ||| |||||| ||||||||| |||||||||| || ||| |||||||||| || || |
|
|
| T |
6682672 |
atggactttgaaacagactcaaaagttgtggctgatagcatatatggcaaggag--ggtgtctctgattttatggcaataatcaatgattgtagacactt |
6682769 |
T |
|
| Q |
216 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
315 |
Q |
| |
|
||| | | ||| |||| ||||||||||| | || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
6682770 |
gttgagtaccgatttagtgaactctgatgtaaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
6682869 |
T |
|
| Q |
316 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||| | |||||||| || || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
6682870 |
ctccacattcatcttaacattccacattgtatttcttctttgatcaataatgaaaagctataagcttc |
6682937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 370
Target Start/End: Complemental strand, 12702233 - 12701957
Alignment:
| Q |
94 |
gcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggcca |
193 |
Q |
| |
|
|||||||| || |||||||||| ||||| |||||||| ||||| || | || ||||| || || ||||| |||||||| ||||| ||||| ||||||| |
|
|
| T |
12702233 |
gcgaaagacctaaatttggtaaatatggatttcgaaacggactcaaaagtggtagcagaaagtatctataagggagatggggtctcaaatttcatggcca |
12702134 |
T |
|
| Q |
194 |
tcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctag |
293 |
Q |
| |
|
| || || |||||||| || | ||||||| || ||||| ||||||||||||| || |||||||||||| |||||||| | ||| ||| || |||| |
|
|
| T |
12702133 |
taatacacgattgtagacacctattaatgactgatttagcgaactctgatgtgaagttcattaggagacaaaccaatagttttgcctataatctaactag |
12702034 |
T |
|
| Q |
294 |
ggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaa |
370 |
Q |
| |
|
||||||| || ||| |||||||||| | |||| |||||| || |||| |||| | |||||||||||||||||| |
|
|
| T |
12702033 |
ggaagcactaaatcatcctagtttccattatcatcctaatattccacattctatacatactttgattaataatgaaa |
12701957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 370
Target Start/End: Original strand, 12904047 - 12904249
Alignment:
| Q |
168 |
agatggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagcc |
267 |
Q |
| |
|
|||||||||||| ||||| |||||||| || || |||||||| || | ||||||| || ||||| ||||| |||||| || ||||||||||||||| |
|
|
| T |
12904047 |
agatggtgtctcaaatttcatggccataatacacgattgtagacacctattaatgactgatttagcgaactcatatgtgaagttcattaggagacaagcc |
12904146 |
T |
|
| Q |
268 |
aatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatg |
367 |
Q |
| |
|
|||||||| ||| ||| || ||||||||||| || ||| |||||||||| | ||||||||||| || |||| |||| | ||||||||||||||| |
|
|
| T |
12904147 |
aatagtgttgcctataatctaactagggaagcactaaatcatcctagtttccattatcatcttaatattccacattctatacatactttgattaataatg |
12904246 |
T |
|
| Q |
368 |
aaa |
370 |
Q |
| |
|
||| |
|
|
| T |
12904247 |
aaa |
12904249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 172 - 296
Target Start/End: Complemental strand, 33037261 - 33037137
Alignment:
| Q |
172 |
ggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaata |
271 |
Q |
| |
|
||||||||| |||| ||| |||| || || ||||||| ||| ||||||||| | ||| ||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
33037261 |
ggtgtctctgatttcatgaccataatacacaattgtagacatctgttaatgactaatttaacaaactctgatgtgaagtttattaggagacaaaccaata |
33037162 |
T |
|
| Q |
272 |
gtgtagcccatagcttagctaggga |
296 |
Q |
| |
|
|||| |||||||| ||||||||||| |
|
|
| T |
33037161 |
gtgttgcccatagtttagctaggga |
33037137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0570 (Bit Score: 183; Significance: 7e-99; HSPs: 1)
Name: scaffold0570
Description:
Target: scaffold0570; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 5214 - 4839
Alignment:
| Q |
1 |
ggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaag |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||| | ||||||||||| ||| |||||||||||||||| ||||| ||| | || ||||||||||||| ||||| |
|
|
| T |
5214 |
ggtaattttgtcgcaggtcgaacagcctttttatcccctttacttgatgtagagatgggtgaagcgataggactgctacaagcaatgcagtgggtgaaag |
5115 |
T |
|
| Q |
101 |
agcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcca |
200 |
Q |
| |
|
||||||| |||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| || || || |
|
|
| T |
5114 |
agcttaacatggtgagcatggattttgaaacagactcaaagattgtggcagatagtgtttataaaggaaatggtgtctctgattttatggcaataattca |
5015 |
T |
|
| Q |
201 |
tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagca |
300 |
Q |
| |
|
|||||||| || ||||| |||| ||| |||| |||||||||||||||||| ||||| |||||||||||| |||| |||||||| |||||| || | |
|
|
| T |
5014 |
agattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattagaagacaagccaatggtgttgcccatagtttagct----aaacg |
4919 |
T |
|
| Q |
301 |
ttatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc |
380 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
4918 |
ctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc |
4839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0479 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0479
Description:
Target: scaffold0479; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 170 - 390
Target Start/End: Original strand, 10765 - 10985
Alignment:
| Q |
170 |
atggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaa |
269 |
Q |
| |
|
||||||||||| |||||||| | || |||||||||||||| || ||||| |||| ||| ||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10765 |
atggtgtctctgattttatgccaattatccatgattgtagacacttgttgatgaccgatttaacaaactctgatgtgagtttaattaggagacaagccaa |
10864 |
T |
|
| Q |
270 |
tagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaa |
369 |
Q |
| |
|
| |||| |||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
10865 |
tcgtgttgcccatagtttagctaaggaagcattatcacatgctagtttccaattatattttaatattccacattgtataactactttgattaataatgaa |
10964 |
T |
|
| Q |
370 |
aagctataagcttccttttct |
390 |
Q |
| |
|
|||| |||| |||||||||| |
|
|
| T |
10965 |
aagcaataaaattccttttct |
10985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 382
Target Start/End: Original strand, 39648177 - 39648432
Alignment:
| Q |
127 |
gaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcg |
226 |
Q |
| |
|
|||||||||||||| |||| | ||| || ||||| ||||| |||||||||||| ||||||||||||| || ||||||||||| || ||||| |||| | |
|
|
| T |
39648177 |
gaaacagactctaaagttgtagtagacagtatttacaaaggggatggtgtctctgattttatggccataattcatgattgtagacacttgttgatgactg |
39648276 |
T |
|
| Q |
227 |
acttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgca |
326 |
Q |
| |
|
| ||||| ||||| ||||||| || || | |||||| ||||||||||| |||||||| ||||||| ||||||| ||| ||||||||||| | | ||| |
|
|
| T |
39648277 |
atttagcgaactcagatgtgaagttcatcaagagacaggccaatagtgttgcccatagtttagctaaggaagcactatattatgctagtttcgagtagca |
39648376 |
T |
|
| Q |
327 |
tcttaatatccctcattgtataacttctttgattaataatgaaaagctataagctt |
382 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39648377 |
tcttaatattctacattgtataacttctttgattaataaagaaaagctataagctt |
39648432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 383
Target Start/End: Original strand, 12997140 - 12997432
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| || ||||||||||| || | |||| ||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
12997140 |
tgggcgaaagacctaaatttagtaaatatggattttgaaacagactcaaaagtggtggtagagaatatctataagggggatggtgtctcagatttcatgg |
12997239 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
12997240 |
ccataatacacgattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagc |
12997339 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
12997340 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc |
12997432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 383
Target Start/End: Original strand, 26423107 - 26423399
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| ||| |||| ||||| || | |||||||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
26423107 |
tgggcgaaagacctaaatttagtaaatatggatttcaaaacggactcaaaagtggtggcagagaatatctataagggggatggtgtctcagatttcatgg |
26423206 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
||| || || |||||||| ||| | ||||||| || |||| ||||||||||||| || ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
26423207 |
tcataatacacgattgtagacatctattaatgactgatttagtgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagc |
26423306 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || | |||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
26423307 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacgttgtattcatactttgattaataatgaaaagctataagcttc |
26423399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 26999364 - 26999250
Alignment:
| Q |
182 |
attttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagccca |
281 |
Q |
| |
|
|||||||||| || || | ||||||||| || ||||| ||||| || |||| ||||||||| ||| || ||||| |||||||||||||| | ||||| |
|
|
| T |
26999364 |
attttatggctataattcgtgattgtagacacttgttgatgattgatttagtgaactctgatttgaagttcattagaagacaagccaatagagccgccca |
26999265 |
T |
|
| Q |
282 |
tagcttagctaggga |
296 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
26999264 |
tagtttagctaggga |
26999250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 381
Target Start/End: Complemental strand, 14150270 - 14150242
Alignment:
| Q |
353 |
ctttgattaataatgaaaagctataagct |
381 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14150270 |
ctttgattaataatgaaaagctataagct |
14150242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 91 - 382
Target Start/End: Complemental strand, 22697848 - 22697557
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| |||||||| ||||| || | |||||||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
22697848 |
tgggcgaaagacctaaatttagtaaatatggatttcgaaacggactcaaaagtggtggcagagaatatctataagggggatggtgtctcagatttcatgg |
22697749 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
22697748 |
ccataatacacgattgtagacatctattaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagc |
22697649 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagctt |
382 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
22697648 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttgattaataatgaaaagctataagctt |
22697557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 383
Target Start/End: Original strand, 31089315 - 31089607
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| || ||||||||||| || | |||| ||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
31089315 |
tgggcgaaagacctaaatttagtaaatatggattttgaaacagactcaaaagtggtggtagagaatatctataagggggatggtgtctcagatttcatgg |
31089414 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
31089415 |
ccataatacacgattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagc |
31089514 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
31089515 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc |
31089607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 37 - 383
Target Start/End: Original strand, 24442400 - 24442746
Alignment:
| Q |
37 |
cctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaagagcttaatttggtaagcatggacttcgaaacagact |
136 |
Q |
| |
|
|||||||| ||| | || ||||||||||| ||||| || |||| || |||| ||||||||||| || |||||||||| ||||| |||||||| |||| |
|
|
| T |
24442400 |
cctttacttgatgtggaaatgggtgaagctataggactcctgcatgctatgcgatgggcgaaagacctaaatttggtaaatatggatttcgaaacggact |
24442499 |
T |
|
| Q |
137 |
ctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaa |
236 |
Q |
| |
|
| || | |||||||| || || ||||| | |||||||| || |||| |||||||| || || |||||||| ||| | ||||||| || ||||| || |
|
|
| T |
24442500 |
caaaagtggtggcagagagtatctataagagggatggtgtatcagatttcatggccataatacacgattgtagacatctattaatgactgatttagcgaa |
24442599 |
T |
|
| Q |
237 |
ctctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatc |
336 |
Q |
| |
|
||||||||||| || |||||||||||| |||||||||| ||||||| ||||||| |||||| || |||||||||||||| | ||||||||||| |
|
|
| T |
24442600 |
ctctgatgtgaagttcattaggagacaaaccaatagtgttgcccataatctagctagagaagcactaaatcatgctagtttccattatcatcttaatatt |
24442699 |
T |
|
| Q |
337 |
cctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
| |||||||| | |||||||||||||| |||| ||||||||||| |
|
|
| T |
24442700 |
ctacattgtattcatactttgattaataattaaaaactataagcttc |
24442746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 383
Target Start/End: Original strand, 18678373 - 18678674
Alignment:
| Q |
82 |
gcaatgcagtgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctcta |
181 |
Q |
| |
|
|||||||| |||| |||||||| ||| |||| |||||||||||||||| ||| ||| || |||||||||||||| ||| | || | ||||||| |
|
|
| T |
18678373 |
gcaatgcaatgggtaaaagagctgaatatggtgcacatggacttcgaaacaaactataaaatagtggcagatagcatatatggaaaggacgatgtctctg |
18678472 |
T |
|
| Q |
182 |
attttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagccca |
281 |
Q |
| |
|
|||| ||||| || || |||||||||| ||||||||| | ||| |||| ||||||| |||||||||| ||||||||||||||||||||||| || || |
|
|
| T |
18678473 |
atttcatggcaataattaatgattgtagacatttgttaggtaccgatttagtaaactctaatgtgagtttcattaggagacaagccaatagtgttgctca |
18678572 |
T |
|
| Q |
282 |
tagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagct |
381 |
Q |
| |
|
||| ||||||| |||| || ||| |||||||| |||| | |||||||| |||| |||||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
18678573 |
tagtttagctaaggaatcactatacaatgctagtctccatgttcatcttaacatcctacattgtatttctacttcaattaataatgaaaagctataagct |
18678672 |
T |
|
| Q |
382 |
tc |
383 |
Q |
| |
|
|| |
|
|
| T |
18678673 |
tc |
18678674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 118 - 383
Target Start/End: Complemental strand, 33305198 - 33304933
Alignment:
| Q |
118 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
215 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||||||| ||| |||||| ||||||||| |||| ||||| || ||| |||||||||| || || |
|
|
| T |
33305198 |
atggacttcgaaacagactcaaaagttgtggctgatagcatatatggcaaggag--ggtgtctctgatttcatggcaataatcaatgattgtagacactt |
33305101 |
T |
|
| Q |
216 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
315 |
Q |
| |
|
||| | | ||| |||| ||||||||||||| || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
33305100 |
gttgagtaccgatttagtgaactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
33305001 |
T |
|
| Q |
316 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|||| | |||||||| || || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
33305000 |
ctccacattcatcttaacattccacattgtatttcttctttgatcaataatgaaaagctataagcttc |
33304933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 20864042 - 20864177
Alignment:
| Q |
250 |
tttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataa |
349 |
Q |
| |
|
|||||||| ||||||||||| ||||| || |||||| |||||||||| |||||| |||||| ||||||||| ||| | || || |||| ||| |
|
|
| T |
20864042 |
tttattagaagacaagccaacagtgttgctcatagcatagctagggaggcattacataatgctattttccaatttcatt---acattccacattctattc |
20864138 |
T |
|
| Q |
350 |
cttctttgattaataatgaaaagctataagcttcctttt |
388 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20864139 |
atactttgattaataatgaaaagctataagcttcttttt |
20864177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 383
Target Start/End: Complemental strand, 17904946 - 17904654
Alignment:
| Q |
91 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
190 |
Q |
| |
|
||||||||||| || |||||||||| ||| | |||||||| ||||| || | |||| ||| || || ||||| | ||||||||||| |||| |||| |
|
|
| T |
17904946 |
tgggcgaaagacctaaatttggtaaatatgaatttcgaaacggactcaaaagtggtggaagaaagtatctataagagggatggtgtctcagatttcatgg |
17904847 |
T |
|
| Q |
191 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
290 |
Q |
| |
|
|||| || | |||||||| || | ||||||| || ||||| ||||||||||||| || ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
17904846 |
ccataatatacgattgtagacacctattaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagc |
17904747 |
T |
|
| Q |
291 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
||||||| || || |||||||||||||| | |||| |||||| || ||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
17904746 |
tagggaaacactaaatcatgctagtttccattatcatcctaatattccacattgtatacatactttgattaataatgaaaagctataagcttc |
17904654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1476 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1476
Description:
Target: scaffold1476; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 383
Target Start/End: Complemental strand, 1385 - 1238
Alignment:
| Q |
236 |
actctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatat |
335 |
Q |
| |
|
||||| ||||||||||| || ||||| ||| |||| ||| | ||||| ||||||| | ||||| ||| ||||||||| ||||| | |||| ||| || |
|
|
| T |
1385 |
actctaatgtgagttttgttcggagagaagtcaatggtgctgttcatagtttagctaagcaagcactataccatgctagtctccaaattcatcgtaacat |
1286 |
T |
|
| Q |
336 |
ccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|| |||||||| || |||||||||||||||||||||||||| |||| |
|
|
| T |
1285 |
tccacattgtatttctactttgattaataatgaaaagctataaacttc |
1238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0233 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0233
Description:
Target: scaffold0233; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 383
Target Start/End: Complemental strand, 19399 - 19250
Alignment:
| Q |
234 |
aaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaat |
333 |
Q |
| |
|
|||||||||||||| || ||||||||||||| |||| |||| || |||| ||| ||| ||||||| | || ||||| |||| | ||||||||| |
|
|
| T |
19399 |
aaactctgatgtgaagttcattaggagacaagtcaatggtgttgcttatagtttaactaaggaagcacaacaccacactagtctccacattcatcttaat |
19300 |
T |
|
| Q |
334 |
atccctcattgtataacttctttgattaataatgaaaagctataagcttc |
383 |
Q |
| |
|
|| || |||||||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
19299 |
attccacattgtattcctactttgatcaataatgaaaagctataagcttc |
19250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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