View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20264_high_8 (Length: 474)

Name: NF20264_high_8
Description: NF20264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20264_high_8
NF20264_high_8
[»] chr6 (6 HSPs)
chr6 (94-467)||(32641183-32641560)
chr6 (94-286)||(32643250-32643439)
chr6 (204-284)||(24085315-24085395)
chr6 (198-284)||(18001300-18001386)
chr6 (195-270)||(3384899-3384974)
chr6 (231-284)||(17996659-17996712)
[»] chr5 (5 HSPs)
chr5 (94-284)||(8698962-8699149)
chr5 (195-283)||(19227027-19227115)
chr5 (195-254)||(40622529-40622588)
chr5 (205-284)||(511109-511188)
chr5 (208-284)||(5200266-5200342)
[»] chr7 (8 HSPs)
chr7 (94-284)||(9491495-9491687)
chr7 (95-284)||(47669695-47669884)
chr7 (195-284)||(47521472-47521561)
chr7 (195-284)||(27450200-27450289)
chr7 (198-273)||(16680946-16681021)
chr7 (198-273)||(17655182-17655257)
chr7 (231-284)||(11100413-11100466)
chr7 (219-280)||(19804410-19804471)
[»] chr3 (11 HSPs)
chr3 (94-280)||(42804494-42804677)
chr3 (94-284)||(30252627-30252817)
chr3 (195-284)||(50759287-50759376)
chr3 (195-284)||(48891996-48892085)
chr3 (195-284)||(16861242-16861330)
chr3 (195-284)||(17561846-17561935)
chr3 (195-284)||(44233190-44233279)
chr3 (193-285)||(48566293-48566385)
chr3 (195-284)||(6928598-6928687)
chr3 (195-284)||(49265849-49265938)
chr3 (208-284)||(41615757-41615833)
[»] chr2 (5 HSPs)
chr2 (94-284)||(40538895-40539080)
chr2 (195-284)||(36652967-36653056)
chr2 (201-284)||(6637621-6637705)
chr2 (195-284)||(16327480-16327569)
chr2 (94-173)||(22443305-22443383)
[»] chr4 (7 HSPs)
chr4 (195-285)||(8111312-8111402)
chr4 (195-284)||(46439485-46439574)
chr4 (200-284)||(50020178-50020262)
chr4 (195-282)||(50196807-50196894)
chr4 (94-164)||(10729606-10729676)
chr4 (94-164)||(10943375-10943445)
chr4 (205-282)||(72412-72489)
[»] chr1 (6 HSPs)
chr1 (198-284)||(51337387-51337473)
chr1 (195-284)||(47505810-47505897)
chr1 (195-284)||(35255910-35255999)
chr1 (195-284)||(45829053-45829142)
chr1 (195-284)||(47661339-47661428)
chr1 (94-173)||(49854635-49854715)
[»] chr8 (6 HSPs)
chr8 (195-284)||(35555069-35555158)
chr8 (195-284)||(40075194-40075283)
chr8 (195-280)||(20859499-20859586)
chr8 (195-279)||(39831240-39831324)
chr8 (195-285)||(52556-52647)
chr8 (195-253)||(34819118-34819176)
[»] scaffold0155 (1 HSPs)
scaffold0155 (94-173)||(12709-12789)
[»] scaffold0219 (1 HSPs)
scaffold0219 (195-285)||(313-403)


Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 94 - 467
Target Start/End: Complemental strand, 32641560 - 32641183
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtnnnnnnnnnnnnnca---g 190  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||              |   |    
T  32641560 cattggttcattagtttcttcgtttaatcagtgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtaaaaaaaaaaaaaaaaaag 32641461  T
Q  191 gtacat--gttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttactatac 288  Q
    ||| ||  ||||| ||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32641460 gtatatatgttgtattttgtgtttgaaacacattacagatt-aggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttactatac 32641362  T
Q  289 gtcttatatattaattcaagcggaggtcttatttatcctcgtcatacctttctttctttagtttttactcaatatggccaaactatacctcttatgtatt 388  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||    
T  32641361 gtcttatatattagttcaagtggaggtcttatttatcctcgtcatacctttctttctttattttttactcaatatgcccaaactatacgtctcatgtatt 32641262  T
Q  389 agttcaagtggaggtcttatttcgggttgcaatctcccaatctaggaaaaaagcgagatatggtctacaaccacctatg 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32641261 agttcaagtggaggtcttatttcgggttgcaatctcccaatctaggaaaaaagcgagatatggtctacaaccacctatg 32641183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 94 - 286
Target Start/End: Original strand, 32643250 - 32643439
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtnnnnnnnnnnnnncaggta 193  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||| || ||||||||||             ||||||    
T  32643250 cattggttcattagtttcttcgtttaatcattgtttgttaaatttagccaatttttttttgtcattttaatcattatgcgtaaaaaaaa-----caggta 32643344  T
Q  194 cat--gttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttactat 286  Q
    |||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32643345 catatgttgtgttttgtgtttaaaacacattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggtagtttactat 32643439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 24085395 - 24085315
Alignment:
Q  204 tttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  24085395 tttgtgtttgaaatacattacaggtttaggaaatgaagctactgcctctgttttggcttcaggacgcttcggcagtttact 24085315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 18001386 - 18001300
Alignment:
Q  198 ttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||| ||| |||  ||||||||||    
T  18001386 ttgtgttttgtgtttgaaacacattacaagtttaggaaatgaagctactgcctctgccttggcttcatgacacttatgcagtttact 18001300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 3384899 - 3384974
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgc 270  Q
    ||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||||| ||| |||||||||||    
T  3384899 atgttgtgttttgtgtttgaaacacattacaagatcagaaaatgaagctactgcctctgcattggcttcaggacgc 3384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 17996712 - 17996659
Alignment:
Q  231 aggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  17996712 aggaaatgaagctactgcctctgccttggcttcaggacaattcggcagtttact 17996659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 1e-57; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 94 - 284
Target Start/End: Complemental strand, 8699149 - 8698962
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtnnnnnnnnnnnnncaggta 193  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||             ||||||    
T  8699149 cattggttcattagtttcttcgtttaatcagtgtttgttaaattgagccaattttgtttttccatttgaaccattatgcgtaaaaaaaa-----caggta 8699055  T
Q  194 cat--gttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||  |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  8699054 catatgttgtgttttgtttttgaaacacattacaggttcaggaaatgaagctattgcctctgccttgacttcaggacgcttcgacagtttact 8698962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 19227115 - 19227027
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttac 283  Q
    ||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19227115 atgttgtgttttgtgtttgaaacacattaaaggtttatgaaatgaagctactgcctctgccttggcttcaggacgcttcggcagtttac 19227027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 40622588 - 40622529
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgc 254  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  40622588 atgttgtgttttgtgtttgaaacacattacaggtttaggaaatgaagctactgcctctgc 40622529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 511188 - 511109
Alignment:
Q  205 ttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||| ||| ||||||| ||| |||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  511188 ttgtgtttgcaacacattacatgtttaggaaatgaagctactgcctttgctttggcttcaggatgcttcggcagtttact 511109  T

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Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 5200266 - 5200342
Alignment:
Q  208 tgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||| |||| |||||||||||||||||| |  |||||||| |||| ||||||||||||| |||||||||||    
T  5200266 tgtttgaaacacattgcaggttcaggaaatgaagttgttgcctctgtcttggcttcaggacgctttggcagtttact 5200342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 8e-56; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 94 - 284
Target Start/End: Complemental strand, 9491687 - 9491495
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtnnnnnnnnnnnnncaggta 193  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||    
T  9491687 cattggttcattagtttgttagtttaatcagtgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtaaaaaaataaaaacaggta 9491588  T
Q  194 cat--gttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||  ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  9491587 catatgttgtgttttgtgtttgaaacacattacaggtttaggaaatgaagctactgcctctgcattggcttcaggacgcttcagcagtttact 9491495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 95 - 284
Target Start/End: Complemental strand, 47669884 - 47669695
Alignment:
Q  95 attggttcattagtttcttcgtttaat---caatgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtnnnnnnnnnnnnncagg 191  Q
    |||||||||||||||||||||||||||   || ||||||||||  ||||||||||||||||||||||||||||||||||||||             |||     
T  47669884 attggttcattagtttcttcgtttaataatcagtgtttgttaatatgagccaattttgttttgccatttgaaccattatgcgtaaaaaaaa-----cagt 47669790  T
Q  192 tacat--gttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||  ||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  47669789 tacatatgttctgttttgtgtttgaaacacattacaggttcaggaaatgaatctactgcctctgccttggcttcaggacgcttcggcagtttact 47669695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 47521561 - 47521472
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  ||| |||||||||||||| ||||||||||    
T  47521561 atgttgtgttttgtgtttgaaacacattacaggttcaggaaatgaagctactgtctctgttttggcttcaggacgcttcagcagtttact 47521472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 27450289 - 27450200
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||| |||| ||||||||||||||| |||||||||    
T  27450289 atgttgtgttttgtgtttgaaacacattataggttcaggaaatgaagttcctgcctctgtcttggcttcaggacgcttcgacagtttact 27450200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 16680946 - 16681021
Alignment:
Q  198 ttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttc 273  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | || ||||||||||||||    
T  16680946 ttgtgttttgtgtttgaaacacattacaggttcaggaaatgaagctactgcctctgtcctggcttcaggacgcttc 16681021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 17655182 - 17655257
Alignment:
Q  198 ttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttc 273  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | || ||||||||||||||    
T  17655182 ttgtgttttgtgtttgaaacacattacaggttcaggaaatgaagctactgcctctgtcctggcttcaggacgcttc 17655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 11100413 - 11100466
Alignment:
Q  231 aggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  11100413 aggaaatgaagctactgcctctgccttggcttcaggacaattcggcagtttact 11100466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 19804410 - 19804471
Alignment:
Q  219 cattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtt 280  Q
    |||| |||||||| ||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  19804410 cattgcaggttcaagaaatgaagctgctgcctctgtcttggcttcaggacgcttcggcagtt 19804471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 42804677 - 42804494
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtnnnnnnnnnnnnncaggta 193  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||             ||||||    
T  42804677 cattggttcattactttgttcgtttaatcagtgtttgttaaattgagccaattttgttttgccatttgaaccataatgagtaaaaaaaa-----caggta 42804583  T
Q  194 cat--gttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtt 280  Q
    |||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  42804582 catatgttgtgttttgtgtttgaaacacattacaggttcaggaaatgaagctactgcctctgctttggcttcaggacgcttcggcagtt 42804494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 94 - 284
Target Start/End: Complemental strand, 30252817 - 30252627
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtnnnnnnnnnnnnncaggta 193  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||              |||||    
T  30252817 cattggttcattagtttgttcgtttaatcagtgtttgttaaattgagccaattttgttttgccatttgaaccattatgtgtaaaaaaaaaa----aggta 30252722  T
Q  194 c--atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgcc--ttgacttcaggacgcttcggcagtttact 284  Q
    |  ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||  ||| ||| |||||||||||||| ||||||    
T  30252721 catatgttgtgttttgtgtttgaaacacattacaggtttaggaaatgaagctattgcctttgccttttggctttaggacgcttcggcaatttact 30252627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 50759287 - 50759376
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  50759287 atgttgtgttttgtgtttgaaacacattacaggttcatgaaatgaagctactgcctctgccttggcttcaggacgcttcggcagtttact 50759376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 48891996 - 48892085
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  48891996 atgttgtgttttgtgtttgaaacacattagaggttcaggaaatgaagctactgcctctgccttggcttcgggacgcttcggcagtttact 48892085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 16861330 - 16861242
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||    
T  16861330 atgttgtgttttgtgtttgaaacacattacaggttcaggaaatgaagctactgcctctatcttg-cttcaggacgcttcggcagtttact 16861242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 17561935 - 17561846
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||    
T  17561935 atgttgtgttttgtgtttgaaacacattacagattcaggaaatgaagctactgtctctgtcttggcttcaggacacttcggcagtttact 17561846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 44233190 - 44233279
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| |||||||||    
T  44233190 atgttgtgttttgtgtttgaaatacattacaggttcaggaaatgaagctactgcctctgtcttggcttcaggacgcatcgacagtttact 44233279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 48566293 - 48566385
Alignment:
Q  193 acatgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttacta 285  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||| |||||||||||||||| |||| ||||    
T  48566293 acatgttgtgttttgtgtttgaaacacattacaagtttaggaaatgaagctactgcctctaccttggcttcaggacgcttcggtagttaacta 48566385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 6928598 - 6928687
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||| ||| ||||||  |||||||    
T  6928598 atgttgtgttttgtgtttgaaacacattacaggtttaggaaatgaagctactgcctctgctttggcttcacgacacttcggttgtttact 6928687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 49265938 - 49265849
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||  ||| ||||| |||||||| ||||||||||    
T  49265938 atgttgtgttttgtgtttgaaacacattacaggttcaggaaatgaagctagtacctctgttttggcttcaagacgcttctgcagtttact 49265849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 41615757 - 41615833
Alignment:
Q  208 tgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||| |||| |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  41615757 tgtttgaaacacattgcaggttcaggaaatgaagctgctgcctctgtcttggcttcaggacgcttcggcagtttact 41615833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 94 - 284
Target Start/End: Original strand, 40538895 - 40539080
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaaccattatgcgtnnnnnnnnnnnnncaggta 193  Q
    |||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||| |||||||||||| |||             ||||||    
T  40538895 cattggttcattagtttcttcgtttaataagtgtttgttaacatgagccaattttgttttgccaattgaaccattattcgtgaaaaaaaa----caggta 40538990  T
Q  194 catgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||| | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  40538991 catat-gttttttgtgtttgaaacacattacaggttcaggaaatgaagctactgcctctgccttggcttcaggacgcttcgacagtttact 40539080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 36653056 - 36652967
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  36653056 atgttgtgttttgtgtttgaaacacattacaggttcaggaaatgaagctactgcctctgtcttggcttcaggacgctttggcagtttact 36652967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 6637705 - 6637621
Alignment:
Q  201 tgttttgtg-tttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||| |||||| | |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  6637705 tgttttgtgatttgaagcacattacaggttcaggaaatgaacctactgcctctgtcttgacttcaggacgcttcggcagtttact 6637621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 16327569 - 16327480
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||| | ||| ||| ||||||| | | |||||||||    
T  16327569 atgttgtgttttgtgtttgaaacacattacacgatcagaaaatgaagctactgcctctacattggcttgaggacgcattgacagtttact 16327480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 22443305 - 22443383
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaac-cattatgcg 173  Q
    |||||||||||| |||| || ||||||||||   |||| || || ||||||||||||||| |||||||||| |||||||||    
T  22443305 cattggttcattggtttgttggtttaatcaag--ttgtgaatttaagccaattttgtttttccatttgaacacattatgcg 22443383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 8111312 - 8111402
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttacta 285  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  8111312 atgttgtgttttgtgtttgaaacacattacaggttcaggaaatgaagctactgcctctgacttggcttcaggacgcttcggcagtttacta 8111402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 46439485 - 46439574
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  46439485 atgttgtgttttgtgtttgaaacacattataggtttaggaaatgaagctactgcctctgctttggcttcaggacgcttcggctgtttact 46439574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 50020262 - 50020178
Alignment:
Q  200 gtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||  ||||||||||||| ||||||||||    
T  50020262 gtgttttgtgtttgaaacacattacaggttcaggaaatgaagctaccgcctctgtcttggtttcaggacgcttcagcagtttact 50020178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 50196807 - 50196894
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagttta 282  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||| || |||||| |||| ||||||||||||||| |||||||    
T  50196807 atgttgtattttgtgtttgaaacacattgcaggttcaggaaatgaagctcctacctctgtcttggcttcaggacgcttcgacagttta 50196894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 10729676 - 10729606
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaac 164  Q
    ||||||||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||||||||||    
T  10729676 cattggttcattagtttgttcgtttaattaatgtttcttgaattgagccaattttgttttgccatttgaac 10729606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 10943445 - 10943375
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaac 164  Q
    ||||||||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||||||||||    
T  10943445 cattggttcattagtttgttcgtttaattaatgtttcttgaattgagccaattttgttttgccatttgaac 10943375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 72412 - 72489
Alignment:
Q  205 ttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagttta 282  Q
    ||||||||||||| ||||||| ||| || ||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  72412 ttgtgtttgaaacacattacaagtttagtaaatgaagctactgcctctgctttggcttcaggacgcttcgacagttta 72489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 198 - 284
Target Start/End: Original strand, 51337387 - 51337473
Alignment:
Q  198 ttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  51337387 ttgtgttttgtgtttgaaacacattacaggtttaggaaatgaagctactgcctctgccttggcttcaggacacttcggcagtttact 51337473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 47505810 - 47505897
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  47505810 atgttgtgttttgt--ttgaaacacattacaggttcaggaaatgaagctactgcctctgtcttggcttcaggacgcttcggcagtttact 47505897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 35255999 - 35255910
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||||||||||||||||  ||||||||||||  ||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  35255999 atgttgtgttttgtgtttgaaacaaattacaggttcaacaaatgaagctattgcctctgccttggcttcaggatgcttcggcagtttact 35255910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 45829053 - 45829142
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||  |||||||||    
T  45829053 atgttgtgttttttgtttgaaacacattacaggttcaggaaatgaagctactgcctctgatttggcttcaggacgcttcaacagtttact 45829142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 47661339 - 47661428
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||| ||||||||||||||| || ||||||    
T  47661339 atgttgtgttttgtgtttgaaacacattacaggtttagaaaatgaagctactgcctctgctttggcttcaggacgcttcgacaatttact 47661428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 49854715 - 49854635
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaac-cattatgcg 173  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  49854715 cattggttcattagtttgttcgtttaatcagtgtttgttaaattgagccaattttgttttgtcatttgaacacattatgcg 49854635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 35555069 - 35555158
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||    
T  35555069 atgttgtgttttgtgtttgaaacacattacaggtttaggaaatgaagctactacctctgctttggcttcaggacgcttcgacagtttact 35555158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 40075283 - 40075194
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttact 284  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||| ||||||||    
T  40075283 atgttgtgttttgtgtttgaaacacattacaggtttaggaaatgaagctactgcctctgctttggcttcagaacgcttcggaagtttact 40075194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 20859499 - 20859586
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctc--tgccttgacttcaggacgcttcggcagtt 280  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||  || |||| |||||||||||||||||||||    
T  20859499 atgttgtgttttgtgtttgaaacacattgcaggttcaggaaatgaagctactgcctctttgtcttggcttcaggacgcttcggcagtt 20859586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 195 - 279
Target Start/End: Complemental strand, 39831324 - 39831240
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagt 279  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| || |||||||| |||| ||||||||||||||||||||    
T  39831324 atgttgtgttttgtgtttgaaacacattacaggttccggaaatgaagttaatgcctctgtcttggcttcaggacgcttcggcagt 39831240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 52556 - 52647
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttc-ggcagtttacta 285  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| |||||||||||||| ||||||| ||||    
T  52556 atgttgtgttttgtgtttgaaacacattacaggtttaggaaataaagctactgcctctgtcttggcttcaggacgcttcaggcagttaacta 52647  T

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Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 34819176 - 34819118
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctg 253  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  34819176 atgttgtgttttgtgtttgaaacatattacaggtttaggaaatgaagctactgcctctg 34819118  T

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Target: scaffold0155 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 12709 - 12789
Alignment:
Q  94 cattggttcattagtttcttcgtttaatcaatgtttgttaaattgagccaattttgttttgccatttgaac-cattatgcg 173  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||    
T  12709 cattggttcattagtttgttcgtttaatcaatctttgtttaattgagccaattttgttttaccatttgaacacattatgcg 12789  T

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Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 313 - 403
Alignment:
Q  195 atgttgtgttttgtgtttgaaactcattacaggttcaggaaatgaagctactgcctctgccttgacttcaggacgcttcggcagtttacta 285  Q
    |||||||||||||||||| |||| ||||||||| |||| |||||||| | ||| |||||| ||| |||||||| || |||| |||| ||||    
T  313 atgttgtgttttgtgttttaaacacattacaggatcagaaaatgaagtttctgtctctgcattggcttcaggatgcatcggtagttaacta 403  T

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