View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20266_high_3 (Length: 299)
Name: NF20266_high_3
Description: NF20266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20266_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 37908374 - 37908655
Alignment:
| Q |
1 |
cacaaaattcccaccttcagtaaacaaattattcttcgacaacaaatgatccctaatcctttgatccaacgaggtggccaccatctcagctggtccacca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37908374 |
cacaaaattcccaccttcagtaaacaaattattcttggacaacaaatgatccctaatcctttgatccaacgaggtggccaccatctcagctggtccacca |
37908473 |
T |
|
| Q |
101 |
cgaggacacctaataaccggcacaacaccaagcgtcgccaaaacacaaaacaacccattaacaatcctctcaacaatctcctcaatttcacgatcaccag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37908474 |
cgaggacacctaataaccggcacaacaccaagcgtcgccaaaacacaaaacaacccattaacaatcctctcaacaatctcctcaatttcacgatcaccag |
37908573 |
T |
|
| Q |
201 |
cagacggatcattaagatttaaaaaacaagatttctgagccaacgaaaacaaattatcctcaagtgtaacaaactcaagata |
282 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
37908574 |
cagacggatcattaagattcaaaaaacaagatttctgagccaacgaaaacaaattatcttcaagtgtaacaaactcaagata |
37908655 |
T |
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