View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20268_low_3 (Length: 341)
Name: NF20268_low_3
Description: NF20268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20268_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 13 - 316
Target Start/End: Original strand, 25136395 - 25136699
Alignment:
| Q |
13 |
aaaatagggggttctatatgtcaaaatagttttccttcaaatttattctatatgtcaatgacacatgataaatagggg-tctttatcgtgcaatgtgtgt |
111 |
Q |
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| T |
25136395 |
aaaatagggggttctatatgtcaaattagttttccttcaaatttattctatatgtcaatgacacatgataaatagggggtctttatcgtgcaatgtgtgt |
25136494 |
T |
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| Q |
112 |
catgatcgttaaacctctttgtcattgtcatatagaattcatttgaaggaaaagtaattttttaaatggaaatacatttttcaagcccgatcgaggggtt |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
25136495 |
catgatcgttaaacctctttgtcattgtcatatagaattaatttgaaggaaaagtaatttttggaatggaaatacatttttcaagcccgatcgaggggtt |
25136594 |
T |
|
| Q |
212 |
cttttcagaagattcacacccattacatgagtatgtttcttctacctccatcgttttgggaagataaattatttttggtggggcagaatgttggtcaaga |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |
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| T |
25136595 |
cttttcagaagattcacacccattacatgagtatgtttcttctacctccatcgtttggggaagataagttatttttggtggggcagaatgttggtcaaga |
25136694 |
T |
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| Q |
312 |
acatg |
316 |
Q |
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||||| |
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| T |
25136695 |
acatg |
25136699 |
T |
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