View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20268_low_7 (Length: 261)
Name: NF20268_low_7
Description: NF20268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20268_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 7117577 - 7117339
Alignment:
| Q |
1 |
acttctcatgatgacttgttggtggggataatgacttaaatgtattgggtcttggtattgctatgcggtgggaagatgatagcaacaacaatatcatatc |
100 |
Q |
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| T |
7117577 |
acttctcatgatgacttgttggtggggataatgacttaaatgtattgggtcttggtattgctatgcggtgggaagatgatagcaacaacaatatcatatc |
7117478 |
T |
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| Q |
101 |
atgtactagtaaacatggaggataagatatgacgttaaacaagaaactcatcatcatctctctttgggaccagacatctcacgtgccccacaatcccttt |
200 |
Q |
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| T |
7117477 |
atgtactagtaaacatcgaggataagatatgacgttaaacaagaaactcat---catctctctttgggaccagacatctcacgtgccccacaatcccttt |
7117381 |
T |
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| Q |
201 |
cattaatttctaaaattttatcagagttatgtttggtttcac |
242 |
Q |
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| T |
7117380 |
cattaatttctaaaattttatcagagttatgtttgatttcac |
7117339 |
T |
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