View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20269_high_11 (Length: 311)

Name: NF20269_high_11
Description: NF20269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20269_high_11
NF20269_high_11
[»] chr1 (29 HSPs)
chr1 (21-77)||(28053252-28053308)
chr1 (24-77)||(29450996-29451049)
chr1 (23-76)||(15892792-15892845)
chr1 (37-77)||(30895328-30895368)
chr1 (23-74)||(24752661-24752712)
chr1 (35-78)||(30003194-30003237)
chr1 (23-73)||(48646739-48646789)
chr1 (37-77)||(2636782-2636822)
chr1 (23-71)||(11410627-11410674)
chr1 (22-74)||(14907048-14907100)
chr1 (23-74)||(6219876-6219926)
chr1 (23-74)||(11701963-11702013)
chr1 (35-74)||(18398635-18398674)
chr1 (31-74)||(23309461-23309504)
chr1 (35-74)||(25532970-25533009)
chr1 (35-74)||(27172747-27172786)
chr1 (24-74)||(2613719-2613768)
chr1 (23-61)||(7652111-7652148)
chr1 (35-73)||(10356208-10356246)
chr1 (24-74)||(30678828-30678877)
chr1 (24-74)||(40268207-40268256)
chr1 (24-78)||(50849088-50849141)
chr1 (24-74)||(51046139-51046188)
chr1 (43-72)||(16580832-16580861)
chr1 (24-73)||(43611422-43611470)
chr1 (23-55)||(14125357-14125389)
chr1 (35-74)||(16067150-16067190)
chr1 (22-78)||(29800526-29800581)
chr1 (38-74)||(47692933-47692969)
[»] chr3 (25 HSPs)
chr3 (23-80)||(25874121-25874178)
chr3 (23-71)||(27532834-27532882)
chr3 (35-74)||(1744015-1744054)
chr3 (23-74)||(2186441-2186491)
chr3 (24-75)||(47313386-47313437)
chr3 (35-77)||(34326008-34326050)
chr3 (27-74)||(5030202-5030249)
chr3 (23-74)||(7464505-7464555)
chr3 (35-74)||(28808172-28808211)
chr3 (24-75)||(38108471-38108521)
chr3 (23-74)||(46903905-46903955)
chr3 (36-74)||(7557560-7557598)
chr3 (35-77)||(10843806-10843848)
chr3 (23-77)||(32909315-32909368)
chr3 (31-65)||(50387581-50387615)
chr3 (24-77)||(5117202-5117254)
chr3 (35-72)||(28093353-28093390)
chr3 (23-76)||(46337244-46337296)
chr3 (23-72)||(51047183-51047232)
chr3 (35-72)||(51882225-51882262)
chr3 (37-77)||(14827519-14827559)
chr3 (35-71)||(19468451-19468487)
chr3 (35-75)||(27185473-27185513)
chr3 (35-71)||(38130984-38131020)
chr3 (19-75)||(40862167-40862223)
[»] chr8 (19 HSPs)
chr8 (27-77)||(2958419-2958469)
chr8 (22-60)||(9663066-9663104)
chr8 (24-77)||(1135408-1135461)
chr8 (35-72)||(10601762-10601799)
chr8 (35-74)||(13357466-13357505)
chr8 (23-70)||(13577077-13577124)
chr8 (23-74)||(16823199-16823249)
chr8 (32-67)||(20701473-20701508)
chr8 (23-74)||(21557430-21557480)
chr8 (23-74)||(33373766-33373816)
chr8 (23-74)||(43919606-43919655)
chr8 (35-73)||(10982724-10982762)
chr8 (35-65)||(12800925-12800955)
chr8 (37-78)||(13004158-13004199)
chr8 (24-77)||(38232919-38232971)
chr8 (35-71)||(17898079-17898115)
chr8 (35-79)||(24202143-24202187)
chr8 (35-71)||(32421569-32421605)
chr8 (35-71)||(40795377-40795413)
[»] chr5 (33 HSPs)
chr5 (23-77)||(32283573-32283627)
chr5 (23-74)||(31561357-31561408)
chr5 (23-73)||(42515805-42515854)
chr5 (35-77)||(4573084-4573126)
chr5 (24-74)||(8839452-8839502)
chr5 (35-76)||(13864339-13864380)
chr5 (35-76)||(17046329-17046370)
chr5 (37-77)||(29178441-29178481)
chr5 (23-74)||(2249430-2249480)
chr5 (23-74)||(22555228-22555278)
chr5 (32-79)||(25928906-25928953)
chr5 (35-74)||(38534657-38534696)
chr5 (27-74)||(40782565-40782612)
chr5 (24-74)||(11637587-11637636)
chr5 (23-73)||(21212067-21212117)
chr5 (35-77)||(26034633-26034675)
chr5 (35-77)||(31877922-31877964)
chr5 (36-74)||(33369439-33369477)
chr5 (35-77)||(40027789-40027831)
chr5 (35-73)||(41650964-41651002)
chr5 (23-60)||(5150096-5150133)
chr5 (24-73)||(6025306-6025355)
chr5 (37-74)||(13880193-13880230)
chr5 (35-68)||(20721053-20721086)
chr5 (24-77)||(23118066-23118118)
chr5 (23-72)||(26409252-26409300)
chr5 (35-72)||(41872253-41872290)
chr5 (37-73)||(10032301-10032337)
chr5 (22-58)||(12190005-12190040)
chr5 (35-71)||(14188360-14188396)
chr5 (35-83)||(16089438-16089486)
chr5 (35-71)||(20927639-20927675)
chr5 (22-74)||(33645702-33645753)
[»] chr4 (21 HSPs)
chr4 (27-82)||(10399241-10399296)
chr4 (24-74)||(38340335-38340384)
chr4 (23-77)||(50380850-50380903)
chr4 (23-74)||(24885814-24885864)
chr4 (25-72)||(51465336-51465382)
chr4 (27-73)||(13964077-13964123)
chr4 (35-73)||(44221445-44221483)
chr4 (24-66)||(46853867-46853909)
chr4 (23-76)||(6459938-6459990)
chr4 (24-77)||(32923245-32923297)
chr4 (24-73)||(50668338-50668386)
chr4 (26-70)||(8415512-8415555)
chr4 (23-74)||(40160795-40160845)
chr4 (35-74)||(43034367-43034406)
chr4 (23-74)||(43722762-43722812)
chr4 (25-74)||(2448146-2448194)
chr4 (23-60)||(10564479-10564515)
chr4 (37-74)||(19283969-19284006)
chr4 (35-72)||(43539814-43539851)
chr4 (24-72)||(30780128-30780175)
chr4 (23-71)||(51458678-51458725)
[»] chr2 (18 HSPs)
chr2 (25-74)||(8761580-8761628)
chr2 (24-79)||(11817360-11817415)
chr2 (31-74)||(14414916-14414959)
chr2 (23-77)||(19976147-19976201)
chr2 (23-80)||(29798531-29798587)
chr2 (37-77)||(42714433-42714473)
chr2 (35-74)||(2256968-2257007)
chr2 (23-70)||(10991543-10991589)
chr2 (35-74)||(22523037-22523076)
chr2 (23-74)||(25625713-25625763)
chr2 (35-74)||(34977201-34977240)
chr2 (35-74)||(36171525-36171564)
chr2 (35-77)||(2661073-2661115)
chr2 (35-77)||(44496725-44496767)
chr2 (23-72)||(7052772-7052821)
chr2 (35-76)||(31815912-31815953)
chr2 (23-72)||(37265183-37265231)
chr2 (24-72)||(2429015-2429062)
[»] chr7 (19 HSPs)
chr7 (23-71)||(34722034-34722082)
chr7 (23-74)||(20243252-20243303)
chr7 (22-73)||(46220964-46221013)
chr7 (35-74)||(8883550-8883589)
chr7 (23-74)||(24839485-24839535)
chr7 (23-74)||(34448624-34448674)
chr7 (23-62)||(36343549-36343588)
chr7 (23-74)||(38025132-38025183)
chr7 (35-77)||(429203-429245)
chr7 (24-74)||(4227543-4227592)
chr7 (23-77)||(7994898-7994951)
chr7 (24-74)||(38728205-38728255)
chr7 (37-74)||(21993179-21993216)
chr7 (35-76)||(28012639-28012680)
chr7 (27-71)||(2450580-2450623)
chr7 (35-75)||(8879772-8879812)
chr7 (35-75)||(21164783-21164823)
chr7 (35-71)||(22991416-22991452)
chr7 (22-74)||(48065199-48065250)
[»] scaffold0009 (1 HSPs)
scaffold0009 (23-74)||(189604-189655)
[»] chr6 (11 HSPs)
chr6 (23-74)||(34828303-34828354)
chr6 (37-83)||(2108713-2108759)
chr6 (23-74)||(16890462-16890512)
chr6 (23-74)||(4379496-4379549)
chr6 (24-74)||(23507406-23507455)
chr6 (37-74)||(5271390-5271427)
chr6 (35-71)||(361754-361790)
chr6 (26-74)||(9311947-9311994)
chr6 (22-74)||(11456388-11456439)
chr6 (23-71)||(14296971-14297018)
chr6 (34-74)||(28987874-28987913)
[»] scaffold0015 (1 HSPs)
scaffold0015 (23-73)||(75181-75231)
[»] scaffold0458 (1 HSPs)
scaffold0458 (23-74)||(11165-11216)
[»] scaffold0328 (1 HSPs)
scaffold0328 (23-78)||(6972-7027)
[»] scaffold0118 (1 HSPs)
scaffold0118 (35-74)||(45409-45448)
[»] scaffold0238 (1 HSPs)
scaffold0238 (35-72)||(4800-4837)
[»] scaffold0070 (1 HSPs)
scaffold0070 (36-77)||(41919-41960)
[»] scaffold0011 (1 HSPs)
scaffold0011 (37-74)||(223155-223192)
[»] scaffold0007 (1 HSPs)
scaffold0007 (24-73)||(244477-244526)
[»] scaffold0743 (1 HSPs)
scaffold0743 (30-74)||(1439-1483)


Alignment Details
Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 28053252 - 28053308
Alignment:
Q  21 tcgaccttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28053252 tcgaccttacatattattatgcattgtccataccaactgaattaagctcacgagaac 28053308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 29450996 - 29451049
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  29450996 accttgcatattattatgcattgtccataccaactgagttaagctcacgagaac 29451049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 15892845 - 15892792
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaa 76  Q
    ||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||    
T  15892845 gaccttacatatttttatgcattgttcataccaactgaactaagctcacgagaa 15892792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 30895368 - 30895328
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  30895368 ttatgtattgtccataccaactgagttaagctcacgagaac 30895328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 24752661 - 24752712
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||| |||||||||||| ||||||||||||||||||  ||||||||||||    
T  24752661 gaccttgcatattattatgcattgtccataccaactgagctaagctcacgag 24752712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 30003237 - 30003194
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaacg 78  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||    
T  30003237 tattatgcattgtccataccaactgaattaagctcacgataacg 30003194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 48646739 - 48646789
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    |||||| |||||||||||| ||||||||||| |||||| ||||||||||||    
T  48646739 gaccttgcatattattatgcattgtccatacaaactgagttaagctcacga 48646789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 2636782 - 2636822
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  2636782 ttatgcattgtccataccaactgagttaagctcacgagaac 2636822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 11410674 - 11410627
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  11410674 gaccttacatatt-ttatgtattgttcataccaactgagttaagctcac 11410627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 14907048 - 14907100
Alignment:
Q  22 cgaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||||||||||  ||||| |||||||| ||| |||||||||||||    
T  14907048 cgaccttacatattattatacattgttcataccaattgagttaagctcacgag 14907100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 6219876 - 6219926
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||||||||||| ||||||| || |||||||||||||    
T  6219876 gaccttacatat-attatgtattgtccctaccaaccgagttaagctcacgag 6219926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 11702013 - 11701963
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||| ||||| |||||||  |||||||||||||||||||||||    
T  11702013 gaccttacatatt-ttatgcattgtcccaaccaactgaattaagctcacgag 11701963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 18398674 - 18398635
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  18398674 tattatgtattgtccttaccaactgaattaaactcacgag 18398635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 23309504 - 23309461
Alignment:
Q  31 atattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||    
T  23309504 atattattatgcattgtctataccaactgaactaagctcacgag 23309461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 25533009 - 25532970
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  25533009 tattatgcattgtccataccaactgaactaagctcacgag 25532970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 27172747 - 27172786
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  27172747 tattatgttttgtccataccaactgagttaagctcacgag 27172786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 2613768 - 2613719
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||||||    
T  2613768 accttacatatt-ttatgcattgtccataccaactgagctaagctcacgag 2613719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 7652148 - 7652111
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaa 61  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  7652148 gaccttacatat-attatgtattgtccataccaactgaa 7652111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 10356208 - 10356246
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacga 73  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  10356208 tattatgcattgtccataccaactgagttaagctcacga 10356246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 30678828 - 30678877
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||| |||||| ||||||| |||||||||| |||||||||||||    
T  30678828 accttacatat-attatgcattgtccctaccaactgagttaagctcacgag 30678877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 40268256 - 40268207
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||| |||||||| ||||||||||||||||  ||||||||||||    
T  40268256 accttacatat-attatgtactgtccataccaactgagctaagctcacgag 40268207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 50849088 - 50849141
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgagaacg 78  Q
    ||||||||||| |||||| ||||||  |||||||||| |||||||||||||||||    
T  50849088 accttacatat-attatgcattgtcattaccaactgagttaagctcacgagaacg 50849141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 51046188 - 51046139
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||    
T  51046188 accttacatatt-ttatgtattgttcataccaactgagttaaactcacgag 51046139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 72
Target Start/End: Original strand, 16580832 - 16580861
Alignment:
Q  43 attgtccataccaactgaattaagctcacg 72  Q
    ||||||||||||||||||||||||||||||    
T  16580832 attgtccataccaactgaattaagctcacg 16580861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 43611470 - 43611422
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    ||||||||||| |||||||||||||||||||||||||  ||| |||||||    
T  43611470 accttacatat-attatgtattgtccataccaactgagctaaactcacga 43611422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 14125389 - 14125357
Alignment:
Q  23 gaccttacatattattatgtattgtccatacca 55  Q
    |||||||||||||||||| ||||||||||||||    
T  14125389 gaccttacatattattatatattgtccatacca 14125357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 16067150 - 16067190
Alignment:
Q  35 tattatgtatt-gtccataccaactgaattaagctcacgag 74  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  16067150 tattatgtatttgtccataccaactgacttaagctcacgag 16067190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 29800581 - 29800526
Alignment:
Q  22 cgaccttacatattattatgtattgtccataccaactgaattaagctcacgagaacg 78  Q
    ||||||| |||||| ||||| ||| ||| |||||||||| |||||||||||||||||    
T  29800581 cgaccttgcatatt-ttatgcattatccttaccaactgagttaagctcacgagaacg 29800526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 47692933 - 47692969
Alignment:
Q  38 tatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||| |||||||||||||||||| |||||||||||||    
T  47692933 tatgcattgtccataccaactgagttaagctcacgag 47692969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 25874178 - 25874121
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaacgga 80  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  25874178 gaccttacatattattatgcattgtccataccaactgagttaagctcacgagtacgga 25874121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 27532882 - 27532834
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcac 71  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  27532882 gaccttgcatattattatgtattgtccataccaactgagttaagttcac 27532834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 1744015 - 1744054
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  1744015 tattatgtattgtccataccaactgaattaagttcacgag 1744054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 2186441 - 2186491
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  2186441 gaccttacatat-attatgtattgtccataccaactgagttaagttcacgag 2186491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 47313386 - 47313437
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgaga 75  Q
    ||||| |||||||||||| ||||||||||||||||||  |||||||||||||    
T  47313386 accttgcatattattatgcattgtccataccaactgagctaagctcacgaga 47313437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 34326008 - 34326050
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  34326008 tattatgcattgtccataccaactgaattaagttcacgagaac 34326050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 5030249 - 5030202
Alignment:
Q  27 ttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||||| ||||| ||||||||||||| ||| ||||||||    
T  5030249 ttacatattattatgcattgttcataccaactgaactaaactcacgag 5030202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 7464505 - 7464555
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||| ||||||| |||||||||| |||||||||||||    
T  7464505 gaccttacatat-attatgcattgtccctaccaactgagttaagctcacgag 7464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 28808172 - 28808211
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  28808172 tattatgtattatctataccaactgaattaagctcacgag 28808211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 38108471 - 38108521
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgaga 75  Q
    |||||||||||| ||||||||| |||||||||||| || |||||||||||||    
T  38108471 accttacatatt-ttatgtattatccataccaactaaactaagctcacgaga 38108521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 46903955 - 46903905
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||| |||||||||||||||||| |||| ||||||||    
T  46903955 gaccttacatat-attatgcattgtccataccaactgagttaatctcacgag 46903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 7557560 - 7557598
Alignment:
Q  36 attatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  7557560 attatgcattgtccataccaactgagttaagctcacgag 7557598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 10843806 - 10843848
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||| | |||||||||||| ||||||||||||||||    
T  10843806 tattatgtattattcataccaactgagttaagctcacgagaac 10843848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 32909315 - 32909368
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    |||||| |||||| ||||| ||||||||||| |||||| ||||||||||||||||    
T  32909315 gaccttgcatatt-ttatgcattgtccatactaactgagttaagctcacgagaac 32909368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 50387581 - 50387615
Alignment:
Q  31 atattattatgtattgtccataccaactgaattaa 65  Q
    ||||||||||||||||||| |||||||||||||||    
T  50387581 atattattatgtattgtccttaccaactgaattaa 50387615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 5117254 - 5117202
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||| |||||||||||||| || |||||||  |||||||||||||||    
T  5117254 accttacatat-attatgtattgtccttatcaactgagctaagctcacgagaac 5117202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 28093390 - 28093353
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacg 72  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  28093390 tattatgcattgtccataccaactgaattaaactcacg 28093353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 46337244 - 46337296
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaa 76  Q
    ||||||||||||| ||||||||||| |||||| | ||| |||||||||||||||    
T  46337244 gaccttacatatt-ttatgtattgttcataccgattgagttaagctcacgagaa 46337296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 51047183 - 51047232
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacg 72  Q
    ||||||||||||||||||  |||||||||||||||| |  ||||||||||    
T  51047183 gaccttacatattattatacattgtccataccaactaaggtaagctcacg 51047232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 51882225 - 51882262
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacg 72  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  51882225 tattatgcattgtccataccaactgagttaagctcacg 51882262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 14827559 - 14827519
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  14827559 ttatgcattgtccataccaactgagctaagctcacgagaac 14827519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 19468487 - 19468451
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  19468487 tattatgcattgtccataccaactgagttaagctcac 19468451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 27185513 - 27185473
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgaga 75  Q
    ||||||||||||||| ||||||||||  |||||||||||||    
T  27185513 tattatgtattgtccctaccaactgagctaagctcacgaga 27185473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 38130984 - 38131020
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  38130984 tattatgcattgtccataccaactgagttaagctcac 38131020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 40862223 - 40862167
Alignment:
Q  19 gttcgaccttacatattattatgtattgtccataccaactgaattaagctcacgaga 75  Q
    ||||||||||||||||||||||  ||||| |||| |||||||  |||| ||||||||    
T  40862223 gttcgaccttacatattattatacattgttcataacaactgagctaagttcacgaga 40862167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 2958469 - 2958419
Alignment:
Q  27 ttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  2958469 ttacatattattatgcattgtccataccaactgaactaagctcacgagaac 2958419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 9663066 - 9663104
Alignment:
Q  22 cgaccttacatattattatgtattgtccataccaactga 60  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9663066 cgaccttacatattattatgcattgtccataccaactga 9663104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 1135408 - 1135461
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    |||||||||||||||||| ||||| ||||| |||||| ||||||||||| ||||    
T  1135408 accttacatattattatgcattgttcatacaaactgagttaagctcacgtgaac 1135461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 10601799 - 10601762
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacg 72  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  10601799 tattatgcattgtccataccaactgaattaagctcacg 10601762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 13357466 - 13357505
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  13357466 tattatgcattgtccataccaactgagttaagctcacgag 13357505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 13577124 - 13577077
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctca 70  Q
    |||||| ||||| |||||| |||||||||||||||||| |||||||||    
T  13577124 gaccttgcatatgattatgcattgtccataccaactgagttaagctca 13577077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 16823199 - 16823249
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| ||||||||| ||| ||||||||||| |||||||||||||    
T  16823199 gaccttacatat-attatgtatagtctataccaactgagttaagctcacgag 16823249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 20701508 - 20701473
Alignment:
Q  32 tattattatgtattgtccataccaactgaattaagc 67  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20701508 tattattatgtattgtccataccaactgagttaagc 20701473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 21557480 - 21557430
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||| ||||||||||| |||||| |||||||||||||    
T  21557480 gaccttacatat-attatgcattgtccatactaactgagttaagctcacgag 21557430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 33373766 - 33373816
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||| |||||||||||||||||| ||||| |||||||    
T  33373766 gaccttacatat-attatgaattgtccataccaactgagttaaggtcacgag 33373816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 43919655 - 43919606
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  43919655 gaccttacatat-atcatgtattgtcca-accaactgaattaagctcacgag 43919606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 10982762 - 10982724
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacga 73  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  10982762 tattatatattgtccataccaactgagttaagctcacga 10982724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 12800925 - 12800955
Alignment:
Q  35 tattatgtattgtccataccaactgaattaa 65  Q
    |||||||||||||||||||||||||||||||    
T  12800925 tattatgtattgtccataccaactgaattaa 12800955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 13004199 - 13004158
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgagaacg 78  Q
    ||||| |||||||||||||||||| |||||||||||| ||||    
T  13004199 ttatgcattgtccataccaactgagttaagctcacgaaaacg 13004158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 38232919 - 38232971
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    |||||||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  38232919 accttacatatt-ttatgcattgtcaataccaaccgaattaatctcacgagaac 38232971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 17898115 - 17898079
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  17898115 tattatgttttgtccataccaactgagttaagctcac 17898079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 24202187 - 24202143
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaacgg 79  Q
    |||||||||||||  ||||||||||||||||| | ||||||||||    
T  24202187 tattatgtattgtttataccaactgaattaagtttacgagaacgg 24202143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 32421605 - 32421569
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  32421605 tattatatattgtccataccaactgagttaagctcac 32421569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 40795413 - 40795377
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  40795413 tattatgtattgttcataccaactgagttaagctcac 40795377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 32283627 - 32283573
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  32283627 gaccttacatattattatgcattgtccataccaactgagctaagctcacgagaac 32283573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 31561357 - 31561408
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  31561357 gaccttgcatattattatgcattgtccataccaactgagttaagctcacgag 31561408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 42515854 - 42515805
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  42515854 gaccttacatat-attatgcattgtccataccaactgaattaagctcacga 42515805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 4573084 - 4573126
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  4573084 tattatgcattgtccataccaactgaactaagctcacgagaac 4573126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 8839502 - 8839452
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||||||||| |||||| |||||||||||| | ||||||||||    
T  8839502 accttacatattattatgcattgtctataccaactgaacttagctcacgag 8839452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 13864380 - 13864339
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaa 76  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  13864380 tattatgtattgttcataccaactgagttaagctcacgagaa 13864339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 17046370 - 17046329
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaa 76  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  17046370 tattatgcattgtccataccaactgagttaagctcacgagaa 17046329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 29178481 - 29178441
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  29178481 ttatgcattgtccataccaactgagttaagctcacgagaac 29178441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 2249430 - 2249480
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||||||||||| ||| |||||| |||||||||||||    
T  2249430 gaccttacatat-attatgtattgtccttactaactgagttaagctcacgag 2249480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 22555278 - 22555228
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||| |||||||| ||| |||||||||||||||||| |||||||||||||    
T  22555278 gaccttgcatattat-atgcattgtccataccaactgagttaagctcacgag 22555228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 25928953 - 25928906
Alignment:
Q  32 tattattatgtattgtccataccaactgaattaagctcacgagaacgg 79  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||| ||||    
T  25928953 tattattatgtattgtccatatcaattgagttaagctcacgaggacgg 25928906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 38534696 - 38534657
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  38534696 tattatgtattgtccataccaattgagttaagctcacgag 38534657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 40782565 - 40782612
Alignment:
Q  27 ttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||||| ||||||||||| |||||| |||| ||||||||    
T  40782565 ttacatattattatgcattgtccatacaaactgagttaaactcacgag 40782612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 11637587 - 11637636
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||| |||||| ||||| |||||||||||||||||| |||||||||||||    
T  11637587 accttgcatatt-ttatgcattgtccataccaactgagttaagctcacgag 11637636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 21212067 - 21212117
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    |||||| ||||| ||||||||||||||||| ||||| | ||||||||||||    
T  21212067 gaccttgcatataattatgtattgtccatatcaactaagttaagctcacga 21212117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 26034633 - 26034675
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||    
T  26034633 tattatgcattgttcataccaactgagttaagctcacgagaac 26034675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 31877964 - 31877922
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||    
T  31877964 tattatgcattgtccataccaagtgagttaagctcacgagaac 31877922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 33369439 - 33369477
Alignment:
Q  36 attatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  33369439 attatgtattgttcataccaactgagttaagctcacgag 33369477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 40027789 - 40027831
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||    
T  40027789 tattatgcattgtccatgccaactgagttaagctcacgagaac 40027831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 41650964 - 41651002
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacga 73  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  41650964 tattatgcattgtccataccaactgagttaagctcacga 41651002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 5150096 - 5150133
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactga 60  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  5150096 gaccttacatattattatgcattgtccatactaactga 5150133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 6025355 - 6025306
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    |||||||||||| ||||| ||||||||||| ||||||| ||| |||||||    
T  6025355 accttacatatttttatgcattgtccatactaactgaactaaactcacga 6025306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 13880230 - 13880193
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  13880230 ttatgtattgtccatatcaactgaactaagctcacgag 13880193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 20721086 - 20721053
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagct 68  Q
    |||||||||||||||||||||||||| |||||||    
T  20721086 tattatgtattgtccataccaactgagttaagct 20721053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 23118066 - 23118118
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||| |||||| ||||||| || ||||||| ||||||||||||||||    
T  23118066 accttacatat-attatgcattgtccttatcaactgagttaagctcacgagaac 23118118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 26409300 - 26409252
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacg 72  Q
    |||||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  26409300 gaccttacatat-attatgcattgtccataccaactgagctaagctcacg 26409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 41872290 - 41872253
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacg 72  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  41872290 tattatgtattgtccatgccaactgagttaagctcacg 41872253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 10032301 - 10032337
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacga 73  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  10032301 ttatgcattgtccataccaactgagttaagctcacga 10032337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 12190040 - 12190005
Alignment:
Q  22 cgaccttacatattattatgtattgtccataccaact 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12190040 cgaccttacatat-attatgtattgtccataccaact 12190005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 14188360 - 14188396
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  14188360 tattatggattgtccataccaactgaactaagctcac 14188396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 16089486 - 16089438
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaacggaaaa 83  Q
    ||||||| ||||||||||||||||||| |||||| ||||| ||| ||||    
T  16089486 tattatgcattgtccataccaactgaactaagcttacgaggacgtaaaa 16089438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 20927675 - 20927639
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||||||||||||||||||||||  |||||||||    
T  20927675 tattatgtattgtccataccaactgagctaagctcac 20927639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 33645702 - 33645753
Alignment:
Q  22 cgaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||| ||||| |||||  |||||||||||||||||| |||||||||||||    
T  33645702 cgaccttgcatat-attatacattgtccataccaactgagttaagctcacgag 33645753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 10399296 - 10399241
Alignment:
Q  27 ttacatattattatgtattgtccataccaactgaattaagctcacgagaacggaaa 82  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||    
T  10399296 ttacatattattatgtattgttcataccaattgaattaaactcacgaggacggaaa 10399241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 38340335 - 38340384
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  38340335 accttacatatt-ttatgtattgtccataccaactgagttaagctcacgag 38340384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 50380850 - 50380903
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  50380850 gaccttacatat-attatgcattgttcataccaactgaattaagctcacgagaac 50380903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 24885814 - 24885864
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  24885814 gaccttgcatatt-ttatgtattgtccataccaactgagttaagctcacgag 24885864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 51465382 - 51465336
Alignment:
Q  25 ccttacatattattatgtattgtccataccaactgaattaagctcacg 72  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  51465382 ccttacatat-attatgcattgtccataccaactgaattaagctcacg 51465336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 13964077 - 13964123
Alignment:
Q  27 ttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    ||||||||||||||| |||||||||||||||| || |||||||||||    
T  13964077 ttacatattattatgcattgtccataccaacttaactaagctcacga 13964123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 44221483 - 44221445
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacga 73  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  44221483 tattatgcattgtccataccaactgaattaagctcacga 44221445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 46853909 - 46853867
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaag 66  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  46853909 accttgcatattattatgtattgtccataccaactgagttaag 46853867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 6459938 - 6459990
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaa 76  Q
    |||||||||||| |||||| |||||||||| ||||||| |||||||||||||||    
T  6459938 gaccttacatat-attatgcattgtccatatcaactgagttaagctcacgagaa 6459990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 32923245 - 32923297
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||    
T  32923245 accttacatat-attatgcattgttcataccaactgagttaagctcacgagaac 32923297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 50668386 - 50668338
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  50668386 accttacatat-attatgtattgttcataccaactgaattaagttcacga 50668338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 8415512 - 8415555
Alignment:
Q  26 cttacatattattatgtattgtccataccaactgaattaagctca 70  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  8415512 cttacatat-attatgcattgtccataccaactgaattaagctca 8415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 40160845 - 40160795
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  40160845 gaccttacatat-attatgcgttgtctataccaactgaattaagctcacgag 40160795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 43034367 - 43034406
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  43034367 tattatgcattgtccataccaactgagttaagctcacgag 43034406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 43722812 - 43722762
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||| |||||||||||||||||| |||| ||||||||    
T  43722812 gaccttacatat-attatgcattgtccataccaactgagttaaactcacgag 43722762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 2448194 - 2448146
Alignment:
Q  25 ccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||| ||||||||||| ||||||||||||| |||| |||||||    
T  2448194 ccttacatatt-ttatgtattgttcataccaactgaactaagttcacgag 2448146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 10564479 - 10564515
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactga 60  Q
    |||||||||||| |||||||||||||||||||||||||    
T  10564479 gaccttacatat-attatgtattgtccataccaactga 10564515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 19283969 - 19284006
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||  |||||||||||||||||||||||||    
T  19283969 ttatgtattgtttataccaactgaattaagctcacgag 19284006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 43539851 - 43539814
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacg 72  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  43539851 tattatgtattgtccctaccaactgaactaagctcacg 43539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 30780175 - 30780128
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacg 72  Q
    |||||| ||||| ||||| |||||||||||||||||| |||||||||||    
T  30780175 accttatatatt-ttatgcattgtccataccaactgagttaagctcacg 30780128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 51458725 - 51458678
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcac 71  Q
    |||||| |||||| ||||||||||||||||||||||||  |||||||||    
T  51458725 gaccttgcatatt-ttatgtattgtccataccaactgagctaagctcac 51458678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 8761580 - 8761628
Alignment:
Q  25 ccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  8761580 ccttacatat-attatgtattgtccataccaactgagttaagctcacgag 8761628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 11817360 - 11817415
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgagaacgg 79  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||| ||| ||||    
T  11817360 accttacatattattatacattgtccataccaactgagttaagctcatgaggacgg 11817415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 14414916 - 14414959
Alignment:
Q  31 atattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||| |||||||||||||||||| |||||||||||||    
T  14414916 atattattatgcattgtccataccaactgagttaagctcacgag 14414959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 19976201 - 19976147
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    |||||| |||||||||||| ||||||||||||||||||  ||| |||||||||||    
T  19976201 gaccttgcatattattatgcattgtccataccaactgagctaaactcacgagaac 19976147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 29798531 - 29798587
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaacgga 80  Q
    ||||||| ||||| ||||| |||||||||||||||||| ||||||||||||| |||||    
T  29798531 gaccttaaatatt-ttatgcattgtccataccaactgagttaagctcacgaggacgga 29798587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 42714473 - 42714433
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  42714473 ttatgcattgtccataccaactgaactaagctcacgagaac 42714433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 2257007 - 2256968
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  2257007 tattatgcattgtccataccaactgagttaagctcacgag 2256968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 10991589 - 10991543
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctca 70  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||    
T  10991589 gaccttacatat-attatgtattgtccttaccaactgagttaagctca 10991543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 22523037 - 22523076
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  22523037 tattatgtattgtccataccaactgagctaagctcacgag 22523076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 25625763 - 25625713
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||| ||||||||||| |||||| |||||||||||||    
T  25625763 gaccttacatat-attatgaattgtccatacaaactgatttaagctcacgag 25625713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 34977240 - 34977201
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  34977240 tattatgcattgtccataccaactgagttaagctcacgag 34977201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 36171564 - 36171525
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  36171564 tattatgtattgtccctaccaactgagttaagctcacgag 36171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 2661073 - 2661115
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||    
T  2661073 tattatgcattgtccttaccaactgagttaagctcacgagaac 2661115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 44496725 - 44496767
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||||||| ||||||||||  |||||||||||||||    
T  44496725 tattatgtattgtccttaccaactgagctaagctcacgagaac 44496767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 7052821 - 7052772
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacg 72  Q
    |||||| |||||||||||| ||||||| ||||||||||  ||||||||||    
T  7052821 gaccttgcatattattatgcattgtccttaccaactgagctaagctcacg 7052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 31815912 - 31815953
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaa 76  Q
    ||||||| ||||||| |||||||||| |||||||||||||||    
T  31815912 tattatgcattgtccctaccaactgagttaagctcacgagaa 31815953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 37265183 - 37265231
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacg 72  Q
    ||||||||||||| ||||||||||||| || ||||||||||||| |||||    
T  37265183 gaccttacatatt-ttatgtattgtccttatcaactgaattaagttcacg 37265231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 2429062 - 2429015
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacg 72  Q
    ||||||||||| |||||| ||||||| ||||||||||| ||||||||||    
T  2429062 accttacatat-attatgcattgtccttaccaactgaactaagctcacg 2429015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 34722034 - 34722082
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  34722034 gaccttacatattattatgcattgttcataccaactgagttaagctcac 34722082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 20243303 - 20243252
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||| |||||||||||| ||||||||||||||||||  ||||||||||||    
T  20243303 gaccttgcatattattatgcattgtccataccaactgagctaagctcacgag 20243252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 46220964 - 46221013
Alignment:
Q  22 cgaccttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    ||||||||||||||  |||| |||||||||||||||||| ||||||||||||    
T  46220964 cgaccttacatatt--tatgcattgtccataccaactgagttaagctcacga 46221013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 8883589 - 8883550
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  8883589 tattatgcattgtccataccaactgagttaagctcacgag 8883550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 24839535 - 24839485
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||| ||||| |||||| ||||||||||| |||||||||||||    
T  24839535 gaccttacatatt-ttatgcattgtctataccaactgagttaagctcacgag 24839485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 34448624 - 34448674
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||| |||||||| ||||||||| |||||||||||||    
T  34448624 gaccttacatat-attatgcattgtccaaaccaactgagttaagctcacgag 34448674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 36343549 - 36343588
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaat 62  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  36343549 gaccttgcatattattatgcattgtccataccaactgaat 36343588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 38025132 - 38025183
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||| ||||  ||| |||||||||||||| |||||||||||||    
T  38025132 gaccttacatatttttattcattatccataccaactgagttaagctcacgag 38025183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 429203 - 429245
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||    
T  429203 tattatgtattatccatatcaactgagttaagctcacgagaac 429245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 4227543 - 4227592
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||| || ||||| |||||||||||||||||| |||||||||||||    
T  4227543 accttacatgtt-ttatgcattgtccataccaactgagttaagctcacgag 4227592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 7994898 - 7994951
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    |||||||||||| ||||||| |||||| |||||||||| ||| ||||||||||||    
T  7994898 gaccttacatat-attatgttttgtccctaccaactgagttatgctcacgagaac 7994951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 38728255 - 38728205
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||| |||||| ||||| ||||||||||||||||||  ||||||||||||    
T  38728255 accttgcatatttttatgcattgtccataccaactgagctaagctcacgag 38728205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 21993216 - 21993179
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  21993216 ttatgcattgtccataccaactgagttaagctcacgag 21993179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 28012639 - 28012680
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgagaa 76  Q
    ||||||| ||||||| |||||||||| |||||||||||||||    
T  28012639 tattatgcattgtccttaccaactgagttaagctcacgagaa 28012680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 2450623 - 2450580
Alignment:
Q  27 ttacatattattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  2450623 ttacatatt-ttatgtattgttcataccaactgagttaagctcac 2450580  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 8879772 - 8879812
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgaga 75  Q
    ||||||| |||||| ||||||||||| ||||||||||||||    
T  8879772 tattatgcattgtctataccaactgagttaagctcacgaga 8879812  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 21164783 - 21164823
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgaga 75  Q
    ||||||| ||| |||||||||||||| ||||||||||||||    
T  21164783 tattatgcattatccataccaactgagttaagctcacgaga 21164823  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 22991416 - 22991452
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  22991416 tattatgcattgtccataccaactgagttaagctcac 22991452  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 48065250 - 48065199
Alignment:
Q  22 cgaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||| ||||| |||||| |||||||||||||| ||| |||||||||||||    
T  48065250 cgaccttgcatat-attatgaattgtccataccaattgagttaagctcacgag 48065199  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 189604 - 189655
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||| |||||||||||| |||||||||||||||||| ||||| |||||||    
T  189604 gaccttgcatattattatgcattgtccataccaactgagttaagttcacgag 189655  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 34828354 - 34828303
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||||||||| ||||||||||||||||||  ||| ||||||||    
T  34828354 gaccttacatattattatgcattgtccataccaactgagctaaactcacgag 34828303  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 2108759 - 2108713
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgagaacggaaaa 83  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||    
T  2108759 ttatgcattgtccataccaactgagttaagctcacgagaacagaaaa 2108713  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 16890462 - 16890512
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||| ||||| |||||||||||||||| | |||||||||||||    
T  16890462 gaccttacatatt-ttatgcattgtccataccaactaagttaagctcacgag 16890512  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 4379496 - 4379549
Alignment:
Q  23 gaccttacatat--tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||  ||||||||||||| | |||||||||| |||||||||||||    
T  4379496 gaccttacatataatattatgtattgttcctaccaactgagttaagctcacgag 4379549  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 23507406 - 23507455
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| ||||||||||||| ||||||||||| |||| |||||||    
T  23507406 accttacatatt-ttatgtattgtccttaccaactgaactaagttcacgag 23507455  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 5271427 - 5271390
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  5271427 ttatgtattgtccataccaactgagttaagttcacgag 5271390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 361790 - 361754
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  361790 tattatgcattgtccataccaactgagttaagctcac 361754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 9311947 - 9311994
Alignment:
Q  26 cttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||| |||||||||| | |||||||||||| |||||||||||||    
T  9311947 cttacatat-attatgtattattcataccaactgagttaagctcacgag 9311994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 11456388 - 11456439
Alignment:
Q  22 cgaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||| |||||| |||||||||||||||||  |||| ||||||||    
T  11456388 cgaccttacatat-attatgcattgtccataccaactgttttaaactcacgag 11456439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 14296971 - 14297018
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcac 71  Q
    ||||||||||||| |||||||||||||||||||||| |  |||||||||    
T  14296971 gaccttacatatt-ttatgtattgtccataccaactcagctaagctcac 14297018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 28987913 - 28987874
Alignment:
Q  34 ttattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  28987913 ttattatgtattgtcc-taccaactgagttaagctcacgag 28987874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 75231 - 75181
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    |||||| |||||||||||| ||| |||||||||||||| ||||||||||||    
T  75231 gaccttgcatattattatgcattatccataccaactgagttaagctcacga 75181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 11165 - 11216
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||| |||||| ||||| ||||||||||||||||||  ||||||||||||    
T  11165 gaccttgcatatttttatgcattgtccataccaactgatctaagctcacgag 11216  T

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Target: scaffold0328 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 7027 - 6972
Alignment:
Q  23 gaccttacatattattatgtattgtccataccaactgaattaagctcacgagaacg 78  Q
    ||||||||||||||||||| ||||||||||||||| || | || |||||| |||||    
T  7027 gaccttacatattattatgcattgtccataccaaccgagtcaaactcacgtgaacg 6972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 45448 - 45409
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  45448 tattatgtattgtccaaaccaactgagttaagctcacgag 45409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 4800 - 4837
Alignment:
Q  35 tattatgtattgtccataccaactgaattaagctcacg 72  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  4800 tattatgtattgtcgataccaactgaattaaactcacg 4837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 41960 - 41919
Alignment:
Q  36 attatgtattgtccataccaactgaattaagctcacgagaac 77  Q
    |||||||||||| |||||||| |||||||| |||||||||||    
T  41960 attatgtattgttcataccaattgaattaacctcacgagaac 41919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 223192 - 223155
Alignment:
Q  37 ttatgtattgtccataccaactgaattaagctcacgag 74  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  223192 ttatgtattgtccataccaactgagctaagctcacgag 223155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 244526 - 244477
Alignment:
Q  24 accttacatattattatgtattgtccataccaactgaattaagctcacga 73  Q
    |||||||||||| ||||| |||||||||| |||||||  |||||||||||    
T  244526 accttacatatttttatgcattgtccatatcaactgagctaagctcacga 244477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 1439 - 1483
Alignment:
Q  30 catattattatgtattgtccataccaactgaattaagctcacgag 74  Q
    |||||||||||| |||||||||||||||||   ||||||||||||    
T  1439 catattattatgcattgtccataccaactgtgctaagctcacgag 1483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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