View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20269_high_22 (Length: 205)
Name: NF20269_high_22
Description: NF20269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20269_high_22 |
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Alignment Details
Target: chr6 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 10278951 - 10279126
Alignment:
| Q |
14 |
cataggtgcatataattattacaaagaagtaactccgtatattgttttctcatataattggtccaaaaaagt--atcttccattatatgtgttcagtcag |
111 |
Q |
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| T |
10278951 |
cataggtgcatatagttattacagacaagtaactccatatattgttttctcatataattggtccaaaaaaatgcatcttccaatatatctgttcactca- |
10279049 |
T |
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| Q |
112 |
tcacagtgtcgatatgttcgtacagtttcactgtgaatcataggtccattattgaattaaagattctgacacattcatat |
191 |
Q |
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|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
10279050 |
---cagtttcgatatgttcgtacagtttcggtgtgaatcataggtccattattgaattaaagattctgacactttcatat |
10279126 |
T |
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