View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20269_low_13 (Length: 288)
Name: NF20269_low_13
Description: NF20269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20269_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 24812463 - 24812725
Alignment:
| Q |
19 |
gctttatctgttagaaaacagtgttctgattgtggatagcaaaaactagaagtttgtttaaatttctcgacacaacagcgctatagcgccactataatct |
118 |
Q |
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| T |
24812463 |
gctttatctgttagaaaacagtgttctgattgtggatagcaaaaactagaagtttgtttaaatttctcgacacaacagcgctatagcgccgctataatct |
24812562 |
T |
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| Q |
119 |
ctatttggcaatattttcaaagttatggtatactagtaaatacctttgcaccatttcttcaacaaattgaggaggatgagaacttgcaacagcattgtac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24812563 |
ctatttggcaatattttcaaagttatggtatactagtaaatacctttgcaccatttcttcaacaaattgaggaggatgagaacttgcaacagcattgtac |
24812662 |
T |
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| Q |
219 |
caattgatactgtcacctatcaaaggccaacctctccttcctggtggcaatcttcctatgctt |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24812663 |
caattgatactgtcacctatcaaaggccaacctctccttcctggtggcaatcttcctatgctt |
24812725 |
T |
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