View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20269_low_16 (Length: 260)

Name: NF20269_low_16
Description: NF20269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20269_low_16
NF20269_low_16
[»] chr8 (10 HSPs)
chr8 (14-246)||(10565209-10565438)
chr8 (117-246)||(12787816-12787941)
chr8 (126-246)||(44042514-44042630)
chr8 (118-244)||(20142454-20142576)
chr8 (166-246)||(40464421-40464501)
chr8 (171-237)||(3100168-3100234)
chr8 (161-207)||(24457835-24457881)
chr8 (177-246)||(6904192-6904261)
chr8 (186-246)||(40914584-40914644)
chr8 (166-246)||(43238154-43238234)
[»] chr3 (4 HSPs)
chr3 (164-244)||(29212711-29212791)
chr3 (166-246)||(36494188-36494269)
chr3 (119-160)||(11465720-11465761)
chr3 (166-246)||(21813169-21813249)
[»] chr6 (4 HSPs)
chr6 (118-246)||(10570955-10571079)
chr6 (166-246)||(29988342-29988420)
chr6 (177-227)||(2350296-2350346)
chr6 (187-224)||(1252754-1252791)
[»] chr5 (10 HSPs)
chr5 (162-237)||(11010253-11010328)
chr5 (162-246)||(40944280-40944364)
chr5 (118-234)||(14116478-14116590)
chr5 (118-246)||(248474-248599)
chr5 (117-246)||(42877212-42877337)
chr5 (118-161)||(30327584-30327627)
chr5 (168-237)||(15206517-15206585)
chr5 (166-221)||(43390370-43390425)
chr5 (177-237)||(20721277-20721337)
chr5 (175-231)||(42308060-42308116)
[»] chr1 (12 HSPs)
chr1 (162-246)||(46895941-46896025)
chr1 (161-208)||(9500923-9500970)
chr1 (119-246)||(44584063-44584185)
chr1 (166-246)||(44920231-44920311)
chr1 (166-237)||(18032202-18032273)
chr1 (122-246)||(26533729-26533849)
chr1 (118-246)||(14758528-14758652)
chr1 (166-237)||(18038906-18038977)
chr1 (118-246)||(19547062-19547186)
chr1 (173-224)||(26765974-26766025)
chr1 (118-150)||(38293977-38294009)
chr1 (118-154)||(45925461-45925497)
[»] scaffold0172 (1 HSPs)
scaffold0172 (166-237)||(13478-13549)
[»] chr7 (8 HSPs)
chr7 (118-244)||(44319870-44319992)
chr7 (166-244)||(3298231-3298309)
chr7 (173-221)||(4507909-4507957)
chr7 (166-237)||(5495992-5496063)
chr7 (166-208)||(24557747-24557789)
chr7 (166-244)||(41898267-41898345)
chr7 (186-231)||(27156877-27156922)
chr7 (120-206)||(43211011-43211093)
[»] scaffold0009 (1 HSPs)
scaffold0009 (173-235)||(25582-25644)
[»] chr4 (10 HSPs)
chr4 (117-227)||(43809118-43809223)
chr4 (122-227)||(49011915-49012016)
chr4 (166-246)||(7388788-7388868)
chr4 (117-246)||(19652601-19652726)
chr4 (177-237)||(40781432-40781492)
chr4 (166-234)||(46506338-46506408)
chr4 (123-213)||(38682631-38682717)
chr4 (117-158)||(49360012-49360053)
chr4 (118-154)||(14452233-14452269)
chr4 (166-246)||(38949072-38949152)
[»] chr2 (7 HSPs)
chr2 (166-246)||(11580434-11580514)
chr2 (166-224)||(11252723-11252781)
chr2 (118-233)||(27921859-27921971)
chr2 (168-231)||(36260442-36260505)
chr2 (166-244)||(33962958-33963036)
chr2 (166-246)||(18734365-18734445)
chr2 (166-246)||(32770783-32770863)


Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 10565209 - 10565438
Alignment:
Q  14 gaaccaaaaggagctatggtcagccttccctataatgtcatgcattggagaatttactccctcaacgagaagttctttaacttctcaagtaattattttg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  10565209 gaaccaaaaggagctatggtcagccttccctataatgtcatgcattggagaatttactccctcgacaagaagttctttaacttgtcaagtaattattttg 10565308  T
Q  114 acca-ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgat 212  Q
    |  | ||| ||| ||||||||||||||||||||||||||||||||    ||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  10565309 attagggtgttgttaacgagtgtcctaagaacactctttaagaat----tctaaattaagaaactattcattgaaaaagtctaatactttaatttttgat 10565404  T
Q  213 gtattgaatgcacaaatttccataagaatttact 246  Q
    ||||||||||||||||||||||||| ||||||||    
T  10565405 gtattgaatgcacaaatttccataaaaatttact 10565438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 246
Target Start/End: Original strand, 12787816 - 12787941
Alignment:
Q  117 aggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtat 216  Q
    |||||||| ||||||||||| |||||| |||||||||||||    |||||||||| ||| |||||||||||||||| |||| |||||||||   ||  ||    
T  12787816 aggtcttgttaacgagtgtcttaagaatactctttaagaat----tctaaattaaaaaattatttattgaaaaagtataatgcttcaatttccaattcat 12787911  T
Q  217 tgaatgcacaaatttccataagaatttact 246  Q
    | ||||||||||||| ||||| || |||||    
T  12787912 taaatgcacaaattttcataaaaacttact 12787941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 44042514 - 44042630
Alignment:
Q  126 taacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcac 225  Q
    ||||||||| |||||| |||||||||||| |||    |  ||||||||||||||| |||||||||||  |||||||||||||   ||| |||||||||||    
T  44042514 taacgagtgccctaaggacactctttaaggatt----cataattaagaaactattcattgaaaaagttcaatacttcaatttccaatgcattgaatgcac 44042609  T
Q  226 aaatttccataagaatttact 246  Q
    ||||||| |||| || |||||    
T  44042610 aaatttctataaaaacttact 44042630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 244
Target Start/End: Complemental strand, 20142576 - 20142454
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtatt 217  Q
    ||||||| |||||||||||||||| ||||||||||||     ||| | |||||||||| ||||| || ||||||| ||| |||| |||||| |||| |||    
T  20142576 ggtcttgttaacgagtgtcctaaggacactctttaag----gtatttcaattaagaaattatttttttaaaaagtttaacactttaattttcgatgcatt 20142481  T
Q  218 gaatgcacaaatttccataagaattta 244  Q
     ||||||||| || |||||| ||||||    
T  20142480 aaatgcacaatttcccataaaaattta 20142454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 40464501 - 40464421
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||| |||||||| |||||||| || ||||| ||||||||| ||||| |||||||||||| || |||||| ||||||||    
T  40464501 aattaaaaaactattcattgaaaatgtttaatatttcaattttcgatgttttgaatgcacaagttaccataaaaatttact 40464421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 3100234 - 3100168
Alignment:
Q  171 agaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    ||||||||||||   |||| ||| | ||||||||||||||||| ||||||| || ||||||||||||    
T  3100234 agaaactatttaccaaaaatgtcaagtacttcaatttttgatgcattgaattcataaatttccataa 3100168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 24457835 - 24457881
Alignment:
Q  161 atctaaattaagaaactatttattgaaaaagtctaatacttcaattt 207  Q
    ||||||||||| |||||||| ||||||||||||||||  ||||||||    
T  24457835 atctaaattaaaaaactattcattgaaaaagtctaatgtttcaattt 24457881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 6904192 - 6904261
Alignment:
Q  177 tatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||| ||||||||||| |||| |||||||||  |||| |||||| |||||| ||||||||| || |||||    
T  6904192 tattcattgaaaaagtttaatgcttcaatttccgatgcattgaacgcacaagtttccataaaaaattact 6904261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 40914644 - 40914584
Alignment:
Q  186 aaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    ||||| |||||||||||||||||  ||| ||| ||| ||||||||| ||||| ||||||||    
T  40914644 aaaaaatctaatacttcaattttcaatgcattaaattcacaaattttcataaaaatttact 40914584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 43238234 - 43238154
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||| ||||  || ||||||| ||| ||||||||||| |||| ||| |||| | || ||||||||| ||||||||    
T  43238234 aattaagaaattattccttaaaaaagtttaacacttcaattttcgatgcattaaatgtagaattttccataaaaatttact 43238154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 29212711 - 29212791
Alignment:
Q  164 taaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaattta 244  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||| ||||||    
T  29212711 taaattaagaaactattcattgaaaaagtctaatgcttcaatttatgatgtattgaatgcacaagtttctataaaaattta 29212791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 36494188 - 36494269
Alignment:
Q  166 aattaagaaactatttattgaaaaag-tctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    ||||||||||||||| |||||||||  ||||||||||||||||   ||||||||||||||||| ||||||||| || |||||    
T  36494188 aattaagaaactattcattgaaaaaaatctaatacttcaatttccaatgtattgaatgcacaagtttccataaaaacttact 36494269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 11465761 - 11465720
Alignment:
Q  119 gtcttgctaacgagtgtcctaagaacactctttaagaatttt 160  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  11465761 gtcttgttaacgagtgtcctaagaacactctttaaggatttt 11465720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 21813249 - 21813169
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||| |||| ||||||||||| ||| |||| || ||  |||| |||||||||| || ||||||||| ||||||||    
T  21813249 aattaagaaattattcattgaaaaagtttaacactttaaattccgatgcattgaatgcataattttccataaaaatttact 21813169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 10571079 - 10570955
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtatt 217  Q
    |||||| ||||||||| || |||| |||||||||||| |||    || ||||||||||||||| |||||||| ||  ||||||||||||||||||| |||    
T  10571079 ggtcttactaacgagtttcataaggacactctttaaggatt----cttaattaagaaactattcattgaaaatgttcaatacttcaatttttgatgcatt 10570984  T
Q  218 gaatgcacaaatttccataagaatttact 246  Q
    ||||| ||||||||| |||| ||||||||    
T  10570983 gaatgaacaaatttctataaaaatttact 10570955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 29988420 - 29988342
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||| ||||  || ||||||| ||||  |||||||||||||||||||||||  ||| ||||||||| ||||||||    
T  29988420 aattaagaaattattctttaaaaaagtataat--ttcaatttttgatgtattgaatgttcaattttccataaaaatttact 29988342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 2350296 - 2350346
Alignment:
Q  177 tatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaa 227  Q
    |||||||||||||  |||||||| |||||||| ||||||||||||| ||||    
T  2350296 tatttattgaaaatatctaatacgtcaattttcgatgtattgaatgtacaa 2350346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 1252754 - 1252791
Alignment:
Q  187 aaaagtctaatacttcaatttttgatgtattgaatgca 224  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  1252754 aaaagtctaatacttcaatttatgatgcattgaatgca 1252791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 11010253 - 11010328
Alignment:
Q  162 tctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||| |||||||||    
T  11010253 tctaaattaagaaactattcattgaaaaagtctaatacttcaatttctgatgcattgaatacacaactttccataa 11010328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 40944364 - 40944280
Alignment:
Q  162 tctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||||||| |||| ||||||||||| |||| |||||||||| |||| |||||||| |||||||||||||| ||||||||    
T  40944364 tctaaattaagaaattattcattgaaaaagtataatgcttcaattttcgatgcattgaatgtacaaatttccataaaaatttact 40944280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 14116478 - 14116590
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtatt 217  Q
    |||||||||||||| |||||||||   |||||||||| |||||     ||||||||||||||||||| |||||||||||| ||  |||||| |||  |||    
T  14116478 ggtcttgctaacgaatgtcctaaggttactctttaaggattttc----aattaagaaactatttattaaaaaagtctaatgctctaattttcgataaatt 14116573  T
Q  218 gaatgcacaaatttcca 234  Q
     ||||||||||||||||    
T  14116574 aaatgcacaaatttcca 14116590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 248599 - 248474
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaa-gtctaatacttcaatttttgatgtat 216  Q
    ||||||| ||||||||||| ||||  |||||||||||  ||    || |||||||||| ||||| || ||||| || ||| ||||||||||  |||||||    
T  248599 ggtcttgttaacgagtgtcttaagggcactctttaaggttt----ctcaattaagaaattatttctttaaaaaagtttaacacttcaatttccgatgtat 248504  T
Q  217 tgaatgcacaaatttccataagaatttact 246  Q
    ||||||||||| ||||||||| ||||||||    
T  248503 tgaatgcacaattttccataaaaatttact 248474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 246
Target Start/End: Original strand, 42877212 - 42877337
Alignment:
Q  117 aggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtat 216  Q
    ||||||||||||||||||| ||||| ||||||||||| | ||   ||| |||| ||||| |||| ||  ||||||| ||| | |||||||||  ||||||    
T  42877212 aggtcttgctaacgagtgttctaaggacactctttaa-agtt---tctcaattgagaaattattcatgaaaaaagtttaaaatttcaattttcaatgtat 42877307  T
Q  217 tgaatgcacaaatttccataagaatttact 246  Q
    ||||| ||||| ||||||||| ||||||||    
T  42877308 tgaatacacaattttccataaaaatttact 42877337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 30327627 - 30327584
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaatttta 161  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  30327627 ggtcttgctaacgagtgtccttaggacactctttaagaatttta 30327584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 15206585 - 15206517
Alignment:
Q  168 ttaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    |||||||||| || ||| |||||||| |||||||||||||| |||  ||||||||||||||||| |||||    
T  15206585 ttaagaaacttttcatt-aaaaagtccaatacttcaattttcgattcattgaatgcacaaattttcataa 15206517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 43390425 - 43390370
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaat 221  Q
    ||||||||||||||| |||  ||||||||||||||| ||||||  |||||||||||    
T  43390425 aattaagaaactattcattagaaaagtctaatactttaattttcaatgtattgaat 43390370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 20721337 - 20721277
Alignment:
Q  177 tatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    |||||||| |||||||  || | |||||||||  |||||||||||||||| ||||||||||    
T  20721337 tatttatttaaaaagttaaacatttcaattttcaatgtattgaatgcacatatttccataa 20721277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 42308116 - 42308060
Alignment:
Q  175 actatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaattt 231  Q
    |||||| |||||||| || |||||||| ||||| |||||  ||||||||||||||||    
T  42308116 actattcattgaaaatgtataatactttaatttctgatgcgttgaatgcacaaattt 42308060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 46895941 - 46896025
Alignment:
Q  162 tctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||  |||| |||||||||| ||||||| |||| || |||||    
T  46895941 tctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatgcattgaatgcataaatttctataaaaacttact 46896025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 9500970 - 9500923
Alignment:
Q  161 atctaaattaagaaactatttattgaaaaagtctaatacttcaatttt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9500970 atctaaattaagaaactatttattgaaaaagtctaatacttcaatttt 9500923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 44584185 - 44584063
Alignment:
Q  119 gtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattg 218  Q
    |||||||||||||||| | |||  |||||||||||| |    ||||||||||||||||||||| |||||||||||||||  |||||||||  |||||||     
T  44584185 gtcttgctaacgagtg-cataatgacactctttaagga----atctaaattaagaaactatttgttgaaaaagtctaatgtttcaattttcaatgtatta 44584091  T
Q  219 aatgcacaaatttccataagaatttact 246  Q
    ||||||||| ||| ||||| || |||||    
T  44584090 aatgcacaagttttcataaaaacttact 44584063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 44920231 - 44920311
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||| |||| ||| ||||||| ||| |||||||||| ||||| ||||||||||||| ||||||||| ||||||||    
T  44920231 aattaagaaattattcattaaaaaagtttaacacttcaatttatgatgcattgaatgcacaattttccataaaaatttact 44920311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 18032202 - 18032273
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    |||||||||| |||||||||||||||| |||| |||||||||  |||| ||| |||||| || |||||||||    
T  18032202 aattaagaaattatttattgaaaaagtttaatgcttcaatttccgatgcattaaatgcataagtttccataa 18032273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 26533849 - 26533729
Alignment:
Q  122 ttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaat 221  Q
    ||||||||||||||| ||| |||||| |||||| |||    || |||||||||| |||  |||||||||||||||   ||||||||  | ||| || |||    
T  26533849 ttgctaacgagtgtcataataacactttttaaggatt----ctcaattaagaaattatcaattgaaaaagtctaacgtttcaatttccgctgttttaaat 26533754  T
Q  222 gcacaaatttccataagaatttact 246  Q
    |||||| ||||||||| ||||||||    
T  26533753 gcacaagtttccataaaaatttact 26533729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 14758528 - 14758652
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtatt 217  Q
    ||||||| ||||||||||||||||  ||||||||||  | |||  |  |||||||||| ||||  || ||||||| ||| | ||||||||| |||| |||    
T  14758528 ggtcttgttaacgagtgtcctaagggcactctttaa--agttttcc--aattaagaaattattccttaaaaaagtttaacatttcaattttcgatgcatt 14758623  T
Q  218 gaatgcacaaatttccataagaatttact 246  Q
    |||||||||| ||| ||||| ||||||||    
T  14758624 gaatgcacaatttttcataaaaatttact 14758652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 18038906 - 18038977
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    ||||||||||| ||  ||||||||| |||||| |||||||||  |||| ||||||| ||||||||| |||||    
T  18038906 aattaagaaacaatgcattgaaaaaatctaatgcttcaatttccgatgcattgaatacacaaattttcataa 18038977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 19547186 - 19547062
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtatt 217  Q
    ||||||||||||||||| ||||||  || |||||||| |||    |  || ||||||| |||| |||||||| ||| ||||||||||||   |||| |||    
T  19547186 ggtcttgctaacgagtgccctaagggcattctttaaggatt----cccaagtaagaaattattcattgaaaatgtccaatacttcaattcccgatgcatt 19547091  T
Q  218 gaatgcacaaatttccataagaatttact 246  Q
    |||||||||| |||| |||| || |||||    
T  19547090 gaatgcacaagtttctataaaaacttact 19547062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 26765974 - 26766025
Alignment:
Q  173 aaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgca 224  Q
    |||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||    
T  26765974 aaactattcattgaaaaagtttaatatttcaatttctgatggattgaatgca 26766025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 38293977 - 38294009
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctt 150  Q
    ||||||| |||||||||||||||||||||||||    
T  38293977 ggtcttgataacgagtgtcctaagaacactctt 38294009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 45925461 - 45925497
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaag 154  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  45925461 ggtcttgttaacgagtgtcctaaggacactctttaag 45925497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 13478 - 13549
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||  |||||||||||| |||||||||    
T  13478 aattaagaaactattcattgaaaaagtctaatacttcaatttccgatgctttgaatgcacaagtttccataa 13549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 244
Target Start/End: Complemental strand, 44319992 - 44319870
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtatt 217  Q
    ||||||| |||||||||||||||| ||||||||||||     ||| | |||||||||| ||||| || ||||||| ||| |||| |||||| |||| |||    
T  44319992 ggtcttgttaacgagtgtcctaaggacactctttaag----gtatttcaattaagaaattatttttttaaaaagtttaacactttaattttcgatgcatt 44319897  T
Q  218 gaatgcacaaatttccataagaattta 244  Q
     ||||||||| || |||||| ||||||    
T  44319896 aaatgcacaatttcccataaaaattta 44319870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 3298231 - 3298309
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaattta 244  Q
    ||||||||||||||| ||||||||||  | ||| |||||||| ||||| |||||||||  || ||||||||| ||||||    
T  3298231 aattaagaaactattcattgaaaaagcttcatatttcaatttctgatgcattgaatgcttaagtttccataaaaattta 3298309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 4507957 - 4507909
Alignment:
Q  173 aaactatttattgaaaaagtctaatacttcaatttttgatgtattgaat 221  Q
    |||||||||| || |||||| |||||||||||||||||||| |||||||    
T  4507957 aaactatttactgtaaaagtttaatacttcaatttttgatgcattgaat 4507909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 5496063 - 5495992
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    |||||||||| ||||  ||||||| || ||| |||| |||||| |||| ||||||||||||| |||||||||    
T  5496063 aattaagaaattattccttgaaaatgtttaacactttaattttcgatgcattgaatgcacaactttccataa 5495992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 24557747 - 24557789
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttt 208  Q
    |||||| ||| |||||||| |||||||||||||||||||||||    
T  24557747 aattaaaaaattatttattaaaaaagtctaatacttcaatttt 24557789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 41898267 - 41898345
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaattta 244  Q
    |||||||||||| || |||||||||||  |||| ||||||||  |||| ||| |||| |||| ||||||||| ||||||    
T  41898267 aattaagaaacttttcattgaaaaagttcaataattcaatttccgatgcattaaatgtacaagtttccataacaattta 41898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 27156877 - 27156922
Alignment:
Q  186 aaaaagtctaatacttcaatttttgatgtattgaatgcacaaattt 231  Q
    ||||||||||||  |||||||||||||||||  |||||||||||||    
T  27156877 aaaaagtctaatgattcaatttttgatgtatcaaatgcacaaattt 27156922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 43211093 - 43211011
Alignment:
Q  120 tcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatt 206  Q
    ||||| ||||||||||||||||  |||||||||||| ||||     |||||| |||||||||||  ||||||| |||||||| ||||    
T  43211093 tcttgttaacgagtgtcctaagggcactctttaagatttttc----aattaaaaaactatttatctaaaaagtttaatactttaatt 43211011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 25644 - 25582
Alignment:
Q  173 aaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccat 235  Q
    |||||||||||||||| ||||||||| ||||||||| |||| | |||||| ||||||||||||    
T  25644 aaactatttattgaaagagtctaatatttcaattttcgatgcagtgaatgtacaaatttccat 25582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 43809118 - 43809223
Alignment:
Q  117 aggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtat 216  Q
    |||| |||||||||||||||||||| |||||||||||||||    |||||||||||||| |||  |||| |||| | |||  |||| |||||||||  ||    
T  43809118 aggttttgctaacgagtgtcctaaggacactctttaagaat----tctaaattaagaaattatgcattg-aaaattttaaagcttcgatttttgatacat 43809212  T
Q  217 tgaatgcacaa 227  Q
    |||||||||||    
T  43809213 tgaatgcacaa 43809223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 49012016 - 49011915
Alignment:
Q  122 ttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaat 221  Q
    ||||||||||||| ||||||  ||||||||||| |||||     ||| ||||| ||||| ||| ||||||| ||||||||||||||| |||| ||| |||    
T  49012016 ttgctaacgagtgacctaagtgcactctttaaggattttt----aatcaagaatctattcattaaaaaagtttaatacttcaattttcgatgcattaaat 49011921  T
Q  222 gcacaa 227  Q
    ||||||    
T  49011920 gcacaa 49011915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 7388788 - 7388868
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||| |||  ||||||||||||||||  | ||||||  |||| ||| ||||||||| ||||||||| ||||||||    
T  7388788 aattaagaaaatatccattgaaaaagtctaatgttccaatttccgatgcattaaatgcacaagtttccataaaaatttact 7388868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 246
Target Start/End: Original strand, 19652601 - 19652726
Alignment:
Q  117 aggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtat 216  Q
    |||||||| |||| ||| |||||||| |||||||||||  ||    ||||||||||| | |||| |||||||| || ||||| || |||||   ||| ||    
T  19652601 aggtcttgttaacaagtatcctaagagcactctttaaggttt----ctaaattaagatattattcattgaaaatgtataatagtttaatttccaatgcat 19652696  T
Q  217 tgaatgcacaaatttccataagaatttact 246  Q
    ||||||||||||||| ||||| || |||||    
T  19652697 tgaatgcacaaattttcataaaaacttact 19652726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 40781492 - 40781432
Alignment:
Q  177 tatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataa 237  Q
    |||||||||||||||| |||| ||| ||||| ||||| |||||||||| | ||||||||||    
T  40781492 tatttattgaaaaagtttaatgctttaatttctgatgcattgaatgcatagatttccataa 40781432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 46506338 - 46506408
Alignment:
Q  166 aattaagaaactatttattg--aaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttcca 234  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||  |||| ||| |||| | |||||||||    
T  46506338 aattaagaaactatttattgaaaaaaaatctaatacttcaatttccgatgcattaaatggataaatttcca 46506408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 38682631 - 38682717
Alignment:
Q  123 tgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaagtctaatacttcaatttttgatg 213  Q
    |||||||||||||| |||| | | ||||||||||||||     |||||||||| |||| ||| |||| || |||||||||||||| |||||    
T  38682631 tgctaacgagtgtcttaaggatattctttaagaattttt----aattaagaaaatattcattaaaaatgtgtaatacttcaatttctgatg 38682717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 49360012 - 49360053
Alignment:
Q  117 aggtcttgctaacgagtgtcctaagaacactctttaagaatt 158  Q
    |||||||| ||||||||| |||||||||||| ||||||||||    
T  49360012 aggtcttgttaacgagtgccctaagaacactttttaagaatt 49360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 14452269 - 14452233
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaag 154  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  14452269 ggtcttgctaacgagtgtcttaaggacactctttaag 14452233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 38949152 - 38949072
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||| ||| ||||| || ||||| | ||| ||||||||||  |||| ||||||||||||| ||| ||||| ||||||||    
T  38949152 aattaaaaaattatttcttaaaaaaatttaacacttcaatttccgatgcattgaatgcacaatttttcataaaaatttact 38949072  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 11580514 - 11580434
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||| ||| |||| ||| || ||||||||||||||||||||||||| ||||||| ||||  ||||||||| || |||||    
T  11580514 aattaaaaaattattcattaaataagtctaatacttcaatttttgatggattgaatacacatgtttccataaaaacttact 11580434  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 11252781 - 11252723
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgca 224  Q
    |||||||||||| || |||||||||||||| |||||||||||| |||  ||||||||||    
T  11252781 aattaagaaacttttaattgaaaaagtctactacttcaattttcgatacattgaatgca 11252723  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 27921859 - 27921971
Alignment:
Q  118 ggtcttgctaacgagtgtcctaagaacactctttaagaattttatctaaattaagaaactatttattgaaaaa-gtctaatacttcaatttttgatgtat 216  Q
    |||||||||||| ||| | || || |||||||||||| |||    ||||||||||||| |||||||| |||||  ||||||| |||||||||  ||| ||    
T  27921859 ggtcttgctaacaagtatactcaggacactctttaagtatt----ctaaattaagaaattatttattaaaaaacctctaatatttcaattttaaatgcat 27921954  T
Q  217 tgaatgcacaaatttcc 233  Q
    |||||| | ||||||||    
T  27921955 tgaatgtataaatttcc 27921971  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 36260442 - 36260505
Alignment:
Q  168 ttaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaattt 231  Q
    |||||||  |||| |||||||||||||||| ||||||||| ||||| ||| ||| |||||||||    
T  36260442 ttaagaagttattaattgaaaaagtctaatgcttcaatttctgatgcattaaatacacaaattt 36260505  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 33963036 - 33962958
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaattta 244  Q
    |||||||||| ||||  || ||||||| ||| |||||||||||  ||| ||||||||||||| ||| ||||| ||||||    
T  33963036 aattaagaaattattctttaaaaaagtttaacacttcaattttcaatgcattgaatgcacaatttttcataaaaattta 33962958  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 18734365 - 18734445
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||| ||||  || ||||||| ||| ||||||||||  |||  ||||||||||||| ||| ||||| ||||||||    
T  18734365 aattaagaaattattccttaaaaaagtttaacacttcaatttccgatacattgaatgcacaatttttcataaaaatttact 18734445  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 32770863 - 32770783
Alignment:
Q  166 aattaagaaactatttattgaaaaagtctaatacttcaatttttgatgtattgaatgcacaaatttccataagaatttact 246  Q
    |||||||||| ||||||||||||||   ||||||||||||||   ||| |||||  ||| |||||||||||| | ||||||    
T  32770863 aattaagaaattatttattgaaaaaacttaatacttcaatttcgaatgcattgaccgcataaatttccataaaattttact 32770783  T

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