View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2026_high_3 (Length: 347)
Name: NF2026_high_3
Description: NF2026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2026_high_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 15 - 347
Target Start/End: Original strand, 44066027 - 44066359
Alignment:
| Q |
15 |
cctgtgttttctcttttctgtatatgaggaacaggggaaagtagggaattgtcaaaaacacaataatcttgttttctcatttataaaagtttatttaatt |
114 |
Q |
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| T |
44066027 |
cctgtgttttctcttttctgtatatgaggaacaggggaaagtagggaattgtcaaaaacacaataatcttgttttctcatttataaaagtttatttaatt |
44066126 |
T |
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| Q |
115 |
taaggctgataaatactagtgtttgtaacttataagaatcttgagtataatcctatcttactattttctttaagctctctgagaactatgattcagaata |
214 |
Q |
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| T |
44066127 |
taaggctgataaatactagtgtttgtaacttataagaatcttgagtataattctatcttactattttctttaagctctctgagaactatgattcagaata |
44066226 |
T |
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| Q |
215 |
cggtggttttggatctgcaccaaaatttccaagaccggttgagatcaacttgatgctttacaaatctaaaaagttggaggataccggaaagttagatgga |
314 |
Q |
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| T |
44066227 |
cggtggttttggatctgcaccaaaatttccaagaccggttgagatcaacttgatgctttacaaatctaaaaagttggaggataccggaaagttagatgga |
44066326 |
T |
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| Q |
315 |
gctaacaaaagtcagaaaatggttttctttacc |
347 |
Q |
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| T |
44066327 |
gctaacaaaagtcagaaaatggttttctttacc |
44066359 |
T |
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