View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2026_low_3 (Length: 413)
Name: NF2026_low_3
Description: NF2026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2026_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 10 - 394
Target Start/End: Original strand, 22073616 - 22074001
Alignment:
| Q |
10 |
agatgaagattcggcatgacctgttaatggcacatgtaacttgttattttgaataattatatttcttttttctctgcttagaaccgcgacctctggttgg |
109 |
Q |
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| T |
22073616 |
agatgaagattcagcatgacctgttaatggcacatctaacttgttattttgcaaaattctttttcttttttctctgcttagaactgcgacctctggttgg |
22073715 |
T |
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| Q |
110 |
attctgcttccatcaaattgttttggattgggcagttgaggagaatgaacacaaacttttttggatgcagcaagtgccttactttggtagagaattcttt |
209 |
Q |
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| T |
22073716 |
attctgcttccattaaattgttttggattgggcagttgaggagaatgaacacaaactttttttgatgcagcaagtgccttactttggtagagaattcttt |
22073815 |
T |
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| Q |
210 |
tcctgttttctcttcctgctgctgcattttcatgttgaagcactgtttcattcaaattaataggtttaatgactttgagttttggtttgactttagaagt |
309 |
Q |
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| T |
22073816 |
tcctgttttctcttcctgctgctgcattttcatgttgaagcactgtttcattaaaattaataggtttaatgactttgagttttggtttgactttagaaat |
22073915 |
T |
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| Q |
310 |
tcgtgtgttaatatcagtagacacacatactttcttgccttctaacactaatttccttctctct-ttgaagttgactgttgttctt |
394 |
Q |
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| T |
22073916 |
tggtgtgttaatgttagtagacacacatactttcttgccttctaacactaatttccttctctttcttgaagttgactgttgttctt |
22074001 |
T |
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