View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2026_low_7 (Length: 311)
Name: NF2026_low_7
Description: NF2026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2026_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 11696949 - 11696654
Alignment:
| Q |
1 |
ccaaaccttcttcaatcatttctgagaaaactttaagagcttccttaccacgtccatgaatcgcaagaccagatatcattacagtgtaagaaaatctatt |
100 |
Q |
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| T |
11696949 |
ccaaaccttcttcaatcatttctgagaaaactttaagagcttccttaccacgtccatgaatcgcaagaccagatatcattacagtgtaagaatatctatt |
11696850 |
T |
|
| Q |
101 |
cttctccgacatattctcgaatacgcgtaaacctttctcaagacatccacacttgacatacatatcaattaacgaagtcttcacaacaacattgagttca |
200 |
Q |
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||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11696849 |
cttctccgacatatttttgaatacgcgtaaacctttctcaagacatccactcttgacatacatatcaattaacgaagtcttcacaacaacattgagttca |
11696750 |
T |
|
| Q |
201 |
ctaatgttcctcaacaagatcccgtgtatacactttccaagatcaggagaccctaaatgagtgcaagcagagagcacattaacaagtgtgctttct |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11696749 |
ctaatgttcctcaacaagatcccgtgtatacactttccaagatcaggagaccctaaatgagtgcaagcagagagcacattaacaagtgtgctttct |
11696654 |
T |
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