View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20270_high_20 (Length: 271)
Name: NF20270_high_20
Description: NF20270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20270_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 45445430 - 45445178
Alignment:
| Q |
1 |
atctaccgttaagaaaatgtttttgttggcgaccaacacgacgagaattgacttcgtcctacaggagtttctgttatcttcactagccttttatttcgat |
100 |
Q |
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| T |
45445430 |
atctaccgttaagaaaatgtttttgttggcgaccaacacgacgagaattgacttcgtcctacaggagtttctgttatcttcactagccttttatttcgat |
45445331 |
T |
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| Q |
101 |
tcttttgatgagagtatggtatccacgtactagctggggatccacttctatactcagaattttcatgcaagggtttctaatctttaatgatgaaagcatc |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45445330 |
tcttttgatgagagtatggtatcc----actagctggggatccacttctatactcagaattttcatgcaagggtttctaatctttaatgatgaaagcatc |
45445235 |
T |
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| Q |
201 |
ggata----atatttattgtgaagcaggttacaaagacaatgctcgaatcatttatc |
253 |
Q |
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||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
45445234 |
ggataatatatatttattgtgaagcagattacaaagacaatgctcgaatcatttatc |
45445178 |
T |
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