View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20270_low_27 (Length: 249)
Name: NF20270_low_27
Description: NF20270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20270_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 34064912 - 34065150
Alignment:
| Q |
1 |
tttgaataaacagcttcactaccagatgactcattatcagaatcattccttgattgcagtacttcattagcttctgaggttgaacagcaagaatcaataa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34064912 |
tttgaataaacagcttcactaccagatgactcattatcagaatcattccttgattgcagtacttcattagcttctgaggttgaacagcaagaatcaataa |
34065011 |
T |
|
| Q |
101 |
aatcaatcatctttttgtcatcttctctcattttttgaccataagcttcaaagttcattccagctgtattttttccaccaaaacaggattctagcttgtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34065012 |
aatcaatcatctttttgtcatcttctctcattttttgaccataagcttcaaagttcattccagctgtattttttccaccaaaacaggattctagcttgtc |
34065111 |
T |
|
| Q |
201 |
catgtcaaagagttcttccatcatcgttcggctcctttg |
239 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
34065112 |
catgtcaaagagttcttccatcatcgttcggctcctttg |
34065150 |
T |
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