View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20273_low_5 (Length: 288)
Name: NF20273_low_5
Description: NF20273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20273_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 13 - 272
Target Start/End: Complemental strand, 48494231 - 48493972
Alignment:
| Q |
13 |
aaggggtaacaaatcatcagaagtcattgcaaacaaaggtgaactgcctctaaataatgtgccagctgctgtggcaacaaatggggctgaaatttatttg |
112 |
Q |
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| T |
48494231 |
aaggggtaacaaatcatcagaagtcattgcaaacaaaggtgaactgcctctaaataatgtgccagctgctgtggcaacaaatggggctgaaatttatttg |
48494132 |
T |
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| Q |
113 |
gcatttcagcttcaaacaacaattccatttgggaagcaaccaattttgttggcttttagtactaagcatccacatgaacaccacctgtcaaagcatgatg |
212 |
Q |
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| T |
48494131 |
gcatttcagcttcaaacaacaattccatttgggaagcaaccaattttgttggcttttagtactaagcatccacatgaacaccacctgtcaaagcatgatg |
48494032 |
T |
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| Q |
213 |
acaaaacaacaattatatttgatttttcttcaggtgcaaaatcaggtagctttttatttg |
272 |
Q |
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| T |
48494031 |
acaaaacaacaattatatttgatttttcttcaggtgcaaaatcaggtagctttttatttg |
48493972 |
T |
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