View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20278_high_19 (Length: 240)

Name: NF20278_high_19
Description: NF20278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20278_high_19
NF20278_high_19
[»] chr5 (39 HSPs)
chr5 (19-239)||(27328833-27329052)
chr5 (19-78)||(38879662-38879721)
chr5 (19-77)||(16957393-16957451)
chr5 (19-76)||(24448969-24449026)
chr5 (21-61)||(7097774-7097814)
chr5 (19-71)||(25622539-25622591)
chr5 (24-78)||(32354211-32354265)
chr5 (19-77)||(32703501-32703559)
chr5 (19-77)||(39801595-39801653)
chr5 (19-76)||(16028623-16028680)
chr5 (19-76)||(43334284-43334340)
chr5 (19-76)||(43574685-43574742)
chr5 (34-70)||(18684367-18684403)
chr5 (19-78)||(41014397-41014456)
chr5 (19-77)||(4619102-4619160)
chr5 (19-76)||(8169983-8170040)
chr5 (19-56)||(10306493-10306530)
chr5 (19-71)||(5873326-5873378)
chr5 (19-71)||(7368475-7368527)
chr5 (19-71)||(12006332-12006384)
chr5 (19-71)||(13801771-13801823)
chr5 (19-71)||(21784336-21784388)
chr5 (19-75)||(30006404-30006460)
chr5 (19-71)||(30877568-30877620)
chr5 (19-71)||(34154818-34154870)
chr5 (19-78)||(3771418-3771477)
chr5 (21-68)||(16880654-16880701)
chr5 (19-61)||(4654429-4654471)
chr5 (24-66)||(13774949-13774991)
chr5 (19-61)||(19142957-19142999)
chr5 (21-71)||(22187368-22187418)
chr5 (19-61)||(22861683-22861725)
chr5 (19-85)||(29334475-29334541)
chr5 (19-76)||(10943844-10943900)
chr5 (38-71)||(29184065-29184098)
chr5 (19-76)||(35710390-35710447)
chr5 (19-71)||(1565511-1565562)
chr5 (19-71)||(12575664-12575716)
chr5 (19-71)||(20135685-20135737)
[»] chr8 (41 HSPs)
chr8 (19-76)||(28817625-28817682)
chr8 (19-69)||(27507989-27508039)
chr8 (20-76)||(18595918-18595974)
chr8 (21-77)||(39460992-39461048)
chr8 (19-77)||(12625969-12626027)
chr8 (19-76)||(35261758-35261815)
chr8 (19-69)||(20284075-20284125)
chr8 (19-69)||(21070703-21070753)
chr8 (26-76)||(27468091-27468141)
chr8 (19-77)||(36720875-36720933)
chr8 (19-69)||(44530228-44530278)
chr8 (22-71)||(17823658-17823707)
chr8 (27-76)||(18164759-18164808)
chr8 (19-76)||(25250603-25250660)
chr8 (19-76)||(26102596-26102653)
chr8 (19-76)||(30454096-30454153)
chr8 (20-77)||(31457252-31457309)
chr8 (19-71)||(13160780-13160832)
chr8 (19-71)||(28407482-28407534)
chr8 (19-71)||(45071343-45071395)
chr8 (19-61)||(29877173-29877215)
chr8 (19-76)||(6760903-6760960)
chr8 (19-68)||(7136534-7136583)
chr8 (19-76)||(8897763-8897820)
chr8 (19-76)||(10857908-10857965)
chr8 (19-68)||(12670257-12670306)
chr8 (21-77)||(16013537-16013594)
chr8 (19-76)||(20870004-20870061)
chr8 (26-71)||(33867038-33867083)
chr8 (19-76)||(35107310-35107367)
chr8 (22-70)||(5689713-5689761)
chr8 (19-71)||(17250880-17250931)
chr8 (34-70)||(29521690-29521726)
chr8 (19-71)||(42083702-42083754)
chr8 (19-69)||(16225100-16225150)
chr8 (19-61)||(44781518-44781560)
chr8 (19-76)||(5135289-5135345)
chr8 (19-56)||(24245528-24245565)
chr8 (19-55)||(24365079-24365115)
chr8 (19-71)||(36486570-36486622)
chr8 (17-61)||(40444843-40444887)
[»] chr3 (46 HSPs)
chr3 (19-77)||(13628788-13628846)
chr3 (19-76)||(40272811-40272868)
chr3 (19-76)||(54484792-54484849)
chr3 (19-76)||(516513-516570)
chr3 (20-77)||(10484614-10484671)
chr3 (19-61)||(829456-829498)
chr3 (19-77)||(25517168-25517226)
chr3 (19-77)||(29366718-29366776)
chr3 (19-77)||(30452896-30452954)
chr3 (30-76)||(40390353-40390399)
chr3 (19-76)||(1217189-1217246)
chr3 (23-76)||(5173718-5173771)
chr3 (19-76)||(13730601-13730658)
chr3 (19-76)||(24851300-24851357)
chr3 (27-76)||(47624208-47624257)
chr3 (19-76)||(52926218-52926275)
chr3 (19-71)||(353353-353405)
chr3 (19-71)||(22609866-22609918)
chr3 (19-71)||(39203615-39203667)
chr3 (19-71)||(45786218-45786270)
chr3 (24-71)||(14266376-14266423)
chr3 (34-77)||(54032569-54032612)
chr3 (34-76)||(4495675-4495717)
chr3 (19-61)||(45948852-45948894)
chr3 (19-76)||(46421033-46421091)
chr3 (19-76)||(15797321-15797378)
chr3 (19-76)||(26869807-26869864)
chr3 (19-76)||(34771363-34771420)
chr3 (19-76)||(44403554-44403611)
chr3 (19-76)||(49013472-49013529)
chr3 (19-71)||(10795427-10795479)
chr3 (19-71)||(22122921-22122973)
chr3 (19-71)||(31592948-31593000)
chr3 (19-77)||(26292431-26292490)
chr3 (35-74)||(43114869-43114908)
chr3 (19-58)||(54374362-54374401)
chr3 (19-61)||(6411836-6411878)
chr3 (38-76)||(7943110-7943148)
chr3 (19-77)||(16735541-16735599)
chr3 (19-61)||(26573228-26573270)
chr3 (19-61)||(34420657-34420699)
chr3 (19-56)||(8247706-8247743)
chr3 (19-68)||(14987060-14987109)
chr3 (19-76)||(53996564-53996621)
chr3 (21-77)||(12914033-12914089)
chr3 (19-71)||(35418005-35418057)
[»] chr2 (47 HSPs)
chr2 (19-77)||(9671258-9671316)
chr2 (19-76)||(10546242-10546299)
chr2 (19-71)||(10543779-10543831)
chr2 (19-71)||(14530399-14530451)
chr2 (19-77)||(8455314-8455372)
chr2 (19-77)||(39914304-39914361)
chr2 (19-76)||(14444807-14444864)
chr2 (19-76)||(25249737-25249794)
chr2 (19-68)||(34766334-34766383)
chr2 (27-75)||(124914-124962)
chr2 (19-71)||(40579753-40579805)
chr2 (19-70)||(23488562-23488613)
chr2 (19-77)||(21779259-21779317)
chr2 (27-77)||(22371199-22371249)
chr2 (22-76)||(24859987-24860041)
chr2 (19-77)||(34080180-34080238)
chr2 (19-76)||(17896339-17896396)
chr2 (20-61)||(19615073-19615114)
chr2 (19-76)||(36871571-36871627)
chr2 (19-71)||(25079721-25079773)
chr2 (19-71)||(41409941-41409993)
chr2 (20-71)||(8575975-8576026)
chr2 (19-77)||(26684617-26684676)
chr2 (19-78)||(44643602-44643661)
chr2 (19-77)||(5841109-5841167)
chr2 (22-76)||(17668084-17668138)
chr2 (19-61)||(24890490-24890532)
chr2 (25-71)||(25632594-25632640)
chr2 (24-77)||(11514519-11514572)
chr2 (20-61)||(14544146-14544187)
chr2 (27-76)||(27573707-27573756)
chr2 (19-71)||(13245099-13245151)
chr2 (19-55)||(21377093-21377129)
chr2 (19-59)||(25641580-25641620)
chr2 (24-76)||(39189503-39189555)
chr2 (19-71)||(40762238-40762290)
chr2 (19-58)||(31158456-31158495)
chr2 (21-71)||(3633712-3633762)
chr2 (22-76)||(17623646-17623700)
chr2 (22-64)||(19185754-19185796)
chr2 (19-61)||(19977728-19977770)
chr2 (21-63)||(22363507-22363549)
chr2 (19-76)||(24200622-24200679)
chr2 (19-59)||(4516367-4516407)
chr2 (19-71)||(23397843-23397895)
chr2 (19-59)||(24059012-24059052)
chr2 (19-75)||(31821343-31821399)
[»] scaffold0057 (3 HSPs)
scaffold0057 (19-76)||(24771-24828)
scaffold0057 (19-76)||(46910-46967)
scaffold0057 (19-63)||(46719-46763)
[»] chr6 (25 HSPs)
chr6 (19-76)||(29355854-29355911)
chr6 (19-76)||(6808474-6808531)
chr6 (19-78)||(1354754-1354813)
chr6 (19-78)||(12885992-12886051)
chr6 (19-76)||(12221913-12221971)
chr6 (18-76)||(26097236-26097294)
chr6 (22-76)||(30786373-30786427)
chr6 (19-76)||(1347041-1347098)
chr6 (19-76)||(12892088-12892145)
chr6 (19-76)||(13267804-13267861)
chr6 (19-71)||(14975094-14975146)
chr6 (19-77)||(23930125-23930183)
chr6 (22-76)||(25557805-25557859)
chr6 (19-68)||(3815084-3815133)
chr6 (19-76)||(9161203-9161260)
chr6 (23-71)||(10734909-10734957)
chr6 (19-59)||(24097656-24097696)
chr6 (19-58)||(11395840-11395879)
chr6 (22-69)||(34850618-34850665)
chr6 (19-76)||(2166409-2166466)
chr6 (19-76)||(2178042-2178099)
chr6 (19-76)||(3116128-3116185)
chr6 (19-71)||(383764-383816)
chr6 (20-76)||(9671083-9671139)
chr6 (20-56)||(29016301-29016337)
[»] chr4 (58 HSPs)
chr4 (19-71)||(7909284-7909337)
chr4 (19-76)||(20639657-20639714)
chr4 (19-76)||(33836486-33836543)
chr4 (19-71)||(38755912-38755964)
chr4 (19-71)||(44363134-44363186)
chr4 (19-61)||(20908650-20908692)
chr4 (21-71)||(40553941-40553991)
chr4 (19-76)||(23501868-23501925)
chr4 (19-76)||(32484312-32484369)
chr4 (19-76)||(35567249-35567306)
chr4 (19-71)||(11394931-11394983)
chr4 (19-71)||(11404658-11404710)
chr4 (19-70)||(21489167-21489218)
chr4 (25-76)||(35532077-35532128)
chr4 (19-61)||(30690190-30690232)
chr4 (19-76)||(5648337-5648394)
chr4 (19-76)||(13256398-13256455)
chr4 (19-76)||(25629128-25629185)
chr4 (19-76)||(30352579-30352636)
chr4 (19-76)||(38786688-38786745)
chr4 (19-71)||(6430630-6430682)
chr4 (19-59)||(14983913-14983953)
chr4 (19-71)||(20225061-20225113)
chr4 (19-71)||(20225155-20225207)
chr4 (19-71)||(20405168-20405220)
chr4 (19-71)||(25388255-25388307)
chr4 (19-71)||(29207902-29207954)
chr4 (21-76)||(30639460-30639515)
chr4 (19-54)||(49796876-49796911)
chr4 (22-61)||(54730334-54730373)
chr4 (22-76)||(11054147-11054201)
chr4 (22-76)||(16408600-16408654)
chr4 (19-77)||(16911643-16911701)
chr4 (19-61)||(47482864-47482906)
chr4 (19-71)||(21647045-21647097)
chr4 (19-71)||(40915907-40915959)
chr4 (19-71)||(44718646-44718698)
chr4 (19-71)||(8473624-8473678)
chr4 (26-61)||(37038137-37038172)
chr4 (23-78)||(51865035-51865090)
chr4 (34-76)||(39077795-39077837)
chr4 (22-76)||(50555655-50555709)
chr4 (19-76)||(54175143-54175201)
chr4 (19-76)||(9832312-9832369)
chr4 (19-76)||(28494230-28494287)
chr4 (19-76)||(36816383-36816440)
chr4 (19-76)||(47444036-47444093)
chr4 (19-76)||(47528529-47528586)
chr4 (25-62)||(48202395-48202432)
chr4 (19-76)||(48598824-48598881)
chr4 (19-76)||(5306659-5306720)
chr4 (19-63)||(8820587-8820631)
chr4 (36-71)||(10660501-10660537)
chr4 (36-71)||(10874646-10874682)
chr4 (19-55)||(25463201-25463237)
chr4 (19-55)||(32478811-32478847)
chr4 (19-71)||(36589823-36589875)
chr4 (24-76)||(56322984-56323036)
[»] chr1 (45 HSPs)
chr1 (19-71)||(4349740-4349792)
chr1 (19-78)||(35005227-35005286)
chr1 (19-77)||(10668329-10668387)
chr1 (19-77)||(27474382-27474440)
chr1 (19-76)||(6925202-6925259)
chr1 (19-80)||(19414539-19414600)
chr1 (19-76)||(27201751-27201808)
chr1 (19-76)||(45812536-45812593)
chr1 (19-76)||(46247952-46248009)
chr1 (19-76)||(50606505-50606562)
chr1 (19-71)||(45402198-45402250)
chr1 (19-71)||(46991906-46991958)
chr1 (19-76)||(18944747-18944805)
chr1 (19-77)||(34725096-34725154)
chr1 (19-76)||(42304206-42304263)
chr1 (19-55)||(15505666-15505702)
chr1 (21-61)||(25554756-25554796)
chr1 (19-70)||(4587568-4587619)
chr1 (23-78)||(9939570-9939625)
chr1 (19-78)||(14617140-14617199)
chr1 (23-61)||(19701677-19701715)
chr1 (19-77)||(20004088-20004146)
chr1 (19-77)||(30395724-30395782)
chr1 (19-61)||(33594145-33594187)
chr1 (19-76)||(1517310-1517367)
chr1 (19-68)||(18741964-18742013)
chr1 (19-76)||(35253186-35253243)
chr1 (28-76)||(50760239-50760287)
chr1 (19-70)||(23768325-23768376)
chr1 (19-66)||(30555217-30555264)
chr1 (19-61)||(12126851-12126893)
chr1 (23-77)||(20999848-20999902)
chr1 (19-61)||(32632571-32632613)
chr1 (22-76)||(38478281-38478335)
chr1 (19-77)||(41319804-41319862)
chr1 (27-76)||(22327206-22327255)
chr1 (19-76)||(31382213-31382270)
chr1 (19-76)||(43768241-43768298)
chr1 (20-61)||(50812043-50812084)
chr1 (20-76)||(8197146-8197202)
chr1 (19-71)||(10378739-10378791)
chr1 (19-55)||(11596614-11596650)
chr1 (19-55)||(30682914-30682950)
chr1 (19-66)||(35117774-35117822)
chr1 (23-71)||(39214962-39215010)
[»] chr7 (38 HSPs)
chr7 (19-76)||(7879717-7879774)
chr7 (19-76)||(34626207-34626264)
chr7 (19-76)||(38262195-38262252)
chr7 (19-71)||(18747566-18747618)
chr7 (20-76)||(21566516-21566572)
chr7 (19-78)||(21172006-21172065)
chr7 (19-61)||(23231636-23231678)
chr7 (19-68)||(2541026-2541075)
chr7 (19-76)||(27889315-27889372)
chr7 (19-76)||(32758338-32758395)
chr7 (19-68)||(35334823-35334872)
chr7 (19-76)||(42391099-42391156)
chr7 (19-76)||(42798748-42798805)
chr7 (19-76)||(42805605-42805662)
chr7 (22-71)||(45018927-45018976)
chr7 (19-71)||(18512457-18512509)
chr7 (19-71)||(48735126-48735178)
chr7 (19-78)||(40463955-40464014)
chr7 (19-77)||(31591107-31591165)
chr7 (19-77)||(35787267-35787325)
chr7 (34-76)||(36602541-36602583)
chr7 (24-61)||(42495876-42495913)
chr7 (19-76)||(47077854-47077911)
chr7 (19-71)||(10693077-10693129)
chr7 (19-71)||(11617592-11617644)
chr7 (19-75)||(33871910-33871966)
chr7 (19-71)||(47716540-47716592)
chr7 (19-61)||(13792164-13792206)
chr7 (19-61)||(21139762-21139804)
chr7 (27-61)||(36267831-36267865)
chr7 (19-61)||(39123974-39124016)
chr7 (19-76)||(43557553-43557611)
chr7 (19-76)||(1408536-1408593)
chr7 (19-76)||(27629713-27629770)
chr7 (19-71)||(29907499-29907549)
chr7 (19-60)||(33500594-33500635)
chr7 (25-61)||(14732835-14732871)
chr7 (23-75)||(24634233-24634285)
[»] scaffold1176 (1 HSPs)
scaffold1176 (19-75)||(1587-1643)
[»] scaffold0049 (1 HSPs)
scaffold0049 (19-71)||(59058-59110)
[»] scaffold0311 (1 HSPs)
scaffold0311 (19-70)||(10889-10940)
[»] scaffold0954 (1 HSPs)
scaffold0954 (19-61)||(3623-3665)
[»] scaffold0015 (1 HSPs)
scaffold0015 (19-77)||(48632-48690)
[»] scaffold0258 (1 HSPs)
scaffold0258 (19-76)||(13023-13080)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-76)||(30656-30713)
[»] scaffold0180 (1 HSPs)
scaffold0180 (19-76)||(24132-24189)
[»] scaffold0018 (1 HSPs)
scaffold0018 (22-71)||(72871-72920)
[»] scaffold0223 (1 HSPs)
scaffold0223 (19-71)||(11208-11260)
[»] scaffold0187 (2 HSPs)
scaffold0187 (19-71)||(10054-10106)
scaffold0187 (19-71)||(20382-20434)


Alignment Details
Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 27328833 - 27329052
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaacataattaaatgcaaatcacaaatgtcagtgtcgtgacgg 118  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || |||||| ||||| |||  ||||||    
T  27328833 gggaccccttcccgaaccctgcgtatgcgggagctttaatgcatcggattgcctttttaacataattaaatgtaa-tcacaagtgtcaatgttatgacgg 27328931  T
Q  119 tgtctgacacgatatgtgtctgacacctagacatttcttcgattagaagtgtctgtgcaagcaaagtttatgctttcattatagaaattatcaaaattga 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27328932 tgtctgacacgatatgtgtctgacacctagacatttcttcgattagaagtgtctgttcaagcaaagtttatgctttcattatagaaattatcaaaattga 27329031  T
Q  219 ttttaattatccttaccaaac 239  Q
    ||||||||||||| |||||||    
T  27329032 ttttaattatcctaaccaaac 27329052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 38879662 - 38879721
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||    
T  38879662 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttaa 38879721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 16957393 - 16957451
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  16957393 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 16957451  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 24448969 - 24449026
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||    
T  24448969 gggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgccctttt 24449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 7097814 - 7097774
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7097814 gaccccttcccgaaccctgcgtatgcgggagctttagtgca 7097774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25622539 - 25622591
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  25622539 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgcc 25622591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 32354211 - 32354265
Alignment:
Q  24 cccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttttaa 32354265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 32703501 - 32703559
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| |||||    
T  32703501 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 32703559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 39801595 - 39801653
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||  ||||| |||||||||||||||||||||| ||||||||| |||||    
T  39801595 gggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgccatttta 39801653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 16028680 - 16028623
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  16028680 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 16028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 43334284 - 43334340
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||||    
T  43334284 gggaccccttcccggaccctgcg-atgcgggagctttagtgcaccgggttgccctttt 43334340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 43574685 - 43574742
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||| ||| |||||    
T  43574685 gggaccccttcccggaccctgcgtatgcgggagctttagagcaccgggatgctttttt 43574742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 18684367 - 18684403
Alignment:
Q  34 accctgcgtatgcgggagctttagtgcatcgggttgc 70  Q
    |||||||||||||||||||||||||||||||||||||    
T  18684367 accctgcgtatgcgggagctttagtgcatcgggttgc 18684403  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 41014397 - 41014456
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||||| | |||| || |||||||||||||||||||| ||||||||| ||||||    
T  41014397 gggaccccttcctggaccccgcatatgcgggagctttagtgcaccgggttgcccttttaa 41014456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 4619160 - 4619102
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||| || |||||| ||||||||||||| ||||||||| |||||    
T  4619160 gggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgccctttta 4619102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 8170040 - 8169983
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||| || |||||| ||||||||| ||||    
T  8170040 gggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgccctttt 8169983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 10306530 - 10306493
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttta 56  Q
    |||||||||||||| |||||||||||||||||||||||    
T  10306530 gggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5873378 - 5873326
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||| ||| |||| || |||||||||||||||||||||||||||||| ||||    
T  5873378 gggactcctccccggacactgcgtatgcgggagctttagtgcatcgggatgcc 5873326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 7368475 - 7368527
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| |||| ||||||| ||||||| |||||||||    
T  7368475 gggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcc 7368527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12006384 - 12006332
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||  ||||||| |||||||||||||||||||| || ||||||    
T  12006384 gggaccccttcccagaccctgcctatgcgggagctttagtgcaccgtgttgcc 12006332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 13801823 - 13801771
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||| || |||||| ||||||||||||| |||||||||    
T  13801823 gggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgcc 13801771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 21784388 - 21784336
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||| ||| |||||||||||||||||| ||||||||| || ||||||    
T  21784388 gggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgcc 21784336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 30006404 - 30006460
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttt 75  Q
    ||||||||||||||   |||  ||||||||||||||||||||| |||||||||||||    
T  30006404 gggaccccttcccggggcctatgtatgcgggagctttagtgcaccgggttgcctttt 30006460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 30877620 - 30877568
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| |||| ||||||| ||||||| |||||||||    
T  30877620 gggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcc 30877568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 34154870 - 34154818
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| ||||||| |||| ||||||| |||||||||    
T  34154870 gggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcc 34154818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3771418 - 3771477
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||||||| || ||| ||||| ||||||||||||||| |||| |||| ||||||    
T  3771418 gggaccccttcccggactctgtgtatgtgggagctttagtgcaccgggctgcccttttaa 3771477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 16880701 - 16880654
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    |||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  16880701 gaccacttcccggaccatgcgtatgcgggagctttagtgcaccgggtt 16880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 4654471 - 4654429
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||| |||||| |||||||||| ||||||||||||||||||||    
T  4654471 gggatcccttctcgaaccctgcatatgcgggagctttagtgca 4654429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 13774949 - 13774991
Alignment:
Q  24 cccttcccgaaccctgcgtatgcgggagctttagtgcatcggg 66  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||    
T  13774949 ccctttccggaccctgcgtatgcgggagctttagtgcaccggg 13774991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 19142999 - 19142957
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||| ||| |||||||||||||| |||||||||    
T  19142999 gggaccccttcccggaccatgcgtatgcgggagatttagtgca 19142957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 22187368 - 22187418
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||| |||||| | ||||| |||||||||||||||| |||||||    
T  22187368 gaccccttcccaaaccctacatatgcaggagctttagtgcatcaggttgcc 22187418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 22861725 - 22861683
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  22861725 gggaccccttctcgaaccctgcatatgcgggagctctagtgca 22861683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 29334475 - 29334541
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaacataatt 85  Q
    ||||||| |||||| |||||||||||| |||| ||||| |||| |||| |||| ||||||| |||||    
T  29334475 gggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggctgcccttttaacttaatt 29334541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 10943900 - 10943844
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||  ||||||||||||||||||| |||| |||| ||||    
T  10943900 gggaccccttcccggaccctgca-atgcgggagctttagtgcaccgggctgccctttt 10943844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 29184098 - 29184065
Alignment:
Q  38 tgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||||||||||||| |||||||||    
T  29184098 tgcgtatgcgggagctttagtgcaccgggttgcc 29184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 35710390 - 35710447
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| | | ||| |||||||||||| ||||||| ||||||||| ||||    
T  35710390 gggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggttgccctttt 35710447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 1565511 - 1565562
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| |||| |||||| |||||||| |||||||||    
T  1565511 gggaccccttcccggaccctgcatatgtgggagc-ttagtgcaccgggttgcc 1565562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12575716 - 12575664
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||| | ||||||||||||| |||||||| ||||| |||| ||||    
T  12575716 gggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcc 12575664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20135685 - 20135737
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||| || ||||| ||||||| |||||| |||||||||    
T  20135685 gggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggttgcc 20135737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 28817682 - 28817625
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  28817682 gggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgccctttt 28817625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 27507989 - 27508039
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27507989 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccgggttg 27508039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 18595918 - 18595974
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  18595918 ggaccccttcccggaccctgtgtatgcgggagttttagtgcatcgggttgccttttt 18595974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 39461048 - 39460992
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  39461048 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 39460992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 12625969 - 12626027
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  12625969 gggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 12626027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 35261758 - 35261815
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||| | |||||||||||||||||||||||||||| ||||||||| ||||    
T  35261758 gggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 35261815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 20284125 - 20284075
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg 69  Q
    |||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  20284125 gggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 20284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 21070753 - 21070703
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg 69  Q
    |||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  21070753 gggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 21070703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 27468141 - 27468091
Alignment:
Q  26 cttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 27468091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 36720875 - 36720933
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | ||||||| |||||    
T  36720875 gggaccccttcccggaccctgcgtatgcggaagctttagtgcacccggttgccctttta 36720933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 44530228 - 44530278
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg 69  Q
    |||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  44530228 gggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttg 44530278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 17823658 - 17823707
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  17823658 accccttcccgaaccctgcatatgcaggagctttagtgcaccgggttgcc 17823707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 18164808 - 18164759
Alignment:
Q  27 ttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  18164808 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccatttt 18164759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 25250603 - 25250660
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||||||| || |||||||||| ||||||||| ||||||||| ||||    
T  25250603 gggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgccctttt 25250660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 26102596 - 26102653
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  26102596 gggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgccctttt 26102653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 30454153 - 30454096
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  30454153 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30454096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 31457252 - 31457309
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||| ||||| |||||    
T  31457252 ggaccccttcccaaaccctgcgtatgcgggagctctagtgcaccggattgccctttta 31457309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 13160780 - 13160832
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||||||||||||||||| |||||  |||||||||    
T  13160780 gggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcc 13160832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 28407482 - 28407534
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||| ||||||||||||||||| |||| |||||||||    
T  28407482 gggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgcc 28407534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 45071343 - 45071395
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||| ||||||||||||||||| |||||| |||||||||    
T  45071343 gggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgcc 45071395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 29877173 - 29877215
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  29877173 gggaccccttcccggaccctgcgtatgcgggagcgttagtgca 29877215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 6760903 - 6760960
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| || |||| || |||||||||||||||||||| ||||||||| ||||    
T  6760903 gggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 6760960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 7136583 - 7136534
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    |||||||||||||| |||| || |||||||||||||||||||| ||||||    
T  7136583 gggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggtt 7136534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 8897820 - 8897763
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| | ||||||| ||||    
T  8897820 gggaccccttcccggaccctgcatatgcgggagctttactgcacccggttgccctttt 8897763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 10857908 - 10857965
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||| ||||| | ||| |||||||||||||||||||||||| ||||||||| ||||    
T  10857908 gggaccacttcctggaccttgcgtatgcgggagctttagtgcaccgggttgccctttt 10857965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 12670306 - 12670257
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||    
T  12670306 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggtt 12670257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 16013537 - 16013594
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg-ccttttta 77  Q
    |||||||||||  ||||||| |||||||||||||||||||| ||||||| ||||||||    
T  16013537 gaccccttcccagaccctgcctatgcgggagctttagtgcaccgggttgtccttttta 16013594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 20870004 - 20870061
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||| | |||| || |||||||||||||||||||| ||||||||| ||||    
T  20870004 gggaccccttccaggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 20870061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 33867038 - 33867083
Alignment:
Q  26 cttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||    
T  33867038 cttcccgaaccctgcgtatgcagaagctttagtgcaccgggttgcc 33867083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 35107367 - 35107310
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| || ||| |||||||| |||||||||||| ||||||||| ||||    
T  35107367 gggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgccctttt 35107310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 5689713 - 5689761
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgc 70  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||| ||||    
T  5689713 accccttcccgaaccatgcgtatgtgggagctttagtgcaccggtttgc 5689761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 17250931 - 17250880
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||| |||||||||||||||||||  |||||||||||||| |||||||||    
T  17250931 gggaccctttcccgaaccctgcgtatgaaggagctttagtgca-cgggttgcc 17250880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 29521726 - 29521690
Alignment:
Q  34 accctgcgtatgcgggagctttagtgcatcgggttgc 70  Q
    |||||||||||||||||||||||||||| ||||||||    
T  29521726 accctgcgtatgcgggagctttagtgcaccgggttgc 29521690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42083754 - 42083702
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||||||||||||| ||| | |||||||||||||||| ||| ||||    
T  42083754 gggaccccttcccgaaccctgtgtacgtgggagctttagtgcattgggctgcc 42083702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 16225100 - 16225150
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg 69  Q
    |||| ||||||||| |||| || |||||||||||||||||||| |||||||    
T  16225100 gggatcccttcccggaccccgcatatgcgggagctttagtgcaccgggttg 16225150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 44781560 - 44781518
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||| ||||  ||||||||||||||||||||||||||||    
T  44781560 gggaccccgtcccagaccctgcgtatgcgggagctttagtgca 44781518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 5135345 - 5135289
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||||||||| |||||||| ||||| |||| |||| ||||    
T  5135345 gggaccccttcccggaccctgcgtatgcaggagcttt-gtgcaccgggctgccctttt 5135289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 24245528 - 24245565
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttta 56  Q
    |||||||||||| | |||||||||||||||||||||||    
T  24245528 gggaccccttcctggaccctgcgtatgcgggagcttta 24245565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 24365115 - 24365079
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttt 55  Q
    |||||||||||||| |||||||||||| |||||||||    
T  24365115 gggaccccttcccggaccctgcgtatgtgggagcttt 24365079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 36486622 - 36486570
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||| ||||||| ||| ||||||||| |||||||||||||  |||||||||    
T  36486622 gggacctcttcccggaccttgcgtatgcaggagctttagtgccccgggttgcc 36486570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 40444843 - 40444887
Alignment:
Q  17 cagggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||| ||| ||||||||||||  ||||||||||||||    
T  40444843 cagggaccccttgccggaccctgcgtatgttggagctttagtgca 40444887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 13628846 - 13628788
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  13628846 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 13628788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 40272868 - 40272811
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  40272868 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 40272811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 54484792 - 54484849
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  54484792 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 54484849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 516513 - 516570
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||||    
T  516513 gggaccccttccccgaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 10484671 - 10484614
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 10484614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 829498 - 829456
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  829498 gggaccccttcccgaaccctgcgtatgcaggagctttagtgca 829456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 25517226 - 25517168
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| | ||||||||||| |||||||||||||| ||||||||| |||||    
T  25517226 gggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgccctttta 25517168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 29366776 - 29366718
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||||||||||| |||||||||||||||  |||||||| |||||    
T  29366776 gggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgccctttta 29366718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 30452896 - 30452954
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| |||||    
T  30452896 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 30452954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 40390353 - 40390399
Alignment:
Q  30 ccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  40390353 ccgaaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 40390399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 1217189 - 1217246
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  1217189 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1217246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 5173771 - 5173718
Alignment:
Q  23 ccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||    
T  5173771 ccccttcccggaccttgcgtatgcgggagctttagtgcaccgggttgccctttt 5173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 13730658 - 13730601
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||| || |||||||||||||||||||| ||||||||| ||||    
T  13730658 gggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 13730601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 24851357 - 24851300
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| | ||||| |||||||||||||||||||| ||||||||| ||||    
T  24851357 gggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgccctttt 24851300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 47624208 - 47624257
Alignment:
Q  27 ttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 47624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 52926275 - 52926218
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||| |||||||| |||||||||||||||||||||||| ||| ||||||||| ||||    
T  52926275 gggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctttt 52926218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 353405 - 353353
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||| || |||||||||||||||||||| |||||||||    
T  353405 gggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcc 353353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22609866 - 22609918
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||| ||||||||||||||||| |||||| |||||||||    
T  22609866 gggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgcc 22609918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 39203615 - 39203667
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||| ||| |||||||||||||||||||| |||||||||    
T  39203615 gggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcc 39203667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 45786270 - 45786218
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||| |||| |||||||||||||| |||||||||    
T  45786270 gggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggttgcc 45786218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 14266423 - 14266376
Alignment:
Q  24 cccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  14266423 cccttcctgaaccctgcgtatgcgggagctttagtgcactgggttgcc 14266376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 54032612 - 54032569
Alignment:
Q  34 accctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  54032612 accctgcgtatgcgggagctttagtgcaccgggttgccctttta 54032569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 4495717 - 4495675
Alignment:
Q  34 accctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  4495717 accctgcgtatgcgggagctttagtgcaccgggttgccctttt 4495675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 45948894 - 45948852
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  45948894 gggaccccttctcggaccctgcgtatgcgggagctttagtgca 45948852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 46421091 - 46421033
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttt-agtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||| |||||| ||| ||||| ||||    
T  46421091 gggaccccttcccggaccctgcgtatgcgggagctttaagtgcaccggtttgccctttt 46421033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 15797321 - 15797378
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||| ||||||| ||||||| ||||||||| ||||    
T  15797321 gggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgccctttt 15797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 26869807 - 26869864
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||| ||| ||| |||||||||||||||||| ||||| ||||||||| ||||    
T  26869807 gggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgccctttt 26869864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 34771420 - 34771363
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| |||| |||| ||||    
T  34771420 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgccctttt 34771363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 44403611 - 44403554
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||| ||||||| | |||||||||||| |||| |||||||||    
T  44403611 gggaccccttcccggaccctacgtatgctgaagctttagtgcaccgggctgccttttt 44403554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 49013529 - 49013472
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||| || || ||||||||||||||||| ||||||||| ||||    
T  49013529 gggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggttgccctttt 49013472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10795479 - 10795427
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||| | ||||||||||||||||||||| |||||| | |||||||    
T  10795479 gggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcc 10795427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 22122973 - 22122921
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| |||||| ||||| ||||||| |||||||||    
T  22122973 gggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgcc 22122921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 31592948 - 31593000
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||| |||||||| ||||||| |||||||||||| ||||||| |||||||||    
T  31592948 gggactccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 31593000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 26292431 - 26292490
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg-ccttttta 77  Q
    |||| ||||||||||||||||| ||||||||| || ||||||| ||||||| ||||||||    
T  26292431 gggatcccttcccgaaccctgcatatgcgggaactctagtgcaccgggttgtccttttta 26292490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 43114908 - 43114869
Alignment:
Q  35 ccctgcgtatgcgggagctttagtgcatcgggttgccttt 74  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  43114908 ccctgcgtatgcgggagctttagtgcattggattgccttt 43114869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 54374401 - 54374362
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagt 58  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  54374401 gggaccccttcccggaccctgcatatgcgggagctttagt 54374362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 6411878 - 6411836
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||  ||| ||||||||||||||||||||||||    
T  6411878 gggaccccttcccagaccttgcgtatgcgggagctttagtgca 6411836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 7943110 - 7943148
Alignment:
Q  38 tgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  7943110 tgcgtatgcgggagctttagtgcactgggttgccttttt 7943148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 16735541 - 16735599
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| || |||||||||||| ||||| ||||||  |||||||| |||||    
T  16735541 gggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttta 16735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 26573228 - 26573270
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||| ||||| |||||||||||||| |||||||||||||    
T  26573228 gggaccccatcccggaccctgcgtatgcgtgagctttagtgca 26573270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 34420699 - 34420657
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||| ||| |||||||| |||||||||||||||    
T  34420699 gggaccccttcccggaccttgcgtatgtgggagctttagtgca 34420657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 8247743 - 8247706
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttta 56  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  8247743 gggactccttcccggaccctgcgtatgcgggagcttta 8247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 14987060 - 14987109
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    ||||||| |||||| ||| ||| |||||||||||||||||||| ||||||    
T  14987060 gggacccattcccggaccttgcatatgcgggagctttagtgcaccgggtt 14987109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 53996621 - 53996564
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||  || ||||||||| ||||||||||||||| |||| |||| ||||    
T  53996621 gggaccccttccctgacactgcgtatgtgggagctttagtgcaccgggctgccctttt 53996564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 12914089 - 12914033
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||  ||||||| ||||||||||||| | |||| ||||||||| |||||    
T  12914089 gaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgccctttta 12914033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 35418005 - 35418057
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||| ||  ||||| |||||||||||||||||| ||||    
T  35418005 gggaccccttcccggaccccgcaaatgcgagagctttagtgcatcgggctgcc 35418057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 9671258 - 9671316
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  9671258 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 9671316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 10546242 - 10546299
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  10546242 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10546299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 10543779 - 10543831
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  10543779 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 10543831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 14530399 - 14530451
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  14530399 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 14530451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 8455372 - 8455314
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||    
T  8455372 gggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgccctttta 8455314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 39914361 - 39914304
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  39914361 gggaccccttcctga-ccctgcgtatgcgggagctttagtgcatcgggttgccctttta 39914304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 14444807 - 14444864
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||    
T  14444807 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccctttt 14444864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 25249794 - 25249737
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  25249794 gggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctttt 25249737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34766334 - 34766383
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  34766334 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggtt 34766383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 124962 - 124914
Alignment:
Q  27 ttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttt 75  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcctttt 124914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 40579805 - 40579753
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  40579805 gggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgcc 40579753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 23488562 - 23488613
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgc 70  Q
    |||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  23488562 gggaccccttcccggaccctgcgtatgcgagagctttagtgcaccgggttgc 23488613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 21779317 - 21779259
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| |||||    
T  21779317 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 21779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 22371199 - 22371249
Alignment:
Q  27 ttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 22371249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 24860041 - 24859987
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||| || |||||||||||||||||||||||||||| ||| ||||||||||    
T  24860041 accccttctcggaccctgcgtatgcgggagctttagtgcaccggattgccttttt 24859987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 34080180 - 34080238
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||||||| |||||||||| ||||||||| ||||||||| |||||    
T  34080180 gggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgccctttta 34080238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 17896339 - 17896396
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| || |||||||||||| |||||||||||||||||| |||||| ||||    
T  17896339 gggaccccttctcggaccctgcgtatgtgggagctttagtgcatcgagttgccctttt 17896396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 19615073 - 19615114
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  19615073 ggaccccttcccgaaccctgcgtatgcaggagctttagtgca 19615114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 36871571 - 36871627
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||    
T  36871571 gggaccccttcccggacc-tgcgtatgcgggagctttagtgcaccgggttgccctttt 36871627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 25079773 - 25079721
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||    
T  25079773 gggaccccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcc 25079721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 41409941 - 41409993
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  41409941 gggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgcc 41409993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 8575975 - 8576026
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||||| |||||||||||| ||||||||||||||| | |||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcaccaggttgcc 8576026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 26684676 - 26684617
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg-ccttttta 77  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||    
T  26684676 gggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccggattgtccttttta 26684617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 44643602 - 44643661
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||||||  ||||||||||||||||||| |||||||| |||| |||| ||||||    
T  44643602 gggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgcccttttaa 44643661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 5841109 - 5841167
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||| || |||||||||||||||||||| || |||||| |||||    
T  5841109 gggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttta 5841167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 17668084 - 17668138
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||| ||||||||||||||  ||||||||||||||| ||||||||| ||||    
T  17668084 accccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgccctttt 17668138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 24890490 - 24890532
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  24890490 gggaccccttcccggaccctgcgtatgcaggagctttagtgca 24890532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 25632594 - 25632640
Alignment:
Q  25 ccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||| | |||||||||||||||||||||| |||||||||    
T  25632594 ccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgcc 25632640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 11514519 - 11514572
Alignment:
Q  24 cccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    ||||||||  |||||||||||||||||||||||||||| ||| ||||| |||||    
T  11514519 cccttcccagaccctgcgtatgcgggagctttagtgcaccggattgccctttta 11514572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 14544146 - 14544187
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  14544146 ggaccccttccgggaccctgcgtatgcgggagctttagtgca 14544187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 27573707 - 27573756
Alignment:
Q  27 ttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||| ||||    
T  27573707 ttcccaaaccctgtgtatgtgggagctttagtgcatcgggttgccctttt 27573756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 13245151 - 13245099
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||| ||| ||| |||||||||||||| |||||||||||    
T  13245151 gggaccccttcccggaccatgcatatacgggagctttagtgtatcgggttgcc 13245099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 21377129 - 21377093
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttt 55  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21377129 gggaccccttcccgaaccctgcgtatgtgggagcttt 21377093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 25641580 - 25641620
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtg 59  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  25641580 gggaccccttcccgaatcctgcgtatgcgagagctttagtg 25641620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 39189555 - 39189503
Alignment:
Q  24 cccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||| |||| || |||||||||||| ||||||| ||||||||||||||    
T  39189555 cccttcccggaccccgcatatgcgggagctctagtgcaccgggttgccttttt 39189503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 40762290 - 40762238
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||| |||| | |||||||||||| ||||||||||||||| |||||||||    
T  40762290 gggaccctttcctggaccctgcgtatgtgggagctttagtgcaccgggttgcc 40762238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 31158495 - 31158456
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagt 58  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  31158495 gggaccccttcccagaccctgcgtatgcgggagctttagt 31158456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 3633762 - 3633712
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||| |||| || |||||||||||||||||||| || ||||||    
T  3633762 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcc 3633712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 17623646 - 17623700
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||| |||||||||| || ||||||||||||  |||||||| ||||    
T  17623646 accccttcccgaatcctgcgtatgtggaagctttagtgcactgggttgccctttt 17623700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 19185796 - 19185754
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcg 64  Q
    ||||||||| | ||||||||||||||||||||||||| |||||    
T  19185796 accccttcctggaccctgcgtatgcgggagctttagtacatcg 19185754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 19977770 - 19977728
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  19977770 gggatcccttcccgaaccttgtgtatgcgggagctttagtgca 19977728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 22363549 - 22363507
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatc 63  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||    
T  22363549 gaccctttctcgaaccctgcgtacgcgggagctttagtgcatc 22363507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 24200679 - 24200622
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||| ||||||||| |||||| ||||| | ||||||||||||| ||||||||| ||||    
T  24200679 gggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgccctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 4516407 - 4516367
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtg 59  Q
    |||||||||||||| |||||||||||| || ||||||||||    
T  4516407 gggaccccttcccggaccctgcgtatgtggaagctttagtg 4516367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 23397843 - 23397895
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||| || ||||| | |||||||||||| ||||||| |||||||||    
T  23397843 gggaccccttctcggaccctacatatgcgggagctctagtgcaccgggttgcc 23397895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 24059052 - 24059012
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtg 59  Q
    |||||||||| ||| |||||||||||| |||||||||||||    
T  24059052 gggacccctttccggaccctgcgtatgtgggagctttagtg 24059012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 31821399 - 31821343
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttt 75  Q
    |||||||||| ||||| |||| |||||||||||||||| |||| | || ||||||||    
T  31821399 gggacccctttccgaaacctgtgtatgcgggagctttaatgcacctggctgcctttt 31821343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 24828 - 24771
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  24828 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcagccggttgccctttt 24771  T

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Target: scaffold0057; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 46910 - 46967
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  46910 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 46967  T

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Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 46763 - 46719
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatc 63  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  46763 gggaccccttcccagaccctgcgtatgcgggagctttaatgcatc 46719  T

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Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 29355911 - 29355854
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  29355911 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 29355854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 6808474 - 6808531
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||    
T  6808474 gggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttt 6808531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 1354813 - 1354754
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||||    
T  1354813 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttaa 1354754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 12885992 - 12886051
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||||||  |||||||||||| ||||||||||||||| ||||||||| ||||||    
T  12885992 gggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgcccttttaa 12886051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 12221971 - 12221913
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagc-tttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||||    
T  12221971 gggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 12221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 26097236 - 26097294
Alignment:
Q  18 agggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  26097236 agggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 26097294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 30786427 - 30786373
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||    
T  30786427 accccttcctggaccgtgcgtatgcgggagctttagtgcaccgggttgccttttt 30786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 1347041 - 1347098
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  1347041 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1347098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 12892088 - 12892145
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||| || |||||||||||||||||||| ||||||||| ||||    
T  12892088 gggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 12892145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 13267804 - 13267861
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||| | ||||||||||||||||||||| |||||| ||||||||| ||||    
T  13267804 gggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgccctttt 13267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 14975146 - 14975094
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||||||||||| || |||||||||| ||||||||| |||||||||    
T  14975146 gggaccccttcccgaaccccgcatatgcgggagttttagtgcaccgggttgcc 14975094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 23930183 - 23930125
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    ||||||||||| || ||||||| |||||||||||||||||||| || |||||| |||||    
T  23930183 gggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctttta 23930125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 25557805 - 25557859
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  25557805 accccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 25557859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 3815133 - 3815084
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    ||||||| |||||||||||| ||||||||| |||||||||||| ||||||    
T  3815133 gggaccctttcccgaaccctacgtatgcggaagctttagtgcaccgggtt 3815084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 9161203 - 9161260
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| || ||||||||||||||| |||||||||||| | ||||||| ||||    
T  9161203 gggaccccttctcggaccctgcgtatgcggaagctttagtgcaccaggttgccctttt 9161260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 10734957 - 10734909
Alignment:
Q  23 ccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||| ||||||||||||||||||||||||| || |||| ||||    
T  10734957 ccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcc 10734909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 24097656 - 24097696
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtg 59  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  24097656 gggaccccttcccggaccctgcgtatgcggaagctttagtg 24097696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 11395840 - 11395879
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagt 58  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  11395840 gggaccccttcccggatcctgcgtatgcgggagctttagt 11395879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 34850618 - 34850665
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttg 69  Q
    ||||||||||||| |||||||||   ||||||||||||||||||||||    
T  34850618 accccttcccgaatcctgcgtatataggagctttagtgcatcgggttg 34850665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 2166466 - 2166409
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||   ||| |||||||||||||||| ||||||||| ||||    
T  2166466 gggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttt 2166409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 2178099 - 2178042
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||   ||| |||||||||||||||| ||||||||| ||||    
T  2178099 gggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttt 2178042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 3116185 - 3116128
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| || ||| ||||||||||||||||||||| || ||| ||||| ||||    
T  3116185 gggaccccttctcggaccttgcgtatgcgggagctttagtacaccggattgccctttt 3116128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 383816 - 383764
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||| |  ||||||||||||||||||||| ||| || |||||||||    
T  383816 gggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcc 383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 9671139 - 9671083
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||| |||||||||||  || ||||||||||| ||||||||| |||| ||||    
T  9671139 ggacccctttccgaaccctgcaaatacgggagctttaatgcatcgggctgccctttt 9671083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 29016337 - 29016301
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagcttta 56  Q
    ||||||||||||  |||||||||||||||||||||||    
T  29016337 ggaccccttcccagaccctgcgtatgcgggagcttta 29016301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 7909337 - 7909284
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgc-gggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7909337 gggaccccttcccgaaccctgcgtatgcggggagctttagtgcatcgggttgcc 7909284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 20639714 - 20639657
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  20639714 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 20639657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 33836543 - 33836486
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  33836543 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgccctttt 33836486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 38755964 - 38755912
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  38755964 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 38755912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44363186 - 44363134
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  44363186 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 44363134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 20908692 - 20908650
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20908692 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 20908650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 40553991 - 40553941
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  40553991 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 40553941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 23501868 - 23501925
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||    
T  23501868 gggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 23501925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 32484312 - 32484369
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||    
T  32484312 gggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 32484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 35567249 - 35567306
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  35567249 gggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgccctttt 35567306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 11394931 - 11394983
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  11394931 gggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 11394983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 11404658 - 11404710
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  11404658 gggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 11404710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 21489167 - 21489218
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgc 70  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  21489167 gggaccccttcccgaaccctgcgtatgcgggagctttcgtgcactgggttgc 21489218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 35532077 - 35532128
Alignment:
Q  25 ccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 35532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 30690232 - 30690190
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  30690232 gggaccccttcccggaccctgcgtatgcgggagctttagtgca 30690190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 5648337 - 5648394
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||||||||||||||||| ||||||  |||||||| ||||    
T  5648337 gggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgccctttt 5648394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 13256455 - 13256398
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||||||| || | |||||||||||||||||| ||||||||| ||||    
T  13256455 gggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgccctttt 13256398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 25629128 - 25629185
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||| | |||||||||||||||||||| ||||||||| ||||    
T  25629128 gggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgccctttt 25629185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 30352636 - 30352579
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| || |||||||||||||||||||||||||||| || |||||| ||||    
T  30352636 gggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctttt 30352579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 38786688 - 38786745
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  38786688 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 38786745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6430682 - 6430630
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||| ||||||| |||||||||||||||||||||||| ||| |||||||||    
T  6430682 gggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgcc 6430630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 14983913 - 14983953
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtg 59  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  14983913 gggaccccttcccggaccctgcgtatgcgggagctttagtg 14983953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20225061 - 20225113
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| |||||||||    
T  20225061 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 20225113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20225155 - 20225207
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||| || |||||||||||||||||||| |||||||||    
T  20225155 gggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcc 20225207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20405168 - 20405220
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||| || ||||||||||||||||||||| ||||||||    
T  20405168 gggaccccttcccggaccccgcatatgcgggagctttagtgcattgggttgcc 20405220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25388255 - 25388307
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||    
T  25388255 gggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcc 25388307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 29207954 - 29207902
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| |||||||||    
T  29207954 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 29207902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 30639460 - 30639515
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||| ||||||| ||||||||||||||||||||  |||||||| ||||    
T  30639460 gaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgccctttt 30639515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 49796876 - 49796911
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctt 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  49796876 gggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 54730334 - 54730373
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  54730334 accccttcccggaccctgcgtatgcgggagctttagtgca 54730373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 11054201 - 11054147
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  11054201 accccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 11054147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 16408654 - 16408600
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| |||| || |||||||||||||||||||| ||||||||| ||||    
T  16408654 accccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 16408600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 16911643 - 16911701
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||||||||| ||||||||||||||  | ||||||||| |||||    
T  16911643 gggaccccttcccggaccctgcgtacgcgggagctttagtttaccgggttgccctttta 16911701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 47482906 - 47482864
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||| |||||||||||||||||||||| |||||    
T  47482906 gggaccccttcccggaccctgcgtatgcgggagctttggtgca 47482864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21647045 - 21647097
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||  |||| || |||||||||||||||||||| |||||||||    
T  21647045 gggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 21647097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 40915907 - 40915959
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||| ||||||||| ||||||||||||||||||||| |||||| ||| |||||    
T  40915907 gggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccggattgcc 40915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 44718646 - 44718698
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||  ||||||||||||||||||||||||  || |||||||||    
T  44718646 gggaccccttcccagaccctgcgtatgcgggagctttagcacaccgggttgcc 44718698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 8473678 - 8473624
Alignment:
Q  19 gggaccccttccc--gaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||  || |||||| |||||||||||||||||||| |||||||||    
T  8473678 gggaccccttccccggacccctgcatatgcgggagctttagtgcaccgggttgcc 8473624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 37038172 - 37038137
Alignment:
Q  26 cttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37038172 cttcccgtaccctgcgtatgcgggagctttagtgca 37038137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 51865090 - 51865035
Alignment:
Q  23 ccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||| ||||||||||||||||||||||| |||| |||  |||| ||||||    
T  51865090 ccccttcccggaccctgcgtatgcgggagctttattgcaccggactgcccttttaa 51865035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 39077837 - 39077795
Alignment:
Q  34 accctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||    
T  39077837 accctgcatatgcgggagctctagtgcaccgggttgccttttt 39077795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 50555709 - 50555655
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| ||||||||||||| |||| ||||||||| |||| |||| ||||    
T  50555709 accccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgccctttt 50555655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 54175143 - 54175201
Alignment:
Q  19 gggaccccttccc-gaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||| | ||||||| |||||||||||||||||||| |||| |||| ||||    
T  54175143 gggaccccttccccggaccctgcatatgcgggagctttagtgcaccgggctgccctttt 54175201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 9832369 - 9832312
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| ||||| ||| || ||||||| ||||||||| ||||    
T  9832369 gggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggttgccctttt 9832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 28494230 - 28494287
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||  | ||||| |||||||||||| ||||||| |||| |||||||||    
T  28494230 gggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctgccttttt 28494287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 36816440 - 36816383
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||| |||||| | |||||| ||||||||||||||||||| | ||||||||| ||||    
T  36816440 gggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgccctttt 36816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 47444036 - 47444093
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| ||||| ||||||| ||||||  |||||||| ||||    
T  47444036 gggaccccttcccggaccctgcatatgcaggagcttcagtgcactgggttgccctttt 47444093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 47528586 - 47528529
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||  |||| ||||||| ||||||| ||||||||| ||||    
T  47528586 gggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggttgccctttt 47528529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 48202395 - 48202432
Alignment:
Q  25 ccttcccgaaccctgcgtatgcgggagctttagtgcat 62  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  48202395 ccttaccgaaccccgcgtatgcgggagctttagtgcat 48202432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 48598881 - 48598824
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||| ||| ||||| |||||| ||||||| ||||||||| ||||    
T  48598881 gggaccccttcccggaccatgcatatgccggagctctagtgcaccgggttgccctttt 48598824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 5306720 - 5306659
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatg----cgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||||||||    ||||||||||| |||| ||||||||| ||||    
T  5306720 gggaccccttcccggaccctgcgtatgtggacgggagctttaatgcaccgggttgccctttt 5306659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 8820587 - 8820631
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatc 63  Q
    |||||||||||||  |||||||||||||| ||| |||||||||||    
T  8820587 gggaccccttcccagaccctgcgtatgcgagagttttagtgcatc 8820631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 10660501 - 10660537
Alignment:
Q  36 cctgcgtatgcgggagcttt-agtgcatcgggttgcc 71  Q
    |||||||||||||||||||| ||||||||||||||||    
T  10660501 cctgcgtatgcgggagctttaagtgcatcgggttgcc 10660537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 10874646 - 10874682
Alignment:
Q  36 cctgcgtatgcgggagcttt-agtgcatcgggttgcc 71  Q
    |||||||||||||||||||| ||||||||||||||||    
T  10874646 cctgcgtatgcgggagctttaagtgcatcgggttgcc 10874682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 25463201 - 25463237
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttt 55  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  25463201 gggaccccttcccggaccctgcatatgcgggagcttt 25463237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 32478847 - 32478811
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttt 55  Q
    |||||||||||||| |||| |||||||||||||||||    
T  32478847 gggaccccttcccggacccagcgtatgcgggagcttt 32478811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 36589823 - 36589875
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||| |||||||  ||||||||||||||| ||||| |||| ||||    
T  36589823 gggaccccttcctgaaccctatgtatgcgggagctttggtgcaccgggctgcc 36589875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 56322984 - 56323036
Alignment:
Q  24 cccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||| |||| |  |||||||||||||||||||| ||||||||| ||||    
T  56322984 cccttcccggaccccggatatgcgggagctttagtgcaccgggttgccctttt 56323036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 4349740 - 4349792
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  4349740 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 4349792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 35005227 - 35005286
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||    
T  35005227 gggaccccttcccggaccctgcgtatgcgggcgctttagtgcaccgggttgcccttttaa 35005286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 10668329 - 10668387
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||    
T  10668329 gggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggttgccctttta 10668387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 27474382 - 27474440
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  27474382 gggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctttta 27474440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 6925202 - 6925259
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||    
T  6925202 gggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgagttgccttttt 6925259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 19414539 - 19414600
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaaca 80  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  19414539 gggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgcccttttaaca 19414600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 27201751 - 27201808
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||    
T  27201751 gggaccccttcccggaccttgcgtatgcgggagctttagtgcattgggttgccctttt 27201808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 45812593 - 45812536
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||    
T  45812593 gggaccccttcccaaaccctgcatatgcgggagctctagtgcaccgggttgccttttt 45812536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 46248009 - 46247952
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||    
T  46248009 gggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgccctttt 46247952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 50606505 - 50606562
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||    
T  50606505 gggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 50606562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 45402198 - 45402250
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  45402198 gggaccccttcccagaccctgcgtatgcgggagctttagtgcaccgggttgcc 45402250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 46991906 - 46991958
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  46991906 gggaccccttcccggaccctgcgtatgtgggagctttagtgcaccgggttgcc 46991958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 18944747 - 18944805
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagc-tttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||||    
T  18944747 gggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 18944805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 34725154 - 34725096
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| |||||    
T  34725154 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 34725096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 42304263 - 42304206
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||| ||||| ||||    
T  42304263 gggaccccttcccggaccctgcgtatgtgggagctttagtgcaccggattgccctttt 42304206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 15505666 - 15505702
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttt 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  15505666 gggaccccttcccgaaccctgcgtatgcgggagcttt 15505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 25554796 - 25554756
Alignment:
Q  21 gaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  25554796 gaccccttcccgaaccctgcgtatgcgggagcattagtgca 25554756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 4587619 - 4587568
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgc 70  Q
    |||||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  4587619 gggaccccttcccggaccctgcctatgcgggagcttcagtgcaccgggttgc 4587568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 9939570 - 9939625
Alignment:
Q  23 ccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    ||||||| || |||||||||||||||||||||||||||| |||||| || ||||||    
T  9939570 ccccttctcggaccctgcgtatgcgggagctttagtgcaccgggttacccttttaa 9939625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 14617140 - 14617199
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||| ||||||||| ||||||| |||||||||||||||||||| |||||| || ||||||    
T  14617140 gggatcccttcccggaccctgcatatgcgggagctttagtgcaccgggttacccttttaa 14617199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 19701677 - 19701715
Alignment:
Q  23 ccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  19701677 ccccttcccggaccctgcgtatgcgggagctttagtgca 19701715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 20004146 - 20004088
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||  |||| || |||||||||||||||||||| ||||||||| |||||    
T  20004146 gggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttta 20004088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 30395782 - 30395724
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| |||| || |||||||||||||||||||| || |||||| |||||    
T  30395782 gggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttta 30395724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 33594187 - 33594145
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  33594187 gggaccccttcccagaccctgcgtatgcgggagctttagtgca 33594145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 1517367 - 1517310
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||| |  ||||||||||||| |||||||||||||| ||||||||| ||||    
T  1517367 gggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggttgccctttt 1517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 18742013 - 18741964
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    |||||||||||||  |||||||||||||| ||||||||||||| ||||||    
T  18742013 gggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgggtt 18741964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 35253243 - 35253186
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||| ||||| ||||    
T  35253243 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgccctttt 35253186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 50760287 - 50760239
Alignment:
Q  28 tcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||||||||||||||||| |||| |||| |||| ||||    
T  50760287 tcccgaaccctgcgtatgcgggagctttaatgcaccgggctgccctttt 50760239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 23768376 - 23768325
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgc 70  Q
    ||||| |||||||  |||||||||||||||||||||||||||| ||| ||||    
T  23768376 gggacaccttcccagaccctgcgtatgcgggagctttagtgcagcggattgc 23768325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 30555217 - 30555264
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcggg 66  Q
    ||||||||||| || |||||||||||||| ||||||||||||| ||||    
T  30555217 gggaccccttcacggaccctgcgtatgcgagagctttagtgcaccggg 30555264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 12126893 - 12126851
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||| ||||||| |||||||||||| |||||||    
T  12126893 gggaccccttcccggaccctgcatatgcgggagctgtagtgca 12126851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 20999902 - 20999848
Alignment:
Q  23 ccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||| | |||||||||| ||||||||||||||||| |||| |||| |||||    
T  20999902 ccccttccggcaccctgcgtacgcgggagctttagtgcaccgggctgccctttta 20999848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 32632613 - 32632571
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||    
T  32632613 gggaccccttcccaaaccctgcatatgcgggagcttgagtgca 32632571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 38478335 - 38478281
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||| || ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  38478335 accccttctcggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 38478281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 41319862 - 41319804
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||||||||| | |||||||||| || ||||||  |||||||| |||||    
T  41319862 gggaccccttcccgaacccttcatatgcgggagtttcagtgcactgggttgccctttta 41319804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 22327206 - 22327255
Alignment:
Q  27 ttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||| ||| ||||||||||||||| ||||| |||| |||||||||    
T  22327206 ttcccgaactctgtgtatgcgggagctttggtgcaccgggctgccttttt 22327255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 31382270 - 31382213
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||| | ||||||| ||||||||||||||| || | ||||||||| ||||    
T  31382270 gggaccccttcctggaccctgcatatgcgggagctttactgtaccgggttgccctttt 31382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 43768241 - 43768298
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||  ||||||||||| ||||||||||| |||| |||| |||| ||||    
T  43768241 gggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgccctttt 43768298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 50812043 - 50812084
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||  |||||||||||||||||||||| ||||    
T  50812043 ggaccccttcccgcgccctgcgtatgcgggagctttaatgca 50812084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 8197146 - 8197202
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||| || ||||||||||||  |||||||||||| | ||||||||| ||||    
T  8197146 ggaccccttctcggaccctgcgtatgttggagctttagtgtaccgggttgccctttt 8197202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10378791 - 10378739
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||  | ||||||| |||||||||||||||||||| |||| ||||    
T  10378791 gggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgcc 10378739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 11596614 - 11596650
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttt 55  Q
    |||||||||||| | ||||||||||||||||||||||    
T  11596614 gggaccccttcctggaccctgcgtatgcgggagcttt 11596650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 30682914 - 30682950
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagcttt 55  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  30682914 gggaccccttcccggaccgtgcgtatgcgggagcttt 30682950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 35117822 - 35117774
Alignment:
Q  19 gggaccccttcccgaaccctgcgt-atgcgggagctttagtgcatcggg 66  Q
    |||||||||||||| ||||||||| |||| |||||||||||||| ||||    
T  35117822 gggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccggg 35117774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 39215010 - 39214962
Alignment:
Q  23 ccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||| ||||||||||||| || |||||||||||| |||| ||||    
T  39215010 ccccttcccaaaccctgcgtatgtggaagctttagtgcaccgggctgcc 39214962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 7879717 - 7879774
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||    
T  7879717 gggaccccttcccggaccctgcgtatgcgggagcttcagtgcaccgggttgccctttt 7879774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 34626264 - 34626207
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  34626264 gggatcccttcccggaccctgcgtatgcgggagctttagttcatcgggttgccctttt 34626207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 38262252 - 38262195
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||    
T  38262252 gggaccccttcccgaacactgcgtatgcgggagctttagtgcaccggattgccctttt 38262195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 18747566 - 18747618
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  18747566 gggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgcc 18747618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 21566516 - 21566572
Alignment:
Q  20 ggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||    
T  21566516 ggaccccttcccgaaccctgcatatgcgggagctttagtgcaccgggctaccttttt 21566572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 21172065 - 21172006
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||||    
T  21172065 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttaa 21172006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 23231636 - 23231678
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  23231636 gggaccccttcccgaaccctgcgtatgcggcagctttagtgca 23231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 2541075 - 2541026
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  2541075 gggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggtt 2541026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 27889372 - 27889315
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||||||||||||||||||||| || || ||||||||| ||||    
T  27889372 gggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgccctttt 27889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 32758338 - 32758395
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  32758338 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 32758395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 35334872 - 35334823
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggtt 68  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  35334872 gggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggtt 35334823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 42391156 - 42391099
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  42391156 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 42391099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 42798748 - 42798805
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||||||||||||| ||||    
T  42798748 gggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgccctttt 42798805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 42805605 - 42805662
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| |||| || |||||||||||||||||||| ||||||||| ||||    
T  42805605 gggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 42805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 45018976 - 45018927
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  45018976 accccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgcc 45018927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 18512509 - 18512457
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||||||||||||||||||||| |||||  ||||||||    
T  18512509 gggaccccttcccggaccctgcgtatgcgggagctttggtgcactgggttgcc 18512457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 48735178 - 48735126
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| |||||||||    
T  48735178 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 48735126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 40463955 - 40464014
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttttaa 78  Q
    ||||||||||| || ||||||||||||||||||||| |||||| || |||||| ||||||    
T  40463955 gggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgcccttttaa 40464014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 31591165 - 31591107
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||| ||||||||| |||||    
T  31591165 gggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgccctttta 31591107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 35787325 - 35787267
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||| ||||||||||||||||| | |||| ||||||||| |||||    
T  35787325 gggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgggttgccctttta 35787267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 36602541 - 36602583
Alignment:
Q  34 accctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  36602541 accctgcgtatgcgggagctttagtgcaccgggttgccctttt 36602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 42495913 - 42495876
Alignment:
Q  24 cccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgca 42495876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 47077911 - 47077854
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||| |||||| | |||||||||||| ||||||| ||| ||||||||||    
T  47077911 gggaccccttcccaaaccctacatatgcgggagctctagtgcaccggattgccttttt 47077854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10693129 - 10693077
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| |||||||||||| |||||||  ||||||||    
T  10693129 gggaccccttcccggaccctgcatatgcgggagctctagtgcactgggttgcc 10693077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 11617644 - 11617592
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||| | ||||||||||||| ||| |||||||||| |||||||||    
T  11617644 gggaccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgcc 11617592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 33871966 - 33871910
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttt 75  Q
    |||||||||||||  |||||| ||||||| ||||||||||||| | |||||||||||    
T  33871966 gggaccccttcccagaccctgtgtatgcgagagctttagtgcaccaggttgcctttt 33871910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47716540 - 47716592
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| |||| || |||||||||||||| ||||| |||||||||    
T  47716540 gggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgcc 47716592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 13792206 - 13792164
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||| |||||||||||||||| |||||||| |||||    
T  13792206 gggaccccttctcgaaccctgcgtatgctggagcttttgtgca 13792164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 21139804 - 21139762
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||    
T  21139804 gggaccccttcccgaactctgtgtatgcggaagctttagtgca 21139762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 36267865 - 36267831
Alignment:
Q  27 ttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    ||||||||||||| |||||||||||||||||||||    
T  36267865 ttcccgaaccctgtgtatgcgggagctttagtgca 36267831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 39123974 - 39124016
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||| |||||||||||| ||||||||| |||||    
T  39123974 gggaccccttcccggaccctgcgtatgagggagctttggtgca 39124016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 43557553 - 43557611
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagc-tttagtgcatcgggttgccttttt 76  Q
    |||||||| ||||| || |||||||||||||||| ||||||||| ||||||||| ||||    
T  43557553 gggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgccctttt 43557611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 1408536 - 1408593
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||||||||| | | ||||||| || ||| ||||||||||    
T  1408536 gggaccccttcccggaccctgcgtatgcagaatctttagttcaccggattgccttttt 1408593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 27629713 - 27629770
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    ||||||||||||||  |||||| ||||||| ||||| |||||| ||||||||| ||||    
T  27629713 gggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgccctttt 27629770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 29907499 - 29907549
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||| ||||| ||||||  |||||||||||||||||||| |||||||||    
T  29907499 gggaccccatcccggaccctg--tatgcgggagctttagtgcaccgggttgcc 29907549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 33500594 - 33500635
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgc 60  Q
    |||||||||||||| ||||||||||||||||| ||| |||||    
T  33500594 gggaccccttcccggaccctgcgtatgcgggatcttcagtgc 33500635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 14732871 - 14732835
Alignment:
Q  25 ccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||||  ||||||||||||||||||||    
T  14732871 ccttcccgaaccctgtttatgcgggagctttagtgca 14732835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 24634233 - 24634285
Alignment:
Q  23 ccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttt 75  Q
    ||||||||||||||||| ||||| || |||||||||||| |||| || |||||    
T  24634233 ccccttcccgaaccctgtgtatgtggaagctttagtgcaccgggctgtctttt 24634285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 1643 - 1587
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcctttt 75  Q
    |||||||||||||| |||| ||||||||||||||||||||||| | |||||||||||    
T  1643 gggaccccttcccggacccggcgtatgcgggagctttagtgcaccaggttgcctttt 1587  T

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Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 59058 - 59110
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  59058 gggaccccttcccagactctgcgtatgcgggagctttagtgcatcgggttgcc 59110  T

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Target: scaffold0311 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 10889 - 10940
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgc 70  Q
    |||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  10889 gggaccccttcccggaccctgcgtatgcgggagctttagtgcactgggttgc 10940  T

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Target: scaffold0954 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 3623 - 3665
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgca 61  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  3623 gggaccccttcccgaaccctgcgtatgcggcagctttagtgca 3665  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 48690 - 48632
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttta 77  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| |||||    
T  48690 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 48632  T

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Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 13080 - 13023
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||  |||||||||||||||| ||||||||||| ||||||||| ||||    
T  13080 gggaccccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgccctttt 13023  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 30656 - 30713
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||||    
T  30656 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30713  T

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Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 24189 - 24132
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgccttttt 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||| ||||| ||||    
T  24189 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgccctttt 24132  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 72920 - 72871
Alignment:
Q  22 accccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||||||||| | |||||||||||||||||||||||||| | |||||||    
T  72920 accccttcccggaacctgcgtatgcgggagctttagtgcaccaggttgcc 72871  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 11208 - 11260
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    ||||| |||||||| ||||||| |||||||||||| ||||||| | |||||||    
T  11208 gggacaccttcccggaccctgcatatgcgggagctctagtgcaccaggttgcc 11260  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10106 - 10054
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| ||||| ||||||  |||||| |||||||||    
T  10106 gggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggttgcc 10054  T

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Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 20434 - 20382
Alignment:
Q  19 gggaccccttcccgaaccctgcgtatgcgggagctttagtgcatcgggttgcc 71  Q
    |||||||||||||| ||||||| ||||| ||||||  |||||| |||||||||    
T  20434 gggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggttgcc 20382  T

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