View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20278_low_18 (Length: 258)
Name: NF20278_low_18
Description: NF20278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20278_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26877403 - 26877169
Alignment:
| Q |
1 |
accggactcaacaatggcattgatttgttgacagcggtagtaatttgagaatataaaatatttgattgtgatcacaattgtcggtaacgtacatggacac |
100 |
Q |
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| T |
26877403 |
accggactcaacaatggcattgatttgttgacagcggtagtaatttgagaatataaaatatttgattatgatcacaattgtaggtaacggacatggacac |
26877304 |
T |
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| Q |
101 |
atgtcgaacagcaaacacaacttcgatcatgctgcaaattaaacatccatcacagtaaattcagacaatattttgaactgcacaaacatcatccacttac |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
26877303 |
atgtcgaacaccaaacacaacttcgatcatgctgcaaattaaacatccatcacagtaaattcagacaatattttgaactgcacaaacatcattcacttac |
26877204 |
T |
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| Q |
201 |
agaatcacaaacatgcaatcttgagattgtggagt |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
26877203 |
agaatcacaaacatgcaatcttgagattgtggagt |
26877169 |
T |
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