View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2027_low_13 (Length: 235)

Name: NF2027_low_13
Description: NF2027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2027_low_13
NF2027_low_13
[»] chr3 (51 HSPs)
chr3 (21-102)||(40639519-40639600)
chr3 (166-218)||(37133326-37133378)
chr3 (166-221)||(40639399-40639454)
chr3 (167-203)||(21918780-21918816)
chr3 (166-218)||(27254033-27254085)
chr3 (166-218)||(47891562-47891614)
chr3 (166-218)||(52606177-52606229)
chr3 (166-218)||(53678482-53678534)
chr3 (166-205)||(2078532-2078571)
chr3 (166-205)||(2078770-2078809)
chr3 (166-221)||(5348850-5348905)
chr3 (166-205)||(40639166-40639205)
chr3 (166-205)||(40969304-40969343)
chr3 (166-205)||(46766671-46766710)
chr3 (166-205)||(53678731-53678770)
chr3 (166-216)||(21169715-21169765)
chr3 (166-204)||(33812842-33812880)
chr3 (1-34)||(40639744-40639777)
chr3 (166-215)||(41208450-41208499)
chr3 (166-218)||(46766898-46766951)
chr3 (166-218)||(7937848-7937900)
chr3 (166-218)||(12123364-12123416)
chr3 (166-218)||(35580234-35580286)
chr3 (170-218)||(40926064-40926112)
chr3 (166-205)||(5348628-5348667)
chr3 (167-218)||(28688040-28688091)
chr3 (170-205)||(40969552-40969587)
chr3 (166-221)||(43899356-43899411)
chr3 (166-201)||(51311820-51311855)
chr3 (166-205)||(51883908-51883947)
chr3 (171-221)||(2829690-2829740)
chr3 (166-218)||(10756993-10757045)
chr3 (166-218)||(12123139-12123191)
chr3 (166-218)||(19124238-19124290)
chr3 (166-194)||(19124481-19124509)
chr3 (166-218)||(27940321-27940373)
chr3 (166-194)||(28688299-28688327)
chr3 (166-218)||(28691398-28691450)
chr3 (166-218)||(29248368-29248420)
chr3 (166-218)||(29248593-29248645)
chr3 (167-203)||(33773091-33773127)
chr3 (166-218)||(34521315-34521367)
chr3 (166-218)||(34521542-34521594)
chr3 (166-218)||(34630031-34630083)
chr3 (166-206)||(37133512-37133552)
chr3 (166-194)||(40410761-40410789)
chr3 (166-218)||(43899160-43899212)
chr3 (166-202)||(51885665-51885701)
chr3 (170-218)||(53310007-53310055)
chr3 (166-218)||(54081569-54081621)
chr3 (166-218)||(54107718-54107770)
[»] chr6 (19 HSPs)
chr6 (166-218)||(32283075-32283127)
chr6 (166-218)||(2949576-2949628)
chr6 (166-205)||(7162412-7162451)
chr6 (169-218)||(3289195-3289244)
chr6 (170-218)||(19135731-19135779)
chr6 (166-210)||(24548534-24548578)
chr6 (166-218)||(24605158-24605210)
chr6 (166-218)||(29999688-29999740)
chr6 (166-218)||(33346527-33346579)
chr6 (170-205)||(2315632-2315667)
chr6 (171-218)||(2814596-2814643)
chr6 (166-201)||(17544755-17544790)
chr6 (173-218)||(6220341-6220386)
chr6 (166-218)||(3338526-3338578)
chr6 (166-194)||(7537914-7537942)
chr6 (169-205)||(24548293-24548329)
chr6 (166-218)||(33329255-33329307)
chr6 (166-218)||(33972491-33972543)
chr6 (173-205)||(34181953-34181985)
[»] chr7 (23 HSPs)
chr7 (166-221)||(43140747-43140802)
chr7 (166-218)||(2357116-2357168)
chr7 (166-218)||(8769331-8769383)
chr7 (166-218)||(41758728-41758780)
chr7 (166-205)||(15326921-15326960)
chr7 (166-205)||(47305176-47305215)
chr7 (166-203)||(37144063-37144100)
chr7 (169-205)||(22338324-22338360)
chr7 (170-218)||(24119767-24119815)
chr7 (166-218)||(34568632-34568684)
chr7 (166-218)||(36507094-36507146)
chr7 (166-205)||(28349678-28349717)
chr7 (170-205)||(36506865-36506900)
chr7 (166-221)||(47250828-47250883)
chr7 (167-218)||(47305412-47305463)
chr7 (166-216)||(21522504-21522553)
chr7 (166-194)||(8769591-8769619)
chr7 (166-218)||(9230725-9230777)
chr7 (166-218)||(9230962-9231014)
chr7 (166-194)||(23437461-23437489)
chr7 (166-194)||(31715930-31715958)
chr7 (166-218)||(37143813-37143864)
chr7 (166-218)||(38842081-38842132)
[»] chr2 (41 HSPs)
chr2 (166-221)||(44916021-44916076)
chr2 (166-218)||(41659794-41659846)
chr2 (166-221)||(27913943-27913998)
chr2 (169-218)||(35408806-35408855)
chr2 (166-218)||(27883742-27883794)
chr2 (166-218)||(37744498-37744550)
chr2 (166-218)||(39454500-39454552)
chr2 (166-218)||(43183868-43183920)
chr2 (166-205)||(16350126-16350165)
chr2 (166-205)||(44915789-44915828)
chr2 (166-204)||(1580140-1580178)
chr2 (166-216)||(4104208-4104258)
chr2 (166-216)||(17856476-17856526)
chr2 (166-211)||(16350363-16350408)
chr2 (166-203)||(27246283-27246320)
chr2 (169-205)||(1580057-1580093)
chr2 (166-218)||(12304439-12304491)
chr2 (166-218)||(18565115-18565167)
chr2 (166-218)||(25642553-25642605)
chr2 (166-218)||(27132560-27132612)
chr2 (166-218)||(34820564-34820616)
chr2 (166-218)||(36211626-36211678)
chr2 (166-221)||(13354226-13354281)
chr2 (166-221)||(27476649-27476704)
chr2 (166-221)||(33819678-33819732)
chr2 (171-205)||(5720196-5720230)
chr2 (167-216)||(4104446-4104495)
chr2 (167-224)||(13354456-13354513)
chr2 (169-218)||(39150110-39150159)
chr2 (166-218)||(12304070-12304122)
chr2 (166-194)||(15137113-15137141)
chr2 (166-218)||(16655891-16655943)
chr2 (166-218)||(16736150-16736202)
chr2 (166-218)||(21470580-21470632)
chr2 (166-218)||(27883517-27883569)
chr2 (166-218)||(32503822-32503874)
chr2 (166-194)||(36211399-36211427)
chr2 (166-194)||(38275526-38275554)
chr2 (166-218)||(41377403-41377455)
chr2 (166-210)||(44612776-44612820)
chr2 (166-194)||(45389180-45389208)
[»] chr8 (29 HSPs)
chr8 (171-221)||(33542666-33542716)
chr8 (166-218)||(11198490-11198542)
chr8 (166-218)||(30650239-30650291)
chr8 (166-218)||(31230662-31230714)
chr8 (168-205)||(28207051-28207088)
chr8 (169-218)||(30873063-30873112)
chr8 (166-218)||(3868993-3869045)
chr8 (166-218)||(8654221-8654273)
chr8 (166-218)||(11639101-11639153)
chr8 (166-218)||(12873106-12873158)
chr8 (166-206)||(12873343-12873383)
chr8 (166-218)||(14920696-14920748)
chr8 (166-218)||(24456937-24456989)
chr8 (166-218)||(29027253-29027305)
chr8 (166-218)||(39240079-39240131)
chr8 (166-218)||(39912204-39912256)
chr8 (170-205)||(410422-410457)
chr8 (167-218)||(37393762-37393813)
chr8 (167-218)||(40032713-40032764)
chr8 (169-211)||(410654-410696)
chr8 (166-203)||(28206815-28206852)
chr8 (169-218)||(40040214-40040263)
chr8 (166-218)||(1826076-1826128)
chr8 (166-218)||(1860521-1860573)
chr8 (166-206)||(33542433-33542473)
chr8 (166-210)||(35485920-35485964)
chr8 (170-218)||(39240304-39240352)
chr8 (166-218)||(40094524-40094576)
chr8 (166-194)||(44254914-44254942)
[»] chr1 (35 HSPs)
chr1 (166-218)||(20260477-20260529)
chr1 (167-218)||(34621920-34621971)
chr1 (166-221)||(36657549-36657606)
chr1 (166-218)||(16267764-16267816)
chr1 (166-218)||(27209218-27209270)
chr1 (166-218)||(44222241-44222293)
chr1 (166-205)||(4550898-4550937)
chr1 (167-218)||(11394945-11394996)
chr1 (166-218)||(10923411-10923463)
chr1 (166-218)||(13831307-13831359)
chr1 (166-218)||(16267975-16268026)
chr1 (166-206)||(20260676-20260716)
chr1 (166-218)||(32517654-32517706)
chr1 (166-218)||(33753501-33753553)
chr1 (166-210)||(40702914-40702958)
chr1 (166-218)||(50574802-50574854)
chr1 (166-218)||(52412883-52412935)
chr1 (166-205)||(9119341-9119380)
chr1 (166-205)||(27209447-27209486)
chr1 (167-218)||(40533975-40534026)
chr1 (166-216)||(11787789-11787839)
chr1 (166-199)||(4550648-4550681)
chr1 (169-218)||(19886034-19886083)
chr1 (166-218)||(5463403-5463455)
chr1 (166-218)||(10923648-10923700)
chr1 (171-219)||(21036266-21036314)
chr1 (166-210)||(21385229-21385273)
chr1 (166-218)||(22584400-22584452)
chr1 (166-218)||(22584637-22584689)
chr1 (166-194)||(32564008-32564036)
chr1 (166-218)||(34279526-34279578)
chr1 (166-218)||(35986281-35986333)
chr1 (166-194)||(37198981-37199009)
chr1 (166-218)||(37199206-37199258)
chr1 (170-218)||(40534210-40534258)
[»] chr4 (33 HSPs)
chr4 (166-205)||(9657716-9657755)
chr4 (166-218)||(22830845-22830898)
chr4 (166-210)||(10014756-10014800)
chr4 (166-210)||(10021897-10021941)
chr4 (166-218)||(45911628-45911680)
chr4 (166-221)||(9010787-9010842)
chr4 (166-205)||(15985515-15985554)
chr4 (166-205)||(22831096-22831135)
chr4 (166-211)||(8246817-8246862)
chr4 (166-218)||(11102259-11102312)
chr4 (166-218)||(8751336-8751388)
chr4 (166-210)||(25058882-25058926)
chr4 (166-218)||(27347882-27347934)
chr4 (166-218)||(33882234-33882286)
chr4 (166-218)||(48209997-48210049)
chr4 (167-218)||(4965921-4965972)
chr4 (167-218)||(54191638-54191689)
chr4 (167-205)||(44170279-44170317)
chr4 (177-218)||(44710463-44710504)
chr4 (166-218)||(4793884-4793936)
chr4 (166-218)||(21217896-21217948)
chr4 (166-218)||(21218132-21218184)
chr4 (166-218)||(24504225-24504277)
chr4 (166-218)||(25593376-25593428)
chr4 (166-194)||(28570730-28570758)
chr4 (166-218)||(29864460-29864512)
chr4 (166-194)||(34958881-34958909)
chr4 (166-194)||(43317188-43317216)
chr4 (166-218)||(45683166-45683218)
chr4 (166-218)||(45911859-45911911)
chr4 (166-218)||(46200533-46200585)
chr4 (166-218)||(46620976-46621028)
chr4 (166-218)||(52915001-52915053)
[»] chr5 (22 HSPs)
chr5 (166-211)||(41372450-41372495)
chr5 (166-218)||(15476544-15476596)
chr5 (167-218)||(15476316-15476367)
chr5 (168-206)||(5152667-5152705)
chr5 (166-216)||(5624428-5624478)
chr5 (166-203)||(5152915-5152952)
chr5 (166-218)||(334345-334397)
chr5 (166-218)||(7399126-7399178)
chr5 (166-218)||(7399363-7399415)
chr5 (166-218)||(39706336-39706388)
chr5 (166-210)||(42710643-42710687)
chr5 (166-221)||(25923401-25923456)
chr5 (166-221)||(40589336-40589391)
chr5 (166-221)||(40589939-40589994)
chr5 (166-216)||(25923167-25923217)
chr5 (166-218)||(9692967-9693019)
chr5 (166-194)||(12694995-12695023)
chr5 (166-194)||(16353203-16353231)
chr5 (166-218)||(19205228-19205280)
chr5 (166-194)||(26289069-26289097)
chr5 (166-194)||(31909239-31909267)
chr5 (166-218)||(38416192-38416244)
[»] scaffold1436 (1 HSPs)
scaffold1436 (166-210)||(1525-1569)
[»] scaffold0022 (1 HSPs)
scaffold0022 (170-205)||(93241-93276)
[»] scaffold0016 (1 HSPs)
scaffold0016 (166-205)||(91806-91845)
[»] scaffold0809 (2 HSPs)
scaffold0809 (169-218)||(4390-4439)
scaffold0809 (166-211)||(4610-4655)
[»] scaffold0236 (1 HSPs)
scaffold0236 (166-218)||(11262-11314)
[»] scaffold0051 (1 HSPs)
scaffold0051 (166-218)||(40637-40689)
[»] scaffold0045 (2 HSPs)
scaffold0045 (170-218)||(65792-65840)
scaffold0045 (170-218)||(73124-73172)


Alignment Details
Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 40639600 - 40639519
Alignment:
Q  21 caattaaatattatttattgtttaaaaaatgacaccttaaccgtttattcgggaataaaatttatctaactattatcaccaa 102  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40639600 caattaaatattatttattgtctaataaatgacaccttatccgtttattcgggaataaaatttatctaactattatcaccaa 40639519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 37133326 - 37133378
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  37133326 gtcccttaattaaaatttgatttattttggtatcttaacttctcttcgttaca 37133378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 40639454 - 40639399
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||    
T  40639454 gtcccttaattaaaatttgatttatattggtatcttaacttctctctgttacatat 40639399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 21918816 - 21918780
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaa 203  Q
    |||||||||||||||||||||||||||||||||||||    
T  21918816 tcccttaattaaaatttgatttattttgatatcttaa 21918780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 27254033 - 27254085
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  27254033 gtcccttaattaaaatttgatttattttggttccttaacttctctccgttaca 27254085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 47891562 - 47891614
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |||||||||| || | |||||||    
T  47891562 gtcccttaattaaaatttgatttattttggtatcttaacttctattcgttaca 47891614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 52606177 - 52606229
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  52606177 gtcccttaattaaaatttgatttattttggtcccttaacttctctccgttaca 52606229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 53678482 - 53678534
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||||||||||||||||||||||  |||||||||| ||||||||||||    
T  53678482 gtcctttaattaaaatttgatttattttagtatcttaacttctctccgttaca 53678534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 2078532 - 2078571
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  2078532 gtcccttaaataaaatttgatttattttgatatcttaact 2078571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 2078809 - 2078770
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  2078809 gtcccttaattaaaatttgatttattttggtatcttaact 2078770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 5348905 - 5348850
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||| ||||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  5348905 gtcccgtaattaaaatttgatttattttggtattttaacttttctccgttacatat 5348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 40639166 - 40639205
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  40639166 gtcccttaattaaaatttgatttattttggtatcttaact 40639205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 40969304 - 40969343
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  40969304 gtcccttaattaaaatttgatttattttggtatcttaact 40969343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 46766671 - 46766710
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  46766671 gtcccttaattaaaatttgatttattttggtatcttaact 46766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 53678770 - 53678731
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  53678770 gtcccttaattaaaatttgatttattttggtatcttaact 53678731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 21169715 - 21169765
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgtta 216  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||    
T  21169715 gtcccttaattaaaatttgatttattttggtcccttaacttctctccgtta 21169765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 33812880 - 33812842
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaac 204  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  33812880 gtcccttaattaaaatttgatttattttgatctcttaac 33812842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40639777 - 40639744
Alignment:
Q  1 agggtgtagtcgtctcatttcaattaaatattat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  40639777 agggtgtagtcgtctcatttcaattaaatattat 40639744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 41208450 - 41208499
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgtt 215  Q
    ||||||||||||||||||||||||||||| |  ||||||| |||||||||    
T  41208450 gtcccttaattaaaatttgatttattttggtcccttaacttctctccgtt 41208499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 46766951 - 46766898
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaac-tcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||  ||||||||| | ||||||||||||    
T  46766951 gtcccttaattaaaatttgatttatttttgtatcttaactttctctccgttaca 46766898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 7937900 - 7937848
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| || |||||||| | |||||||| ||||||||||||    
T  7937900 gtcccttaattaaaattcgaattattttggtctcttaacttctctccgttaca 7937848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 12123416 - 12123364
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| || |||||||||    
T  12123416 gtcccttaattaaaatttgatttattttggtcccttaacttctttccgttaca 12123364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 35580286 - 35580234
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |   |||||| ||||||||||||    
T  35580286 gtcccttaattaaaatttgatttattttggtcctttaacttctctccgttaca 35580234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 40926064 - 40926112
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||||   |||||| ||||||||||||    
T  40926064 cttaattaaaatttgatttattttgatccattaacttctctccgttaca 40926112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 5348628 - 5348667
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  5348628 gtccctcaattaaaatttgatttattttggtatcttaact 5348667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 28688040 - 28688091
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||||| |  ||||||| ||||||| ||||    
T  28688040 tcccttaattaaaatttgatttattttggtcccttaacttctctccggtaca 28688091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 40969587 - 40969552
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||| ||||||||||    
T  40969587 cttaattaaaatttgatttattttggtatcttaact 40969552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 43899411 - 43899356
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||| ||||||||||| ||||||||||| |  ||||||| |||||||||||||||    
T  43899411 gtcccctaattaaaattcgatttattttggtcccttaacttctctccgttacatat 43899356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 51311855 - 51311820
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatctt 201  Q
    ||||||||||||||||||||||||||||| ||||||    
T  51311855 gtcccttaattaaaatttgatttattttggtatctt 51311820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 51883908 - 51883947
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  51883908 gtcccttaattaaaatttaatttattttggtatcttaact 51883947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 2829740 - 2829690
Alignment:
Q  171 ttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    |||||||||||||||||||||||| |  |||||||  ||||||||||||||    
T  2829740 ttaattaaaatttgatttattttggtcccttaacttttctccgttacatat 2829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 10757045 - 10756993
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||  |||||||||| | |||||| | ||||||||||||    
T  10757045 gtcccttaattaaaattcaatttattttggtctcttaatttctctccgttaca 10756993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 12123139 - 12123191
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| |||| |||||||    
T  12123139 gtcccttaattaaaattcgatttattttggttccttaacttctcttcgttaca 12123191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 19124238 - 19124290
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||| ||||||||||| ||| ||||||||| |||||||| |||| |||||||    
T  19124238 gtcccctaattaaaattcgatctattttgatctcttaacttctcttcgttaca 19124290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 19124509 - 19124481
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  19124509 gtcccttaattaaaatttgatttattttg 19124481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 27940321 - 27940373
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||| ||||||||||||||||| |  || |||| ||||||||||||    
T  27940321 gtcccttaatttaaatttgatttattttggtccctaaacttctctccgttaca 27940373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 28688327 - 28688299
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  28688327 gtcccttaattaaaatttgatttattttg 28688299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 28691450 - 28691398
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||| ||||||||||||||||||||||||   |||||| ||||| ||||||    
T  28691450 gtccctaaattaaaatttgatttattttgatcatttaacttctctctgttaca 28691398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 29248368 - 29248420
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||| |||||||||| |  ||||||| ||||| ||||||    
T  29248368 gtcccttaattaaaatttaatttattttggttccttaacttctctctgttaca 29248420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 29248645 - 29248593
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||||||||||||||| ||||||| |  ||||||| ||||||||||||    
T  29248645 gtcctttaattaaaatttgatctattttggtcccttaacttctctccgttaca 29248593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 33773127 - 33773091
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaa 203  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  33773127 tcccttgattaaaatttgatttattttggtatcttaa 33773091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 34521315 - 34521367
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  34521315 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 34521367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 34521594 - 34521542
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| | |||||| | || |||||||||    
T  34521594 gtcccttaattaaaattcgatttattttggtctcttaatttctttccgttaca 34521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 34630031 - 34630083
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |   |||||| ||||||||||||    
T  34630031 gtcccttaattaaaattcgatttattttggtccattaacttctctccgttaca 34630083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 37133552 - 37133512
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactc 206  Q
    |||||||| ||||||| |||||||||||| |||||||||||    
T  37133552 gtcccttacttaaaatatgatttattttggtatcttaactc 37133512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 40410761 - 40410789
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  40410761 gtcccttaattaaaatttgatttattttg 40410789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 43899160 - 43899212
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  43899160 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 43899212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 51885701 - 51885665
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatctta 202  Q
    |||| |||||||||||||||||||||||| |||||||    
T  51885701 gtcctttaattaaaatttgatttattttggtatctta 51885665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 53310055 - 53310007
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||| |  ||||||| |||||| |||||    
T  53310055 cttaattaaaatttgatttattttggtcccttaacttctctccattaca 53310007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 54081621 - 54081569
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  54081621 gtcccttaattaaaattcgatttattttggttccttaacttctctctgttaca 54081569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 54107718 - 54107770
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |   |||||| ||||||||||||    
T  54107718 gtcccttaattaaaattcgatttattttggtcctttaacttctctccgttaca 54107770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 32283075 - 32283127
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  32283075 gtcccttaattaaaatttgatttattttggtatcttaacttctctccgttaca 32283127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 2949628 - 2949576
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| ||||||    
T  2949628 gtcccttaattaaaatttgatttattttggtctcttaacttctctctgttaca 2949576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 7162412 - 7162451
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  7162412 gtcccttaattaaaatttgatttattttggtatcttaact 7162451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 3289244 - 3289195
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  3289244 ccttaattaaaatttgatttattttggtcccttaacttctctccgttaca 3289195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 19135779 - 19135731
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||| ||||||||||| | |||||||| ||||||||||||    
T  19135779 cttaattaaaattcgatttattttggtctcttaacttctctccgttaca 19135731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 24548578 - 24548534
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||    
T  24548578 gtcctttaattaaaatttgatttattttggtatcttaacttctct 24548534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 24605210 - 24605158
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||||||  ||||||| ||||| ||||||    
T  24605210 gtcccttaattaaaattcgatttattttgatcccttaacttctctctgttaca 24605158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 29999740 - 29999688
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||| ||||||||||||||||||||||| |||||||||| || || ||||||    
T  29999740 gtcccgtaattaaaatttgatttattttggtatcttaacttctatctgttaca 29999688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 33346527 - 33346579
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  33346527 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 33346579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 2315632 - 2315667
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2315632 cttaattaaaatttgatttattttggtatcttaact 2315667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 2814643 - 2814596
Alignment:
Q  171 ttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||| | |||||||| ||||| ||||||    
T  2814643 ttaattaaaatttgatttattttggtttcttaacttctctctgttaca 2814596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 17544790 - 17544755
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatctt 201  Q
    ||||||||||||||||||||||||||||| ||||||    
T  17544790 gtcccttaattaaaatttgatttattttggtatctt 17544755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 6220386 - 6220341
Alignment:
Q  173 aattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||| |  ||||||| ||||||||||||    
T  6220386 aattaaaatttgatttattttggtcccttaacttctctccgttaca 6220341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 3338526 - 3338578
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| |||| |||||||    
T  3338526 gtcccttaattaaaattcgatttattttggtcccttaacttctcttcgttaca 3338578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 7537942 - 7537914
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  7537942 gtcccttaattaaaatttgatttattttg 7537914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 24548293 - 24548329
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  24548293 ccttagttaaaatttgatttattttggtatcttaact 24548329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 33329255 - 33329307
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||| ||||||||    
T  33329255 gtcccttaattaaaattcgatttattttggtcccttaacttctccccgttaca 33329307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 33972543 - 33972491
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||  |||||||||| |  ||||||| ||||||||||||    
T  33972543 gtcccttaattaaaattcaatttattttggtcccttaacttctctccgttaca 33972491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 34181953 - 34181985
Alignment:
Q  173 aattaaaatttgatttattttgatatcttaact 205  Q
    |||||||||||||||||||||| ||||||||||    
T  34181953 aattaaaatttgatttattttggtatcttaact 34181985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 43140747 - 43140802
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||    
T  43140747 gtcccttaattaaaatttgatttattttggtctcttaactcctctctgttacatat 43140802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 2357116 - 2357168
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||| |||||    
T  2357116 gtcccttaattaaaatttgatttattttgatcccttaacttctctccattaca 2357168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 8769331 - 8769383
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  8769331 gtccctgaattaaaatttgatttattttgatcccttaacttctctccgttaca 8769383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 41758728 - 41758780
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||    
T  41758728 gtcccttaattaaaattcgatttattttggtctcttaacttctctccgttaca 41758780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 15326921 - 15326960
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  15326921 gtcccttaattaaaatttgatttattttggtatcttaact 15326960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 47305176 - 47305215
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  47305176 gtcccttaattaaaatttgatttattttggtatcttaact 47305215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 37144100 - 37144063
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaa 203  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  37144100 gtcccttaattaaaatttgatttattttggtatcttaa 37144063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 22338324 - 22338360
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaact 205  Q
    |||||||||||||||||||||||||| ||||||||||    
T  22338324 ccttaattaaaatttgatttattttggtatcttaact 22338360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 24119767 - 24119815
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||| |||||||  ||||||| ||||||||||||    
T  24119767 cttaattaaaatttgatttcttttgatcccttaacttctctccgttaca 24119815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 34568632 - 34568684
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||| |||||||    
T  34568632 gtcccttaattaaaattcgatttattttgatcccttaacttctcttcgttaca 34568684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 36507146 - 36507094
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||| | |||||||||| || || ||||||    
T  36507146 gtcccttaattaaaatttgatttatttcggtatcttaacttctttctgttaca 36507094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 28349717 - 28349678
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  28349717 gtcccttaattaaaatttaatttattttggtatcttaact 28349678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 36506865 - 36506900
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||| ||||||||||    
T  36506865 cttaattaaaatttgatttattttggtatcttaact 36506900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 47250883 - 47250828
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    |||| |||||||||||| ||||||||||| |  ||||||| |||||||||||||||    
T  47250883 gtcctttaattaaaattcgatttattttggtcccttaacttctctccgttacatat 47250828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 47305463 - 47305412
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||| |||||||||| | |||| |||||    
T  47305463 tcccttaattaaaatttaatttattttggtatcttaacttcactccattaca 47305412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 21522553 - 21522504
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgtta 216  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||    
T  21522553 gtcccttaattaaaatttgatttattttggt-ccttaacttctctccgtta 21522504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 8769619 - 8769591
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  8769619 gtcccttaattaaaatttgatttattttg 8769591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 9230725 - 9230777
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  9230725 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 9230777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 9231014 - 9230962
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||| ||||||||||||||| |  ||||||| ||||| ||||||    
T  9231014 gtcccttaattaagatttgatttattttggtcacttaacttctctctgttaca 9230962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 23437489 - 23437461
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  23437489 gtcccttaattaaaatttgatttattttg 23437461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 31715958 - 31715930
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  31715958 gtcccttaattaaaatttgatttattttg 31715930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 37143813 - 37143864
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||| |||| ||||||||||  |||| ||||||    
T  37143813 gtcccttaattaaaatttgattta-tttggtatcttaacttttctctgttaca 37143864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 38842081 - 38842132
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||||||  ||||||| ||||| ||||||    
T  38842081 gtcccttaattaaaattcgatttattttgat-ccttaacttctctctgttaca 38842132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 44916076 - 44916021
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  44916076 gtcccttaattaaaatttcatttattttggtatcttaacttctctccgttacatat 44916021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 41659794 - 41659846
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  41659794 gtcccttaattaaaatttgatttattttggtatcttaacttctctctgttaca 41659846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 27913943 - 27913998
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||    
T  27913943 gtccctttattaaaatttaatttattttgctatcttaacttctctccgttacatat 27913998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 35408855 - 35408806
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  35408855 ccttaattaaaatttgatttattttggtatcttaacttctctctgttaca 35408806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 27883794 - 27883742
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  27883794 gtcccttaattaaaatttgatttattttggtgacttaacttctctccgttaca 27883742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 37744498 - 37744550
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||||||||  ||||||| |||| |||||||    
T  37744498 gtcccttaattaaaatttgatttattttgatcccttaacttctcttcgttaca 37744550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 39454500 - 39454552
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||||||  ||||||| ||||||||||||    
T  39454500 gtcccttaattaaaattcgatttattttgatcccttaacttctctccgttaca 39454552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 43183920 - 43183868
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  43183920 gtcccttaattaaaatttgatttattttggtcccttaacttctctccgttaca 43183868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 16350126 - 16350165
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  16350126 gtcccttaattaaaatttgatttattttggtatcttaact 16350165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 44915789 - 44915828
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  44915789 gtcccttaattaaaatttgatttattttggtatcttaact 44915828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 1580178 - 1580140
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaac 204  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  1580178 gtcccttaattaaaatttgatttattttggtatcttaac 1580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 4104208 - 4104258
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgtta 216  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||    
T  4104208 gtcccttaattaaaattcgatttattttggtatcttaacttctctctgtta 4104258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 17856526 - 17856476
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgtta 216  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| ||||    
T  17856526 gtcccttaattaaaatttgatttattttggtctcttaacttctctctgtta 17856476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 16350408 - 16350363
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctc 211  Q
    ||||||||| ||||||||||||||||||| |||||||||| |||||    
T  16350408 gtcccttaactaaaatttgatttattttggtatcttaacttctctc 16350363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 27246320 - 27246283
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaa 203  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  27246320 gtcccttaattaaaatttgatttattttggtatcttaa 27246283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 1580057 - 1580093
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaact 205  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1580057 ccttaattaaaatttgatttattttggtatcttaact 1580093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 12304491 - 12304439
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||||||||||| ||||||||||| | |||||||| ||||||||||||    
T  12304491 gtcctttaattaaaattcgatttattttggtctcttaacttctctccgttaca 12304439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 18565115 - 18565167
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  18565115 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 18565167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 25642605 - 25642553
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| || |||||||||    
T  25642605 gtcccttaattaaaatttgatttattttggtcccttaacttctttccgttaca 25642553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 27132560 - 27132612
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| |||| |||||||    
T  27132560 gtcccttaattaaaatttgatttattttggtcccttaacttctcttcgttaca 27132612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 34820616 - 34820564
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||| ||||||||||||||||||| |  ||||||| ||||||||||||    
T  34820616 gtcccttaactaaaatttgatttattttggtcccttaacttctctccgttaca 34820564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 36211678 - 36211626
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||| ||||||||||||||||||| |  ||||||| ||||||||||||    
T  36211678 gtcccttaactaaaatttgatttattttggtcccttaacttctctccgttaca 36211626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 13354226 - 13354281
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||||||||||||||| ||||||||||| |  ||||||| |||||| ||||||||    
T  13354226 gtcccttaattaaaattcgatttattttggtcccttaacttctctccattacatat 13354281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 27476704 - 27476649
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| |||||||||    
T  27476704 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttacatat 27476649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 33819732 - 33819678
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    |||| |||||||||||||||||||||||| |  ||||||| |||||||||||||||    
T  33819732 gtcctttaattaaaatttgatttattttggt-ccttaacttctctccgttacatat 33819678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 5720196 - 5720230
Alignment:
Q  171 ttaattaaaatttgatttattttgatatcttaact 205  Q
    |||||||||||||||||||||||| ||||||||||    
T  5720196 ttaattaaaatttgatttattttggtatcttaact 5720230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 4104495 - 4104446
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgtta 216  Q
    |||||||||||||||| ||||||||||| |  ||||||| ||||||||||    
T  4104495 tcccttaattaaaattcgatttattttggttccttaacttctctccgtta 4104446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 13354513 - 13354456
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatatatt 224  Q
    |||||||||||||||| ||||||||||| |  ||||||| |||| ||||||| |||||    
T  13354513 tcccttaattaaaattcgatttattttggtcccttaacttctcttcgttacacatatt 13354456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 39150159 - 39150110
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||| ||||||||||| | |||||||| || |||||||||    
T  39150159 ccttaattaaaattcgatttattttggtctcttaacttctttccgttaca 39150110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 12304122 - 12304070
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||||||||||| ||||||||||| | |||||||| |||| |||||||    
T  12304122 gtcctttaattaaaattcgatttattttggtctcttaacttctcttcgttaca 12304070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 15137141 - 15137113
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  15137141 gtcccttaattaaaatttgatttattttg 15137113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 16655943 - 16655891
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||| ||||||||||||||||||| |  ||||||| ||||||||||||    
T  16655943 gtcctttaactaaaatttgatttattttggtcccttaacttctctccgttaca 16655891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 16736150 - 16736202
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  16736150 gtcccttaattaaaattcgatttattttggtcccttaacttctctcagttaca 16736202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 21470632 - 21470580
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| |||| |||||||    
T  21470632 gtcccttaattaaaattcgatttattttggtcccttaacttctctacgttaca 21470580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 27883517 - 27883569
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||| ||||||| ||||||||||| |  ||||||| ||||||||||||    
T  27883517 gtcccttaagtaaaattcgatttattttggtcccttaacttctctccgttaca 27883569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 32503874 - 32503822
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||||||||||||||||||||||| |  ||||||| || |||||||||    
T  32503874 gtcctttaattaaaatttgatttattttggtcccttaacttctttccgttaca 32503822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 36211399 - 36211427
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  36211399 gtcccttaattaaaatttgatttattttg 36211427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 38275526 - 38275554
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  38275526 gtcccttaattaaaatttgatttattttg 38275554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 41377403 - 41377455
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  41377403 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 41377455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 44612820 - 44612776
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||    
T  44612820 gtcccttaattaaaattcgatttattttggtctcttaacttctct 44612776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 45389180 - 45389208
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  45389180 gtcccttaattaaaatttgatttattttg 45389208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 33542716 - 33542666
Alignment:
Q  171 ttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  33542716 ttaattaaaatttgatttattttgatttcttaacttctctccgttacatat 33542666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 11198542 - 11198490
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  11198542 gtcccttaattaaaatttgatttattttgatcccttaacttctctccgttaca 11198490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 30650239 - 30650291
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  30650239 gtcccttaattaaaatttgatttattttggttccttaacttctctccgttaca 30650291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 31230662 - 31230714
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  31230662 gtcccttaattaaaatttgatttattttggtcccttaacttctctccgttaca 31230714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 28207088 - 28207051
Alignment:
Q  168 cccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  28207088 cccttaattaaaatttgatttattttggtatcttaact 28207051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 30873112 - 30873063
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||  ||||||| || |||||||||    
T  30873112 ccttaattaaaatttgatttattttgatcccttaacttctatccgttaca 30873063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 3868993 - 3869045
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  3868993 gtcccttaattaaaattcgatttattttagtctcttaacttctctccgttaca 3869045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 8654273 - 8654221
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  8654273 gtcctttaattaaaatttgatttattttgctcccttaacttctctccgttaca 8654221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 11639101 - 11639153
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  11639101 gtcccttaattaaaattcgatttattttcgtctcttaacttctctccgttaca 11639153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 12873106 - 12873158
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| ||||||||||||| |||||||||| | |||||||| ||||||||||||    
T  12873106 gtcctttaattaaaatttaatttattttggtttcttaacttctctccgttaca 12873158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 12873383 - 12873343
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactc 206  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  12873383 gtcccttaattaaaatctgatttattttggtatcttaactc 12873343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 14920748 - 14920696
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||| ||||||    
T  14920748 gtcccttaattaaaatttgatttattttggtcccttaacttctctctgttaca 14920696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 24456989 - 24456937
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  24456989 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 24456937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 29027305 - 29027253
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  29027305 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 29027253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 39240079 - 39240131
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||| |||||||    
T  39240079 gtcccttaattaaaattcgatttattttgattccttaacttctcttcgttaca 39240131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 39912256 - 39912204
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| |||||| |||||    
T  39912256 gtcccttaattaaaatttgatttattttggtcccttaacttctctccattaca 39912204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 410422 - 410457
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||| ||||||||||    
T  410422 cttaattaaaatttgatttattttggtatcttaact 410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 37393813 - 37393762
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  37393813 tcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 37393762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 40032764 - 40032713
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||| ||||||||||| | |||||||| ||||| ||||||    
T  40032764 tcccttaattaaaattcgatttattttggtctcttaacttctctctgttaca 40032713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 410696 - 410654
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaactcctctc 211  Q
    |||||||||||||||||||||||||| ||||||| || |||||    
T  410696 ccttaattaaaatttgatttattttggtatcttaccttctctc 410654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 28206815 - 28206852
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaa 203  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  28206815 gtcccttaattaaaatttgatgtattttggtatcttaa 28206852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 40040214 - 40040263
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  40040214 ccttaattaaaattcgatttattttgttcccttaacttctctccgttaca 40040263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 1826128 - 1826076
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  1826128 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 1826076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 1860573 - 1860521
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  1860573 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 1860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 33542433 - 33542473
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactc 206  Q
    |||||||||||||||| |||||||||||| ||| |||||||    
T  33542433 gtcccttaattaaaatctgatttattttggtattttaactc 33542473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 35485920 - 35485964
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    ||||||||||||||||||| ||||||||| ||| |||||| ||||    
T  35485920 gtcccttaattaaaatttgttttattttggtatattaacttctct 35485964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 39240352 - 39240304
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||| |||||||||| | |||||||| || |||||||||    
T  39240352 cttaattaaaatttaatttattttggtctcttaacttctttccgttaca 39240304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 40094524 - 40094576
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||  |||||||||| |  ||||||| ||||||||||||    
T  40094524 gtcccttaattaaaattcaatttattttggttccttaacttctctccgttaca 40094576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 44254914 - 44254942
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  44254914 gtcccttaattaaaatttgatttattttg 44254942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 20260477 - 20260529
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  20260477 gtcccttaattaaaatttgatttattttggtattttaacttctctccgttaca 20260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 34621971 - 34621920
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  34621971 tcccttaattaaaatttgatttattttggtatcttaacttctttccgttaca 34621920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 36657549 - 36657606
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactc--ctctccgttacatat 221  Q
    |||||||||||||||||||||||||||||||  ||||||||  |||||||||||||||    
T  36657549 gtcccttaattaaaatttgatttattttgatcccttaactcctctctccgttacatat 36657606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 16267764 - 16267816
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  16267764 gtcccttaattaaaatttgatttattttggtcccttaacttctctccgttaca 16267816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 27209218 - 27209270
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  27209218 gtcccttaattaaaatttgatttattttggtatcttaacttatcttcgttaca 27209270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 44222241 - 44222293
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||||||  ||||||| ||||||||||||    
T  44222241 gtcccttaattaaaattcgatttattttgatcccttaacttctctccgttaca 44222293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 4550937 - 4550898
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  4550937 gtcccttaattaaaatttgatttattttggtatcttaact 4550898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 11394996 - 11394945
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  11394996 tcccttaattaaaatttgatttattttggtcccttaacttctctccgttaca 11394945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 10923411 - 10923463
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||| |||||||||||||||||||||  |||||||  |||||||||||    
T  10923411 gtcccttaagtaaaatttgatttattttgatcccttaacttttctccgttaca 10923463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 13831359 - 13831307
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  13831359 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 13831307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 16268026 - 16267975
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  16268026 gtcccttaattaaaatttgatttattttggt-ccttaacttctctccgttaca 16267975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 20260716 - 20260676
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactc 206  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  20260716 gtcccttaattaaaatctgatttattttggtatcttaactc 20260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 32517654 - 32517706
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||||||  ||||||| ||||| ||||||    
T  32517654 gtcccttaattaaaattcgatttattttgattccttaacttctctctgttaca 32517706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 33753553 - 33753501
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  33753553 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 33753501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 40702914 - 40702958
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||    
T  40702914 gtccctaaattaaaatttgatttattttggtatcttaacttctct 40702958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 50574854 - 50574802
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||| ||||||    
T  50574854 gtcccttaattaaaatttgatttattttggtcccttaacttctctctgttaca 50574802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 52412935 - 52412883
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||| ||||||    
T  52412935 gtcccttaattaaaatttgatttattttggtcccttaacttctctctgttaca 52412883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 9119341 - 9119380
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  9119341 gtcccttaattaaaatttgatttattttgatcccttaact 9119380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 27209486 - 27209447
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  27209486 gtcctttaattaaaatttgatttattttggtatcttaact 27209447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 40533975 - 40534026
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||| | ||||||||||  ||||| |||||    
T  40533975 tcccttaattaaaatttgatttatttcgctatcttaacttttctccattaca 40534026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 11787789 - 11787839
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgtta 216  Q
    |||||||||||||||||||| |||||||| |  ||||||| ||||||||||    
T  11787789 gtcccttaattaaaatttgaattattttggtcccttaacttctctccgtta 11787839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 4550648 - 4550681
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatc 199  Q
    |||||||||||||||||| |||||||||||||||    
T  4550648 gtcccttaattaaaatttaatttattttgatatc 4550681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 19886034 - 19886083
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||| ||||||||||| | |||||||| ||||| ||||||    
T  19886034 ccttaattaaaattcgatttattttggtctcttaacttctctctgttaca 19886083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 5463455 - 5463403
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||||||||||||||||||||||| |  ||||||| ||||| ||||||    
T  5463455 gtccgttaattaaaatttgatttattttggtcccttaacttctctctgttaca 5463403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 10923700 - 10923648
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| |||| |||||||    
T  10923700 gtcccttaattaaaattcgatttattttggtcccttaacttctcttcgttaca 10923648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 21036314 - 21036266
Alignment:
Q  171 ttaattaaaatttgatttattttgatatcttaactcctctccgttacat 219  Q
    |||||||||||||||||||||||| | ||||||||  |||| |||||||    
T  21036314 ttaattaaaatttgatttattttggtctcttaacttttctctgttacat 21036266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 21385273 - 21385229
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    |||||||||||||||||| ||||||||||||  ||||||| ||||    
T  21385273 gtcccttaattaaaatttaatttattttgatcccttaacttctct 21385229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 22584400 - 22584452
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  22584400 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 22584452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 22584689 - 22584637
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  22584689 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 22584637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 32564008 - 32564036
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  32564008 gtcccttaattaaaatttgatttattttg 32564036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 34279578 - 34279526
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  34279578 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 34279526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 35986281 - 35986333
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||| ||| ||||    
T  35986281 gtcccttaattaaaattcgatttattttggtctcttaacttctcgccgataca 35986333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 37198981 - 37199009
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  37198981 gtcccttaattaaaatttgatttattttg 37199009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 37199258 - 37199206
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||| || |  ||||||| ||||||||||||    
T  37199258 gtcccttaattaaaattcgatttattctggtcccttaacttctctccgttaca 37199206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 40534258 - 40534210
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||| | ||||||||||  ||||| |||||    
T  40534258 cttaattaaaatttgatttatttcggtatcttaacttttctccattaca 40534210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 9657716 - 9657755
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9657716 gtcccttaattaaaatttgatttattttgatatcttaact 9657755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 22830845 - 22830898
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaac-tcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  22830845 gtcccttaattaaaatttgatttattttggtatcttaactttctctccgttaca 22830898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 10014800 - 10014756
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  10014800 gtcccttaattaaaatttgatttattttgatctcttaacttctct 10014756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 10021941 - 10021897
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  10021941 gtcccttaattaaaatttgatttattttgatctcttaacttctct 10021897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 45911628 - 45911680
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  45911628 gtcccttaattaaaatttgatttattttggtcccttaacttctctccgttaca 45911680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 9010842 - 9010787
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||||||||||||||| ||||||||||| |  ||||||| |||||||||||||||    
T  9010842 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttacatat 9010787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 15985515 - 15985554
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  15985515 gtcccttaattaaaatttgatttattttggtatcttaact 15985554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 22831135 - 22831096
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  22831135 gtcccttaattaaaatttgatttattttggtatcttaact 22831096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 8246817 - 8246862
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctc 211  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||    
T  8246817 gtcccttaattaaaatttgatttattttgatcccttaacttctctc 8246862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 11102312 - 11102259
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaac-tcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||  ||||||||| | ||||||||||||    
T  11102312 gtcccttaattaaaatttgatttattttagtatcttaactttctctccgttaca 11102259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 8751336 - 8751388
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||| ||||||| |||||||||||||  ||||||| ||||||||||||    
T  8751336 gtcccttaactaaaattcgatttattttgatcccttaacttctctccgttaca 8751388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 25058882 - 25058926
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||    
T  25058882 gtcccttaattaaaatttgatttattttggtctcttaacttctct 25058926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 27347934 - 27347882
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  27347934 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 27347882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 33882286 - 33882234
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  |||||||  |||||||||||    
T  33882286 gtcccttaattaaaatttgatttattttggtcccttaacttttctccgttaca 33882234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 48209997 - 48210049
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||||||||||||||||   |||||| |||||| |||||    
T  48209997 gtcccttaattaaaatttgatttattttgatcctttaacttctctcccttaca 48210049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 4965921 - 4965972
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||| ||||||    
T  4965921 tcccttaattaaaattcgatttattttgatcccttaacttctctctgttaca 4965972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 54191638 - 54191689
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  54191638 tcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 54191689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 44170317 - 44170279
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaact 205  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  44170317 tcccttaattaaaatttgatttattttggtattttaact 44170279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 44710463 - 44710504
Alignment:
Q  177 aaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||  ||||||| ||||||||||||    
T  44710463 aaaatttgatttattttgatcccttaacttctctccgttaca 44710504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 4793936 - 4793884
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||| ||||||| ||||||||||| |  ||||||| ||||||||||||    
T  4793936 gtcccttaactaaaattcgatttattttggtcccttaacttctctccgttaca 4793884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 21217896 - 21217948
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| || |||||||||    
T  21217896 gtcccttaattaaaattcgatttattttggtcccttaacttctttccgttaca 21217948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 21218184 - 21218132
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  21218184 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 21218132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 24504277 - 24504225
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  24504277 gtcctttaattaaaattcgatttattttggtcccttaacttctctccgttaca 24504225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 25593428 - 25593376
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| || |||||||||    
T  25593428 gtcccttaattaaaattcgatttattttggtcccttaacttctttccgttaca 25593376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 28570758 - 28570730
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  28570758 gtcccttaattaaaatttgatttattttg 28570730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 29864512 - 29864460
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| | |||||||| || || ||||||    
T  29864512 gtcccttaattaaaattcgatttattttggtctcttaacttctatctgttaca 29864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 34958881 - 34958909
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  34958881 gtcccttaattaaaatttgatttattttg 34958909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 43317216 - 43317188
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  43317216 gtcccttaattaaaatttgatttattttg 43317188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 45683166 - 45683218
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||| |||| |||||||||||||||||||||  ||||||| ||||| ||||||    
T  45683166 gtcctttaagtaaaatttgatttattttgatcccttaacttctctctgttaca 45683218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 45911911 - 45911859
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| | ||||| || ||||| ||||||    
T  45911911 gtcccttaattaaaattcgatttattttggtctcttatcttctctctgttaca 45911859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 46200533 - 46200585
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  46200533 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 46200585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 46620976 - 46621028
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |   |||||| ||||||||||||    
T  46620976 gtcccttaattaaaattcgatttattttggtcctttaacttctctccgttaca 46621028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 52915001 - 52915053
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  52915001 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 52915053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 41372495 - 41372450
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctc 211  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  41372495 gtcccttaattaaaatttgatttattttggtatcttaacttctctc 41372450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 15476596 - 15476544
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| | |||||||| |||| |||||||    
T  15476596 gtcccttaattaaaatttgatttattttggtctcttaacttctcttcgttaca 15476544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 15476316 - 15476367
Alignment:
Q  167 tcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| |||||||||| | |||||||| ||||||||||||    
T  15476316 tcccttaattaaaattttatttattttggtctcttaacttctctccgttaca 15476367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 5152667 - 5152705
Alignment:
Q  168 cccttaattaaaatttgatttattttgatatcttaactc 206  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  5152667 cccttaattaaaatttgatttattttggtatcttaactc 5152705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 5624428 - 5624478
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgtta 216  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||    
T  5624428 gtcccttaattaaaatttgatttattttggtcccttaacttctctccgtta 5624478  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 5152952 - 5152915
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaa 203  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  5152952 gtcccttaattaaaatttgatttattttggtatcttaa 5152915  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 334345 - 334397
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| |||||| |||||    
T  334345 gtcccttaattaaaatttgatttattttggtcccttaacttctctcctttaca 334397  T

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Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 7399126 - 7399178
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  7399126 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 7399178  T

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Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 7399415 - 7399363
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||| ||||||    
T  7399415 gtcccttaattaaaatttgatttattttggtcccttaacttctctctgttaca 7399363  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 39706388 - 39706336
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||    
T  39706388 gtcccttaattaaaattcgatttattttggtcccttaacttctctccgttaca 39706336  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 42710687 - 42710643
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||    
T  42710687 gtcccttaattaaaatttgatttattttgatcccttaacttctct 42710643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 25923456 - 25923401
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    |||||||||||||||||  |||||||||| | |||||| | |||||||||||||||    
T  25923456 gtcccttaattaaaattcaatttattttggtctcttaatttctctccgttacatat 25923401  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 40589391 - 40589336
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||||||||||||||| ||||||||||| |   |||||| |||||||||||||||    
T  40589391 gtcccttaattaaaattcgatttattttggtcctttaacttctctccgttacatat 40589336  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 40589994 - 40589939
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttacatat 221  Q
    ||||||||||||||||| ||||||||||| |   |||||| |||||||||||||||    
T  40589994 gtcccttaattaaaattcgatttattttggtcctttaacttctctccgttacatat 40589939  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 25923167 - 25923217
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgtta 216  Q
    |||| |||||||||||| ||||||||||| | |||||||| ||||||||||    
T  25923167 gtcctttaattaaaattcgatttattttggtctcttaacttctctccgtta 25923217  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 9692967 - 9693019
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||| ||| ||||||||||||    
T  9692967 gtcccttaattaaaattcgatttattttggtcccttgacttctctccgttaca 9693019  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 12695023 - 12694995
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  12695023 gtcccttaattaaaatttgatttattttg 12694995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 16353203 - 16353231
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  16353203 gtcccttaattaaaatttgatttattttg 16353231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 19205280 - 19205228
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||| ||||||| ||||||||||||   ||||||| ||||||||||||    
T  19205280 gtcccttaactaaaattcgatttattttgaccccttaacttctctccgttaca 19205228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 26289069 - 26289097
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  26289069 gtcccttaattaaaatttgatttattttg 26289097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 31909267 - 31909239
Alignment:
Q  166 gtcccttaattaaaatttgatttattttg 194  Q
    |||||||||||||||||||||||||||||    
T  31909267 gtcccttaattaaaatttgatttattttg 31909239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 38416192 - 38416244
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||||||||||||  |||||||||| | |||||||| ||||| ||||||    
T  38416192 gtcccttaattaaaattcaatttattttgttttcttaacttctctcggttaca 38416244  T

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Target: scaffold1436 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 1525 - 1569
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctct 210  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||    
T  1525 gtcccttaattaaaatttgatttattttgatcccttaacttctct 1569  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 93241 - 93276
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||| ||||||||||    
T  93241 cttaattaaaatttgatttattttggtatcttaact 93276  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 91845 - 91806
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaact 205  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  91845 gtcccttaattaaaatttgatttattttggtaacttaact 91806  T

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Target: scaffold0809 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 4390 - 4439
Alignment:
Q  169 ccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    |||||||| ||||||||||||||||| | |||||||| | ||||||||||    
T  4390 ccttaattgaaatttgatttattttggtctcttaacttcactccgttaca 4439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 4655 - 4610
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctc 211  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||    
T  4655 gtcccttaattaaaattcgatttattttgatcccttaacttctctc 4610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 11262 - 11314
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |  ||||||| ||||| ||||||    
T  11262 gtcccttaattaaaattcgatttattttggtcccttaacttctctctgttaca 11314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 40689 - 40637
Alignment:
Q  166 gtcccttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||||||| ||||||||||| |   |||||| ||||||||||||    
T  40689 gtcccttaattaaaattcgatttattttggttcattaacttctctccgttaca 40637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 65792 - 65840
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||| |||||||||||||  ||||||| |||||| |||||    
T  65792 cttaattaaaattcgatttattttgatcccttaacttctctccattaca 65840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 73124 - 73172
Alignment:
Q  170 cttaattaaaatttgatttattttgatatcttaactcctctccgttaca 218  Q
    ||||||||||||| |||||||||||||  ||||||| |||||| |||||    
T  73124 cttaattaaaattcgatttattttgatcccttaacttctctccattaca 73172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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