View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20281_high_4 (Length: 416)

Name: NF20281_high_4
Description: NF20281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20281_high_4
NF20281_high_4
[»] chr6 (20 HSPs)
chr6 (17-404)||(31500118-31500505)
chr6 (17-404)||(31494732-31495119)
chr6 (17-404)||(31514645-31515008)
chr6 (17-348)||(31473528-31473853)
chr6 (71-407)||(7847872-7848217)
chr6 (71-404)||(14745087-14745424)
chr6 (88-342)||(22396670-22396918)
chr6 (178-390)||(27122148-27122370)
chr6 (341-404)||(31475220-31475283)
chr6 (43-120)||(14745338-14745415)
chr6 (108-207)||(10907232-10907332)
chr6 (113-208)||(8404235-8404331)
chr6 (113-234)||(21038167-21038288)
chr6 (51-134)||(7848117-7848200)
chr6 (113-234)||(21083788-21083908)
chr6 (335-404)||(8885585-8885654)
chr6 (71-233)||(9190594-9190756)
chr6 (58-134)||(22396677-22396753)
chr6 (190-233)||(19548079-19548122)
chr6 (149-208)||(10641811-10641870)
[»] chr4 (11 HSPs)
chr4 (43-407)||(6820847-6821220)
chr4 (187-389)||(17418118-17418329)
chr4 (187-404)||(3576630-3576856)
chr4 (187-342)||(19728784-19728933)
chr4 (113-234)||(15873344-15873465)
chr4 (71-170)||(6821130-6821229)
chr4 (149-208)||(16285528-16285587)
chr4 (190-233)||(18557654-18557697)
chr4 (149-206)||(11555579-11555636)
chr4 (348-404)||(19728954-19729011)
chr4 (113-183)||(9563987-9564058)
[»] chr2 (18 HSPs)
chr2 (108-261)||(35922692-35922845)
chr2 (187-342)||(23907343-23907492)
chr2 (189-342)||(22521288-22521435)
chr2 (187-404)||(23247574-23247798)
chr2 (112-211)||(13361399-13361500)
chr2 (335-390)||(39527712-39527767)
chr2 (336-404)||(23246825-23246893)
chr2 (149-208)||(44586894-44586953)
chr2 (219-342)||(23246698-23246815)
chr2 (108-208)||(32252530-32252633)
chr2 (145-233)||(16858360-16858447)
chr2 (347-404)||(23907265-23907323)
chr2 (288-342)||(35922858-35922912)
chr2 (347-404)||(22521211-22521268)
chr2 (43-123)||(35922663-35922744)
chr2 (113-208)||(23656830-23656926)
chr2 (113-198)||(24724912-24724998)
chr2 (188-233)||(18988136-18988180)
[»] scaffold0170 (1 HSPs)
scaffold0170 (187-338)||(16809-16954)
[»] chr7 (7 HSPs)
chr7 (172-278)||(3089569-3089675)
chr7 (336-404)||(3089772-3089840)
chr7 (187-247)||(16074830-16074890)
chr7 (113-208)||(4532170-4532266)
chr7 (149-208)||(11655090-11655149)
chr7 (149-208)||(13477928-13477987)
chr7 (112-205)||(37946273-37946368)
[»] scaffold1043 (1 HSPs)
scaffold1043 (187-342)||(1764-1913)
[»] chr8 (1 HSPs)
chr8 (187-342)||(17862583-17862732)
[»] scaffold0061 (2 HSPs)
scaffold0061 (187-342)||(18453-18602)
scaffold0061 (336-404)||(18611-18679)
[»] scaffold0010 (1 HSPs)
scaffold0010 (187-342)||(141813-141962)
[»] chr3 (5 HSPs)
chr3 (113-234)||(21974783-21974904)
chr3 (113-234)||(21997214-21997335)
chr3 (113-208)||(13929182-13929278)
chr3 (113-208)||(16363042-16363136)
chr3 (116-208)||(22159383-22159475)
[»] chr5 (7 HSPs)
chr5 (187-278)||(19019413-19019504)
chr5 (336-390)||(19019331-19019386)
chr5 (144-214)||(13935351-13935423)
chr5 (149-233)||(24614936-24615019)
chr5 (149-233)||(24711334-24711417)
chr5 (149-233)||(24744330-24744413)
chr5 (149-233)||(24757096-24757179)
[»] scaffold1001 (1 HSPs)
scaffold1001 (159-208)||(1005-1054)
[»] scaffold0385 (1 HSPs)
scaffold0385 (113-234)||(13773-13892)
[»] scaffold0094 (1 HSPs)
scaffold0094 (187-233)||(5426-5472)
[»] scaffold0057 (1 HSPs)
scaffold0057 (108-208)||(40696-40797)
[»] scaffold0145 (1 HSPs)
scaffold0145 (149-208)||(12129-12188)
[»] scaffold0092 (1 HSPs)
scaffold0092 (162-234)||(20110-20181)


Alignment Details
Target: chr6 (Bit Score: 352; Significance: 0; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 17 - 404
Target Start/End: Original strand, 31500118 - 31500505
Alignment:
Q  17 attttctggtggtttatttgatgccaccagtaagatacttttggcaactatgttgagaaaagttcaataaaatatttctggcaaccatgttgagaaaagt 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  31500118 attttgtggtggtttatttgatgccaccagtaagatacttttggcaactatgttgagaaaagttcagtaaaatatttctggcaactatgttgagaaaagt 31500217  T
Q  117 ccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatcttagg 216  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31500218 ccagtaacatatctctggcaaccatgttgagaaaagtccaataatataactctggcaaaatgatgagtaagtgtggtaccacattcatatagatcttagg 31500317  T
Q  217 actgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttc 316  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  31500318 actgagtccatatgcatacaaattcatgatgatctgtatttggtgaataagtgttactgtgtctgtgtgcaacgacgaaggtgattatctgttgaggttc 31500417  T
Q  317 ttatgaagattgttattggtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31500418 ttatgaagattgttattggtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 31500505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 17 - 404
Target Start/End: Original strand, 31494732 - 31495119
Alignment:
Q  17 attttctggtggtttatttgatgccaccagtaagatacttttggcaactatgttgagaaaagttcaataaaatatttctggcaaccatgttgagaaaagt 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  31494732 attttgtggtggtttatttgatgccaccagtaagatacttttggcaactatgttgagaaaagttcagtaaaatatctctggcaaccatgttgagaaaagt 31494831  T
Q  117 ccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatcttagg 216  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31494832 ccagtaacatatctctggcaaccatgttgagaaaaatccaataatataactctggcaaaatgatgagtaagtgtggtaccacattcatatagatcttagg 31494931  T
Q  217 actgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttc 316  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  31494932 actgagtccatatgcatacaaattcatgatgatctgtatttggtgaataagtgttactgtgtctgtgtgcaacgacgaaggtgattatctgttgaggttc 31495031  T
Q  317 ttatgaagattgttattggtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31495032 ttatgaagattgttattggtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 31495119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 17 - 404
Target Start/End: Original strand, 31514645 - 31515008
Alignment:
Q  17 attttctggtggtttatttgatgccaccagtaagatacttttggcaactatgttgagaaaagttcaataaaatatttctggcaaccatgttgagaaaagt 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31514645 attttgtggtggtttatttgatgccaccagtaagatacttttggcaactatgttgagaaaagttcagtaaaatatttctggcaaccatgttgagaaaagt 31514744  T
Q  117 ccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatcttagg 216  Q
    ||||||| |||||||||| || ||||||||||||||| ||||||||||||||||                     |||||||||||||||||||||||||    
T  31514745 ccagtaatatatctctggcaatcatgttgagaaaagtccaataatataactctg---------------------gtaccacattcatatagatcttagg 31514823  T
Q  217 actgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttc 316  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  31514824 actgagtccatatgcatacaaattgat---gatctgtatttggtgaataagtgtaactgtgtctgtgtgcaacgacgaaggtgattctctgttgaggttc 31514920  T
Q  317 ttatgaagattgttattggtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31514921 ttatgaagattgttattggtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 31515008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 31473528 - 31473853
Alignment:
Q  17 attttctggtggtttatttgatgccaccagtaagatacttttggcaactatgttgagaaaagttcaataaaatatttctggcaaccatgttgagaaaagt 116  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  31473528 attttgtggtggtttatttgatgccactagtaagatacttttggcaactatgttgagaaaagttcattaaaatatttctggcacccatgttgagaaaagt 31473627  T
Q  117 ccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatcttagg 216  Q
    | |||||||||||||||| |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  31473628 ctagtaacatatctctggcaaccatgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtcttagg 31473727  T
Q  217 actgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttc 316  Q
    |||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31473728 actgagtccatat------aaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttc 31473821  T
Q  317 ttatgaagattgttattggtgactattttaga 348  Q
    |||||||||| |||||||||||||||||||||    
T  31473822 ttatgaagatcgttattggtgactattttaga 31473853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 71 - 407
Target Start/End: Complemental strand, 7848217 - 7847872
Alignment:
Q  71 gagaaaagttcaataaaatatttctggcaaccatgttgagaaaagtccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctg 170  Q
    |||||||||||| ||| ||| |||||||||| ||||||||||||||||  |||||||||||| | ||| |||||||||||||| || |||||||||||||    
T  7848217 gagaaaagttcactaacatacttctggcaactatgttgagaaaagtcctataacatatctctagcaactatgttgagaaaagtccactaatataactctg 7848118  T
Q  171 acaaaatgatgagtaagtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgt 270  Q
     ||||| |||||||| |||||||||||||||||||||| |||||||| |||||  ||||||||| |||||||||||||| ||||||||||||||||||||    
T  7848117 gcaaaacgatgagtaggtgtggtaccacattcatataggtcttaggattgagtttatatgcataaaaattgatgatgatttgtatttggtgaataagtgt 7848018  T
Q  271 aactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggt---------------gactattttagaattgaat 355  Q
    ||      ||  ||| |||||  ||||||||| | ||| || |||||||||||||| |||||||||               ||||||||| |||||||||    
T  7848017 aa------ctacgtgaaacgataaaggtgattgtatgtcgatgttcttatgaagatggttattggtgactatatgtgttgcgactatttttgaattgaat 7847924  T
Q  356 tgtgacattgtgtttgtgaagattttggttcttattccgtaatgatattctt 407  Q
    | ||||||||||||||||||||| |||||||||||   ||| ||||||||||    
T  7847923 tttgacattgtgtttgtgaagatcttggttcttatgttgtattgatattctt 7847872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 71 - 404
Target Start/End: Complemental strand, 14745424 - 14745087
Alignment:
Q  71 gagaaaagttcaataaaatatttctggcaaccatgttgagaaaagtccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctg 170  Q
    ||||||||| || ||| ||| |||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||||||| ||  |||| |||||||    
T  14745424 gagaaaagtccagtaatatacttctggcaactatgttgagaaaagttcagtaacatatctctgacaaccatgttgagaaaagtccagcaataaaactctg 14745325  T
Q  171 acaaaatgatgagtaagtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgt 270  Q
     |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| | |  ||||| ||||||||||||||||||||    
T  14745324 gcaaaatgatgagtaggtgtggtaccacattcatataggtcttaggactgagtccatatgcata-aaacttacaatgatttgtatttggtgaataagtgt 14745226  T
Q  271 aactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat---------------tttagaattgaat 355  Q
    || | |||  |  ||         | ||||||||||||||| |||||||||||||| |||||||||||||||               ||| |||||||||    
T  14745225 aattatgtgag-atg---------atgtgattatctgttgatgttcttatgaagatggttattggtgactatatgtgttgtgactagtttggaattgaat 14745136  T
Q  356 tgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||    
T  14745135 tgtgacattgtgtttgtgaagattttggttcttaggctgtaatgatatt 14745087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 88 - 342
Target Start/End: Original strand, 22396670 - 22396918
Alignment:
Q  88 atatttctggcaaccatgttgagaaaagtccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctgacaaaatgatgagtaag 187  Q
    |||| ||||||||  ||||||| |||| ||||||||||||||||||| ||||||||||||||||||  | ||||||||||||| |||||||||||||| |    
T  22396670 atatctctggcaattatgttgaaaaaattccagtaacatatctctggcaaccatgttgagaaaagtctagtaatataactctggcaaaatgatgagtagg 22396769  T
Q  188 tgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgta 287  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| || |||| |||||  |||||||||| |||| ||||||       ||||||      
T  22396770 tgtggtaccacattcatataggtcttaggactaagtccatatgcataaaatttgacgatgacttgtatttggttaatacgtgtaa------ttgtgtgag 22396863  T
Q  288 acgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
    | || |||||||||||||||||||  |||||| |||||| |||||||||||||||    
T  22396864 atgatgaaggtgattatctgttgatattcttacgaagatggttattggtgactat 22396918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 390
Target Start/End: Original strand, 27122148 - 27122370
Alignment:
Q  178 gatgagtaagtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaa-ttgatgatgatctgtatttggtgaataagtgtaactgt 276  Q
    |||||||| || ||||||||||||||||||| |||||||||||||| |||||||| | ||| | || |||||| |||||||| |||||| ||||||        
T  27122148 gatgagtaggtatggtaccacattcatataggtcttaggactgagttcatatgcacaaaaactcgaggatgatttgtatttgctgaatatgtgtaa---- 27122243  T
Q  277 gtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattg---------------gtgactattttagaattgaattgtgac 361  Q
       ||||||  |||| |||| |||||||||||||| ||||||||||||||  ||||||               |||||||||||  ||||||||||||||    
T  27122244 --ttgtgtgagacgatgaagatgattatctgttgatgttcttatgaagataattattgatgactatatgagttgtgactattttgaaattgaattgtgac 27122341  T
Q  362 attgtgtttgtgaagattttggttcttat 390  Q
    |||||||||||||||||||| ||||||||    
T  27122342 attgtgtttgtgaagattttagttcttat 27122370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 341 - 404
Target Start/End: Original strand, 31475220 - 31475283
Alignment:
Q  341 attttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  31475220 attttagaattgaattgtgacattgtgtttgtgaagattttggttcttatgtcgtaatgatatt 31475283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 14745415 - 14745338
Alignment:
Q  43 ccagtaagatacttttggcaactatgttgagaaaagttcaataaaatatttctggcaaccatgttgagaaaagtccag 120  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||    
T  14745415 ccagtaatatacttctggcaactatgttgagaaaagttcagtaacatatctctgacaaccatgttgagaaaagtccag 14745338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 10907232 - 10907332
Alignment:
Q  108 gagaaaagtccagtaacatatctctggtaaccatgttg-agaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatat 206  Q
    ||||||||||||||||||||  ||||| ||| |||| | |||||||| || ||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  10907232 gagaaaagtccagtaacatacttctggcaactatgtgggagaaaagtccattaatataactctggcaaaatgacgagtaggtgtggtaccacattcatat 10907331  T
Q  207 a 207  Q
    |    
T  10907332 a 10907332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 8404235 - 8404331
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    |||||||||||||||||||||| || | ||| |||||||||| || ||| ||||||||| |||||||||||||| | ||||||||||| ||||||||    
T  8404235 aagtccagtaacatatctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaggagtggtaccacaatcatatag 8404331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 21038167 - 21038288
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc 211  Q
    ||||||||||||||| |||||| || | ||| |||||||||| || ||| ||||||||| |||||||||||||||| ||| ||||||| |||||||| ||    
T  21038167 aagtccagtaacatacctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaagagtgataccacaatcatataggtc 21038266  T
Q  212 -ttaggactgagtccatatgcata 234  Q
     ||||||  |||||||||||||||    
T  21038267 gttagga--gagtccatatgcata 21038288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 7848200 - 7848117
Alignment:
Q  51 atacttttggcaactatgttgagaaaagttcaataaaatatttctggcaaccatgttgagaaaagtccagtaacatatctctgg 134  Q
    |||||| |||||||||||||||||||||| | |||| |||| ||| ||||| ||||||||||||||||| ||| ||| ||||||    
T  7848200 atacttctggcaactatgttgagaaaagtcctataacatatctctagcaactatgttgagaaaagtccactaatataactctgg 7848117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 21083788 - 21083908
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc 211  Q
    ||||||||||||||| |||||| || | ||| |||||||||| || |||  ||| |||| |||||||||||||||| ||||||||||| |||||||| ||    
T  21083788 aagtccagtaacatacctctggcaaactatgatgagaaaagtccagtaac-taattctggcaaaatgatgagtaagagtggtaccacaatcatataggtc 21083886  T
Q  212 -ttaggactgagtccatatgcata 234  Q
     ||||||  |||||||||||||||    
T  21083887 gttagga--gagtccatatgcata 21083908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 8885654 - 8885585
Alignment:
Q  335 gtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    |||| |||||| | |||||||||||||||||| ||||||||||||| |||||||||   |||||||||||    
T  8885654 gtgattattttgggattgaattgtgacattgtatttgtgaagatttcggttcttatgttgtaatgatatt 8885585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 9190756 - 9190594
Alignment:
Q  71 gagaaaagttcaataaaatatttctggcaaccatgttg-agaaaagtccagtaacatatctctggtaaccatgttg-agaaaagttcaataatataactc 168  Q
    |||||||||||| ||| ||| |||||||||  |||| | ||| ||||||||||||||| ||||   ||| |||| | |||||||| || ||||||||||     
T  9190756 gagaaaagttcactaacatacttctggcaattatgtgggagagaagtccagtaacatacctctaacaactatgtgggagaaaagtccactaatataactt 9190657  T
Q  169 tgacaaaatgatgagtaagtgtggtaccacattcatatagatcttaggactgagtccatatgcat 233  Q
    ||  |||||  ||||||  | ||||||||||||||||||| || |||||  ||||||||||||||    
T  9190656 tggaaaaattgtgagtagctatggtaccacattcatataggtcatagga--gagtccatatgcat 9190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 22396677 - 22396753
Alignment:
Q  58 tggcaactatgttgagaaaagttcaataaaatatttctggcaaccatgttgagaaaagtccagtaacatatctctgg 134  Q
    |||||| |||||||| |||| | || ||| |||| ||||||||||||||||||||||||| ||||| ||| ||||||    
T  22396677 tggcaattatgttgaaaaaattccagtaacatatctctggcaaccatgttgagaaaagtctagtaatataactctgg 22396753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 19548079 - 19548122
Alignment:
Q  190 tggtaccacattcatatagatcttaggactgagtccatatgcat 233  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  19548079 tggtaccacattcatataggtcttaggaatgagtccatatgcat 19548122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 10641811 - 10641870
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    |||||||| ||| |||||||||  |||||||  |||| ||||||||||||||||||||||    
T  10641811 aaagttcagtaacataactctggaaaaatgacaagtaggtgtggtaccacattcatatag 10641870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 9e-80; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 43 - 407
Target Start/End: Complemental strand, 6821220 - 6820847
Alignment:
Q  43 ccagtaagatacttttggcaactatgttgagaaaagttcaataaaatatttctggcaaccatgttgagaaaagtccagtaacatatctctggtaaccatg 142  Q
    ||||||| |||||| || ||||||||||||||||||| || ||| ||| ||||| |||| |||||||||||||||||||||||||||||||| ||| |||    
T  6821220 ccagtaacatacttctgacaactatgttgagaaaagtccagtaacatacttctgacaactatgttgagaaaagtccagtaacatatctctggcaactatg 6821121  T
Q  143 ttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattga 242  Q
    ||||||||||| || ||||||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||| |||||  ||||||||| |||||||    
T  6821120 ttgagaaaagtccagtaatataactctggcaaaacgatgagtaggtgtggtaccacattcatataggtcttaggattgagtaaatatgcataaaaattga 6821021  T
Q  243 tgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattg-------- 334  Q
    ||||||| ||||||||||||||||||||||      ||| |||  ||||  ||||||||| | ||| || |||||||||||||| |||||||            
T  6821020 tgatgatttgtatttggtgaataagtgtaa------ctgcgtgagacgataaaggtgattgtatgtcgatgttcttatgaagatggttattggtgactat 6820927  T
Q  335 -------gtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatattctt 407  Q
           ||||||||||| ||||| |||| ||||||||||||||||||||| |||||||||||   ||||||||||||||    
T  6820926 atgtgttgtgactattttggaattaaattttgacattgtgtttgtgaagatcttggttcttatgttgtaatgatattctt 6820847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 187 - 389
Target Start/End: Complemental strand, 17418329 - 17418118
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||| ||||       ||||||     
T  17418329 gtgtggtaccacattcatataggtcttaggactgagtccatatgcataaaatttgacgatgatttgtatttggtgaataagagtaa------ttgtgtga 17418236  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat---------------tttagaattgaattgtgacattgtgtttg 371  Q
     |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||               |||  ||||||||||||||||||||||||    
T  17418235 gacgatgaaggtgattatctgttgatgttcttatgaagatggttattggtgactatatgtgttgtgactagtttgaaattgaattgtgacattgtgtttg 17418136  T
Q  372 tgaagattttggttctta 389  Q
    ||||||||||||||||||    
T  17418135 tgaagattttggttctta 17418118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 404
Target Start/End: Original strand, 3576630 - 3576856
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    |||||||||||||||||||||| |||||| |||  ||||||||||||| || ||||||||||| ||||||||||||||||||||||       ||||||     
T  3576630 gtgtggtaccacattcatataggtcttagtactacgtccatatgcataaaatttgatgatgatatgtatttggtgaataagtgtaa------ttgtgtga 3576723  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattg---------------gtgactattttagaattgaattgtgacattgtgtttg 371  Q
     |  | |||||||||||| |||||| |||||||||||||| |||||||               ||||||||||| |||||||||||||||||||||||||    
T  3576724 gataatgaaggtgattatatgttgatgttcttatgaagatggttattggtgactatatgttttgtgactattttggaattgaattgtgacattgtgtttg 3576823  T
Q  372 tgaagattttggttcttattccgtaatgatatt 404  Q
    ||||| |||| ||||||||   |||||||||||    
T  3576824 tgaaggttttagttcttatgatgtaatgatatt 3576856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 187 - 342
Target Start/End: Original strand, 19728784 - 19728933
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||||| || |||| |||||| | | ||||||||||||||||||       ||||||     
T  19728784 gtgtggtaccacattcatataggtcttaggattgagtccacatgcataaaatttgacgatgatttctgtttggtgaataagtgtaa------ttgtgtga 19728877  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
     |||| |||| |||||||||||||| |||||||||||||| |||||||||||||||    
T  19728878 gacgatgaagatgattatctgttgatgttcttatgaagatggttattggtgactat 19728933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 15873344 - 15873465
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc 211  Q
    |||||||||||||||||||||  || | ||| |||||||||| || ||| ||||||||| | |||||||||||| | ||||||||||| |||||||| ||    
T  15873344 aagtccagtaacatatctctgacaaactatgatgagaaaagtccagtaacataactctggctaaatgatgagtaggagtggtaccacaatcatataggtc 15873443  T
Q  212 -ttaggactgagtccatatgcata 234  Q
     ||||||  |||||||||||||||    
T  15873444 gttagga--gagtccatatgcata 15873465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 6821229 - 6821130
Alignment:
Q  71 gagaaaagttcaataaaatatttctggcaaccatgttgagaaaagtccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctg 170  Q
    ||||||| | || ||| ||| ||||| |||| |||||||||||||||||||||||||  ||||  ||| |||||||||||||| || ||| ||| |||||    
T  6821229 gagaaaattccagtaacatacttctgacaactatgttgagaaaagtccagtaacatacttctgacaactatgttgagaaaagtccagtaacatatctctg 6821130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 16285528 - 16285587
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||| || ||| ||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  16285528 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtaccacattcatatag 16285587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 18557654 - 18557697
Alignment:
Q  190 tggtaccacattcatatagatcttaggactgagtccatatgcat 233  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  18557654 tggtaccacattcatataggtcttaggaatgagtccatatgcat 18557697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 11555636 - 11555579
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatat 206  Q
    ||||| || ||| ||||||||| |||||||||||||| |||||||||| |||||||||    
T  11555636 aaagtccagtaacataactctggcaaaatgatgagtaggtgtggtaccgcattcatat 11555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 19728954 - 19729011
Alignment:
Q  348 aattgaattgtgacattgtgtttgtgaag-attttggttcttattccgtaatgatatt 404  Q
    |||||||||||||||||||||||||||||  ||||||||||||  | |||||||||||    
T  19728954 aattgaattgtgacattgtgtttgtgaagttttttggttcttaagctgtaatgatatt 19729011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 9564058 - 9563987
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgag 183  Q
    |||| ||||||||||||||||| || | |||  |||||||||||| ||| ||||||||||||||||| ||||    
T  9564058 aagtacagtaacatatctctggcaaactatgacgagaaaagttcagtaacataactctgacaaaatgttgag 9563987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 6e-53; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 108 - 261
Target Start/End: Original strand, 35922692 - 35922845
Alignment:
Q  108 gagaaaagtccagtaacatatctctggtaaccatgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatata 207  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| || ||||| ||||||| ||||| ||||||||  ||||||||||||||||||||    
T  35922692 gagaaaagtccagtaacatatctctggcaactatgttgagaaaagtccagtaataaaactctggcaaaacgatgagtagatgtggtaccacattcatata 35922791  T
Q  208 gatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtg 261  Q
    | ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  35922792 ggtcttaggactgagtccatatgcataaaaattgatgatgatttgtatttggtg 35922845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 187 - 342
Target Start/End: Complemental strand, 23907492 - 23907343
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||| || |||| |||||| ||||||||||||||||||||||       ||||||     
T  23907492 gtgtggtactacattcatataggtcttaggaatgagtccatatgcataaaatttgacgatgatttgtatttggtgaataagtgtaa------ttgtgtga 23907399  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
     |||| |||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  23907398 gacgatgaaggtgattatcttttgatgttcttatgaagatggttattggtgactat 23907343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 342
Target Start/End: Complemental strand, 22521435 - 22521288
Alignment:
Q  189 gtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaa 288  Q
    ||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||      |||||  |    
T  22521435 gtggtaccacattcataaaggtcttaggactgagtccatatccataaaaattaatgatgatttgtatttggtgaataagtgtaact------gtgtgaga 22521342  T
Q  289 cgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
    ||| |||||||||||| |||| | |||||||| ||||| |||||||||||||||    
T  22521341 cgatgaaggtgattatatgttaatgttcttataaagatggttattggtgactat 22521288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 187 - 404
Target Start/End: Original strand, 23247574 - 23247798
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggact-gagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtg 285  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||| || ||||||||||| ||||||||| ||||||||||||       ||||||    
T  23247574 gtgtggtaccacattcatataggtcttaggaattgagtccatatgcataaaatttgatgatgatttgtatttggcgaataagtgtaa------ttgtgtg 23247667  T
Q  286 taacgacgaaggtgattatctgttgaggttcttatgaagattgttattgg------------tgactattttagaattgaattgtgacattgtgtttgtg 373  Q
      | || ||||||||||||||||||| |||||||||| ||| ||||||||            |||||||||| ||||||||||||||| | |||||||||    
T  23247668 agatgatgaaggtgattatctgttgatgttcttatgatgatggttattggtgactaatgttttgactattttggaattgaattgtgacgtggtgtttgtg 23247767  T
Q  374 aagattttggttcttattccgtaatgatatt 404  Q
    || ||||||||||||||   |||||||||||    
T  23247768 aaaattttggttcttatgatgtaatgatatt 23247798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 13361500 - 13361399
Alignment:
Q  112 aaagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaat-gatgagtaagtgtggtaccacattcatataga 209  Q
    |||||||||||||||| |||||| || | |||| ||||||||| || ||| ||||||||| |||||| || ||||| |||||||||||||||||||||||    
T  13361500 aaagtccagtaacatacctctggcaaactatgtagagaaaagtccagtaacataactctggcaaaattgaagagtaggtgtggtaccacattcatataga 13361401  T
Q  210 tc 211  Q
    ||    
T  13361400 tc 13361399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 335 - 390
Target Start/End: Original strand, 39527712 - 39527767
Alignment:
Q  335 gtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttat 390  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  39527712 gtgactcttttggaattgaattgtgacgttgtgtttgtgaagattttggttcttat 39527767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 23246825 - 23246893
Alignment:
Q  336 tgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    |||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||   |||||||||||    
T  23246825 tgactattttggaattgaattgtgacgtggtgtttgtgaaaattttggttcttatgatgtaatgatatt 23246893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 44586894 - 44586953
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||| || ||| ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  44586894 aaagtccagtaacataactctggcaaaatgatgagtaggtgtggtaccacattcatatag 44586953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 342
Target Start/End: Original strand, 23246698 - 23246815
Alignment:
Q  219 tgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttctt 318  Q
    |||||||||||| ||| || ||||||||||| ||| ||||| ||||||||||||       ||||||  | || |||||||||||||| |||| ||||||    
T  23246698 tgagtccatatgtataaaatttgatgatgatttgtgtttggcgaataagtgtaa------ttgtgtgagatgatgaaggtgattatctattgatgttctt 23246791  T
Q  319 atgaagattgttattggtgactat 342  Q
    |||| |||  ||||||||||||||    
T  23246792 atgatgatgattattggtgactat 23246815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 32252530 - 32252633
Alignment:
Q  108 gagaaaagtccagtaacatat--ctctggtaaccatgttg-agaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcat 204  Q
    ||||||||||||||||||||   |||| | ||| |||| | |||||||| || |||||||||||||  |||||| |||||| |||||||||||||| |||    
T  32252530 gagaaaagtccagtaacatacacctctcgaaactatgtgggagaaaagtccagtaatataactctgcaaaaatggtgagtaggtgtggtaccacatacat 32252629  T
Q  205 atag 208  Q
    ||||    
T  32252630 atag 32252633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 16858447 - 16858360
Alignment:
Q  145 gagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc-ttaggactgagtccatatgcat 233  Q
    ||||||||| | |||| |||||| || |||||||| || || |||||||||||||||||||||| || ||||||  ||||||||||||||    
T  16858447 gagaaaagtccgataacataactttggcaaaatgacgaataggtgtggtaccacattcatataggtcgttagga--gagtccatatgcat 16858360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 23907323 - 23907265
Alignment:
Q  347 gaattgaattgtgacattgtgtttgtgaag-attttggttcttattccgtaatgatatt 404  Q
    ||||||||||||||||||||||||||||||  ||||||||||||  | |||||||||||    
T  23907323 gaattgaattgtgacattgtgtttgtgaagctttttggttcttaagctgtaatgatatt 23907265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 35922858 - 35922912
Alignment:
Q  288 acgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
    |||| ||||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  35922858 acgatgaaggtgtttatctgttgatgttcttatgaagatgattattggtgactat 35922912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 22521268 - 22521211
Alignment:
Q  347 gaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||   |||||||||||    
T  22521268 gaattaaattgtggcattgtgcttgtgaagattttggttcttatgatgtaatgatatt 22521211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 35922663 - 35922744
Alignment:
Q  43 ccagtaagatacttttggcaactatgttg-agaaaagttcaataaaatatttctggcaaccatgttgagaaaagtccagtaa 123  Q
    ||||||| |||||| ||| || ||||| | |||||||| || ||| |||| ||||||||| |||||||||||||||||||||    
T  35922663 ccagtaacatacttctggaaattatgtgggagaaaagtccagtaacatatctctggcaactatgttgagaaaagtccagtaa 35922744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 23656830 - 23656926
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||| ||||||||| |||||| || | ||| |||||||||  || ||| |||||||||  |||| |||||||| | ||||||||||||||||||||    
T  23656830 aagtctagtaacatacctctggaaaactatgatgagaaaagcccagtaacataactctggaaaaacgatgagtaggagtggtaccacattcatatag 23656926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 24724912 - 24724998
Alignment:
Q  113 aagtccagtaacatatctctggtaa-ccatgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccac 198  Q
    ||||||||||||||| |||||| || | ||| |||||||||| || ||| |||||| |||||| ||| |||||| | ||||||||||    
T  24724912 aagtccagtaacatacctctggcaagctatgatgagaaaagtccagtaacataactttgacaatatggtgagtaggagtggtaccac 24724998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 18988136 - 18988180
Alignment:
Q  188 tgtggtaccacattcatatagatcttaggactgagtccatatgcat 233  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||    
T  18988136 tgtggtaccacattcatataggtcttagga-tgactccatatgcat 18988180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 187 - 338
Target Start/End: Complemental strand, 16954 - 16809
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||| || |||| |||||| ||||||||||||||||||||||       ||||||     
T  16954 gtgtggtaccacattcatataggtcttagaaatgagtccatatgcataaaatttgacgatgatttgtatttggtgaataagtgtaa------ttgtgtga 16861  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtga 338  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  16860 gacgacgaaggtgattatctgttgatgttcttatgaagatggttattggtga 16809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 3089569 - 3089675
Alignment:
Q  172 caaaatgatgagtaagtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgta 271  Q
    ||||| |||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  3089569 caaaacgatgagtaggtctggtaccacattcatataggtcttaggtctgagtccatatgcataaaaattgatgatgatttgtatttggtgaataagtgta 3089668  T
Q  272 actgtgt 278  Q
    | |||||    
T  3089669 attgtgt 3089675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 3089772 - 3089840
Alignment:
Q  336 tgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||   |||||||||||    
T  3089772 tgactattttggaatcgaattgtgacattgtgtttgtgaagattttggttcctatgttgtaatgatatt 3089840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 16074830 - 16074890
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatg 247  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| || |||| ||||    
T  16074830 gtgtggtaccacatgcatataggtcttaggactgagtccatatgcataaaatttgacgatg 16074890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 4532170 - 4532266
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||| ||||||||| |||||| || | ||| |||||||||| || ||| |||||| || |||||||||||||| | ||||||||||| ||||||||    
T  4532170 aagtctagtaacatacctctggcaaactatgatgagaaaagtccagtaacataactatggcaaaatgatgagtaggagtggtaccacaatcatatag 4532266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 11655149 - 11655090
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||| |||||| |||||| || |||||||| ||||| ||||||||||||||||||||||    
T  11655149 aaagtccaataacataactttggcaaaatgacgagtaggtgtggtaccacattcatatag 11655090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 13477928 - 13477987
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||| || ||| |||||||||  ||||||||||||| ||||||||||||||||||||||    
T  13477928 aaagtccagtaacataactctggaaaaatgatgagtaggtgtggtaccacattcatatag 13477987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 37946273 - 37946368
Alignment:
Q  112 aaagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatg-atgagtaagtgtggtaccacattcata 205  Q
    |||||||| ||||||| |||||  || | |||| ||||||||| |||||| ||||||||| ||||||| | ||||| ||||| |||||||||||||    
T  37946273 aaagtccaataacatacctctgacaaactatgtagagaaaagtccaataacataactctggcaaaatggaagagtaggtgtgttaccacattcata 37946368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1043 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold1043
Description:

Target: scaffold1043; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 187 - 342
Target Start/End: Original strand, 1764 - 1913
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||| ||| |||||||||||||| ||| |||||  |         
T  1764 gtgtggtaccacattcatataggtcttaggactgagtccatatgcataaaatttgacgatgatttgtgtttggtgaataagtataattgtgttag----- 1858  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
     |||| |||| ||||||| |||||| ||||||||||||||  ||||||||||||||    
T  1859 -acgatgaagatgattatatgttgatgttcttatgaagatgattattggtgactat 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 187 - 342
Target Start/End: Original strand, 17862583 - 17862732
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||| ||| ||||||||||| ||||||       ||||||     
T  17862583 gtgtggtaccacattcatataggtcttaggactgagtccatatgcataaaatttgacgatgatttgtgtttggtgaataggtgtaa------ttgtgtga 17862676  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
     |||| | || |||||||||||||| |||||||||||||| ||||||||| |||||    
T  17862677 gacgatgtagatgattatctgttgatgttcttatgaagatggttattggttactat 17862732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 342
Target Start/End: Original strand, 18453 - 18602
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||       ||||||     
T  18453 gtgtggtacgacattcatataggtcttaggactgagtccatatgcataaaaattgatgatgatttgtatttgacgaataagtgtaa------ttgtgtga 18546  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
     | || |||||||| |||||||||| |||||||||  ||| |||||| ||||||||    
T  18547 gatgatgaaggtgactatctgttgatgttcttatggcgatggttattagtgactat 18602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 18611 - 18679
Alignment:
Q  336 tgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 404  Q
    |||||||||| |||||||||| ||||||  || ||||||||||||||||||||||   |||||||||||    
T  18611 tgactattttggaattgaattatgacatgctgattgtgaagattttggttcttatgatgtaatgatatt 18679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 342
Target Start/End: Complemental strand, 141962 - 141813
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 286  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| || |||| |||||| ||| ||||||||||||||||||       ||||||     
T  141962 gtgtggtaccacattcatataggtcttaggactgagtccatttgcataaaatttgacgatgatttgtgtttggtgaataagtgtaa------ttgtgtga 141869  T
Q  287 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 342  Q
     |||| |||| ||||||| |||||  |||||||||||||| ||||| |||||||||    
T  141868 gacgatgaagatgattatttgttgttgttcttatgaagatggttatcggtgactat 141813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 21974904 - 21974783
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc 211  Q
    |||||||||||||||||||||| || | ||| |||||||||| || ||| ||||||||| |||||||||||||| | || |||||||| |||||||| ||    
T  21974904 aagtccagtaacatatctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaggagttgtaccacaatcatataggtc 21974805  T
Q  212 -ttaggactgagtccatatgcata 234  Q
     ||||||  |||||||||||||||    
T  21974804 gttagga--gagtccatatgcata 21974783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 21997335 - 21997214
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc 211  Q
    |||||||||||||||||||||| || | ||| |||||||||| || ||| ||||||||| |||||||||||||| | || |||||||| |||||||| ||    
T  21997335 aagtccagtaacatatctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaggagttgtaccacaatcatataggtc 21997236  T
Q  212 -ttaggactgagtccatatgcata 234  Q
     ||||||  |||||||||||||||    
T  21997235 gttagga--gagtccatatgcata 21997214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 13929182 - 13929278
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||||||||||||| |||||| || | ||| |||||||||| || ||| ||||||||| |||||||||||||| | ||||||||||| || |||||    
T  13929182 aagtccagtaacatacctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaggagtggtaccacaatcttatag 13929278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 16363042 - 16363136
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    |||||||||||||||||||||| || | ||| |||||||||| || ||| |  |||||| |||||||||||||| | ||||||||||| ||||||||    
T  16363042 aagtccagtaacatatctctggcaaactatgatgagaaaagtccattaaca--actctggcaaaatgatgagtaggagtggtaccacaatcatatag 16363136  T

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Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 22159475 - 22159383
Alignment:
Q  116 tccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||||||||||||||||| || | ||| |||||||||| || ||| ||||||||| | |||||||||||| | ||||||||||| ||||||||    
T  22159475 tccagtaacatatctctggcaaactatgatgagaaaagt-cagtaacataactctggcgaaatgatgagtatgagtggtaccacaatcatatag 22159383  T

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Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 19019504 - 19019413
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgt 278  Q
    |||| ||||||||||||||||| |  ||||| | ||||||||| |||| |||||||||||||| ||||| || |||||||||||||||||||    
T  19019504 gtgtagtaccacattcatataggtaataggatttagtccatatacataaaaattgatgatgatttgtatatgatgaataagtgtaactgtgt 19019413  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 19019386 - 19019331
Alignment:
Q  336 tgactattttagaattgaattgtgacattg-tgtttgtgaagattttggttcttat 390  Q
    |||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||    
T  19019386 tgactattttggaattgaattgtaacattggtgtttatgaagattttggttcttat 19019331  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 13935423 - 13935351
Alignment:
Q  144 tgagaaaagttcaataatataactctgacaaa--atgatgagtaagtgtggtaccacattcatatagatctta 214  Q
    |||||||| | || ||| ||||||||||||||  ||||  |||| ||||||||||||||||||||||||||||    
T  13935423 tgagaaaaatccagtaacataactctgacaaactatgactagtaggtgtggtaccacattcatatagatctta 13935351  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 24615019 - 24614936
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc-ttaggactgagtccatatgcat 233  Q
    ||||| || ||| ||||||||| |||||||| ||||| ||||||||  |||||||||||| || ||||||  ||||||||||||||    
T  24615019 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtatgacattcatataggtcgttagga--gagtccatatgcat 24614936  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 24711417 - 24711334
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc-ttaggactgagtccatatgcat 233  Q
    ||||| || ||| ||||||||| |||||||| ||||| ||||||||  |||||||||||| || ||||||  ||||||||||||||    
T  24711417 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtatgacattcatataggtcgttagga--gagtccatatgcat 24711334  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 24744413 - 24744330
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc-ttaggactgagtccatatgcat 233  Q
    ||||| || ||| ||||||||| |||||||| ||||| ||||||||  |||||||||||| || ||||||  ||||||||||||||    
T  24744413 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtatgacattcatataggtcgttagga--gagtccatatgcat 24744330  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 24757179 - 24757096
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc-ttaggactgagtccatatgcat 233  Q
    ||||| || ||| ||||||||| |||||||| ||||| ||||||||  |||||||||||| || ||||||  ||||||||||||||    
T  24757179 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtatgacattcatataggtcgttagga--gagtccatatgcat 24757096  T

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Target: scaffold1001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 1054 - 1005
Alignment:
Q  159 aatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  1054 aatataactctgacaaaatgacgagtaggtgtggtaccacattcatatag 1005  T

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Target: scaffold0385 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 13892 - 13773
Alignment:
Q  113 aagtccagtaacatatctctggtaacc-atgttgagaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc 211  Q
    |||||||||||||||||||||| || | ||| |||||||||| || ||| |  |||||| |||||||||||||| | ||||||||||| |||||||||||    
T  13892 aagtccagtaacatatctctggcaaactatgatgagaaaagtccattaaca--actctggcaaaatgatgagtaggagtggtaccacaatcatatagatc 13795  T
Q  212 -ttaggactgagtccatatgcata 234  Q
     ||||||  |||| ||||||||||    
T  13794 gttagga--gagtacatatgcata 13773  T

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Target: scaffold0094 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 5426 - 5472
Alignment:
Q  187 gtgtggtaccacattcatatagatcttaggactgagtccatatgcat 233  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||    
T  5426 gtgtggtaccacattcatataggtcttaggaatgagtccatatgcat 5472  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 40797 - 40696
Alignment:
Q  108 gagaaaagtccagtaacatatctctggtaaccatgttga-gaaaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatat 206  Q
    |||||||||||| ||||||| |||| | ||| |||| |  ||||||| || ||||||||||||  ||||||| | ||||  |||||||||||||||||||    
T  40797 gagaaaagtccaataacatacctctagcaactatgtgggtgaaaagtccagtaatataactctagcaaaatggtaagtagatgtggtaccacattcatat 40698  T
Q  207 ag 208  Q
    ||    
T  40697 ag 40696  T

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Target: scaffold0145 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 12188 - 12129
Alignment:
Q  149 aaagttcaataatataactctgacaaaatgatgagtaagtgtggtaccacattcatatag 208  Q
    ||||| || ||| ||||||||| |||||||| ||||| || |||||||||||||||||||    
T  12188 aaagtccagtaacataactctggcaaaatgacgagtaggtttggtaccacattcatatag 12129  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 20110 - 20181
Alignment:
Q  162 ataactctgacaaaatgatgagtaagtgtggtaccacattcatatagatc-ttaggactgagtccatatgcata 234  Q
    ||||||||| |||||||||||||| | ||||||||||| ||||| || || ||||||  |||||||||||||||    
T  20110 ataactctggcaaaatgatgagtaggagtggtaccacaatcatacaggtcgttagga--gagtccatatgcata 20181  T

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