View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20282_high_6 (Length: 308)
Name: NF20282_high_6
Description: NF20282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20282_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 20043797 - 20043609
Alignment:
| Q |
18 |
tcttggattgtggattctggtgctagtgaccacatatgttcatcactgtagttctatgattcgtataactctatatcacctgtcaatatcaaattacgta |
117 |
Q |
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| T |
20043797 |
tcttggattgtggattctggtgctagtgaccacatatgttcatcactgaagttctatgattcgtataactctatatcacctgtcaatatcaaattaccta |
20043698 |
T |
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| Q |
118 |
atggacatttagctgtagcaagat----tggtattgttaagttttcaccaggacttgttggcaaaaatgttctgtttgtgcctgaattc |
202 |
Q |
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| T |
20043697 |
atggacatttagttgtagcaagattttctggtattgttaagttttcaccaggacttgttggcaaaaatgttctgtttgtgcctgaattc |
20043609 |
T |
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