View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20284_high_12 (Length: 206)
Name: NF20284_high_12
Description: NF20284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20284_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 18315201 - 18315005
Alignment:
| Q |
12 |
gattatacttgaagttagaatttagagttttttcttgtagaatcaatttttt-catgcacatttttatgcaaatatattcaa---------------gat |
95 |
Q |
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| T |
18315201 |
gattatatttgaagttagaatttagagttttttcttgtagaatcaattttttgcatgcacatttttatgcaaatatattcaaataaaaaccattttagat |
18315102 |
T |
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| Q |
96 |
tcaactaaaagtaattcatttaaaattagtttttaccatagaacaaaaaacgatgaatgttttctagtacaattgattctaatgaagtgagatttgt |
192 |
Q |
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| T |
18315101 |
tcaactaaaagtaattcatttaaaattagtttttaccatagaataaaaaacgatgaatgttttctagtacaattgattctaatgaagtgagatttgt |
18315005 |
T |
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