View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20284_low_4 (Length: 469)
Name: NF20284_low_4
Description: NF20284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20284_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 16 - 451
Target Start/End: Original strand, 46905164 - 46905599
Alignment:
| Q |
16 |
ccctcaacacaacaattctacaaaacgatcactcttcttcttccccgaatttcaaggtacttcctttcagaaatggaaggcctttagcttcttccactgc |
115 |
Q |
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| T |
46905164 |
ccctcaacacaacaattctacaaaacgatcactcttcttcttccccgaatttcaaggtacttcctttcagaaatggaaggcctttagcttcttccactgc |
46905263 |
T |
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| Q |
116 |
cggtttcggtgactctccgccgatttggcatctgggttggatcaatttggatgacctcagaggtatttttgaaaactccggtgcccagttgaatggagac |
215 |
Q |
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| T |
46905264 |
cggtttcggtgactctccgccgatttggcatctgggttggatcaatttggatgacctcagaggtatttttgaaaactccggtgcccagttgaatggagac |
46905363 |
T |
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| Q |
216 |
tcgtttgtctacttgggttcgagtgtagaggaagataacgtttactgggctatcgatgtttctgataaggtacctgaattgggtactgacaaggagatgg |
315 |
Q |
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| T |
46905364 |
tcgtttgtctacttgggttcgagtgtagaggaagataacgtttactgggctatcgatgtttctgataaggtacctgaattgggtactgacaaggagatgg |
46905463 |
T |
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| Q |
316 |
agttgagttttgtggagctccggactctcatggtggccactgattgggaggatttgaaagcaatggaaaacttggctattgctggtaatgtaagttagtt |
415 |
Q |
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| T |
46905464 |
agttgagttttgtagagctccggactctcatggtggccactgattgggaggatttgaaagcaatggaaaacttgactattgctggtaatgtaagttagtt |
46905563 |
T |
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| Q |
416 |
atcttgctaacatgataaatcaaactttgaagtagt |
451 |
Q |
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| T |
46905564 |
atcttgctaacatgataaatcaaactttgaagtagt |
46905599 |
T |
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