View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20285_high_11 (Length: 314)
Name: NF20285_high_11
Description: NF20285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20285_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 33676076 - 33676381
Alignment:
| Q |
1 |
tgtttttggtaactctatctatcatttttctaattacactattattagtaatagttgaatctggcttattaattgaattttgtctgtgccagccaaaatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33676076 |
tgtttttggtaactctatctatcatttttctaattacactattattagtaatagttgaatctggcttattaattgaattttgtctgtgccagccaaaatt |
33676175 |
T |
|
| Q |
101 |
taatgacaatctgttgactgcggagttcgtccatggaaatgctgatcaacccaaggaaatgttcaactatgatgctcagttaccgtctattggaagaggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
33676176 |
taatgacaatctgttgactgcggagttcgtccatgggaatgctgatcaacccaaggaaatgttcaactatgatgctcagttaccgcctattggaagaggg |
33676275 |
T |
|
| Q |
201 |
aatgtgccgaaacaaaatgatcaatttaagcagtacttccccccatccaagtctgtcatgttaaacaacaaatctgatttaatccagatccgtgcaacag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33676276 |
aatgtgccgaaacaaaatgatcaatttaagcagtacttccccccatccaagtctgtcatgttaaacaacaaatctgatttaatccagatccgtgcaacag |
33676375 |
T |
|
| Q |
301 |
ctaggg |
306 |
Q |
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||||| |
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| T |
33676376 |
ataggg |
33676381 |
T |
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