View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20287_high_1 (Length: 719)
Name: NF20287_high_1
Description: NF20287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20287_high_1 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 651; Significance: 0; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 651; E-Value: 0
Query Start/End: Original strand, 20 - 710
Target Start/End: Complemental strand, 24840220 - 24839530
Alignment:
| Q |
20 |
actctctctttggtcttcctgttttcgcccagcttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggacttc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
24840220 |
actctctctttggtcttcctgttttcgcccaccttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggatttc |
24840121 |
T |
|
| Q |
120 |
gaaaggtatggcaccttccacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatt |
219 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24840120 |
gaaaggtatggcaccttctacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatt |
24840021 |
T |
|
| Q |
220 |
tttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttt |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24840020 |
tttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttt |
24839921 |
T |
|
| Q |
320 |
tggctagcttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatgtaca |
419 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
24839920 |
tggctagcttatataacgatttaaggttgtttaagaacacaattgttgatttcaaaaaatttcctgataaatttccctttatgctggacgttaatgtaca |
24839821 |
T |
|
| Q |
420 |
atcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgaga |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24839820 |
atcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgggcaataatcgagaccatgtattgttgagg |
24839721 |
T |
|
| Q |
520 |
tggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgata |
619 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24839720 |
tggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagtcatcgatgattttatttggcgtccttatgttcaatatgttgata |
24839621 |
T |
|
| Q |
620 |
agtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatattctt |
710 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24839620 |
agtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgttatattctt |
24839530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 20 - 710
Target Start/End: Original strand, 19943591 - 19944279
Alignment:
| Q |
20 |
actctctctttggtcttcctgtttt-cgcccagcttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggactt |
118 |
Q |
| |
|
||||||||||||||| ||||||||| | |||| ||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||||||| || || |
|
|
| T |
19943591 |
actctctctttggtcatcctgtttttcacccaacttgaagatcaggagattagaaaggtggaacagaagctcatcagcattgaaagccaagagatgattt |
19943690 |
T |
|
| Q |
119 |
cgaaaggtatggcaccttccacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaat |
218 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
19943691 |
caaaaggtatggccccttccacatcagtgtggatggatattttcatcgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcaat |
19943790 |
T |
|
| Q |
219 |
ttttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgtt |
318 |
Q |
| |
|
|| ||||| ||||||| |||| | | |||||| ||||| ||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
19943791 |
tt--gtttttcctcatagatacaatgtggtgaaaagttct--gtttcctattgctgttcatcttgctagagggattcctatggctttggcacctgctgtt |
19943886 |
T |
|
| Q |
319 |
ttggctagcttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaattt-ccctttatgttggacgttaatgta |
417 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||| | |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19943887 |
ttggctagcttatataaggatttgagtttgtttaagaaacaaattgttgatttgaaaaaatgtcctgataaattttccctttatgttggacgttaatgta |
19943986 |
T |
|
| Q |
418 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
517 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |
|
|
| T |
19943987 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaaccaaagttgatcaataatggagaccatgtattgttga |
19944086 |
T |
|
| Q |
518 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttga |
617 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
19944087 |
ggtggcataatgttaaggccttgaaaattgacaatgtggggttggcattagattcagctatcaatgattttatttgccgtccttatgttcaatatgctga |
19944186 |
T |
|
| Q |
618 |
taagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatattctt |
710 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19944187 |
taagtgtggagtatattatccaaatgatgaaactttggtaccatttaaaaaagatttggtagtagaacaaatgctctcatttgttatattctt |
19944279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 20 - 699
Target Start/End: Original strand, 19857943 - 19858623
Alignment:
| Q |
20 |
actctctctttggtcttcctgttttcgcccagcttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggacttc |
119 |
Q |
| |
|
|||||||||||||| |||||||||| | || |||||||| || ||| ||| |||||||||||||||||||||||||||| | ||||||| | |
|
|
| T |
19857943 |
actctctctttggtgatcctgttttcaaaccactcgaagatcaggaaatgcaagatgtggaacagaagctcatcaacattgaaacaaaggagaggattat |
19858042 |
T |
|
| Q |
120 |
gaaaggtatgg-caccttccacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaat |
218 |
Q |
| |
|
||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19858043 |
caaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttgtcaat |
19858142 |
T |
|
| Q |
219 |
ttttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgtt |
318 |
Q |
| |
|
||||||||| ||| ||| ||||| | |||||| | |||||||||||| ||||| || ||| |||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
19858143 |
ttttgtttttcctaatagatactttaatgtgaaaagatctttgtttcctattgctattggtcttgctagaggaaatactatcgctttggcacctgctgtt |
19858242 |
T |
|
| Q |
319 |
ttggctagcttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatgtac |
418 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||||||| | ||||||| || ||||||| || | |||||||||| || ||||||||||||||||| |
|
|
| T |
19858243 |
ttggctagcttatataacgatttgagtttgtttaagaaacaaattgttgaattgaaaaaatgtcgttataaatttccattggtgttggacgttaatgtat |
19858342 |
T |
|
| Q |
419 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgag |
518 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| || |||| | | ||||||| || |
|
|
| T |
19858343 |
aatcacccttttacttgcttcaagtttgggtttgggaaaggttcaaaaatttagagccacaacccatgttgatcaagcatggagaacctttattgtttag |
19858442 |
T |
|
| Q |
519 |
atggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgat |
618 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||| | ||||||||||||||| || || ||||||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
19858443 |
gtggcataaggttaaggccttgaaagttgacaatgttaagttggcattagactcggctattgatgattttatttggcgtccttacgttagatatgcagat |
19858542 |
T |
|
| Q |
619 |
aagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcattt |
699 |
Q |
| |
|
||||||||| ||||||||||||| || |||| || |||| ||| | ||||||||||||| | ||||||||||||||||| |
|
|
| T |
19858543 |
aagtgtggactgttttatccaaatgacgaaatttgggtatcatattagaaagatttggtcgataaacaaatgctctcattt |
19858623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 126 - 700
Target Start/End: Original strand, 19853490 - 19854052
Alignment:
| Q |
126 |
tatggcaccttccacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgtt |
225 |
Q |
| |
|
|||| ||||||||||||| ||||||||| | ||||| | | ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19853490 |
tatgccaccttccacatctgtgtggatgacttttttctttggtaaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtctatttttgtt |
19853589 |
T |
|
| Q |
226 |
ttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggcta |
325 |
Q |
| |
|
|| ||||||| ||||| | | |||||| | |||||||||||| ||||| ||| ||| |||||||| ||| ||||| |||||||||||||||||||||||| |
|
|
| T |
19853590 |
tttcctcatagatactttattgtgaaaagatctttgtttcctattgctattcgtcttgctagaggtaatactattgctttggcacctgctgttttggcta |
19853689 |
T |
|
| Q |
326 |
gcttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatgtacaatcacc |
425 |
Q |
| |
|
|||||||||| ||||| || ||||||||||| | | ||||||||||||||||||||||| ||| || |||||| | |||||||| |
|
|
| T |
19853690 |
gcttatataacgatttgagtttgtttaagaaaaaaattgttgatttcaaaaaatttcct-----------ctt-------gatgttaatctgcaatcacc |
19853771 |
T |
|
| Q |
426 |
cttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcat |
525 |
Q |
| |
|
||||||| |||| |||| |||||| ||||| || |||| |||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
19853772 |
cttttacttggtacaagcttgggtgtgggagagattcataaatttgcagccacaaccgaagttgatcaacaatggagaccatgtattgttgaggtggcat |
19853871 |
T |
|
| Q |
526 |
aatgttaa---ggccttgaaaattgacaatgtgaggttggcattaga---ctcagccatcgatgattttatttggcgtccttatgttcaatatgttgata |
619 |
Q |
| |
|
|| ||| | | ||||||||||| || ||||||||||||||||||| ||| | || ||||||||||||||||||||||||||| |||| | ||| |
|
|
| T |
19853872 |
aaggttgaagcgcccttgaaaattaaccatgtgaggttggcattagattcatcaacaatggatgattttatttggcgtccttatgttagctatgctcata |
19853971 |
T |
|
| Q |
620 |
agtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttg |
700 |
Q |
| |
|
|||||||| ||||||| || || ||||||| | ||||||||||||||| |||||||| | |||||||||||| ||||| |
|
|
| T |
19853972 |
agtgtggaatgttttacccgaatgatgaaattcgggtaccatttaagaacgatttggtggataaacaaatgctcttatttg |
19854052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 148 - 706
Target Start/End: Original strand, 26647004 - 26647562
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
||||| |||| |||||| ||||||||||||||| |||| ||||||||||| ||| |||||||||||||| ||| |||||| |||||| | | | | | |
|
|
| T |
26647004 |
tggatcgatagtttcatggataaaggtagtgaaattgaacatgaagcattcctttctacttggttgtcagtttatgtttttcctcatctaaatt---tgg |
26647100 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
347 |
Q |
| |
|
||||| ||| |||||||||| ||||||||||||| |||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||| || |
|
|
| T |
26647101 |
tgaaaagttgtttgtttcctattgctgttcatcttgctagagggaatccaattgctttggcaccggctgttttagctagcttatataaggatttaagttt |
26647200 |
T |
|
| Q |
348 |
gtttaagaacacagttgttgatttcaaaaaatttcctgat---------aaatttccctttatgttggacgttaatgtacaatcacccttttacctggtt |
438 |
Q |
| |
|
||||||||| ||| |||||||||| |||||| || ||||| | || ||| || ||| |||| | | ||||||||||||||| ||||| |
|
|
| T |
26647201 |
gtttaagaaaacacttgttgatttgaaaaaaatttctgatggtggtgatagatatccttt------ggaagttactcttcaatcacccttttacttggtt |
26647294 |
T |
|
| Q |
439 |
caagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggcct |
538 |
Q |
| |
|
||| ||||||| |||||||||||||||||||| || ||||||||||| |||| ||| | |||||| | | ||||| || |||||||| |||||| || |
|
|
| T |
26647295 |
caaatttgggtgtgggaaaggttcaaaaatttacaaccacaacccaatttgatcaaccaaggagaccctttgttgtttaggtggcataaggttaagatct |
26647394 |
T |
|
| Q |
539 |
tgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatcc |
638 |
Q |
| |
|
|||||||||||| ||| | || |||| |||| || || | ||||||||| ||||||||||||||||| ||||| ||||||||||| | |||||||||| |
|
|
| T |
26647395 |
tgaaaattgacagtgttaagtgggcactagattcggctgttgatgattttctttggcgtccttatgttagatatgctgataagtgtgaattgttttatcc |
26647494 |
T |
|
| Q |
639 |
aaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
706 |
Q |
| |
|
||| ||||||| || |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
26647495 |
aaatgatgaaatttcggtaccatttaagaaagatttggttgatgaacaaatgctctcatttgttatat |
26647562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 151 - 676
Target Start/End: Original strand, 26653155 - 26653679
Alignment:
| Q |
151 |
atggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtga |
250 |
Q |
| |
|
|||||||||||||| || ||||||||||| |||| ||||| ||||| ||||| |||||||||||||||||||||| ||||||| | | | |||||| |
|
|
| T |
26653155 |
atggatattttcattgactaaggtagtgaaattgaacatgatgcattccttgcagcttggttgtcaatttttgtttttcctcatatagaat---tagtga |
26653251 |
T |
|
| Q |
251 |
aatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtt |
350 |
Q |
| |
|
|| ||||||||||| || ||||||||||||| |||||||| ||||||||| |||||||||| |||||||| ||||| |||||||||| || | ||||| |
|
|
| T |
26653252 |
aaagttctttgttttctattgctgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagtatatataaggacttgactttgtt |
26653351 |
T |
|
| Q |
351 |
taagaacacagttgttgattt--caaaaaatt-------tcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaa |
441 |
Q |
| |
|
|||||| ||| |||||| ||| ||||| ||| | ||||| |||||| || ||| |||||| ||| ||||||||||||| |||||||| |
|
|
| T |
26653352 |
taagaaaacaattgttggtttgtcaaaatattatgttggtggtgatagatttccttt------ggaagttaatctacgatcacccttttacttggttcaa |
26653445 |
T |
|
| Q |
442 |
gtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttga |
541 |
Q |
| |
|
||||||| ||||| ||||||| ||||||||| |||||||||||||||| ||||| | ||||||| ||||||||| |||||||| |||| | |||| | |
|
|
| T |
26653446 |
atttgggtgtgggagaggttcacaaatttgcaaccacaacccaagttgatcaatagtgaagaccattcattgttgaggtggcataaggttatgccctt-a |
26653544 |
T |
|
| Q |
542 |
aaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaa |
641 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| || ||||||||| |||||||||| |||||| |||| | | ||||||||| ||||||||||||| |
|
|
| T |
26653545 |
taatttacaatgtgaggttggcattagactcagcaattgatgattttctttggcgtccatatgttagatatcctaacaagtgtggaatgttttatccaaa |
26653644 |
T |
|
| Q |
642 |
ggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
|||||| || ||||||||||||||| ||||||| |
|
|
| T |
26653645 |
taatgaaatttgggtaccatttaagaaggatttgg |
26653679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 155 - 662
Target Start/End: Original strand, 19812287 - 19812800
Alignment:
| Q |
155 |
atattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtgaaatg |
254 |
Q |
| |
|
|||||||| | | ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | |||||| |
|
|
| T |
19812287 |
atattttcgttggtaaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaata---tttggtgaaaaa |
19812383 |
T |
|
| Q |
255 |
ttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaag |
354 |
Q |
| |
|
||||||||||| | ||| ||| ||| ||||||||| |||||||| |||||||||| ||||| ||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
19812384 |
gtctttgtttccgatcgctattcttcttgctagagggtatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagtttgtttaag |
19812483 |
T |
|
| Q |
355 |
aacacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagttt |
445 |
Q |
| |
|
|| ||| |||||||||| ||||| ||| ||||| ||||||| ||||| ||| | | ||||||||||||||| |||||||| ||| |
|
|
| T |
19812484 |
aaaacaattgttgatttgtcaaaatatcctgttggtggtgatagatttccc------ttggagattactcttcaatcacccttttacttggttcaaattt |
19812577 |
T |
|
| Q |
446 |
gggtttgggaaaggttcaaaaatttgcagccacaac------ccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggcctt |
539 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| | | ||||| ||| || | |||| | | ||||| || |||||||| |||| || ||| |
|
|
| T |
19812578 |
gggtttgggagaggttcaaaaatttgcaaccacaacaacaaactatgttgatcaaccatggcgacccttttttgtttaggtggcataaggttacggactt |
19812677 |
T |
|
| Q |
540 |
gaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatcca |
639 |
Q |
| |
|
|||||||||||| ||||| || |||||||| || | ||||||||| |||||||||| |||||| ||||| |||||||||| | ||||||||||| |
|
|
| T |
19812678 |
atcaattgacaatgttaggttagcgttagactcggctgtggatgattttctttggcgtccatatgttagatatgccgataagtgtgcattgttttatcca |
19812777 |
T |
|
| Q |
640 |
aaggatgaaactttggtaccatt |
662 |
Q |
| |
|
|| ||||||| || ||||||||| |
|
|
| T |
19812778 |
aatgatgaaatttcggtaccatt |
19812800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 139 - 356
Target Start/End: Original strand, 19956075 - 19956292
Alignment:
| Q |
139 |
acatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaat |
238 |
Q |
| |
|
|||||| | ||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19956075 |
acatcactatggatggatattttcattgataaaggtagtgaaattgaacatgaagcttttcttgctacttggttgtcaatttttgttttccctcataaat |
19956174 |
T |
|
| Q |
239 |
actctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataagga |
338 |
Q |
| |
|
| ||| |||||| ||| |||||||||| ||| ||||||||| |||||||| ||||||||| |||||||||| |||||||| |||||| |||||||||| |
|
|
| T |
19956175 |
attcttccgtgaaaagttatttgtttcctattgttgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagcatatataagga |
19956274 |
T |
|
| Q |
339 |
tttaaggttgtttaagaa |
356 |
Q |
| |
|
||||| ||||| ||||| |
|
|
| T |
19956275 |
tttaactttgttaaagaa |
19956292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 138 - 371
Target Start/End: Complemental strand, 20016329 - 20016096
Alignment:
| Q |
138 |
cacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaa |
237 |
Q |
| |
|
||||||| ||||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20016329 |
cacatcaatgtggatggatatgttcgctgataaaggtagtgaaattgaacatgaagcatttcttgctacttggctgtcaatttttgttttccctcataaa |
20016230 |
T |
|
| Q |
238 |
tactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataagg |
337 |
Q |
| |
|
|||||| |||||| ||| ||||||||| ||||| ||||||| |||||| | ||||||||| |||||||||| ||||| ||||||||| ||||||| | |
|
|
| T |
20016229 |
tactcttccgtgaaaagttgtttgtttccgattgctattcatcttgctagacgaaatcctattgctttggcaccagctgtcttggctagcatatataaag |
20016130 |
T |
|
| Q |
338 |
atttaaggttgtttaagaacacagttgttgattt |
371 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||| |
|
|
| T |
20016129 |
atttaagtttgtttaagaaaacaattgttgattt |
20016096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 148 - 371
Target Start/End: Complemental strand, 20036721 - 20036498
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| | | | |
|
|
| T |
20036721 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
20036622 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
347 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||| |||||||| |||| |||| |||| |||||||||||||| ||||| ||||||||||||||| || |
|
|
| T |
20036621 |
tgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
20036522 |
T |
|
| Q |
348 |
gtttaagaacacagttgttgattt |
371 |
Q |
| |
|
||||||||| ||| |||||||||| |
|
|
| T |
20036521 |
gtttaagaaaacaattgttgattt |
20036498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 138 - 676
Target Start/End: Original strand, 20046113 - 20046651
Alignment:
| Q |
138 |
cacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaa |
237 |
Q |
| |
|
||||||| | ||||||||||| ||||||||||||||||||||| |||| || ||||| || ||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20046113 |
cacatcattatggatggatatgttcatcgataaaggtagtgaaattgaacacgaagccttccttactacttggttgtcaatttttgtttttcctcataaa |
20046212 |
T |
|
| Q |
238 |
tactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataagg |
337 |
Q |
| |
|
| | | |||||| || ||||||| || ||||| || |||| |||||||| ||||| ||| ||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
20046213 |
aa---tatggtgaaaaattgtttgttttctattgctattaatcttgctagaggaaatccaattgctttggcacctgctgttttgggtagcatatataagg |
20046309 |
T |
|
| Q |
338 |
atttaaggttgtttaagaacacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttaatgtacaatcaccctt |
428 |
Q |
| |
|
||||||| || |||||||||||| || ||||| | ||||| ||| ||||| |||||| ||||| | ||| | | | ||||||||| |
|
|
| T |
20046310 |
atttaagtttatttaagaacacaattattgatctgttaaaatatccggttggtggtgatagatttcc-----tgttgaat-ttactattctatcaccctt |
20046403 |
T |
|
| Q |
429 |
ttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataat |
528 |
Q |
| |
|
||| |||||||||||||||| ||||| |||||| ||| || | |||||||||| ||||| |||| | |||| | ||||||| || |||||||| |
|
|
| T |
20046404 |
ttatttggttcaagtttgggtgtgggagaggttcgcaaaattaccaccacaacccatgttgatcaatcccagcgaccctttattgtttaggtggcataag |
20046503 |
T |
|
| Q |
529 |
gttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggag |
628 |
Q |
| |
|
||| | || ||||||||||| ||||| | |||||||||||||||| | ||||||||||| |||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
20046504 |
gttcacgcattgaaaattgataatgttaagttggcattagactcaactgtcgatgattttctttggcgtccatatgttagatatcctgacaagtgtggaa |
20046603 |
T |
|
| Q |
629 |
tgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
| ||||||||||| | |||| || ||||||||||||||| ||||||| |
|
|
| T |
20046604 |
ttttttatccaaataacgaaatttgggtaccatttaagaaggatttgg |
20046651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 148 - 356
Target Start/End: Original strand, 19848990 - 19849198
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| | | | |
|
|
| T |
19848990 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
19849089 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
347 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||| |||||||| |||| |||| |||| |||||||||||||| ||||| ||||||||||||||| || |
|
|
| T |
19849090 |
tgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
19849189 |
T |
|
| Q |
348 |
gtttaagaa |
356 |
Q |
| |
|
||||||||| |
|
|
| T |
19849190 |
gtttaagaa |
19849198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 148 - 676
Target Start/End: Original strand, 19818557 - 19819091
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
|||||||| ||||| || | |||||||| ||| |||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| | | | | |
|
|
| T |
19818557 |
tggatggaaatttttattggtaaaggtaccgaaattgaacatgaagcttttcttgctacttggttatcaatttttgtttttcctcataagaatt---tgg |
19818653 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
347 |
Q |
| |
|
||||| || | ||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||||| | | ||||| |||||||| || |
|
|
| T |
19818654 |
tgaaaaattatctgtttcctgttgctgttaatcttgctagagggaatcctattgctttggcaccggctgttttggctaacatttataaagatttaagttt |
19818753 |
T |
|
| Q |
348 |
gtttaagaacacagttgttgattt--caaaaaatt-------tcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggtt |
438 |
Q |
| |
|
||||||||| | | | |||||||| ||||| ||| | ||||| |||||| |||| || ||| | | |||||||||||||| ||||| |
|
|
| T |
19818754 |
gtttaagaaaaaaatagttgatttgtcaaaatattctgttggtggtgatagatttcc-ttta-----gaacttactcttcaatcacccttttatttggtt |
19818847 |
T |
|
| Q |
439 |
caagtttgggtttgggaaaggttcaaaaatttgca------gccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgtta |
532 |
Q |
| |
|
||| | ||||| ||||| |||||||||||| |||| ||||||| ||| ||||| || || |||||| | | ||||| || |||||| ||||| |
|
|
| T |
19818848 |
caaatatgggtgtgggagaggttcaaaaatatgcaaccactgccacaaaccatgttgataaaccatggagacccttttttgtttaggtggcatgatgttc |
19818947 |
T |
|
| Q |
533 |
aggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgtt |
632 |
Q |
| |
|
|||||||| ||||||||||||| ||| ||||||||||||| || | ||||| ||| |||||||||| ||||||| |||| ||||||||||| |||| |
|
|
| T |
19818948 |
aggccttggaaattgacaatgttaggatggcattagactcggctaaggatgactttctttggcgtccatatgttcgatattctgataagtgtgagctgtt |
19819047 |
T |
|
| Q |
633 |
ttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
|||||| || |||| || ||||||||||||||||| ||||||| |
|
|
| T |
19819048 |
ttatccgaatgatggaattttggtaccatttaagatggatttgg |
19819091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 418 - 706
Target Start/End: Complemental strand, 20016046 - 20015761
Alignment:
| Q |
418 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
517 |
Q |
| |
|
||||||||| |||| |||||||| ||||||| ||||| |||||||||| ||| || |||||||||| ||||| |||| || ||||| | ||||||| | |
|
|
| T |
20016046 |
caatcacccatttatttggttcaaatttgggtgtgggagaggttcaaaattttacaaccacaacccatgttgatcaatcatgaagaccctttattgttta |
20015947 |
T |
|
| Q |
518 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttca-atatgttg |
616 |
Q |
| |
|
| |||||||| ||| |||| ||||||||||||||||| | | |||||||||||||||| || ||||||||| |||||||||| ||| |||| ||||| || |
|
|
| T |
20015946 |
ggtggcataaggttcaggctttgaaaattgacaatgttatggtggcattagactcagctattgatgattttctttggcgtccatat-ttcagatatgctg |
20015848 |
T |
|
| Q |
617 |
ataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
706 |
Q |
| |
|
||||||||| ||||||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||||| ||||| |
|
|
| T |
20015847 |
ataagtgtgatttgttttatccaaatgatgcattttttgtaccatttaagaaagatttgg--ata-aacaaatgctctcatttgttatat |
20015761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 418 - 676
Target Start/End: Original strand, 19956357 - 19956615
Alignment:
| Q |
418 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
517 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||| || || | ||| | | ||||| | |
|
|
| T |
19956357 |
caatcacccttttacttggttcaaatttgggtgtgggaaaggttcaaaaatttacagccacaacccatgttgttgaaccataggaacccttttttgttta |
19956456 |
T |
|
| Q |
518 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttga |
617 |
Q |
| |
|
| |||||||| |||||| |||||| | |||||||||| ||| ||||||||||||| || || ||||| ||| |||||||||| ||||||| |||| | | |
|
|
| T |
19956457 |
ggtggcataaggttaagcccttgatagttgacaatgttaggatggcattagactcggctatggatgactttctttggcgtccatatgttcgatattctca |
19956556 |
T |
|
| Q |
618 |
taagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
||| ||||| | ||||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
19956557 |
taaatgtgggctattttatccaaatgatgaaattttggtaccatttaagaaggatttgg |
19956615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 139 - 356
Target Start/End: Original strand, 19838384 - 19838601
Alignment:
| Q |
139 |
acatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaat |
238 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||||||||||||| ||| || || |
|
|
| T |
19838384 |
acatcactatggatggatattttcatcgataaaggtagcgaaattgaacatgaagcttttctagctacttggttgtcaatttttgtttttcctaatcaac |
19838483 |
T |
|
| Q |
239 |
actctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataagga |
338 |
Q |
| |
|
||||| |||||| | | ||||||||| ||| ||||||||| |||||||| ||| ||||| |||||||||| |||||||| |||||| ||||||| || |
|
|
| T |
19838484 |
actcttgcgtgaaaagctttttgtttccaattgttgttcatcttgctagaggaaattctattgctttggcaccagctgttttagctagcatatataatga |
19838583 |
T |
|
| Q |
339 |
tttaaggttgtttaagaa |
356 |
Q |
| |
|
||||| ||||| ||||| |
|
|
| T |
19838584 |
tttaactttgttaaagaa |
19838601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 424 - 676
Target Start/End: Original strand, 17114992 - 17115244
Alignment:
| Q |
424 |
cccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggc |
523 |
Q |
| |
|
||||||||| |||||||| ||||| | ||||| |||||||||||||| || |||||| ||| ||||| ||| || |||||| | ||||||| || |||| |
|
|
| T |
17114992 |
cccttttacttggttcaaatttggatgtgggagaggttcaaaaatttacaaccacaatccatgttgatcaaccatggagaccctttattgtttaggtggc |
17115091 |
T |
|
| Q |
524 |
ataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtg |
623 |
Q |
| |
|
||| ||| ||||| |||||||||||||||| | | | |||||||||| ||| ||||||||||| |||||||||| || || ||||| ||||||||| |
|
|
| T |
17115092 |
atagggttcaggccgtgaaaattgacaatgttaagctagcattagacttagctgtcgatgattttctttggcgtccatacattagatatgctgataagtg |
17115191 |
T |
|
| Q |
624 |
tggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
|||| ||||||||||||| ||||||| |||||||||||| || |||||||||| |
|
|
| T |
17115192 |
tggaatgttttatccaaatgatgaaattttggtaccattcaaaaaagatttgg |
17115244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 418 - 706
Target Start/End: Original strand, 19951394 - 19951682
Alignment:
| Q |
418 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
517 |
Q |
| |
|
||||||||||||||| |||||||| ||||| ||||||| ||||| |||||||| || |||||||||| | || || || |||||| | | ||||| | |
|
|
| T |
19951394 |
caatcacccttttacttggttcaaatttggatttgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgttta |
19951493 |
T |
|
| Q |
518 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttga |
617 |
Q |
| |
|
| |||||||| |||||| |||||| ||| || |||| ||||| ||||||||| |||| || | |||||||||||||||||| |||||| ||||| ||| |
|
|
| T |
19951494 |
ggtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatgggtgattttatttggcgtccatatgttagatatgctga |
19951593 |
T |
|
| Q |
618 |
taagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
706 |
Q |
| |
|
|||||||||| |||||||||| || || |||| |||||| |||||||||||||||||||| | |||||||| | ||||||| ||||| |
|
|
| T |
19951594 |
taagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttgtcatttgttatat |
19951682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 545 - 700
Target Start/End: Original strand, 26652115 - 26652270
Alignment:
| Q |
545 |
ttgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaagga |
644 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| || |
|
|
| T |
26652115 |
ttgacaatgtgaggttggcattagattcagctatcaatgattttatttggcgtccttatgttcggtatgcagataagtgtgaagtgttttatccaaatga |
26652214 |
T |
|
| Q |
645 |
tgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttg |
700 |
Q |
| |
|
| |||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
26652215 |
cggaactttggtaccatttaagaaagatttggtggatatacaaatgctctcatttg |
26652270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 418 - 667
Target Start/End: Original strand, 19838666 - 19838915
Alignment:
| Q |
418 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
517 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||| | |||| || | | |||| | | ||||| | |
|
|
| T |
19838666 |
caatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaaccaatgttgttgaaccagggggacccttttttgttta |
19838765 |
T |
|
| Q |
518 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttga |
617 |
Q |
| |
|
| |||||||| ||||||||||||| |||||||||| | ||| |||| |||||||| || || ||||| ||| |||||||||| ||||||| |||| ||| |
|
|
| T |
19838766 |
ggtggcataaagttaaggccttgataattgacaatattaggatggctttagactcggctatggatgactttctttggcgtccatatgttcgatattctga |
19838865 |
T |
|
| Q |
618 |
taagtgtggagtgttttatccaaaggatgaaactttggtaccatttaaga |
667 |
Q |
| |
|
|||||||| | ||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
19838866 |
taagtgtgaactgttttatccaaatgatgaaattttggtaccatttaaga |
19838915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 419 - 664
Target Start/End: Complemental strand, 20036447 - 20036202
Alignment:
| Q |
419 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgag |
518 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||||| |||| || || | |||| | | ||||| || |
|
|
| T |
20036447 |
aatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
20036348 |
T |
|
| Q |
519 |
atggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgat |
618 |
Q |
| |
|
|||||||| |||||| |||||| ||||||||||| ||| ||||||||||||| || || ||||| ||| |||||||||| ||||||| |||| |||| |
|
|
| T |
20036347 |
gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgtccatatgttcgatattctgat |
20036248 |
T |
|
| Q |
619 |
aagtgtggagtgttttatccaaaggatgaaactttggtaccattta |
664 |
Q |
| |
|
|||| || | || |||||||||| |||||||||||||||||||||| |
|
|
| T |
20036247 |
aagtttgaactgctttatccaaatgatgaaactttggtaccattta |
20036202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 214 - 399
Target Start/End: Original strand, 19971677 - 19971862
Alignment:
| Q |
214 |
tcaatttttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctg |
313 |
Q |
| |
|
|||||||||||||| |||||| ||||| | |||||||| |||||||||||||| ||||| ||||| | | |||||| ||| ||||| |||||||||| |
|
|
| T |
19971677 |
tcaatttttgttttttctcatagatactttatagtgaaaagttctttgtttcctattgctattcatttggttagaggcaatactattgctttggcaccaa |
19971776 |
T |
|
| Q |
314 |
ctgttttggctagcttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttcccttt |
399 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||| | |||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
19971777 |
ctgttttggctagcttatataaggattgaactctgtttaagaaacaaattgttgatttgaaaaaatatcctgataaatttcccttt |
19971862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 148 - 342
Target Start/End: Original strand, 19989522 - 19989716
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactc-tcta |
246 |
Q |
| |
|
||||||||| ||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| | || | | |
|
|
| T |
19989522 |
tggatggatgttttcattgataaaggtaatgaacttgaacatgaagcatttcttgctacttggttgtcaatttttgttcatccttataaa-agtcgtgtt |
19989620 |
T |
|
| Q |
247 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggattta |
342 |
Q |
| |
|
||||| ||||||| |||| ||||||| ||||||| |||||||| ||||||||| | || |||||||| ||||||||||| || |||||||||||| |
|
|
| T |
19989621 |
gtgaatagttctttctttcgtgttgctattcatcttgctagaggaaatcctattgcattagcacctgcagttttggctagtttgtataaggattta |
19989716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 419 - 646
Target Start/End: Original strand, 19849264 - 19849497
Alignment:
| Q |
419 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgca------gccacaacccaagttgagcaataatcgagaccatgtatt |
512 |
Q |
| |
|
||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||| ||||||| ||| ||||| ||| || | || | | |||| |
|
|
| T |
19849264 |
aatcacccttttatttggttcaaatttgggtgtgggagaggttcaaaaatttgcaaccacagccacaaaccatgttgaccaaccatggggatcctttatt |
19849363 |
T |
|
| Q |
513 |
gttgagatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatat |
612 |
Q |
| |
|
||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||| | |||| |
|
|
| T |
19849364 |
gtttagatggcataaggttcaggccttgaaaattgacaatgttaggttggcattagactcggctatggatgattttctttggcgtccatatgctagatat |
19849463 |
T |
|
| Q |
613 |
gttgataagtgtggagtgttttatccaaaggatg |
646 |
Q |
| |
|
| | |||| | |||| ||||||||||||| |||| |
|
|
| T |
19849464 |
gctcataattatggaatgttttatccaaatgatg |
19849497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 20005230 - 20005109
Alignment:
| Q |
36 |
tcctgttttcgcccagcttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggacttcgaaaggtatggcacct |
135 |
Q |
| |
|
|||||||||| |||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||||| | | |
|
|
| T |
20005230 |
tcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattgaaagccaagagaggatttcaaaaggtatggcgctt |
20005131 |
T |
|
| Q |
136 |
tccacatcagtgtggatggata |
157 |
Q |
| |
|
|||||||| |||||| |||||| |
|
|
| T |
20005130 |
tccacatcggtgtgggtggata |
20005109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 418 - 676
Target Start/End: Original strand, 19832142 - 19832400
Alignment:
| Q |
418 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgaga-ccatgtattgttg |
516 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||||| |||| || || | || |||| | ||||| |
|
|
| T |
19832142 |
caatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacatccacaacccatgttgttgaacaaaggggaaccattt-ttgttt |
19832240 |
T |
|
| Q |
517 |
agatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttg |
616 |
Q |
| |
|
|| |||||||| |||||||||||| |||||||||||| ||| |||||||||||| || | ||||| ||| |||||||||| ||||||| |||| || |
|
|
| T |
19832241 |
aggtggcataaggttaaggccttggtaattgacaatgttaggatggcattagacttggctaaggatgactttctttggcgtccatatgttcgatattctg |
19832340 |
T |
|
| Q |
617 |
ataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
||||||||| |||||||||| || |||| || ||||||||||||||||| ||||||| |
|
|
| T |
19832341 |
ataagtgtgagctgttttatccgaatgatggaattttggtaccatttaagatggatttgg |
19832400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 148 - 371
Target Start/End: Original strand, 19951124 - 19951344
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||| |||||||| || |||| ||||||||||||| |||||||||| ||| |||| | | | | |
|
|
| T |
19951124 |
tggatggatattttcactgataaaggtagtgaaattgaacatgaagccttccttgttacttggttgtcactttttgtttttcctaataataaat---tgg |
19951220 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
347 |
Q |
| |
|
||| ||| || | | ||| ||||| ||||||| |||||||| ||||||||| ||||||| || |||||||| |||||| ||||||||||||||| || |
|
|
| T |
19951221 |
tgaggagttattcgctacctattgctattcatcttgctagaggaaatcctattgctttggctccagctgttttagctagcatatataaggatttaacttt |
19951320 |
T |
|
| Q |
348 |
gtttaagaacacagttgttgattt |
371 |
Q |
| |
|
|||||| || || |||||||||| |
|
|
| T |
19951321 |
gtttaaaaaagcaattgttgattt |
19951344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 30914651 - 30914728
Alignment:
| Q |
156 |
tattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctca |
233 |
Q |
| |
|
||||||||| ||||||| ||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30914651 |
tattttcattgataaagttagtgaaattgaacatgaagcattccttactacttggttgtcaatttttgttttccctca |
30914728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 346 - 444
Target Start/End: Original strand, 26652015 - 26652116
Alignment:
| Q |
346 |
ttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatg---tacaatcacccttttacctggttcaag |
442 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||| ||||||||||||| |||| ||||||| ||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
26652015 |
ttgtttaagaaaacacttgttgatttgaaaaaatgtcctgataaattttccttgttgttggaggttaatgtactacaatcacccttttacttggttcaag |
26652114 |
T |
|
| Q |
443 |
tt |
444 |
Q |
| |
|
|| |
|
|
| T |
26652115 |
tt |
26652116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 418 - 657
Target Start/End: Original strand, 19989795 - 19990040
Alignment:
| Q |
418 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
517 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||| | ||| ||| || ||||| | | ||||| | |
|
|
| T |
19989795 |
caatcacccttttacttggttcaagtttgggtttgggagaggttcaaaaatttacaaccacaacccatgctgatcaactatgaagacccttttttgttta |
19989894 |
T |
|
| Q |
518 |
gatggcataatgttaaggc------cttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaata |
611 |
Q |
| |
|
| |||||||||| | || ||| || |||||||||| ||||||| |||| ||||||| | || ||||| |||||||||| |||||| || |
|
|
| T |
19989895 |
ggtggcataatgctgagagtgagaacttaaatgttgacaatgttaggttggaattaaactcagcaaagaatcattttctttggcgtccatatgttagatt |
19989994 |
T |
|
| Q |
612 |
tgttgataagtgtggagtgttttatccaaaggatgaaactttggta |
657 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||| |||| ||||| |||| |
|
|
| T |
19989995 |
tgctgagaagtgtgaactgttttatccaaatgatggaacttgggta |
19990040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 609 - 706
Target Start/End: Complemental strand, 20033991 - 20033894
Alignment:
| Q |
609 |
atatgttgataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
706 |
Q |
| |
|
||||| |||||||||| || |||||||||| || ||||||| || |||||||||||||| |||||||| | |||||||||| ||||||| ||||| |
|
|
| T |
20033991 |
atatgctgataagtgtagactgttttatccgaatgatgaaatttcagtaccatttaagaatgatttggtggatcaacaaatgctgtcatttgttatat |
20033894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 177; Significance: 5e-95; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 147 - 649
Target Start/End: Complemental strand, 22689774 - 22689290
Alignment:
| Q |
147 |
gtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatac-tctct |
245 |
Q |
| |
|
|||||||||| ||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | | || |
|
|
| T |
22689774 |
gtggatggatgttttcatcgataatggtaatgaatttgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaaaatatgtcg |
22689675 |
T |
|
| Q |
246 |
agtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaagg |
345 |
Q |
| |
|
|| ||| ||||||||||| || || || ||||||| |||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
22689674 |
-gtcaaaagttctttgtttactatttctattcatctggctagaggcaatactattgctttggcacctgctgttttggctagcatatataaggatttgagt |
22689576 |
T |
|
| Q |
346 |
ttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagttt |
445 |
Q |
| |
|
||||||||||| | |||||||||||||||||| ||||| | || |||||| | ||||||||||||||| |||||||||||| |
|
|
| T |
22689575 |
ttgtttaagaaacaaattgttgatttcaaaaaatgtcctgtt------------------gatgttaatctgcaatcacccttttacttggttcaagttt |
22689494 |
T |
|
| Q |
446 |
gggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaat |
545 |
Q |
| |
|
|||| ||||| ||||||||||||||||| |||| |||| ||||| ||||| | |||||||||||| |||| |||||| ||||| || |||||||| |
|
|
| T |
22689493 |
gggtgtgggagaggttcaaaaatttgcaaccacggcccatgttgatcaatagtgaagaccatgtattattgaagtggcatttggttaatgctttgaaaat |
22689394 |
T |
|
| Q |
546 |
tgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggat |
645 |
Q |
| |
|
|||||||||||||||| | || || ||| | | ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22689393 |
tgacaatgtgaggttgacgttggattcaactgttgataattttatttggcgtccttatgttagatatgctgataagtgtggagtgttttatccaaaggat |
22689294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 387 - 676
Target Start/End: Original strand, 11544312 - 11544601
Alignment:
| Q |
387 |
taaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaag |
486 |
Q |
| |
|
||||||||| || | |||||| ||| |||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |
|
|
| T |
11544312 |
taaatttccattgaagttggaggttgatgtgcaatcacccatttacttggttcaagtttgggtttgggagaggttcaaaaatttgcaaccaaaacccaag |
11544411 |
T |
|
| Q |
487 |
ttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgatt |
586 |
Q |
| |
|
|||| ||| ||| ||||||||||| || |||| |||||| ||||| ||||||||||||| |||||||||||||||||||| ||||| | ||||||| |
|
|
| T |
11544412 |
ttgatcaacaatggagaccatgtactgatgaggtggcatttggttaaacccttgaaaattgataatgtgaggttggcattagattcagctaaggatgatt |
11544511 |
T |
|
| Q |
587 |
ttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
|| ||||||| || ||||||||||||| ||||||| || | ||||||||||||| ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
11544512 |
ttctttggcgcccatatgttcaatatgccgataagtttgaaatgttttatccaaatgatgaaactttggtaccgcttaagaaggatttgg |
11544601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 246 - 371
Target Start/End: Complemental strand, 22651913 - 22651788
Alignment:
| Q |
246 |
agtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaagg |
345 |
Q |
| |
|
||||||| ||| |||||||||| ||||||||||||| |||||||| ||||||||| |||| ||||| ||||||||||||||| | ||||||||||||| |
|
|
| T |
22651913 |
agtgaaaagttgtttgtttcctattgctgttcatcttgctagaggaaatcctattgcttttgcaccagctgttttggctagcatgtataaggatttaact |
22651814 |
T |
|
| Q |
346 |
ttgtttaagaacacagttgttgattt |
371 |
Q |
| |
|
||||||||||| ||| |||||||||| |
|
|
| T |
22651813 |
ttgtttaagaaaacaattgttgattt |
22651788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 22652206 - 22652113
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatact |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||||||| || ||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
22652206 |
tggatggatattttcatcgataaaggtagtgaaattgaacatgaagcgttccttgctacttggttgtcaatttttgtttttgctcatagatact |
22652113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 168 - 307
Target Start/End: Complemental strand, 22685778 - 22685642
Alignment:
| Q |
168 |
taaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtgaaatgttctttgtttcct |
267 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| | | |||||| |||| ||||||| |
|
|
| T |
22685778 |
taaaggtagtgaaattgagcatgaagcatttcttgctgcttggttgtcactttttgtttttcctcataaa---attttggtgaaaacttctatgtttccg |
22685682 |
T |
|
| Q |
268 |
gttgctgttcatctagctagagggaatcctatttctttgg |
307 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| |||||| |
|
|
| T |
22685681 |
attgctattcatcttgctagagggaatcctattgctttgg |
22685642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 254 - 473
Target Start/End: Complemental strand, 11564146 - 11563918
Alignment:
| Q |
254 |
gttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaa |
353 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||| || |||||| |||| ||||| | ||| ||||| |||||||||||||||| | |||||||| |
|
|
| T |
11564146 |
gttctttgtttcctattgctgttcatcttgctagaggaaaacctattgctttagcaccgtcggttctggcttgcttatataaggatttgcgtttgtttaa |
11564047 |
T |
|
| Q |
354 |
gaacacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtt |
444 |
Q |
| |
|
| | ||| |||||| || | |||| | | || ||||||||| || | | |||| |||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
11564046 |
ggagacaattgttggattgacaaaaactacaacagaaggtgctaaatttccattgaaggtggaggttaatgtacaatcacccatttacttggttaaagtt |
11563947 |
T |
|
| Q |
445 |
tgggtttgggaaaggttcaaaaatttgca |
473 |
Q |
| |
|
||| ||||||| ||||||||||||||||| |
|
|
| T |
11563946 |
tggctttgggagaggttcaaaaatttgca |
11563918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 676
Target Start/End: Complemental strand, 22655985 - 22655903
Alignment:
| Q |
594 |
gcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
|||||| ||||||| |||| ||||||||| | |||||||||| || ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
22655985 |
gcgtccatatgttcgatattctgataagtgcgagctgttttatcctaatgatgaaattttggtaccatttaagaaggatttgg |
22655903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 140; Significance: 6e-73; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 148 - 676
Target Start/End: Original strand, 9815037 - 9815565
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
||||||||| |||||||||| |||||||||||| ||||||||||||| || ||||||| ||||||||||| |||||||| ||||||||| || | | |
|
|
| T |
9815037 |
tggatggattttttcatcgacaaaggtagtgaaattgagcatgaagcgttcattgctacgtggttgtcaatctttgttttaactcataaat---ctttgg |
9815133 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
347 |
Q |
| |
|
||||| ||||||||||| || ||||| ||||||| |||||||| ||| ||||| |||||||||| |||||||| ||||| | ||||| |||||||| || |
|
|
| T |
9815134 |
tgaaaagttctttgttttctattgctattcatcttgctagaggaaattctattgctttggcaccagctgttttagctagtatttataacgatttaagttt |
9815233 |
T |
|
| Q |
348 |
gtttaagaacacagttgttgatttcaaaaaatttcctg---------ataaatttccctttatgttggacgttaatgtacaatcacccttttacctggtt |
438 |
Q |
| |
|
||||||||| ||| | ||| |||| |||||| ||| ||| || ||| |||| || |||| | | ||||||||||||||| ||||| |
|
|
| T |
9815234 |
gtttaagaaaacaatagttaatttgtcaaaattatctgttggtggtgatagatatcc-ttta-----gaagttactcttcaatcacccttttacttggtt |
9815327 |
T |
|
| Q |
439 |
caagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggcct |
538 |
Q |
| |
|
||| ||||||| ||||| |||||| ||||||| |||||| |||||| ||||| |||| | |||||| | ||||||| || || ||||| ||| |||||| |
|
|
| T |
9815328 |
caaatttgggtgtgggagaggttccaaaatttacagccagaacccatgttgatcaatcacggagaccctttattgtttaggtgacataaggttcaggcct |
9815427 |
T |
|
| Q |
539 |
tgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatcc |
638 |
Q |
| |
|
|||||||||||||||| | | ||||||||||||| || || ||||||||| |||||||||| ||| || ||||| |||||| || || ||||||||||| |
|
|
| T |
9815428 |
tgaaaattgacaatgttaagctggcattagactcggctatggatgattttctttggcgtccatattttagatatgctgataactgcggtgtgttttatcc |
9815527 |
T |
|
| Q |
639 |
aaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||| |
|
|
| T |
9815528 |
aaatgatgcgcttttggtaccatttaagaaagatttgg |
9815565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 148 - 706
Target Start/End: Complemental strand, 26355045 - 26354487
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||| | ||||||| |||||||||||||| ||| |||| | | | |
|
|
| T |
26355045 |
tggatggatgttttcatggataaaggtagtgaagttgaacatgaagcattcattgttgcttggttatcaatttttgtttttcctagaaaatgcatgttgg |
26354946 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
347 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||||| |||||||| ||| ||||| |||||||||| |||||||| |||||| |||||||||||||||| | |
|
|
| T |
26354945 |
tgaaaagttctttgtttcctattgctattcatcttgctagaggaaattctattgctttggcaccggctgttttagctagcatatataaggatttaagcgt |
26354846 |
T |
|
| Q |
348 |
gtttaagaacacagttgttgatttcaaaaaatttcctg---------ataaatttccctttatgttggacgttaatgtacaatcacccttttacctggtt |
438 |
Q |
| |
|
||||||||| || |||||||||| |||||| ||| ||| || ||| |||| || |||| | | |||||||| |||||| ||||| |
|
|
| T |
26354845 |
gtttaagaaaaccattgttgatttgtcaaaattatctgttggtggtgatagatatcc-ttta-----gaagttactcttcaatcaccgttttacttggtt |
26354752 |
T |
|
| Q |
439 |
caagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggcct |
538 |
Q |
| |
|
||| ||||||| ||||| ||||||||||| || || || ||||||| ||||| ||| | |||||| | ||||||| |||||||||| || | |||| |
|
|
| T |
26354751 |
caaatttgggtgtgggagaggttcaaaaaattacaaccgcaacccatgttgatcaaccgtggagaccctttattgtttagatggcatagggtacaagcct |
26354652 |
T |
|
| Q |
539 |
tgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatcc |
638 |
Q |
| |
|
|||||||||||||||| | | ||| |||||||| || ||| |||||||| |||||||||| ||| || ||||| ||| | ||||| || |||||||| |
|
|
| T |
26354651 |
tgaaaattgacaatgttaagctggaattagacttggctatcaatgattttctttggcgtccatattttagatatgcagatgaatgtggtgtattttatcc |
26354552 |
T |
|
| Q |
639 |
aaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
706 |
Q |
| |
|
||| |||| || || ||||||||||||||||||||||| || |||||||||||||||||| ||||| |
|
|
| T |
26354551 |
aaatgatgcaatttcggtaccatttaagaaagatttgg--ata-aacaaatgctctcatttgttatat |
26354487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 95; Significance: 4e-46; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 148 - 356
Target Start/End: Original strand, 1717214 - 1717419
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
||||||||| |||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||| || | | |
|
|
| T |
1717214 |
tggatggatgtttttgttgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcggtttatgtttttcctcataaag---ctttgg |
1717310 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
347 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| |||||||| |||||| ||||||||||||||| || |
|
|
| T |
1717311 |
tgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaacttt |
1717410 |
T |
|
| Q |
348 |
gtttaagaa |
356 |
Q |
| |
|
||||||||| |
|
|
| T |
1717411 |
gtttaagaa |
1717419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 537 - 706
Target Start/End: Original strand, 1717609 - 1717778
Alignment:
| Q |
537 |
cttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttat |
636 |
Q |
| |
|
|||||||||||| |||| |||||| ||||||||||||| || |||||||||||||||||||| |||||| ||||| ||||||| ||||| |||||||| |
|
|
| T |
1717609 |
cttgaaaattgaagatgttaggttgacattagactcagctattgatgattttatttggcgtccatatgttagatatgctgataagcgtggaatgttttat |
1717708 |
T |
|
| Q |
637 |
ccaaaggatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgctatat |
706 |
Q |
| |
|
||| | ||||||| ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| |
|
|
| T |
1717709 |
ccatatgatgaaattttggtaccatttaagaaagatttggtggatgaacaaatgctgtcatttgttatat |
1717778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 581 - 706
Target Start/End: Original strand, 38483409 - 38483531
Alignment:
| Q |
581 |
atgattttatttggcgtccttatgttcaatatgttgataagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggtagt |
680 |
Q |
| |
|
|||||||| ||| |||||| ||| || ||||| |||||||||||| ||||||||| ||| |||| | ||||||||| ||||||||| |||||| | |
|
|
| T |
38483409 |
atgattttctttagcgtccatattttagatatgatgataagtgtggtttgttttatcaaaatgatgcacttttggtaccgtttaagaaatatttgg--at |
38483506 |
T |
|
| Q |
681 |
agaacaaatgctctcatttgctatat |
706 |
Q |
| |
|
| |||||||||||||||||| ||||| |
|
|
| T |
38483507 |
a-aacaaatgctctcatttgttatat |
38483531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 552 - 676
Target Start/End: Complemental strand, 39191724 - 39191598
Alignment:
| Q |
552 |
tgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataa-gtgtggag-tgttttatccaaaggatgaaa |
649 |
Q |
| |
|
||||||||||||||| || || || | ||||||||| |||||||||| ||||||||||||| |||||| |||| || ||||||||||||||||||||| |
|
|
| T |
39191724 |
tgtgaggttggcattggattcggctaaggatgattttctttggcgtccatatgttcaatatgctgataaagtgtagaaatgttttatccaaaggatgaaa |
39191625 |
T |
|
| Q |
650 |
ctttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
|||||||||| ||||||| ||||||| |
|
|
| T |
39191624 |
ctttggtaccgcttaagaaggatttgg |
39191598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 148 - 356
Target Start/End: Original strand, 6398261 - 6398468
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
247 |
Q |
| |
|
||||||||||| || ||| |||||||||||||| |||| |||||||| || ||||||| |||||||| |||||||||||| ||| |||| | | | |
|
|
| T |
6398261 |
tggatggatatgtttatctataaaggtagtgaaattgaacatgaagccttccttgctaattggttgttaatttttgtttttcctagtaaa---acaatgg |
6398357 |
T |
|
| Q |
248 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagc--ttatataaggatttaagg |
345 |
Q |
| |
|
||||| ||| ||||||| || |||||||| |||| |||||||| ||||| || ||||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
6398358 |
tgaaaagttgtttgttttctattgctgttaatctcgctagaggaaatccaatcggtttggcaccagctgttttagctagcatatatataaggatttaact |
6398457 |
T |
|
| Q |
346 |
ttgtttaagaa |
356 |
Q |
| |
|
|| |||||||| |
|
|
| T |
6398458 |
ttatttaagaa |
6398468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 6397856 - 6397767
Alignment:
| Q |
148 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaa |
237 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||| |||||||| || |||||||| ||||||||||||| || ||| |||| |||| |
|
|
| T |
6397856 |
tggatggatatgttcatcgataaaggtagtgaaattgaacatgaagccttccttgctacctggttgtcaatttgtgcttttcctcctaaa |
6397767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 676
Target Start/End: Complemental strand, 6397478 - 6397324
Alignment:
| Q |
524 |
ataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtg |
623 |
Q |
| |
|
|||| ||| ||||||| |||||||||||| | | |||||||| ||||||| | ||||| ||||| |||||||||| |||||| |||| ||| ||||| |
|
|
| T |
6397478 |
ataaggttcaggcctttaaaattgacaatattaagttggcatgagactcaactgtcgataattttctttggcgtccatatgttagatatcctgagaagtg |
6397379 |
T |
|
| Q |
624 |
tggagt--gttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
|||| | ||||||||||| | |||| ||||||||||||||||| ||||||| |
|
|
| T |
6397378 |
tggaattctttttatccaaataacgaaatcttggtaccatttaagaaggatttgg |
6397324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 6397732 - 6397634
Alignment:
| Q |
273 |
tgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacagttgttgattt |
371 |
Q |
| |
|
|||| |||| ||||||| ||||| ||| |||||||||| |||||||||||| | |||||||||||||| || |||||||| ||| || ||||||| |
|
|
| T |
6397732 |
tgttaatcttgctagagaaaatccaattgctttggcaccatctgttttggctatcatatataaggatttatctttatttaagaaaacaattattgattt |
6397634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 6398537 - 6398606
Alignment:
| Q |
421 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttga |
490 |
Q |
| |
|
||||| |||||| |||||||||||| ||| ||||| ||||||| ||| ||||| ||||||| || ||||| |
|
|
| T |
6398537 |
tcacctttttacgtggttcaagtttaggtgtgggagaggttcacaaacttgcaaccacaactcatgttga |
6398606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000007; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 12580143 - 12579995
Alignment:
| Q |
204 |
tacttggttgtcaatttttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttct |
303 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | | |||| | ||| ||||||| |||||| |||| |||| |||||| | ||||| |||||| |
|
|
| T |
12580143 |
tacttggttgtcaatttttgtttttcctcataaaaa----atggtgacaagttgtttgttttctgttggtgttaatcttgctagaagaaatccaatttct |
12580048 |
T |
|
| Q |
304 |
ttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaa |
356 |
Q |
| |
|
|||| | ||||||||||||| || |||||||||||| || |||||||| |
|
|
| T |
12580047 |
ttggtggcaattgttttggctagcataaataaggatttaacattatttaagaa |
12579995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 12581426 - 12581476
Alignment:
| Q |
182 |
ttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctc |
232 |
Q |
| |
|
|||| |||||||| || ||||||||||||||||||||||||||||| |||| |
|
|
| T |
12581426 |
ttgaacatgaagccttccttgctacttggttgtcaatttttgtttttcctc |
12581476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 12497243 - 12497296
Alignment:
| Q |
182 |
ttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcata |
235 |
Q |
| |
|
|||| |||||||| || |||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
12497243 |
ttgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcata |
12497296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 12521108 - 12521161
Alignment:
| Q |
182 |
ttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcata |
235 |
Q |
| |
|
|||| |||||||| || |||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
12521108 |
ttgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcata |
12521161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 676
Target Start/End: Complemental strand, 12495734 - 12495578
Alignment:
| Q |
524 |
ataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatgattttatttggcgtccttatgttcaatatgttgataagtg |
623 |
Q |
| |
|
|||| ||| |||||||| ||||||||||||| ||| |||||||||||| || |||||||| |||||||||| |||| | |||| ||| ||||| |
|
|
| T |
12495734 |
ataaggttcaggccttgcaaattgacaatgttcagtttgcattagactcaagtgtcaatgattttctttggcgtccatatgctagatatcctgagaagtg |
12495635 |
T |
|
| Q |
624 |
tgga----gtgttttatccaaaggatgaaactttggtaccatttaagaaagatttgg |
676 |
Q |
| |
|
|||| | ||||||||||| |||||| || ||||||||||||||| ||||||| |
|
|
| T |
12495634 |
tggaattttttttttatccaaataatgaaatttgggtaccatttaagaaggatttgg |
12495578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 12497482 - 12497614
Alignment:
| Q |
421 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagat |
520 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |||| ||| || ||| ||||| ||||||| || ||||| ||| | ||| ||| |||||||||| | |
|
|
| T |
12497482 |
tcacctttttacttggttcatgtttgggtt-gggagaggctcgcaaacttgcaaccacaactcatgttgatcaaccacatagaacatttattgttgaggt |
12497580 |
T |
|
| Q |
521 |
ggcataatgttaaggccttgaaaattgacaatgt |
554 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||| |
|
|
| T |
12497581 |
ggcataaggttctggccttgaaaattggcaatgt |
12497614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 12521347 - 12521479
Alignment:
| Q |
421 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagat |
520 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |||| ||| || ||| ||||| ||||||| || ||||| ||| | ||| ||| |||||||||| | |
|
|
| T |
12521347 |
tcacctttttacttggttcatgtttgggtt-gggagaggctcgcaaacttgcaaccacaactcatgttgatcaaccacatagaacatttattgttgaggt |
12521445 |
T |
|
| Q |
521 |
ggcataatgttaaggccttgaaaattgacaatgt |
554 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||| |
|
|
| T |
12521446 |
ggcataaggttctggccttgaaaattggcaatgt |
12521479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University