View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20288_high_9 (Length: 344)

Name: NF20288_high_9
Description: NF20288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20288_high_9
NF20288_high_9
[»] chr3 (20 HSPs)
chr3 (1-327)||(26986142-26986468)
chr3 (57-139)||(1458539-1458620)
chr3 (92-159)||(37341241-37341307)
chr3 (115-169)||(29955116-29955170)
chr3 (115-169)||(30004270-30004324)
chr3 (93-150)||(11532491-11532548)
chr3 (109-182)||(29955032-29955105)
chr3 (109-182)||(30004186-30004259)
chr3 (58-96)||(44890438-44890476)
chr3 (58-169)||(799260-799373)
chr3 (110-167)||(3901508-3901565)
chr3 (46-105)||(37189235-37189295)
chr3 (110-169)||(3901566-3901625)
chr3 (55-104)||(3901585-3901635)
chr3 (58-96)||(19560730-19560768)
chr3 (46-96)||(31205357-31205407)
chr3 (46-96)||(35357305-35357355)
chr3 (44-104)||(32880983-32881044)
chr3 (65-157)||(55196241-55196334)
chr3 (109-197)||(1753295-1753383)
[»] chr6 (9 HSPs)
chr6 (58-201)||(1473590-1473735)
chr6 (67-143)||(28865443-28865520)
chr6 (61-112)||(24110066-24110118)
chr6 (46-104)||(1473603-1473662)
chr6 (46-96)||(4787818-4787868)
chr6 (46-96)||(17600706-17600756)
chr6 (107-143)||(3150242-3150278)
chr6 (109-149)||(11650916-11650956)
chr6 (129-197)||(12731533-12731601)
[»] chr4 (17 HSPs)
chr4 (57-143)||(34119639-34119726)
chr4 (46-112)||(21433861-21433928)
chr4 (46-150)||(993243-993348)
chr4 (102-198)||(21433938-21434034)
chr4 (46-104)||(21433965-21434024)
chr4 (94-169)||(31758694-31758769)
chr4 (69-112)||(41840676-41840720)
chr4 (46-104)||(32286323-32286382)
chr4 (118-173)||(51578007-51578062)
chr4 (109-167)||(3688579-3688637)
chr4 (116-181)||(16577330-16577395)
chr4 (54-113)||(2247576-2247636)
chr4 (109-169)||(2324765-2324825)
chr4 (54-105)||(7403174-7403226)
chr4 (102-150)||(17181284-17181332)
chr4 (46-112)||(31758677-31758742)
chr4 (57-104)||(33414002-33414050)
[»] chr7 (12 HSPs)
chr7 (65-150)||(29356943-29357029)
chr7 (109-149)||(40134458-40134498)
chr7 (107-150)||(24516582-24516625)
chr7 (46-107)||(3235547-3235609)
chr7 (46-96)||(22026090-22026140)
chr7 (109-167)||(47497772-47497830)
chr7 (106-167)||(7017155-7017216)
chr7 (106-167)||(7032513-7032574)
chr7 (102-147)||(11201322-11201367)
chr7 (115-167)||(640957-641009)
chr7 (57-104)||(2276276-2276324)
chr7 (102-142)||(45200484-45200524)
[»] chr8 (12 HSPs)
chr8 (109-169)||(40694685-40694745)
chr8 (46-96)||(40694601-40694651)
chr8 (109-155)||(40696209-40696255)
chr8 (46-106)||(40566546-40566607)
chr8 (46-112)||(17893305-17893372)
chr8 (58-104)||(34504377-34504424)
chr8 (127-182)||(43042228-43042283)
chr8 (109-151)||(26018532-26018574)
chr8 (109-143)||(40175966-40176000)
chr8 (61-201)||(40566479-40566620)
chr8 (46-105)||(20271104-20271164)
chr8 (46-105)||(21057732-21057792)
[»] chr2 (18 HSPs)
chr2 (113-169)||(45300443-45300499)
chr2 (46-112)||(12779490-12779556)
chr2 (58-112)||(25666798-25666853)
chr2 (46-111)||(12703460-12703526)
chr2 (109-150)||(4237322-4237363)
chr2 (109-150)||(44247564-44247605)
chr2 (49-104)||(1469730-1469786)
chr2 (115-167)||(12779511-12779562)
chr2 (46-104)||(42094294-42094353)
chr2 (109-167)||(1930679-1930737)
chr2 (54-96)||(15194531-15194573)
chr2 (63-112)||(18719736-18719786)
chr2 (109-167)||(18719740-18719798)
chr2 (46-88)||(25666907-25666949)
chr2 (109-169)||(2683448-2683508)
chr2 (94-150)||(3466444-3466500)
chr2 (46-105)||(9430228-9430288)
chr2 (114-150)||(37810223-37810259)
[»] scaffold0003 (1 HSPs)
scaffold0003 (49-96)||(136422-136469)
[»] chr5 (7 HSPs)
chr5 (109-159)||(3907726-3907776)
chr5 (115-197)||(33029473-33029555)
chr5 (49-112)||(25545211-25545273)
chr5 (46-150)||(35244866-35244971)
chr5 (67-111)||(42420102-42420147)
chr5 (102-150)||(38029566-38029614)
chr5 (54-112)||(41169474-41169533)
[»] chr1 (11 HSPs)
chr1 (54-96)||(2542698-2542740)
chr1 (116-193)||(21281460-21281538)
chr1 (46-103)||(38663639-38663697)
chr1 (44-96)||(31970106-31970158)
chr1 (57-104)||(49822620-49822668)
chr1 (46-104)||(34437689-34437748)
chr1 (109-159)||(2542774-2542824)
chr1 (115-169)||(40669007-40669061)
chr1 (55-96)||(31851960-31852001)
chr1 (109-150)||(34437624-34437665)
chr1 (113-169)||(34437673-34437729)
[»] scaffold0015 (1 HSPs)
scaffold0015 (115-181)||(200953-201019)
[»] scaffold0137 (1 HSPs)
scaffold0137 (109-169)||(8252-8312)


Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 26986468 - 26986142
Alignment:
Q  1 taaaattcaagattattataatatcaggagatcagaaataccgagaacacactttttaacatacatttttcaacacactctatttgattggttaaattca 100  Q
    ||||||||||| ||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||    
T  26986468 taaaattcaaggttattattatatcaggagatgagaaataccaggaacacactttttaatatacatttttcaacacactctctttgattaattaaattca 26986369  T
Q  101 catgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacattctt 200  Q
    ||||||| ||| |||||||| | | |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| | |||||||||||||||    
T  26986368 catgagacccatataatttgataggacccatgtgaattttaactaatcaaggagaatgtgttgaaaagtatatgttaaaatatgtgttgctaacattctt 26986269  T
Q  201 cgttaggagatagcatatcatatcatggcatgattcatatggaaagcacaagatcaggcaaggatccttgaaccctagcccaaggagtactcctccaaag 300  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26986268 cgctaggagatagcatatcatatcatggcatgattcatatggaaagcacaagatcaggcaaggatccttgaaccctagcccaaggagtactcctccaaag 26986169  T
Q  301 cctaccctcatttccatcctcagaaac 327  Q
    |||||||||||||||||||||||||||    
T  26986168 cctaccctcatttccatcctcagaaac 26986142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 1458539 - 1458620
Alignment:
Q  57 taacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccacataatttggtggaacccatgtgaattt 139  Q
    ||||| ||| |||||||||||||||  |||||||||| ||||||| |||||| |||||| |||||||||||||||||| |||||    
T  1458539 taacacacaattttcaacacactct--ttgattggttgaaattcatatgagacccacatgatttggtggaacccatgtaaattt 1458620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 37341307 - 37341241
Alignment:
Q  92 ttaaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgt 159  Q
    ||||||| | |||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  37341307 ttaaatttatatgagacccacatgatttggtgga-cccatgtgaattttaactaatcaaaaagaatgt 37341241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 29955116 - 29955170
Alignment:
Q  115 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    |||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  29955116 aatttgatggatcccatatgaattttaactaatcaagaagagtgtattgaaaagt 29955170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 30004270 - 30004324
Alignment:
Q  115 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    |||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  30004270 aatttgatggatcccatatgaattttaactaatcaagaagagtgtattgaaaagt 30004324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 11532491 - 11532548
Alignment:
Q  93 taaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    |||||| | ||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  11532491 taaatttatatgggatccacatgatttggtggaacccatgtgaattttaaccaatcaa 11532548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 29955105 - 29955032
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaata 182  Q
    |||||| ||||| ||| |||||||||||||||||| |||||| || | ||| ||||||||||| ||||||||||    
T  29955105 ccacatgatttgatgggacccatgtgaattttaaccaatcaaaaaaagtgtgttgaaaagtatgtattaaaata 29955032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 30004259 - 30004186
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaata 182  Q
    |||||| ||||| ||| |||||||||||||||||| |||||| || | ||| ||||||||||| ||||||||||    
T  30004259 ccacatgatttgatgggacccatgtgaattttaaccaatcaaaaaaagtgtgttgaaaagtatgtattaaaata 30004186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 44890476 - 44890438
Alignment:
Q  58 aacatacatttttcaacacactctatttgattggttaaa 96  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  44890476 aacatacatttttcaacacactctttttgattggttaaa 44890438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 169
Target Start/End: Original strand, 799260 - 799373
Alignment:
Q  58 aacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccacataattt-ggtggaacccatgtgaattttaactaatcaagaaga 155  Q
    |||| |||||||||||||| |||| ||| ||||||| ||||||||||| |  ||| |||| || ||||| ||| |||| ||||||||| ||||||  |||    
T  799260 aacacacatttttcaacacgctctctttaattggtttaaattcacatgggtcccatataaattaggtgggacctatgtcaattttaaccaatcaaagaga 799359  T
Q  156 atgtattgaaaagt 169  Q
    | ||||||||||||    
T  799360 aagtattgaaaagt 799373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 3901565 - 3901508
Alignment:
Q  110 cacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    ||||| ||||||||| |||||||||||||||||| ||||||  ||||||| |||||||    
T  3901565 cacatgatttggtgggacccatgtgaattttaaccaatcaaagagaatgtgttgaaaa 3901508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 37189295 - 37189235
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 105  Q
    ||||||| |||||| |||||||||| |||| ||||| ||||||||||| ||||||||||||    
T  37189295 aacacacattttaatatacattttttaacagactctctttgattggttaaaattcacatga 37189235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 3901566 - 3901625
Alignment:
Q  110 cacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    ||||| ||||||||| |||||||||||||||||| ||||||  ||| ||| |||||||||    
T  3901566 cacatgatttggtgggacccatgtgaattttaaccaatcaaagagagtgtgttgaaaagt 3901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 3901635 - 3901585
Alignment:
Q  55 tttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||||| ||| ||||||||||||||| ||||||||||| |||||||||||    
T  3901635 tttaacacacacttttcaacacactctctttgattggttaaaattcacatg 3901585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 19560768 - 19560730
Alignment:
Q  58 aacatacatttttcaacacactctatttgattggttaaa 96  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  19560768 aacacacatttttcaacacactctctttgattggttaaa 19560730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 31205357 - 31205407
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    ||||||| |||||||| | ||||| ||||||||||| ||||||||||||||    
T  31205357 aacacacgttttaacacatattttccaacacactctctttgattggttaaa 31205407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 35357305 - 35357355
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    ||||||| || ||||| | ||||||||||||||||| ||||||||||||||    
T  35357305 aacacacattctaacaaatatttttcaacacactctctttgattggttaaa 35357355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 32880983 - 32881044
Alignment:
Q  44 agaacacactttttaacatacatttttcaacacactctatttgattggttaa-attcacatg 104  Q
    ||||||||| ||||| || ||||||||||||| |||||  |||||||||||| |||||||||    
T  32880983 agaacacacattttatcacacatttttcaacatactctccttgattggttaatattcacatg 32881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 55196241 - 55196334
Alignment:
Q  65 atttttcaacacactctatttgattggtt-aaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaat 157  Q
    ||||||||||||| ||| ||| |||| || ||||||| ||||||| ||||||||||  ||||| | || |||||||||| |||| || ||||||    
T  55196241 atttttcaacacattctttttaattgattaaaattcatatgagattcacataatttaatggaatctatatgaattttaattaataaaaaagaat 55196334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 1753383 - 1753295
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacatt 197  Q
    |||||| ||||| || ||| ||||| ||||||||| |||||| |||| | ||||||||||| ||| ||||| || |  |||||||||||    
T  1753383 ccacatgatttgatgaaactcatgtaaattttaaccaatcaaaaagagtatattgaaaagtgtatgttaaagtacgtattgctaacatt 1753295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 201
Target Start/End: Complemental strand, 1473735 - 1473590
Alignment:
Q  58 aacatacatttttcaacacactctatttgattggttaaa--ttcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaagaaga 155  Q
    |||| ||| ||||||||| ||||| |||||||| |||||  |||||||| || |||||| |||||||||||||||||||||||||||| ||||||  | |    
T  1473735 aacacacacttttcaacatactctctttgattgtttaaaaattcacatgggacccacatgatttggtggaacccatgtgaattttaaccaatcaaagata 1473636  T
Q  156 atgtattgaaaagtatatattaaaataagggttgctaacattcttc 201  Q
     ||| ||||||| | | |||||||||  | ||||||| ||||||||    
T  1473635 gtgtgttgaaaaatgtgtattaaaatgtgtgttgctagcattcttc 1473590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 28865520 - 28865443
Alignment:
Q  67 ttttcaacacactctatttgattggttaaat-tcacatgagatccacataatttggtggaacccatgtgaattttaac 143  Q
    |||||||||| |||| ||||||||||||||  ||||||| || |||||| | ||||||| ||||||||||||||||||    
T  28865520 ttttcaacacgctctctttgattggttaaaactcacatgggacccacatgaattggtgggacccatgtgaattttaac 28865443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 24110066 - 24110118
Alignment:
Q  61 atacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||    
T  24110066 atacatttttcaacacactctctttgattggttaaaattcatatgtgatccac 24110118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 1473603 - 1473662
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||||| |||||| | ||||||||||||||||| | ||||||||||| |||||||||||    
T  1473603 aacacacattttaatacacatttttcaacacactatctttgattggttaaaattcacatg 1473662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 4787868 - 4787818
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    ||||||| ||||||||||||||||| ||||  |||| ||||||||||||||    
T  4787868 aacacacattttaacatacattttttaacagtctctctttgattggttaaa 4787818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 17600756 - 17600706
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    ||||||| |||||||| ||||||||||||| | ||| ||||||||||||||    
T  17600756 aacacacattttaacaaacatttttcaacatattctctttgattggttaaa 17600706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 3150278 - 3150242
Alignment:
Q  107 atccacataatttggtggaacccatgtgaattttaac 143  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  3150278 atccacatgatttggtgggacccatgtgaattttaac 3150242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 11650956 - 11650916
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatca 149  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  11650956 ccacataatttggtgggatccatgtgaattttaaccaatca 11650916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 12731601 - 12731533
Alignment:
Q  129 catgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacatt 197  Q
    ||||||||||||||| ||||||  ||||||| |||| |||| | ||||| |||| | ||||||||||||    
T  12731601 catgtgaattttaaccaatcaaagagaatgtgttgagaagtgtgtattagaatatgtgttgctaacatt 12731533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 34119639 - 34119726
Alignment:
Q  57 taacatacatttttcaacacactctatttgattggttaaa-ttcacatgagatccacataatttggtggaacccatgtgaattttaac 143  Q
    ||||| ||||||||||||||||||  |||||| ||||||| |||||||||||||||||| |||| || | ||||||||||||||||||    
T  34119639 taacacacatttttcaacacactcgttttgatcggttaaaattcacatgagatccacatgatttagtaggacccatgtgaattttaac 34119726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 21433861 - 21433928
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  21433861 aacacacattttaacacacatttttcaacacactctctttgattggttaaaattcacatgagacccac 21433928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 993348 - 993243
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtta-aattcacatgagatccacataatttggtggaacccatgtgaattttaact 144  Q
    ||||||| | |||||| ||| ||| ||||| ||||| ||||||| |||| |||||||||| || |||||| ||||||||| || |||||||||||||||     
T  993348 aacacacatcttaacacacactttccaacaaactctctttgatttgttagaattcacatgggacccacatgatttggtgggactcatgtgaattttaacc 993249  T
Q  145 aatcaa 150  Q
    ||||||    
T  993248 aatcaa 993243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 21433938 - 21434034
Alignment:
Q  102 atgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacattc 198  Q
    |||||| |||||| ||||||||| | |||||||||||||||| ||||||  ||| ||| ||||||||| ||| |||||||  | ||||||| |||||    
T  21433938 atgagacccacatgatttggtgggatccatgtgaattttaaccaatcaatgagagtgtgttgaaaagtgtatgttaaaatgtgtgttgctaccattc 21434034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 21434024 - 21433965
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||||| |||||||||||| |||||||||||||||  |||||||||| |||||||||||    
T  21434024 aacacacattttaacatacacttttcaacacactctcattgattggttaaaattcacatg 21433965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 31758769 - 31758694
Alignment:
Q  94 aaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    ||||| |||||||| |||||| |||||||||| |  |||||||||||||| ||||||  ||||||| |||||||||    
T  31758769 aaatttacatgagacccacatgatttggtggagcttatgtgaattttaaccaatcaaatagaatgtgttgaaaagt 31758694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 41840720 - 41840676
Alignment:
Q  69 ttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  41840720 ttcaacacactctatttgattggttaaaattcacatgagttccac 41840676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 32286382 - 32286323
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||||| ||| |||||| ||||||||||||||||| ||| ||||||| |||||||||||    
T  32286382 aacacacgtttcaacatatatttttcaacacactcttttttattggttaaaattcacatg 32286323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 51578062 - 51578007
Alignment:
Q  118 ttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatat 173  Q
    ||||||| |||||||||||||||||| |||||| | |||||| |||| ||||||||    
T  51578062 ttggtgggacccatgtgaattttaacaaatcaaaatgaatgtgttgataagtatat 51578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 3688637 - 3688579
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    |||||| ||||||||  |||||||||||||||||||||||||  | ||||| |||||||    
T  3688637 ccacatgatttggtgagacccatgtgaattttaactaatcaaagaaaatgtgttgaaaa 3688579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 16577330 - 16577395
Alignment:
Q  116 atttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaat 181  Q
    ||||| |||||||||||||| ||||||| ||||||  ||||| |||| |||||| ||| |||||||    
T  16577330 atttgttggaacccatgtgagttttaaccaatcaaatagaatatattaaaaagtgtatgttaaaat 16577395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 2247576 - 2247636
Alignment:
Q  54 ttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccaca 113  Q
    |||||||| ||| ||||||||||||||| ||| |||| || ||||||||| ||||||||||    
T  2247576 ttttaacacacacttttcaacacactctctttaattgattaaaattcacacgagatccaca 2247636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 2324825 - 2324765
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    |||||| |||||||| ||| ||||||||||||||| ||||||  ||| | |||||||||||    
T  2324825 ccacatgatttggtgaaactcatgtgaattttaaccaatcaaagagagtatattgaaaagt 2324765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 7403226 - 7403174
Alignment:
Q  54 ttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 105  Q
    |||||||| ||| | ||||||||||||| ||||||||||| ||||||||||||    
T  7403226 ttttaacacacactattcaacacactctctttgattggttaaaattcacatga 7403174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 17181284 - 17181332
Alignment:
Q  102 atgagatccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    |||||| |||| | ||||||||| ||| |||||||||||||||||||||    
T  17181284 atgagacccacgtgatttggtgggacctatgtgaattttaactaatcaa 17181332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 31758677 - 31758742
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    ||||||| |||||||| ||  ||||||||||| ||||||||||||||| |||||||||| || |||||    
T  31758677 aacacacattttaacacac--ttttcaacacattctatttgattggttaaaattcacataagctccac 31758742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 33414002 - 33414050
Alignment:
Q  57 taacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||| ||| ||||||||||||||| ||||||||||| |||||||||||    
T  33414002 taacacacacttttcaacacactctctttgattggttaaaattcacatg 33414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 29357029 - 29356943
Alignment:
Q  65 atttttcaacacactctatttgattggttaaa-ttcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    ||||||||||||||||  ||||||| |||||| |||| ||| ||||||| | | |||||||||||||||||||||||||| ||||||    
T  29357029 atttttcaacacactcggtttgatttgttaaaattcatatgggatccacgtgaattggtggaacccatgtgaattttaaccaatcaa 29356943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 40134458 - 40134498
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatca 149  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  40134458 ccacataatttggtgggacccatgtgaattttaaccaatca 40134498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 24516625 - 24516582
Alignment:
Q  107 atccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||    
T  24516625 atccacatgatttggtgggacccatgtgaattttaaccaatcaa 24516582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 3235547 - 3235609
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgaga 107  Q
    ||||||| |||||||| ||| ||| ||| ||||||| ||||||||||| ||||||||||||||    
T  3235547 aacacacattttaacacacactttccaatacactctctttgattggttaaaattcacatgaga 3235609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 22026140 - 22026090
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    ||||||| |||||||| |||||||||||||  ||||||||||| |||||||    
T  22026140 aacacacgttttaacacacatttttcaacatgctctatttgataggttaaa 22026090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 47497772 - 47497830
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    |||||||||||||||| || ||||||||||||||| ||||||  | ||| |||||||||    
T  47497772 ccacataatttggtgggactcatgtgaattttaaccaatcaaagaaaatatattgaaaa 47497830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 7017155 - 7017216
Alignment:
Q  106 gatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    ||||||||||||||||| | ||  |||||||||||||| ||||||  ||| |||||||||||    
T  7017155 gatccacataatttggtaggacttatgtgaattttaaccaatcaaagagagtgtattgaaaa 7017216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 7032513 - 7032574
Alignment:
Q  106 gatccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    ||||||||||||||||| | ||  |||||||||||||| ||||||  ||| |||||||||||    
T  7032513 gatccacataatttggtaggacttatgtgaattttaaccaatcaaagagagtgtattgaaaa 7032574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 11201367 - 11201322
Alignment:
Q  102 atgagatccacataatttggtggaacccatgtgaattttaactaat 147  Q
    |||||| |||| | ||||||||| ||||||||||||||||||||||    
T  11201367 atgagacccacgtgatttggtgggacccatgtgaattttaactaat 11201322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 640957 - 641009
Alignment:
Q  115 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    |||||||| || | ||||||||||||||| |||||| ||||||||||| ||||    
T  640957 aatttggtagatctcatgtgaattttaacgaatcaaaaagaatgtattaaaaa 641009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 2276276 - 2276324
Alignment:
Q  57 taacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||| ||| ||||||||||||||| ||||||||||| |||||||||||    
T  2276276 taacacacacttttcaacacactctctttgattggttaaaattcacatg 2276324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 45200524 - 45200484
Alignment:
Q  102 atgagatccacataatttggtggaacccatgtgaattttaa 142  Q
    ||||||||||||| |||||||||||||||| | ||||||||    
T  45200524 atgagatccacatgatttggtggaacccatataaattttaa 45200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 40694685 - 40694745
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    |||||| ||||||||| |||||||||||||||||||||| || |||| |||||||||||||    
T  40694685 ccacatgatttggtgggacccatgtgaattttaactaataaaaaagagtgtattgaaaagt 40694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 40694601 - 40694651
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    ||||||| |||||||| ||||||| ||||||| ||||||||||||||||||    
T  40694601 aacacacgttttaacacacattttacaacacaatctatttgattggttaaa 40694651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 40696255 - 40696209
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaaga 155  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  40696255 ccacatgatttggtgggacccatgtgaattttaactaatcaaaaaga 40696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 40566607 - 40566546
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgag 106  Q
    ||||||| |||||||| | |||||||||||| |||| ||||||||||| |||||||||||||    
T  40566607 aacacacattttaacacatatttttcaacacgctctttttgattggttaaaattcacatgag 40566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 17893305 - 17893372
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    ||||||| ||||||||||||||||| |||| ||||| ||||||| ||| ||| ||||||||| |||||    
T  17893305 aacacacattttaacatacattttttaacagactctctttgattagttaaaactcacatgagttccac 17893372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 34504377 - 34504424
Alignment:
Q  58 aacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  34504377 aacatatatttttcaacacactctttttgattggttaaaattcacatg 34504424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 43042228 - 43042283
Alignment:
Q  127 cccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaata 182  Q
    ||||| ||||||||||| |||||| |||| ||||||||||||||||  ||||||||    
T  43042228 cccatatgaattttaaccaatcaaaaagagtgtattgaaaagtatacgttaaaata 43042283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 26018532 - 26018574
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaag 151  Q
    |||||||||||| ||| |||||||||||||||||| |||||||    
T  26018532 ccacataatttgatgggacccatgtgaattttaaccaatcaag 26018574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 40175966 - 40176000
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaac 143  Q
    |||||||||||||||| ||||||||||||||||||    
T  40175966 ccacataatttggtgggacccatgtgaattttaac 40176000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 201
Target Start/End: Original strand, 40566479 - 40566620
Alignment:
Q  61 atacatttttcaacacactctatttgattggttaaa-ttcacatgagatccac-ataatttggtggaacccatgtgaattttaactaatcaagaagaatg 158  Q
    ||||||||||||||||| | | ||| ||| |||||| || ||||| ||||| | || ||||||||  || ||||||||||||||| |||||| ||||  |    
T  40566479 atacatttttcaacacatttttttttattcgttaaaatttacatg-gatcctccatgatttggtgagactcatgtgaattttaaccaatcaaaaagagcg 40566577  T
Q  159 tattgaaaagtatatattaaaataagggttgctaacattcttc 201  Q
    | ||||||| ||| | |||||||  | ||||||||||||||||    
T  40566578 tgttgaaaaatatgtgttaaaatgtgtgttgctaacattcttc 40566620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 20271164 - 20271104
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 105  Q
    ||||||| ||||||||  || ||||||||||||||| ||||||| ||| ||||||||||||    
T  20271164 aacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatga 20271104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 21057792 - 21057732
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 105  Q
    ||||||| ||||||||  || ||||||||||||||| ||||||| ||| ||||||||||||    
T  21057792 aacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatga 21057732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 45300443 - 45300499
Alignment:
Q  113 ataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    |||||||| ||||| |||||||||||||||| |||||| |||| |||||||||||||    
T  45300443 ataatttgatggaatccatgtgaattttaaccaatcaaaaagagtgtattgaaaagt 45300499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 12779490 - 12779556
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    ||||||| || ||||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||    
T  12779490 aacacaccttctaacatacatttttcaacacattct-tttgattggttaaaattcacatgggatccac 12779556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 25666798 - 25666853
Alignment:
Q  58 aacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    |||| |||||||||||||||||||||||||||| || |||||||||||||| ||||    
T  25666798 aacacacatttttcaacacactctatttgattgattaaaattcacatgagacccac 25666853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 12703460 - 12703526
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggttaa-attcacatgagatcca 111  Q
    ||||||| |||||||| ||||||||||| ||||| | ||||||||||||| ||||||||||| ||||    
T  12703460 aacacacattttaacacacatttttcaatacactttctttgattggttaatattcacatgagttcca 12703526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 4237322 - 4237363
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  4237322 ccacatgatttggtggtacccatgtgaattttaactaatcaa 4237363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 44247605 - 44247564
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  44247605 ccacataatttggtggaacccatgtgaatttcaaccaatcaa 44247564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 1469730 - 1469786
Alignment:
Q  49 acactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||| |||||||||||    
T  1469730 acacattttaacacatatttttcaacacactctatttaattggttaaaattcacatg 1469786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 12779562 - 12779511
Alignment:
Q  115 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||| |||||||    
T  12779562 aatttggtggatcccatgtgaattttaaccaatcaa-aagaatgtgttgaaaa 12779511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 42094353 - 42094294
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||||| |||||||| ||| |||||||||||| || ||||||||||| |||||||||||    
T  42094353 aacacacattttaacacacacttttcaacacacactctttgattggttaaaattcacatg 42094294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 1930737 - 1930679
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    |||||||||||| ||||||  |||||||||||||| |||||| |||| ||| |||||||    
T  1930737 ccacataatttgatggaacatatgtgaattttaaccaatcaaaaagagtgtcttgaaaa 1930679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 15194531 - 15194573
Alignment:
Q  54 ttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    |||||||||||| |||||| |||||||| ||||||||||||||    
T  15194531 ttttaacatacacttttcagcacactctttttgattggttaaa 15194573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 18719736 - 18719786
Alignment:
Q  63 acatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||| |||||    
T  18719736 acatttttcaacacactctttttgattggttaaaattcacacgagttccac 18719786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 18719798 - 18719740
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaa 167  Q
    |||||| |||||||||||| | ||||||||||||| |||||| |||| ||| |||||||    
T  18719798 ccacatgatttggtggaactcgtgtgaattttaaccaatcaaaaagagtgtgttgaaaa 18719740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 25666949 - 25666907
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgat 88  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||    
T  25666949 aacacacattttaacatacaattttcaacacactctctttgat 25666907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 2683448 - 2683508
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    |||||| |||||||||||||||| | ||||||||| |||||| |||| |||  ||||||||    
T  2683448 ccacatgatttggtggaacccatataaattttaaccaatcaaaaagagtgtcgtgaaaagt 2683508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 3466444 - 3466500
Alignment:
Q  94 aaattcacatgagatccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    ||||||| ||| || |||||  |||| ||||||||||||||||||||||| ||||||    
T  3466444 aaattcatatgggacccacacgatttagtggaacccatgtgaattttaaccaatcaa 3466500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 9430288 - 9430228
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatga 105  Q
    ||||||| || ||||| ||| ||||||||| | ||||||||||||||| ||||||||||||    
T  9430288 aacacacattctaacacacacttttcaacatattctatttgattggttaaaattcacatga 9430228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 37810223 - 37810259
Alignment:
Q  114 taatttggtggaacccatgtgaattttaactaatcaa 150  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  37810223 taatttggtgggacccatgtgaattttaaccaatcaa 37810259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 136469 - 136422
Alignment:
Q  49 acactttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  136469 acacattttaacacacatttttcaacacactctttttgattggttaaa 136422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 3907726 - 3907776
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgt 159  Q
    |||||| ||||||||| |||||||||||||||||| |||||| ||||||||    
T  3907726 ccacatgatttggtgggacccatgtgaattttaaccaatcaaaaagaatgt 3907776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 33029555 - 33029473
Alignment:
Q  115 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaataagggttgctaacatt 197  Q
    |||||||||| ||  || ||||||||||||||| ||  ||||||| ||||||||||||| |||||||| | ||||||| ||||    
T  33029555 aatttggtgggacttatatgaattttaactaattaaagagaatgtgttgaaaagtatatgttaaaatatgtgttgctagcatt 33029473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 25545211 - 25545273
Alignment:
Q  49 acactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    |||| |||||||| ||||||||||||||||||  ||||||||||| |||||||||||||| ||||    
T  25545211 acacattttaacacacatttttcaacacactc--tttgattggttaaaattcacatgagacccac 25545273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 35244971 - 35244866
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccacataatttggtggaacccatgtgaattttaact 144  Q
    ||||||| |||||||||||| || |||||||||| | ||||||||||| ||||||| | | |   ||||| || |||||| | ||||||||||||||||     
T  35244971 aacacacattttaacatacacttgtcaacacactttctttgattggttgaaattcataggggtcacacatgatatggtgggatccatgtgaattttaacc 35244872  T
Q  145 aatcaa 150  Q
    ||||||    
T  35244871 aatcaa 35244866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 42420147 - 42420102
Alignment:
Q  67 ttttcaacacactctatttgattggtt-aaattcacatgagatcca 111  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  42420147 ttttcaacacactctatttgattggttaaaactcacatgagatcca 42420102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 38029614 - 38029566
Alignment:
Q  102 atgagatccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    ||||||||||||| ||||||||  |||||||||||||||||| ||||||    
T  38029614 atgagatccacatgatttggtgagacccatgtgaattttaaccaatcaa 38029566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 41169533 - 41169474
Alignment:
Q  54 ttttaacatacatttttcaacacactctatttgattggtt-aaattcacatgagatccac 112  Q
    |||||||| ||||||||||||||||||| ||||||  ||| ||||||||||| |||||||    
T  41169533 ttttaacacacatttttcaacacactctctttgatccgttaaaattcacatgtgatccac 41169474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 2542698 - 2542740
Alignment:
Q  54 ttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  2542698 ttttaacacacatttttcaacacactctctttgattggttaaa 2542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 21281538 - 21281460
Alignment:
Q  116 atttggtggaacccatgtgaattttaactaatc-aagaagaatgtattgaaaagtatatattaaaataagggttgctaa 193  Q
    ||||||||| ||| |||||||||||||| |||| || |||||||| ||||||||| ||| |||||||| | ||||||||    
T  21281538 atttggtgggacctatgtgaattttaaccaatcaaaaaagaatgtgttgaaaagtgtatgttaaaatatgtgttgctaa 21281460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 38663639 - 38663697
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtta-aattcacat 103  Q
    ||||||| |||||||| | ||||||||||||||||| |||||||||||| |||||||||    
T  38663639 aacacacattttaacacatatttttcaacacactctctttgattggttacaattcacat 38663697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 31970106 - 31970158
Alignment:
Q  44 agaacacactttttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    ||||||||  || ||||| ||||||||||||||||||| ||||||||||||||    
T  31970106 agaacacaagttctaacacacatttttcaacacactctttttgattggttaaa 31970158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 49822668 - 49822620
Alignment:
Q  57 taacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  49822668 taacacacatttttcaacacactctctttgattggttaaaattcacatg 49822620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 34437748 - 34437689
Alignment:
Q  46 aacacactttttaacatacatttttcaacacactctatttgattggtt-aaattcacatg 104  Q
    ||||||| ||||||||  || ||||||||||||||| ||||||||||| |||||||||||    
T  34437748 aacacacattttaacacgcacttttcaacacactctctttgattggttaaaattcacatg 34437689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 2542774 - 2542824
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgt 159  Q
    |||||| ||||||||||| |||||||||||||||| ||||||  |||||||    
T  2542774 ccacatgatttggtggaagccatgtgaattttaaccaatcaaagagaatgt 2542824  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 40669007 - 40669061
Alignment:
Q  115 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    ||||||||||||||| ||||||||||||| ||||||  ||| ||| |||||||||    
T  40669007 aatttggtggaacccgtgtgaattttaaccaatcaaagagagtgtgttgaaaagt 40669061  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 31852001 - 31851960
Alignment:
Q  55 tttaacatacatttttcaacacactctatttgattggttaaa 96  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||    
T  31852001 tttaatatacatttttcaacacactctctttgatttgttaaa 31851960  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 34437665 - 34437624
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaa 150  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  34437665 ccacatgatttggtgggacccatgtgaattttaaccaatcaa 34437624  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 34437673 - 34437729
Alignment:
Q  113 ataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    ||||||||| || |||||||||||||||||| ||||||  ||| ||| |||||||||    
T  34437673 ataatttggggggacccatgtgaattttaaccaatcaaagagagtgtgttgaaaagt 34437729  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 201019 - 200953
Alignment:
Q  115 aatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagtatatattaaaat 181  Q
    ||||||||||  || |||||||||||||| ||| ||||||||||| ||||||| ||| | |||||||    
T  201019 aatttggtgggtccaatgtgaattttaaccaattaagaagaatgtgttgaaaaatatgtgttaaaat 200953  T

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Target: scaffold0137 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 8252 - 8312
Alignment:
Q  109 ccacataatttggtggaacccatgtgaattttaactaatcaagaagaatgtattgaaaagt 169  Q
    |||||||||||||||| |  ||||||||||||| | |||||| |||||||  |||||||||    
T  8252 ccacataatttggtgggattcatgtgaattttagccaatcaaaaagaatgcgttgaaaagt 8312  T

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