View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2028_low_14 (Length: 341)

Name: NF2028_low_14
Description: NF2028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2028_low_14
NF2028_low_14
[»] chr6 (17 HSPs)
chr6 (107-324)||(31109508-31109708)
chr6 (19-99)||(31109245-31109325)
chr6 (13-99)||(9698350-9698436)
chr6 (13-99)||(21279926-21280012)
chr6 (13-96)||(13743238-13743321)
chr6 (13-96)||(13748738-13748821)
chr6 (13-96)||(30014343-30014426)
chr6 (13-99)||(21293694-21293780)
chr6 (13-97)||(3213399-3213483)
chr6 (13-96)||(33253913-33253996)
chr6 (13-94)||(27441544-27441625)
chr6 (13-97)||(7292746-7292830)
chr6 (13-97)||(7367548-7367632)
chr6 (13-97)||(26670026-26670110)
chr6 (13-97)||(33242402-33242486)
chr6 (13-97)||(7273352-7273436)
chr6 (13-97)||(26466798-26466882)
[»] chr4 (26 HSPs)
chr4 (13-96)||(55272393-55272476)
chr4 (14-97)||(28988472-28988555)
chr4 (13-98)||(32728355-32728440)
chr4 (13-97)||(711959-712043)
chr4 (13-96)||(17619169-17619252)
chr4 (16-97)||(960890-960971)
chr4 (13-94)||(35037007-35037088)
chr4 (13-97)||(1771283-1771367)
chr4 (13-97)||(27864563-27864647)
chr4 (13-97)||(55966363-55966447)
chr4 (13-94)||(3756263-3756344)
chr4 (13-94)||(27893859-27893940)
chr4 (13-94)||(38851515-38851596)
chr4 (13-98)||(48463467-48463552)
chr4 (42-97)||(46827752-46827807)
chr4 (13-95)||(41878407-41878489)
chr4 (13-99)||(48435596-48435682)
chr4 (16-98)||(49229684-49229766)
chr4 (13-94)||(43735744-43735825)
chr4 (16-96)||(27550309-27550389)
chr4 (13-97)||(33703140-33703224)
chr4 (13-96)||(35017733-35017815)
chr4 (13-94)||(31680904-31680985)
chr4 (13-94)||(43514703-43514784)
chr4 (16-96)||(12496956-12497036)
chr4 (13-97)||(25051692-25051776)
[»] chr5 (12 HSPs)
chr5 (13-97)||(7617132-7617216)
chr5 (13-97)||(38470578-38470662)
chr5 (13-99)||(17208071-17208157)
chr5 (13-96)||(2614666-2614749)
chr5 (13-96)||(22512305-22512388)
chr5 (13-96)||(32473411-32473494)
chr5 (13-96)||(41334680-41334763)
chr5 (13-94)||(5256997-5257078)
chr5 (13-97)||(18033981-18034065)
chr5 (13-97)||(30622736-30622819)
chr5 (13-97)||(33801468-33801552)
chr5 (44-96)||(33855091-33855143)
[»] chr1 (21 HSPs)
chr1 (13-98)||(45705823-45705908)
chr1 (13-96)||(48119628-48119711)
chr1 (13-97)||(44112676-44112760)
chr1 (13-97)||(45639749-45639833)
chr1 (13-96)||(35003294-35003377)
chr1 (13-96)||(46168383-46168466)
chr1 (14-99)||(750323-750408)
chr1 (13-97)||(5489775-5489859)
chr1 (13-96)||(38335918-38336001)
chr1 (15-97)||(26585461-26585543)
chr1 (13-98)||(38113212-38113297)
chr1 (13-98)||(41065151-41065236)
chr1 (13-96)||(37814778-37814861)
chr1 (13-96)||(43571103-43571186)
chr1 (13-99)||(45427762-45427848)
chr1 (13-94)||(2497579-2497660)
chr1 (13-94)||(7447828-7447908)
chr1 (13-97)||(48498979-48499063)
chr1 (42-97)||(14427346-14427401)
chr1 (13-96)||(35000130-35000213)
chr1 (13-97)||(23989540-23989625)
[»] chr8 (18 HSPs)
chr8 (13-97)||(34304787-34304871)
chr8 (13-98)||(18066735-18066820)
chr8 (13-97)||(35181515-35181599)
chr8 (13-94)||(26125637-26125718)
chr8 (13-97)||(36743500-36743584)
chr8 (13-96)||(11582766-11582849)
chr8 (13-96)||(29705362-29705445)
chr8 (13-99)||(16603643-16603729)
chr8 (13-99)||(29800967-29801053)
chr8 (13-99)||(20148757-20148843)
chr8 (13-99)||(31384661-31384747)
chr8 (16-97)||(30660762-30660843)
chr8 (13-97)||(5754902-5754986)
chr8 (13-95)||(16358850-16358933)
chr8 (13-99)||(2546993-2547079)
chr8 (63-97)||(19386637-19386671)
chr8 (13-94)||(33630010-33630091)
chr8 (13-94)||(42295197-42295278)
[»] chr7 (22 HSPs)
chr7 (13-97)||(40236918-40237002)
chr7 (13-95)||(31408650-31408732)
chr7 (13-96)||(24001029-24001112)
chr7 (13-96)||(31513287-31513370)
chr7 (13-96)||(42538448-42538531)
chr7 (13-96)||(42972852-42972935)
chr7 (13-99)||(24280613-24280699)
chr7 (13-99)||(43317440-43317526)
chr7 (13-94)||(10573751-10573832)
chr7 (13-97)||(33384869-33384954)
chr7 (13-99)||(44326175-44326261)
chr7 (13-98)||(5194248-5194333)
chr7 (44-97)||(27535279-27535332)
chr7 (13-94)||(43343641-43343722)
chr7 (13-94)||(44416951-44417032)
chr7 (13-97)||(5015394-5015478)
chr7 (13-96)||(5810941-5811024)
chr7 (29-96)||(39998408-39998475)
chr7 (13-99)||(9216299-9216384)
chr7 (13-94)||(4638216-4638297)
chr7 (13-98)||(35069719-35069804)
chr7 (48-97)||(41861673-41861722)
[»] chr3 (19 HSPs)
chr3 (13-97)||(9434123-9434207)
chr3 (13-96)||(36150130-36150213)
chr3 (13-96)||(45126945-45127028)
chr3 (13-95)||(42394436-42394518)
chr3 (13-97)||(10457909-10457993)
chr3 (13-97)||(46941052-46941136)
chr3 (13-97)||(52627994-52628078)
chr3 (13-99)||(53581875-53581961)
chr3 (13-95)||(54237097-54237179)
chr3 (13-98)||(25996266-25996351)
chr3 (13-97)||(4190282-4190366)
chr3 (13-97)||(24688419-24688503)
chr3 (13-96)||(42100688-42100771)
chr3 (13-97)||(40808864-40808948)
chr3 (13-96)||(34791829-34791912)
chr3 (13-99)||(25413678-25413764)
chr3 (13-94)||(27748565-27748646)
chr3 (13-97)||(47191043-47191126)
chr3 (13-97)||(54246165-54246249)
[»] chr2 (23 HSPs)
chr2 (13-94)||(41281991-41282072)
chr2 (13-97)||(16803967-16804051)
chr2 (13-97)||(16843249-16843333)
chr2 (13-97)||(43114556-43114640)
chr2 (13-99)||(8896600-8896686)
chr2 (13-95)||(19047158-19047240)
chr2 (13-94)||(6518486-6518566)
chr2 (13-94)||(11825671-11825752)
chr2 (13-99)||(18491702-18491788)
chr2 (13-99)||(42026764-42026852)
chr2 (13-97)||(966851-966935)
chr2 (28-96)||(16096747-16096815)
chr2 (13-96)||(12415477-12415560)
chr2 (13-96)||(12427537-12427620)
chr2 (13-95)||(34817793-34817875)
chr2 (13-98)||(30838630-30838715)
chr2 (14-99)||(43490419-43490504)
chr2 (13-97)||(34895758-34895842)
chr2 (13-96)||(1750414-1750497)
chr2 (13-96)||(13780752-13780835)
chr2 (13-94)||(4299437-4299518)
chr2 (13-97)||(12302270-12302354)
chr2 (13-97)||(43335780-43335864)
[»] scaffold0038 (1 HSPs)
scaffold0038 (13-95)||(112656-112738)
[»] scaffold0003 (1 HSPs)
scaffold0003 (13-94)||(45736-45817)
[»] scaffold0385 (1 HSPs)
scaffold0385 (13-97)||(11250-11334)
[»] scaffold0119 (1 HSPs)
scaffold0119 (13-97)||(684-768)
[»] scaffold0100 (1 HSPs)
scaffold0100 (13-96)||(35473-35556)
[»] scaffold0157 (1 HSPs)
scaffold0157 (16-96)||(23441-23521)


Alignment Details
Target: chr6 (Bit Score: 134; Significance: 1e-69; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 107 - 324
Target Start/End: Original strand, 31109508 - 31109708
Alignment:
Q  107 taagatgtgaaattttagcaatattttagccatgacaaacaataaagttttaggtatggaatacacatttaacagttgacaacctttaaaatatgctgaa 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |                
T  31109508 taagatgtgaaattttagcaatattttagccatgacaaacaataaagttttaggtatggaatacacatttaacagttgacaaccttga------------ 31109595  T
Q  207 aaaatcagtgatccaaaattt---ttaaataagtttgtcactcataaggtaaaccttgatgatccaaaatgtaattttgtcaacttaaaagaacttatca 303  Q
            ||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109596 --------tgatccaaaatgtaatttaaataagtttgtcactcataaggtaaaccttgatgatccaaaatgtaattttgtcaacttaaaagaacttatca 31109687  T
Q  304 tcaactgtaacaacagagtat 324  Q
    |||||||||||||||||||||    
T  31109688 tcaactgtaacaacagagtat 31109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 31109245 - 31109325
Alignment:
Q  19 tgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  31109245 tgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcctat 31109325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 9698350 - 9698436
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| ||||||||||||||||||||||    
T  9698350 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcctat 9698436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 21280012 - 21279926
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||||||| ||||||||||||  | |||||| |||  |||||||||||  | |||||| ||||||||||||||||||||||    
T  21280012 gtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcctat 21279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 13743238 - 13743321
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||| | |||||||| |||| | |||||||||||||||||||    
T  13743238 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 13748738 - 13748821
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||| | |||||||| |||| | |||||||||||||||||||    
T  13748738 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 30014426 - 30014343
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| |||||||| |||  | |||||| |||||||||| ||||| || |||||| |||||||||||||||||||    
T  30014426 gtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 21293694 - 21293780
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||| ||||||||| |||||||||| |  | ||||||||||| | || ||||||||| |||||| |||| |||||||||||||||||    
T  21293694 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcctat 21293780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 3213483 - 3213399
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||| ||||||||| |||||||||| |  | ||||||||||| ||||  |||||||| |||||| |||| |||||||||||||||    
T  3213483 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcct 3213399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 33253996 - 33253913
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| ||| || |||||  ||||||||||||| ||| |  ||| |||||||| | |||||||||||||||||||    
T  33253996 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 27441625 - 27441544
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||||||| |||||||||| |  | ||| || |||| ||| |  |||||||||||||| |||||||||||||||||    
T  27441625 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 7292830 - 7292746
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||||||||   ||||||| |||| | ||||| ||||||||||||||    
T  7292830 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcct 7292746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 7367632 - 7367548
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | |||||| |||| ||||   ||||||| |||| ||||||||| ||||||||||||    
T  7367632 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcct 7367548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 26670026 - 26670110
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | |||| |||||| ||||   |||| || |||||| ||||||||||||||||||||    
T  26670026 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 26670110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 33242486 - 33242402
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| |||||| ||| |  | ||||||||||| |||    |||||||||||| | ||||||||||||||||||||    
T  33242486 gtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcct 33242402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 7273352 - 7273436
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||| ||  | ||||||||||| |||    |||| || |||||| ||||||||||||||||||||    
T  7273352 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcct 7273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 26466882 - 26466798
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||| ||||  | ||||| ||||| |||||  |||| || |||||| |||| |||||||||||||||    
T  26466882 gtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcct 26466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 55272393 - 55272476
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| |||||||||| |  ||||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  55272393 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 28988555 - 28988472
Alignment:
Q  14 tgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||   ||||||| |||||| ||||||||||||||||||||    
T  28988555 tgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcct 28988472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 32728440 - 32728355
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    ||||||||||||||  ||||| ||| |  ||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||||    
T  32728440 gtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttccta 32728355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 712043 - 711959
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| |||||||||| |  ||||| ||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  712043 gtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 711959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 17619169 - 17619252
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| |||||||||| |  ||||||||||||| ||| |  |||||||||||| | |||||||||||||||||||    
T  17619169 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 960890 - 960971
Alignment:
Q  16 agatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    ||||||||||| |||||| |||||  || || ||||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 960971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 35037088 - 35037007
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||||||| |||||||||| |  ||||||||||||| ||| || |||||| ||||||| || ||||||||||||||    
T  35037088 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttt 35037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 1771283 - 1771367
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||||||||||||| ||  | ||||||||||| |||||  |||| || |||||| ||||||||||||||||||||    
T  1771283 gtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 1771367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 27864647 - 27864563
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||| | |||| |||||||||||||||    
T  27864647 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcct 27864563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 55966363 - 55966447
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | |||||| |||| ||||| |||||||| |||||| |||| |||||||||||||||    
T  55966363 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcct 55966447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 3756263 - 3756344
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    ||||||| ||||||  ||||||||| |  ||||||||||||| ||| |  |||||||||||||| |||||||||||||||||    
T  3756263 gtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 27893859 - 27893940
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||| | |||| ||||||||||||    
T  27893859 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 38851596 - 38851515
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    ||||||||||||||||||||| ||| |  ||||||| ||||| | |   ||||||||||||||||| |||||||||||||||    
T  38851596 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaacatttt 38851515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 48463467 - 48463552
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    |||||||||| ||| ||||||||||||  | |||||| |||| |||| ||||||||| |||| | |||| ||||||||||||||||    
T  48463467 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttccta 48463552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 46827752 - 46827807
Alignment:
Q  42 tgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    ||||| ||||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  46827752 tgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 46827807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 41878489 - 41878407
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 95  Q
    |||||||||| ||||||||||||||||  || || ||||||| ||||   ||||||| |||||  ||||||||||||||||||    
T  41878489 gtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 48435596 - 48435682
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||||||| ||| || |||||  ||||||||||||| ||| |  ||| |||||||| | ||||||||||||| ||||||||    
T  48435596 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcctat 48435682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 49229684 - 49229766
Alignment:
Q  16 agatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    ||||||||||| || ||||||| |  ||||||  ||||| ||| |  |||||||||||||||||||||| |||||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttccta 49229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 43735825 - 43735744
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||||||||||||| ||  | |||||  |||||||||  ||||| || |||||||||||||||||| |||||    
T  43735825 gtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 27550389 - 27550309
Alignment:
Q  16 agatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    ||||||| ||| ||||||||||||  | |||| |||||| |||||| ||||  | |||||| |||||||||||||||||||    
T  27550389 agatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 33703224 - 33703140
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| |||   |||||  | |||||| ||||||||||||||||||||    
T  33703224 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcct 33703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 35017815 - 35017733
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||  || || || |||||| |||||||||||||||||||    
T  35017815 gtgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 31680985 - 31680904
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| ||||||||||||  |  | |||||||| |||||||||||||| |||| | |||| | ||||||||||    
T  31680985 gtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 43514703 - 43514784
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| ||||||| ||||  | ||||  ||||| |||||| |||| || |||||| |||||||||||||||||    
T  43514703 gtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 12497036 - 12496956
Alignment:
Q  16 agatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    ||||||| ||| ||||||||| ||  | |||||| |||| |||||| |||| || |||||| ||||||| |||||||||||    
T  12497036 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 25051776 - 25051692
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| |||||  |||| || |||||  ||||||||| ||||||||||    
T  25051776 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcct 25051692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 7617216 - 7617132
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  7617216 gtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcct 7617132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 38470662 - 38470578
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||| ||||||||| |||||||||| |  | ||||||||||| |||||||||||||| |||||| |||| |||||||||||||||    
T  38470662 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcct 38470578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 17208157 - 17208071
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||||||| |||||| ||| |  ||||||||||||| |||  | |||||||||||||| |||||| |||||||||||||||    
T  17208157 gtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcctat 17208071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 2614666 - 2614749
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  2614666 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 22512388 - 22512305
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||||| ||||| |||||| |||| || |||||| |||||||||||||||||||    
T  22512388 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 32473411 - 32473494
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  |||||| |||||| |||    |||||||||||||| |||||||||||||||||||    
T  32473411 gtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 41334680 - 41334763
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||||||||   ||||||| |||||| |||||||||||||||||||    
T  41334680 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 5257078 - 5256997
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||| | |||| ||||||||||||    
T  5257078 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 18034065 - 18033981
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| |||  |||||||||||  | ||| ||||||| |||||| |||| || |||||| ||||||||||||||||||||    
T  18034065 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcct 18033981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 30622736 - 30622819
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    ||||||| |||||| |||||||||| |  |||||||| | || ||| |  |||||||||||||||||||||||||||||||||||    
T  30622736 gtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttcct 30622819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 33801552 - 33801468
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| |||  |||||||||||  | ||||| ||||| |||||  ||||  | |||||||||||||||||||||||||||    
T  33801552 gtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcct 33801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 33855091 - 33855143
Alignment:
Q  44 catggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    ||||||||||| |||||  |||| || |||||| |||||||||||||||||||    
T  33855091 catggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 45705908 - 45705823
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    ||||||||||||||||||||| ||| |  ||||||| ||||| ||| ||||||||||||||||| ||||||| |||||||||||||    
T  45705908 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttccta 45705823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 48119711 - 48119628
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| |||||||||| |  ||||||||||||| ||| |  |||||||||||||| |||||||||||||||||||    
T  48119711 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 44112760 - 44112676
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  44112760 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 44112676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 45639749 - 45639833
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| |||||||||| |  || |||||||||| ||| | ||||||||||||||  ||||||||||||||||||||    
T  45639749 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcct 45639833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 35003377 - 35003294
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| |||||||||| |  || |||||||||| ||| |  |||||||||||||| |||||||||||||||||||    
T  35003377 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 46168466 - 46168383
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| |||||||||| |  ||||| ||||||| ||| | || |||||||||||| |||||||||||||||||||    
T  46168466 gtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 750323 - 750408
Alignment:
Q  14 tgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||  |||| ||   |||| |||||| |||||||||||||||    
T  750323 tgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcctat 750408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 5489859 - 5489775
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| ||||||||||||||||||||    
T  5489859 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 5489775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 38336001 - 38335918
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| |||||||||| |  |||||||| |||| |||    |||||||||||||| |||||||||||||||||||    
T  38336001 gtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 26585543 - 26585461
Alignment:
Q  15 gagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    ||||||||||||  ||||||||| |  ||||||||||||| |||  | ||||||||||||| |||||||| ||||||||||||    
T  26585543 gagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttcct 26585461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 38113212 - 38113297
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    |||||||||||||| |||||| ||  |  ||||||||||||| ||| |  |||||||||||||| ||||||| |||||||||||||    
T  38113212 gtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttccta 38113297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 41065236 - 41065151
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    |||||||||| ||| ||||||  ||||  ||||||||||||| ||  |  |||||||||||||| |||||||||||||||||||||    
T  41065236 gtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttccta 41065151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 37814861 - 37814778
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||| ||||||||| |||||||||| |  | ||||||||||| ||||  |||||||| |||||| |||| ||||||||||||||    
T  37814861 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 43571103 - 43571186
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||   |||| || |||||| |||||||||||||||||||    
T  43571103 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 45427762 - 45427848
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| ||| |||||| |||||  ||||||| ||||| ||| |  |||||||||||| | | ||||||||||||||||||||    
T  45427762 gtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcctat 45427848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 2497579 - 2497660
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| |||||||||| |  |  |||||||||| |||||||||||||| |||| | |||| ||||||||||||    
T  2497579 gtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 7447908 - 7447828
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| |||||||||||||  |  | ||| ||||||| ||||| ||||| || ||||||||||||||||||||||||    
T  7447908 gtgagatgaacttatcaaaatatctgtaatacat-gggtgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 48498979 - 48499063
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | |||| |||||| |||||| ||||  | |||||  ||||||||||||||||||||    
T  48498979 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 48499063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 14427401 - 14427346
Alignment:
Q  42 tgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||| |||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  14427401 tgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 14427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 35000130 - 35000213
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    ||||||| ||||||||||||| |||||  | ||||  || || ||| || |||||||||||| | |||||||||||||||||||    
T  35000130 gtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 23989540 - 23989625
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaa-ggatgttcatgtaacattttcct 97  Q
    ||||||| |||||| ||||||||||||  | ||| |||| || ||| || ||||||| |||| || ||||||||||||||||||||    
T  23989540 gtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttcct 23989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 34304871 - 34304787
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||    
T  34304871 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcct 34304787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 18066735 - 18066820
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    |||||||||| |||  |||||||||||  | |||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  18066735 gtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttccta 18066820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 35181599 - 35181515
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  35181599 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 35181515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 26125718 - 26125637
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| |||||||||||||| |||||| |||| ||||||||||||    
T  26125718 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 36743500 - 36743584
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| ||||||||||||||||||||    
T  36743500 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 36743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 11582849 - 11582766
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  11582849 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 29705445 - 29705362
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||||||||||||||||  | ||||||||||| |||||  ||||  | |||||| |||||||||||||||||||    
T  29705445 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 16603643 - 16603729
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||||||| |||||| ||  |  |||||||||||||||||    |||||||||||||| ||| ||||||||||||||||||    
T  16603643 gtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttcctat 16603729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 29800967 - 29801053
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||| | |||| |||||||||||| ||||    
T  29800967 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttctat 29801053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 20148843 - 20148757
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| ||| ||||||||||||  |  ||| |||||| ||||| |||||||| |||||| |||| |||||||||||| ||||    
T  20148843 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttctat 20148757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 31384747 - 31384661
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| ||| |||||||| |||  | ||||||||||| ||| ||||||| || |||||| ||||||||||| | ||||||||    
T  31384747 gtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaatactttcctat 31384661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 30660762 - 30660843
Alignment:
Q  16 agatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    ||||||| ||| ||||||||||||  | ||| ||||||| ||||| |||||  | |||||| ||||||||||||||||||||    
T  30660762 agatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcct 30660843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 5754986 - 5754902
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  |  ||||| |||| ||||| ||||| || |||| | ||||||||||||||||||||    
T  5754986 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcct 5754902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 16358850 - 16358933
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttc-atgtaacattttc 95  Q
    ||||||||||||||||||||||| | |  |||||||| |||| ||| |  |||||||||||||| | ||| |||||||||||||    
T  16358850 gtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaacattttc 16358933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 2547079 - 2546993
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| |||  |||||||||||  | |||| |||||| |||||| ||||  | |||||  ||||||||||||||||||||||    
T  2547079 gtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcctat 2546993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 19386637 - 19386671
Alignment:
Q  63 tgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| ||||||||||||||||||||    
T  19386637 tgtatgattaaagggtgttcatgtaacattttcct 19386671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 33630010 - 33630091
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| |||  ||||| |||||  ||||| ||||||| ||||   |||||||||||||| ||||| |||||||||||    
T  33630010 gtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 42295278 - 42295197
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| ||||||||||||  | ||||| ||||| ||||   |||| || |||||| |||||||||||||||||    
T  42295278 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 40237002 - 40236918
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||    
T  40237002 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcct 40236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 31408650 - 31408732
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 95  Q
    |||| ||||||||| |||||||||| |  |||||||| |||| ||| || |||||||||||||| ||||||||||||||||||    
T  31408650 gtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 24001029 - 24001112
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  24001029 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 31513370 - 31513287
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| |||||||||| |  |||||||||| || ||| |  |||||||||||||  |||||||||||||||||||    
T  31513370 gtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 42538448 - 42538531
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  42538448 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 42972935 - 42972852
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | |||| |||||| |||||| |||| || ||||||||||||| ||||||||||||    
T  42972935 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 24280613 - 24280699
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||||||| ||||||||  || ||||||||| |||| ||| |  ||||||| |||||| |||||| |||||||||||||||    
T  24280613 gtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcctat 24280699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 43317526 - 43317440
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||||||||||||||||||||   |||| || |||| ||||   ||||||| |||| | ||||||||||||||||||||||    
T  43317526 gtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcctat 43317440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 10573832 - 10573751
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||||||| |||||||| |||  | ||||||||||| ||| | |||||||| |||||| |||| ||||||||||||    
T  10573832 gtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 33384954 - 33384869
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataat-ggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| |||||| |||||  ||||||| || || ||| ||  |||||||||||| ||||||||||||||||||||||    
T  33384954 gtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttcct 33384869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 44326261 - 44326175
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| ||| ||||||||||||  |  ||| |||||| ||||| |||||||| |||||| |||| |||||||||||| ||||    
T  44326261 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttctat 44326175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 5194248 - 5194333
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    ||||||||||||||||||||||||| |    ||| ||||||| ||||   ||||||| |||| | |||||||||||||||||||||    
T  5194248 gtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttccta 5194333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 27535279 - 27535332
Alignment:
Q  44 catggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    ||||| ||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  27535279 catggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 27535332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 43343641 - 43343722
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||||||||||||||||  | ||||||||||| ||| |  ||||  | |||| |||||||||||||||||||    
T  43343641 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 44416951 - 44417032
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||||||||||||||||  | ||||||||||| ||| |  ||||  | |||| |||||||||||||||||||    
T  44416951 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 5015478 - 5015394
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | |||| |||||| |||||| ||||  | |||||  ||||||||||||||||||||    
T  5015478 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 5015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 5810941 - 5811024
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||||||||||||||||  |  || ||||||| |||||  |||| || |||||| || ||||||||||||||||    
T  5810941 gtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 39998475 - 39998408
Alignment:
Q  29 aaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||  | ||||||||||| ||| | |||||||||||||   |||||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 9216384 - 9216299
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| ||| ||||||||| ||  |||||||| |||| ||| | || || || |||||| ||||||||||||||||||||||    
T  9216384 gtgagatgaacttaccaaaatatctctaatgcatggg-tgtacaataggatataggaataaagggtgttcatgtaacattttcctat 9216299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 4638216 - 4638297
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| |||||||||| |  |  |||||||||| ||| || ||||||| |||| | |||||||||||||||||    
T  4638216 gtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 35069804 - 35069719
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    |||||||||| ||| ||||||||||||  | |||| |||||| ||||   |||| || |||||  |||||||||||||||||||||    
T  35069804 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttccta 35069719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 41861722 - 41861673
Alignment:
Q  48 gggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    ||||||||||| |  ||||||| |||||| ||||||||||||||||||||    
T  41861722 gggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcct 41861673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 9434207 - 9434123
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  9434207 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 9434123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 36150213 - 36150130
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||| | ||| |||||||||||||  ||||||| |||||| | |||||||||||||||||    
T  36150213 gtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 45126945 - 45127028
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||||| |||| ||||||||||||||    
T  45126945 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 42394436 - 42394518
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 95  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||||||||| || |||||| ||||||||||||||||||    
T  42394436 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 10457909 - 10457993
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    ||||||| |||||| |||||||||| |  ||||||||||||| ||| |  |||||||||||| | ||||||||||||||||||||    
T  10457909 gtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcct 10457993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 46941136 - 46941052
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||  ||||| || |||||| ||||||||||||||||||||    
T  46941136 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcct 46941052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 52627994 - 52628078
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| |||||||| | |  |||||| |||||| ||| | ||||||||||||||| |||||| |||||||||||||    
T  52627994 gtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcct 52628078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 53581875 - 53581961
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| ||||||||||||||||  | ||| || |||| |||||| ||||||| |||||  ||||||||||||||||| ||||    
T  53581875 gtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttttctat 53581961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 54237179 - 54237097
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 95  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| ||||||||||||||||||    
T  54237179 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 25996351 - 25996266
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    |||||||||||||| |||||| ||| |  |  |||||||||| |||   ||||||||||||||| |||||||||||||||||||||    
T  25996351 gtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttccta 25996266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 4190282 - 4190366
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| ||||||||| ||  | |||  |||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  4190282 gtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 4190366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 24688419 - 24688503
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| |||||| ||||  | |||||| ||||||||||||||||||||    
T  24688419 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcct 24688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 42100771 - 42100688
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| ||||   |||| || |||||| |||||||||||||||||||    
T  42100771 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 40808948 - 40808864
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| |||||  |||| || |||| | |||| |||||||||||||||    
T  40808948 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcct 40808864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 34791912 - 34791829
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| |||| ||||| |||||  |||||| ||| || |||    |||||||||||||| |||||||||||||||||||    
T  34791912 gtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 25413764 - 25413678
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||| |||  |||||||||||  | |||  |||||| |||||  |||| || |||||| ||||||||||||||||||||||    
T  25413764 gtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcctat 25413678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 27748646 - 27748565
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| ||||||||||||  | |||  |||||||||||   ||||||| |||| | |||||||||||||||||    
T  27748646 gtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 47191043 - 47191126
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||||||||||||| ||  | |||||| |||| ||||   |||| || |||||| ||||||||||||||||||||    
T  47191043 gtgagatgaacttatcaaaatatctctaatacatggg-tgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 47191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 54246165 - 54246249
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| |||  |||||||| ||  | ||| ||||||| |||||  |||| || |||||| ||||||||||||||||||||    
T  54246165 gtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 54246249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 41281991 - 41282072
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| |||||||||| |||||  ||||||||||||| ||| |  |||||||||||||| |||||||||||||||||    
T  41281991 gtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 16804051 - 16803967
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| |||||||||| |||||  |||||||| |||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  16804051 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 16843333 - 16843249
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| |||||||||| |||||  |||||||| |||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  16843333 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 16843249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 43114640 - 43114556
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  43114640 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 43114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 8896600 - 8896686
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||||||| |||||||| |||  || || ||||||| |||||||||| ||| |||||| ||||||||||||||||| ||||    
T  8896600 gtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttttctat 8896686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 19047240 - 19047158
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 95  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||||||||| || |||||| ||||||||||||||||||    
T  19047240 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 6518486 - 6518566
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| || |||||||||||||| |||||||||||||||||    
T  6518486 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagg-tgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 11825671 - 11825752
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||| |||||||||||||||||    
T  11825671 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 18491788 - 18491702
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    |||||||||||||| |||||| | | |  |||||| |||||| ||| |  |||||||||||||| ||||||||||||||||||||||    
T  18491788 gtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctat 18491702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 42026852 - 42026764
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaa--ggatgttcatgtaacattttcctat 99  Q
    |||||||||||||  ||||||||||||  |||  ||| |||| |||||||||||||| ||||  || ||||||||||||||||||||||    
T  42026852 gtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttcctat 42026764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 966851 - 966935
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| |||||  | | |  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  966851 gtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 16096815 - 16096747
Alignment:
Q  28 caaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    ||||||||||||  | |||||||||||||||||  |||| || |||||| |||||||||||||||||||    
T  16096815 caaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 12415477 - 12415560
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    ||||||| || ||| |||||| |||||  ||||||||||||| |||    |||||||||||||| |||||||||||||||||||    
T  12415477 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 12427537 - 12427620
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    ||||||| || ||| |||||| |||||  ||||||||||||| |||    |||||||||||||| |||||||||||||||||||    
T  12427537 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 34817793 - 34817875
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 95  Q
    |||||||||||||| |||||| | | | |||||||||||||| ||||   ||| ||| |||||| ||||||||||||||||||    
T  34817793 gtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 30838715 - 30838630
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 98  Q
    |||||||||| ||| ||||||||||||  | ||||||||||| |||   |||||  | |||||| |||||||||||||||||||||    
T  30838715 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttccta 30838630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 43490419 - 43490504
Alignment:
Q  14 tgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 99  Q
    ||||||||| ||| ||||||||||||  | ||| | ||||| ||||| ||||| || |||||| ||||||||||||||||| ||||    
T  43490419 tgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttttctat 43490504  T

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Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 34895758 - 34895842
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||||||| ||| || |||||  ||||||||||||| ||| |  ||| |||||||| | ||||||||||||| ||||||    
T  34895758 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcct 34895842  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 1750497 - 1750414
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||| |||  |||||||||||  | ||| ||||||| |||||  |||| || |||||| |||||||||||||||||||    
T  1750497 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 13780752 - 13780835
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||||||||||||||||  || |||||||||| ||||   ||| ||| ||||   |||| ||||||||||||||    
T  13780752 gtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 4299437 - 4299518
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||||||| |||||| ||  |  ||||||| ||||| ||| |  |||||||||||||| ||||||| |||||||||    
T  4299437 gtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 12302270 - 12302354
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| |||  |||||||||||  | ||| ||||||| |||||  ||||  | |||||| ||||||||||||||||||||    
T  12302270 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 12302354  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 43335780 - 43335864
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | |||||| |||| ||||   |||| || |||| ||||||||| ||||||||||||    
T  43335780 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcct 43335864  T

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Target: scaffold0038 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 112738 - 112656
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 95  Q
    |||||||||| ||| ||||||||||||  | ||| ||||||| ||||||||||| || |||||| ||||||||||||||||||    
T  112738 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 45736 - 45817
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 94  Q
    |||||||||||||| |||||||||| |  | ||| || |||| ||| |  |||||||||||||| |||||||||||||||||    
T  45736 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

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Target: scaffold0385 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 11334 - 11250
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  |  |||||||||| |||||  ||||||| |||||  ||||||||| ||||||||||    
T  11334 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcct 11250  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 768 - 684
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 97  Q
    |||||||||| ||| ||||||||||||  | |||| |||||| ||||   |||| || |||||| ||||||||||||||||||||    
T  768 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 684  T

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Target: scaffold0100 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 35473 - 35556
Alignment:
Q  13 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    |||||||||||||| ||| || |||||  ||||||||||||| |||    |||||||||||| | |||| ||||||||||||||    
T  35473 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 23441 - 23521
Alignment:
Q  16 agatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 96  Q
    ||||||| ||| ||||||||| ||  | |||||| |||| |||||| |||| || |||||| ||||||| |||||||||||    
T  23441 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

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