View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2028_low_6 (Length: 450)
Name: NF2028_low_6
Description: NF2028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2028_low_6 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 11 - 427
Target Start/End: Original strand, 30842202 - 30842622
Alignment:
| Q |
11 |
tttggcttttaatatctggatggtta----gacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttct |
106 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30842202 |
tttggcttttaatatctggatggttagttagacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttggaggtcttggaggtttct |
30842301 |
T |
|
| Q |
107 |
tcaaaaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataac |
206 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
30842302 |
ccaaaaaagtctcgtctaacttttaatattatttggatttaaacttttttaacgatttggaaggaccataatatgatacatttttacaataaatcagaac |
30842401 |
T |
|
| Q |
207 |
aacttctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgattgagtattcgatttgaaggttaaatc |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30842402 |
aacttctatctttattggaaaaggtaaaacaccaagcattttggtggtttaaatcttattatgctgtttttgattgagtatttgatttgaaggttaaatc |
30842501 |
T |
|
| Q |
307 |
ctttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaacttt |
406 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30842502 |
ctttattatgttttcaggatgtaacgtaattttatttttcttggctactttgtcgtaacatgtggattgtctcattgcaatttttagatactttaacttt |
30842601 |
T |
|
| Q |
407 |
ctttggtacaccttgtgttag |
427 |
Q |
| |
|
||||| || ||||||| |||| |
|
|
| T |
30842602 |
ctttgatataccttgtattag |
30842622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 126 - 422
Target Start/End: Original strand, 11573107 - 11573404
Alignment:
| Q |
126 |
cttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaacttctatctttattgga |
225 |
Q |
| |
|
||||||||||||||||||||| |||| |||| || ||||||||||| |||||||||| || |||| |||||||||| |||||||||||||||||||| | |
|
|
| T |
11573107 |
cttttaatattatttggattttaactctttttactatttggaaggatcgcaatatgagac-ttttcacaataaatcggaacaacttctatctttattgaa |
11573205 |
T |
|
| Q |
226 |
aaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgatt--gagtattcgatttgaaggttaaatcctttattatgttttcag |
323 |
Q |
| |
|
||| || |||| ||| || ||||||||| | ||| | ||||||| ||| || |||| |||||||| |||| | ||||| ||||||||||||||| ||| |
|
|
| T |
11573206 |
aaaagttaaacgccaagctttttggtggctcaaaccctattatgttgtattcgattttgagtattcagtttggaagttaagtcctttattatgtttccag |
11573305 |
T |
|
| Q |
324 |
gttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttctttggtacaccttgt |
422 |
Q |
| |
|
||| ||| |||||||||||||||||| |||| |||| ||||| |||||||| || || ||||| | ||||||||| ||| |||||||||||||||| |
|
|
| T |
11573306 |
gttttaaagtaattttatttttcttggctacattgtggtagcttgtggattttccttttttaatttttggatactttagcttcctttggtacaccttgt |
11573404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 423
Target Start/End: Original strand, 31666084 - 31666435
Alignment:
| Q |
67 |
tttgagcactttcttcagtttgaaggtcttggaggtttcttcaaaaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttgg |
166 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||| || || ||| || |||| || | |||||||||||||||||||||||| |||| ||| || || ||| |
|
|
| T |
31666084 |
tttgagcattttcttccgtttgaaggttttggggggtttttccaacaagtttcatttgacttttaatattatttggatttcaactcattttactatatgg |
31666183 |
T |
|
| Q |
167 |
aaggaccgcaatatgatacatttttacaataaatcataacaacttctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttatt |
266 |
Q |
| |
|
||||||| || ||||| |||||| ||||||| || |||| |||||| | ||||||||| | ||||| || |||||||||||||||| | ||| |
|
|
| T |
31666184 |
aaggaccacagtatgaggcattttcacaataa---atttgaactgctatctatcttggaaaagattaaacttcaactcttttggtggtttaaatttcatt |
31666280 |
T |
|
| Q |
267 |
atgctgtttttga--ttgagtattcgatttgaaggttaaatcctttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtag |
364 |
Q |
| |
|
||| |||||| || || |||||||| || | ||||| ||||||||||||||| ||||||| |||||||||| ||||| ||| ||||| || | |
|
|
| T |
31666281 |
atgatgttttggattttaagtattcg----gaggtcaaaatcttttattatgttttcatattgtaacataattttattcttcttagctattttgtggttg |
31666376 |
T |
|
| Q |
365 |
catgtggattgtctcattgcaatttctagatactttaactttctttggtacaccttgtg |
423 |
Q |
| |
|
||||||||| ||| |||| ||||| | |||||| | ||| |||||||| |||||||| |
|
|
| T |
31666377 |
catgtggatcctcttattgtaatttttgaatacttaagcttcctttggtataccttgtg |
31666435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 172; Significance: 3e-92; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 17 - 427
Target Start/End: Complemental strand, 14128101 - 14127693
Alignment:
| Q |
17 |
ttttaatatctggatggttagacatctcaatgactcttcaaggttccttctttgagcacttt-cttcagtttgaaggtcttggaggtttcttcaaaaaag |
115 |
Q |
| |
|
|||||||||| |||||||||| |||||||| | |||||||||||||||| |||||||| ||| |||||||| | |||| |||| ||||||| ||| || | |
|
|
| T |
14128101 |
ttttaatatc-ggatggttaggcatctcaacggctcttcaaggttccttatttgagcatttttcttcagttgggaggt-ttgggggtttctccaacaa-g |
14128005 |
T |
|
| Q |
116 |
tctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaacttctat |
215 |
Q |
| |
|
|||||| | |||||||||| |||||||||| | || |||| || |||||||||||||||||||||| || ||| |||||||||| |||||||||||| |
|
|
| T |
14128004 |
tctcgtttatcttttaatatcatttggatttcagctctttttactatttggaaggaccgcaatatgaggcaatttcacaataaatcggaacaacttctat |
14127905 |
T |
|
| Q |
216 |
ctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgatt--gagtattcgatttgaaggttaaatcctttatt |
313 |
Q |
| |
|
|||||||| ||||| ||| ||||| ||||||| |||| ||||||| |||||| | ||||||||| ||||||||| |||| ||||||||||||||| | |
|
|
| T |
14127904 |
ctttattgaaaaagttaa--ctccaagcattttagtggcttaaatcgtattattatatttttgattttgagtattcggtttggaggttaaatcctttaat |
14127807 |
T |
|
| Q |
314 |
atgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttctttggt |
413 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||| ||||||||| |||||||||| |
|
|
| T |
14127806 |
atgttttcaggttgtaatataattttatttttcttgactactttgtggtagcctgtggattgtcttattgtaatttctggatactttagttttctttggt |
14127707 |
T |
|
| Q |
414 |
acaccttgtgttag |
427 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
14127706 |
acatcttgtgttag |
14127693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 11 - 359
Target Start/End: Complemental strand, 4259444 - 4259102
Alignment:
| Q |
11 |
tttggcttttaatatctggatggttagacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttcttcaa |
110 |
Q |
| |
|
|||||||||| ||||| || |||||||||||||||| |||||||||||||||||| ||| | || ||||||||||||| |||| |||| |||||| ||| |
|
|
| T |
4259444 |
tttggcttttgatatcgggttggttagacatctcaacgactcttcaaggttccttatttcaacattttcttcagtttggaggtgttgggagtttctccaa |
4259345 |
T |
|
| Q |
111 |
aaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaact |
210 |
Q |
| |
|
|| ||| ||| |||||||||| ||||||||||||| ||||||||| || |||| |||||| |||||||||| | |||| ||||||||||| || ||| |
|
|
| T |
4259344 |
caa-gtcacgtttgacttttaacattatttggatttcaactttttttactatttagaaggatcgcaatatgagattttttcacaataaatcaaaatgact |
4259246 |
T |
|
| Q |
211 |
tctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgattgagtattcgatttgaaggttaaatccttt |
310 |
Q |
| |
|
|||||||||||||||||| || |||||||| | ||||||||| | ||||||| ||||| | | || || ||||| |||| ||||||| |||||| |
|
|
| T |
4259245 |
tctatctttattggaaaatgttaaactccaggttttttggtggatcaaatcttgttatgttatattcga-----tattcagtttggaggttaagtccttt |
4259151 |
T |
|
| Q |
311 |
attatgttttcaggttgtaacgtaattttatttttcttgactactttgt |
359 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
4259150 |
attatgtttaatggttgtaacgtaattttatttttcttggctacattgt |
4259102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 373
Target Start/End: Original strand, 34117910 - 34118203
Alignment:
| Q |
83 |
agtttgaaggtcttggagg-tttcttcaaaaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaata-t |
180 |
Q |
| |
|
|||||||||||||||| || ||| || || ||| || || |||||||||| | ||||||||||||||| |||| || || ||||||||| |||||| | |
|
|
| T |
34117910 |
agtttgaaggtcttggggggtttttttcaacaagacttgtttgacttttaacttaatttggatttaaactctttttactatatggaaggacagcaataat |
34118009 |
T |
|
| Q |
181 |
gatacatttttacaataaatcataacaacttctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttg-a |
279 |
Q |
| |
|
|| |||||| ||||||||| |||||| ||||||||||| ||||| | ||||| || | |||||||| ||||||||| |||||||||||||| | |
|
|
| T |
34118010 |
gaagcattttcacaataaattgaaacaaccgttatctttattgaaaaagattaaactacaagtcttttggtgatttaaatctcattatgctgttttttta |
34118109 |
T |
|
| Q |
280 |
ttgagtattcgatttgaaggttaaatcctttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggat |
373 |
Q |
| |
|
||||||||||| | || |||||||||| ||||||||||||| || |||| |||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
34118110 |
ttgagtattcggtgtggaggttaaatcatttattatgtttttagacggtaatataattttattcttcttgactactttgtggtagcatgtggat |
34118203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 20662754 - 20662898
Alignment:
| Q |
213 |
tatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgatt-gagtattcgatttgaaggttaaatccttta |
311 |
Q |
| |
|
||||||||||| ||||||| ||||| | |||||||||||||||| || ||||||||| ||||| || ||||||||| |||| |||||||||| | || |
|
|
| T |
20662754 |
tatctttattg-aaaaggttaaactttaaacattttggtggtttaattcctattatgctatttttattttgagtattcggtttggaggttaaatcttcta |
20662852 |
T |
|
| Q |
312 |
ttatgttttcaggttgtaacgtaattttatttttcttgactacttt |
357 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20662853 |
ttatgtttttaggttgtaacgtaattttatttttcttggctacttt |
20662898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 167; Significance: 3e-89; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 11 - 406
Target Start/End: Complemental strand, 4780657 - 4780262
Alignment:
| Q |
11 |
tttggcttttaatatctggatggttagacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttcttcaa |
110 |
Q |
| |
|
|||||||||||||| | |||||||||| |||||||| |||||| ||||||| || ||||| || ||||||| ||||| ||||||||| ||||| ||| | |
|
|
| T |
4780657 |
tttggcttttaataacgggatggttaggcatctcaacaactctttaaggttctttatttgaacattttcttctgtttgcaggtcttgggggttt-ttcca |
4780559 |
T |
|
| Q |
111 |
aaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaact |
210 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||| |||| |||| || |||||||| ||||||||||||| ||||||| |||||||||| ||||||| |
|
|
| T |
4780558 |
acaagtctcgtttgacttttaatattatttggatttcaactctttttactatttggaatgaccgcaatatgagacattttcacaataaatcgaaacaact |
4780459 |
T |
|
| Q |
211 |
tctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttga--ttgagtattcgatttgaaggttaaatcct |
308 |
Q |
| |
|
||||||||||||| ||||||| |||| ||| | ||||| |||||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||| |
|
|
| T |
4780458 |
tctatctttattgaaaaaggttaaacaccaagtattttagtggtttaaatcttattatgatgtttttgattttgagtatttgatttggaggttaaatcct |
4780359 |
T |
|
| Q |
309 |
ttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaacttt |
406 |
Q |
| |
|
||||| |||||||| |||||||| |||||| | |||| ||| |||||||| ||| | |||||||||| || ||| || || |||||||||||||| |
|
|
| T |
4780358 |
ttattgtgttttcaagttgtaacataatttaaatttt-ttggctactttgcagtaccttgtggattgtttcgttgtaactttcggatactttaacttt |
4780262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 421
Target Start/End: Complemental strand, 30462510 - 30462332
Alignment:
| Q |
245 |
ttttggtggtttaaatcttattatgctgtttttgatt--gagtattcgatttgaaggttaaatcctttattatgttttcaggttgtaacgtaattttatt |
342 |
Q |
| |
|
||||||||| | ||||||||| ||| ||| || |||| |||||||| || | ||||||| || ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
30462510 |
ttttggtggctcaaatcttataatgttgtattcgattttgagtattcagttcggaggttaagtcttttattatgttttcatgttgtaacgtaattatatt |
30462411 |
T |
|
| Q |
343 |
tttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttctttggtacaccttg |
421 |
Q |
| |
|
||||||| |||| |||| ||||| |||| ||| | ||| ||||| | ||||||||||||| ||||||||| ||||| |
|
|
| T |
30462410 |
tttcttggctacattgtggtagcttgtgaatttttcttttgtaatttttggatactttaacttcctttggtacgccttg |
30462332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 84 - 270
Target Start/End: Complemental strand, 33468429 - 33468246
Alignment:
| Q |
84 |
gtttgaaggtcttggaggtttcttcaaaaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgat |
183 |
Q |
| |
|
||||| ||||||||| || || ||| || ||||||| | || |||||||||| ||||||| || || ||||| | ||||||||||| |||||||||| |
|
|
| T |
33468429 |
gtttggaggtcttgggggctt-ttccaacaagtctcatttggcttttaatataatttggagttcaatttttt--attatttggaaggatcgcaatatgag |
33468333 |
T |
|
| Q |
184 |
acatttttacaataaatcataacaacttctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgc |
270 |
Q |
| |
|
||||||||| | ||| ||||||||||| ||||||||| |||| || ||||| || |||| ||||||||| ||||| |||||||| |
|
|
| T |
33468332 |
acatttttatagtaagacataacaactttcctctttattgaaaaaagttaaacttcaagcatattggtggttaaaatcgtattatgc |
33468246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 4892470 - 4892542
Alignment:
| Q |
292 |
tttgaaggttaaatcctttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtag |
364 |
Q |
| |
|
|||| |||||||||| ||| |||| |||||| ||||| || |||||||||||||||| |||||||||| |||| |
|
|
| T |
4892470 |
tttggaggttaaatcttttcttattttttcatgttgtgacataattttatttttcttaactactttgtggtag |
4892542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 155; Significance: 4e-82; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 11 - 410
Target Start/End: Complemental strand, 31826924 - 31826524
Alignment:
| Q |
11 |
tttggcttttaatatctggatggttagacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttcttcaa |
110 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||| |||| | |||||||| |||||||| ||||||| ||||||||||||||| ||||| ||| | |
|
|
| T |
31826924 |
tttgacttttaatattgggatggttaggcatctcaacaactcactatggttccttatttgagcattttcttcggtttgaaggtcttggtggttt-ttcca |
31826826 |
T |
|
| Q |
111 |
aaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaact |
210 |
Q |
| |
|
| |||||| | ||||||||||||||||||| |||| |||| |||| | ||| ||||||||||| ||||||| ||||||| ||||||||| |||| | |
|
|
| T |
31826825 |
acaagtcttatttgacttttaatattatttgaatttcaactctttttatgatatggaaggaccggaatatgagacattttcacaataaattggaacagtt |
31826726 |
T |
|
| Q |
211 |
tctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgatt--gagtattcgatttgaaggttaaatcct |
308 |
Q |
| |
|
|| |||||||||||||| | |||||||| | |||||||||||||||||| |||||||||||||||||| ||||||||| |||| |||||||||| | |
|
|
| T |
31826725 |
gcttactttattggaaaagattaaactccaatccttttggtggtttaaatctcattatgctgtttttgattttgagtattcggtttggaggttaaatctt |
31826626 |
T |
|
| Q |
309 |
ttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttct |
408 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||| |||| |||| ||||||||||||| |||| |||| ||||| | ||||||||| ||| || |
|
|
| T |
31826625 |
ttattatgttttcgggttgtaaagtaattttatttttcttgtctaccttgtggtagcatgtggatcgtcttattgtaatttttggatactttagcttcct |
31826526 |
T |
|
| Q |
409 |
tt |
410 |
Q |
| |
|
|| |
|
|
| T |
31826525 |
tt |
31826524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 11 - 422
Target Start/End: Complemental strand, 18506470 - 18506058
Alignment:
| Q |
11 |
tttggcttttaatatctggatggttagacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttcttcaa |
110 |
Q |
| |
|
|||||||||||||||| |||| ||||| ||||||| |||||||||| || |||| |||||| ||||||||||||| |||||||| ||||| ||| | |
|
|
| T |
18506470 |
tttggcttttaatatcaggatagttaggaatctcaacgactcttcaaagtcccttatttgagatatttcttcagtttggtggtcttgggggttt-ttcca |
18506372 |
T |
|
| Q |
111 |
aaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaact |
210 |
Q |
| |
|
| ||||| ||| | ||||||||||||||||||||| |||| |||| || ||||||||||| |||||||| | ||| ||| |||||||||| ||||||| |
|
|
| T |
18506371 |
acaagtcccgtttagcttttaatattatttggatttcaactctttttactatttggaaggatcgcaatataagacaatttcacaataaatcggaacaact |
18506272 |
T |
|
| Q |
211 |
tctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgat--tgagtattcgatttgaaggttaaatcct |
308 |
Q |
| |
|
|||| ||| ||||||||| | |||||||| | ||||||| ||||||||||||||||||||||||| || |||||||||| |||| ||||||||| | |
|
|
| T |
18506271 |
gctatatttgttggaaaagattaaactccaagtcttttggtagtttaaatcttattatgctgttttttattatgagtattcggtttggaggttaaattat |
18506172 |
T |
|
| Q |
309 |
ttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttct |
408 |
Q |
| |
|
||||||||| |||||||| ||| |||||| |||||| ||| ||||||||| ||||||||||||||| || | || ||||| | ||| ||||||||| || |
|
|
| T |
18506171 |
ttattatgtcttcaggttacaacataatttaattttttttggctactttgtggtagcatgtggattgccttactgtaatttttggattctttaacttcct |
18506072 |
T |
|
| Q |
409 |
ttggtacaccttgt |
422 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
18506071 |
ttggtacaccttgt |
18506058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 78 - 260
Target Start/End: Original strand, 12150821 - 12151002
Alignment:
| Q |
78 |
tcttcagtttgaaggtcttggaggtttcttcaaaaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaa |
177 |
Q |
| |
|
||||||||||| |||| |||| | ||| ||| || |||||| || |||||||||||||||||||||||| |||| |||| || || |||||||||||||| |
|
|
| T |
12150821 |
tcttcagtttggaggttttggggattt-ttccaacaagtcttgtttgacttttaatattatttggatttcaactctttttactatatggaaggaccgcaa |
12150919 |
T |
|
| Q |
178 |
tatgatacatttttacaataaatcataacaacttctatctttattggaaaaggtaaaactccacgcattttggtggtttaaat |
260 |
Q |
| |
|
||||| |||||||||||||||||| |||| || |||||||||||| ||||| | ||||| || | ||||||| |||||||| |
|
|
| T |
12150920 |
tatgagacatttttacaataaatcggaacacctgctatctttattgaaaaagattaaactacaagtcttttggttgtttaaat |
12151002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 12151039 - 12151138
Alignment:
| Q |
311 |
attatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttcttt |
410 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| |||||| ||||||||| ||| ||| ||||| |||| |||| ||||| || |||||||||||| |||| |
|
|
| T |
12151039 |
attatgtttttaggttgtaacataattttattcttcttggctactttgtggtaacatatggatcgtcttattgtaatttttaaatactttaacttccttt |
12151138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 140; Significance: 4e-73; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 50 - 374
Target Start/End: Original strand, 18285744 - 18286068
Alignment:
| Q |
50 |
ctcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttcttcaaaaaagtctcgtctgacttttaatattatttggatttaaa |
149 |
Q |
| |
|
|||||||||||||||| ||| |||| ||||||||||||| |||| |||| ||||||| || || ||||||| |||||||||| ||||||| ||||| | |
|
|
| T |
18285744 |
ctcttcaaggttccttattttagcattttcttcagtttggaggtgttgg-ggtttctccattaa-gtctcgtttgacttttaacattatttagatttcag |
18285841 |
T |
|
| Q |
150 |
cttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaacttctatctttattggaaaaggtaaaactccacgcattttg |
249 |
Q |
| |
|
|| |||| || ||||||||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| || ||| |
|
|
| T |
18285842 |
ctctttttactatttggaaggatcgcaatatgagacattttcacaataaatcggaacaacttctatctttattggaaaaggttaaactccaagcttttat |
18285941 |
T |
|
| Q |
250 |
gtggtttaaatcttattatgctgtttttga--ttgagtattcgatttgaaggttaaatcctttattatgttttcaggttgtaacgtaattttatttttct |
347 |
Q |
| |
|
||| | ||||||||||||| ||||||||| |||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18285942 |
ttggctcaaatcttattatgttgtttttgattttgagtattcagtctggaggttaagtcctttattatgtttttaggttgtaacgtaattttatttttct |
18286041 |
T |
|
| Q |
348 |
tgactactttgtcgtagcatgtggatt |
374 |
Q |
| |
|
|||||| |||| ||||| |||||||| |
|
|
| T |
18286042 |
tgactatattgtggtagcttgtggatt |
18286068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 11 - 378
Target Start/End: Original strand, 46481941 - 46482294
Alignment:
| Q |
11 |
tttggcttttaatatctggatggttagacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttctt--- |
107 |
Q |
| |
|
||||||||||| |||| |||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||| |||| |||| |||| || |
|
|
| T |
46481941 |
tttggctttta-tatcgggatggttaggtatctcaatgactcttcaaggtttcttatttgagcattttcttcagtttggaggttttgggagttttttatt |
46482039 |
T |
|
| Q |
108 |
-caaaaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataac |
206 |
Q |
| |
|
| || ||||||||| |||||||||||||||||| |||| | || |||| || |||| |||||| |||||||||| |||||| | ||||||| | ||| |
|
|
| T |
46482040 |
tccaacaagtctcgtttgacttttaatattatttcaatttcagctctttttactatttagaaggatcgcaatatgaggcattttcataataaattagaac |
46482139 |
T |
|
| Q |
207 |
aacttctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttga--ttgagtattcgatttgaaggttaaa |
304 |
Q |
| |
|
| || | |||||||| || |||||||||||||||||||||||||||| ||||||| | || |||||| |||| |||||||| |
|
|
| T |
46482140 |
agctgccatctttat-----------------ca-gcattttggtggtttaaatcttattatgttgttttttattttaagtattaagtttggaggttaaa |
46482221 |
T |
|
| Q |
305 |
tcctttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtct |
378 |
Q |
| |
|
|| ||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||| ||| |||| |
|
|
| T |
46482222 |
tcatttattatgttttcatattgtaac-taattttatttttcttagctactttgtggtagcatgtagatcgtct |
46482294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 292 - 420
Target Start/End: Complemental strand, 17201612 - 17201484
Alignment:
| Q |
292 |
tttgaaggttaaatcctttattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttct |
391 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||| | || |||||||||||| ||||||| |
|
|
| T |
17201612 |
tttgaaggttaaatcatttattatgttttcatgttgtaacgtgattttatttttcttagctactttgtcatagcttatgaattgtctcattgtaatttct |
17201513 |
T |
|
| Q |
392 |
agatactttaactttctttggtacacctt |
420 |
Q |
| |
|
||||||||| |||| ||||||||||||| |
|
|
| T |
17201512 |
cgatactttagctttttttggtacacctt |
17201484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 423
Target Start/End: Original strand, 1190900 - 1190986
Alignment:
| Q |
337 |
tttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttctttggtacaccttgtg |
423 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| || || | ||||||| |||||||||||||| |||||| |
|
|
| T |
1190900 |
tttatttttcttgactactttgtcgtagtttgtggattgtctcattgtaaattttgactactttagctttctttggtacatcttgtg |
1190986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 17203385 - 17203314
Alignment:
| Q |
206 |
caacttctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgttttt |
277 |
Q |
| |
|
||||| |||| ||||||| ||||||| |||||||| |||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
17203385 |
caactcctatttttattgaaaaaggttaaactccaagcattttggtggtttaaatcatattatgctattttt |
17203314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 124; Significance: 1e-63; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 113 - 423
Target Start/End: Complemental strand, 29023338 - 29023026
Alignment:
| Q |
113 |
aagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaacttc |
212 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||| | || |||| || |||||||||||||| ||||||| | ||||| |||| ||||| ||||||||| |
|
|
| T |
29023338 |
aagtcacgtctcacttttaatattatttggatttcacctctttttacaatttggaaggaccgaaatatgagatattttcacaacaaatcg-aacaacttc |
29023240 |
T |
|
| Q |
213 |
tatctttattggaaaa-ggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttga--ttgagtattcgatttgaaggttaaatcctt |
309 |
Q |
| |
|
|||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||| |||| ||| ||||||||| |
|
|
| T |
29023239 |
tatctttattggaaaaaggttaaactacaagcattttggtggtttaaatcttattatgttgtttttgattttgagtattcagtttggagggtaaatcctt |
29023140 |
T |
|
| Q |
310 |
tattatgttttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtgga-ttgtctcattgcaatttctagatactttaactttct |
408 |
Q |
| |
|
||||||||||| | ||||||| |||||||| ||||||||| ||||||| | ||||| | |||| ||| || |||| || || | ||||||||| |||||| |
|
|
| T |
29023139 |
tattatgttttga-gttgtaatgtaattttgtttttcttggctactttttggtagcttttggatttgccttattgtaaattttggatactttagctttct |
29023041 |
T |
|
| Q |
409 |
ttggtacaccttgtg |
423 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
29023040 |
ttagtacaccttgtg |
29023026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 420
Target Start/End: Complemental strand, 19335131 - 19334954
Alignment:
| Q |
247 |
ttggtggtttaaatcttattatgctgtttttgatt--gagtattcgatttgaaggttaaatcctttattatgttttcaggttgtaacgtaattttatttt |
344 |
Q |
| |
|
||||||| | ||||||||||||| |||||| |||| |||||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
19335131 |
ttggtggctcaaatcttattatgttgttttcgattttgagtattcaatttgaaggttaagtcctttattatgttttcatgttgtaacataattttatttt |
19335032 |
T |
|
| Q |
345 |
--tcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttctttggtacacctt |
420 |
Q |
| |
|
| ||| |||| |||| ||||| |||||||| | |||| ||||| | ||||||||| ||| |||| |||||||| |
|
|
| T |
19335031 |
tatgttggctacattgtggtagcttgtggatttttctattgtaatttttggatactttagcttcttttgctacacctt |
19334954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 338
Target Start/End: Complemental strand, 34152059 - 34151941
Alignment:
| Q |
217 |
tttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgattgagtattcgatttgaaggttaaatcctttattatg |
316 |
Q |
| |
|
||||||||||||||| |||||||| || ||||||||||| |||||||||||| |||||| ||||||||||| |||| ||||||| |||||||||||| |
|
|
| T |
34152059 |
tttattggaaaaggttaaactccaagctttttggtggttcaaatcttattatttggttttttattgagtattcagtttggaggttaagtcctttattatg |
34151960 |
T |
|
| Q |
317 |
ttttcaggttgtaacgtaattt |
338 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
34151959 |
---tcatgttgtaacgtaattt |
34151941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 34152174 - 34152056
Alignment:
| Q |
11 |
tttggcttttaatatctggatggttagacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttcttcaa |
110 |
Q |
| |
|
|||||||||| ||||| || ||||||| ||| |||| ||| |||||||||||||| |||||||| ||||||||| ||| ||||||||| |||||| || | |
|
|
| T |
34152174 |
tttggcttttgatatcgggttggttaggcatttcaacgacccttcaaggttccttatttgagcattttcttcagattggaggtcttgg-ggtttc-tcca |
34152077 |
T |
|
| Q |
111 |
aaaagtctcgtctgactttta |
131 |
Q |
| |
|
| ||||||||| ||||||||| |
|
|
| T |
34152076 |
acaagtctcgtttgactttta |
34152056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 423
Target Start/End: Original strand, 32198474 - 32198504
Alignment:
| Q |
393 |
gatactttaactttctttggtacaccttgtg |
423 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
32198474 |
gatactttaactttctttggtacaccttgtg |
32198504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 39 - 423
Target Start/End: Original strand, 54089541 - 54089925
Alignment:
| Q |
39 |
catctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttcttcaaaaaagtctcgtctgacttttaatattat |
138 |
Q |
| |
|
|||||||| |||||||||| ||| || ||| |||| ||||||||||||| || ||| | ||||||| ||| || |||||| |||||||||||||||| |
|
|
| T |
54089541 |
catctcaacgactcttcaaagttt-ttatttaagcattttcttcagtttggagatctcgaaggtttcaccaacaac-tctcgtttgacttttaatattat |
54089638 |
T |
|
| Q |
139 |
ttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaacttctatctttattggaaaaggtaaaactc |
238 |
Q |
| |
|
||||||| || || |||| || ||||| ||||| |||||||||| |||||| | ||||||| |||| |||||||||||||| ||||||| || ||| |
|
|
| T |
54089639 |
ttggattgaagctctttttactatttgaaaggatcgcaatatgaggcattttcataataaattgaaacagtttctatctttattgaaaaaggttaagctc |
54089738 |
T |
|
| Q |
239 |
cacgcattttggtggtttaaatcttattatgctgtttttgatt--gagtattcgatttgaaggttaaatcctttattatgttttcaggttgtaacgtaat |
336 |
Q |
| |
|
|| ||| ||||| ||||||||||||||| ||||||||| ||| |||||||||||||| ||||||| || ||| ||||||||||| ||||||||||||| |
|
|
| T |
54089739 |
caaacatgttggtagtttaaatcttattacgctgttttttattttgagtattcgatttggaggttaagtcttttgttatgttttcatgttgtaacgtaat |
54089838 |
T |
|
| Q |
337 |
tttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttctttggtacaccttgtg |
423 |
Q |
| |
|
||||||||||||| ||||||||| || | |||| |||||||||||| | ||| | ||| ||||||||| ||||| |||| ||||| |
|
|
| T |
54089839 |
tttatttttcttggctactttgttataacttgtgaattgtctcattgtattttttggattctttaacttcttttggcacactttgtg |
54089925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 221 - 423
Target Start/End: Original strand, 7097401 - 7097600
Alignment:
| Q |
221 |
ttggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttgatt--gagtattcgatttgaaggttaaatcctttattatgtt |
318 |
Q |
| |
|
||||||||| | |||||||| || ||||||||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||| |||||||||||| |
|
|
| T |
7097401 |
ttggaaaagattaaactccaagccttttggtggtttaaatcttattatgctgtttctgatttcgagtattcagtttagaggttaaattctttattatgtt |
7097500 |
T |
|
| Q |
319 |
ttcaggttgtaacgtaattttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttctttggtacacc |
418 |
Q |
| |
|
|| ||||| |||||||||||||||||| ||| |||| |||||||||| || |||| |||| ||||| | ||| ||||||||| ||||| |||||| |
|
|
| T |
7097501 |
ttaaggtt-----gtaattttatttttcttggttacgttgtggtagcatgtgaatcgtcttattgtaatttttggattctttaacttcctttgatacacc |
7097595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 41973262 - 41973372
Alignment:
| Q |
68 |
ttgagcactttcttcagtttgaaggtcttggaggtttcttcaaaaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttgga |
167 |
Q |
| |
|
||||||| ||| ||||||||| |||||||||||| || |||||| ||||||||| |||||||||| || |||||||||||| || |||| | ||||| | |
|
|
| T |
41973262 |
ttgagcattttattcagtttggaggtcttggaggctt-ttcaaacaagtctcgtttgacttttaacataatttggatttaagctctttttattatttgta |
41973360 |
T |
|
| Q |
168 |
aggaccgcaata |
179 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
41973361 |
aggatcgcaata |
41973372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 7097392 - 7097263
Alignment:
| Q |
72 |
gcactttcttcagtttgaaggtcttggaggtttcttcaaaaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaagga |
171 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| || ||||||| | | || |||||||||||| |||| | || ||| || ||||| ||||| |
|
|
| T |
7097392 |
gcactttcttcagtttgaaggtcttgggagttt-ttccaacaagtctcttttagtttataatattatttgaatttcagctcgttttactatttgaaagga |
7097294 |
T |
|
| Q |
172 |
ccgcaatatgatacatttttacaataaatca |
202 |
Q |
| |
|
|| |||||||| |||||||||| |||||||| |
|
|
| T |
7097293 |
ccacaatatgagacatttttacgataaatca |
7097263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 35544587 - 35544904
Alignment:
| Q |
11 |
tttggcttttaatatctggatggttagacatctcaatgactcttcaaggttccttctttgagcactttcttcagtttgaaggtcttggaggtttcttcaa |
110 |
Q |
| |
|
|||| |||| |||||||| ||||||||||||||||| ||||||||| ||||| | |||||||| |||||||| |||| ||||||| ||| || ||| | |
|
|
| T |
35544587 |
tttgactttaaatatctgaatggttagacatctcaacgactcttcagtgttccatatttgagcattttcttcaatttggaggtcttagagatta-ttcca |
35544685 |
T |
|
| Q |
111 |
aaaagtctcgtctgacttttaatattatttggatttaaacttttttaacgatttggaaggaccgcaatatgatacatttttacaataaatcataacaact |
210 |
Q |
| |
|
| | |||||||||||||||||||||||| || |||| |||| ||||||| | |||||||||||| ||||||| ||||||| |||||||||| ||||||| |
|
|
| T |
35544686 |
acatgtctcgtctgacttttaatattatctgaatttcaactcttttaacaacttggaaggaccgaaatatgagacattttcacaataaatcggaacaact |
35544785 |
T |
|
| Q |
211 |
tctatctttattggaaaaggtaaaactccacgcattttggtggtttaaatcttattatgctgtttttga--ttgagtattcgatttgaaggttaaatcct |
308 |
Q |
| |
|
|||| ||||||| |||| || |||||||| ||||||||||||| ||||| |||||||| ||||||| | || ||||||| ||||| ||||||| | || |
|
|
| T |
35544786 |
tctacctttattaaaaaatgttaaactccaagcattttggtggtataaattttattatgttgttttttattttaagtattcaatttggaggttaatttct |
35544885 |
T |
|
| Q |
309 |
ttattatgttttcaggttg |
327 |
Q |
| |
|
||| |||||||| |||||| |
|
|
| T |
35544886 |
ttaatatgtttttaggttg |
35544904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 427
Target Start/End: Original strand, 23236255 - 23236346
Alignment:
| Q |
336 |
ttttatttttcttgactactttgtcgtagcatgtggattgtctcattgcaatttctagatactttaactttctttggtacaccttgtgttag |
427 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||| || | ||| ||||| | ||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
23236255 |
ttttatttttcttggctactttgtggtagcatgtggatcgtgtttttgtaattttttgatcctttagctttctttggtacaccttgtgttag |
23236346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 411
Target Start/End: Original strand, 35544907 - 35544951
Alignment:
| Q |
367 |
tgtggattgtctcattgcaatttctagatactttaactttctttg |
411 |
Q |
| |
|
|||||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
35544907 |
tgtggattttctcattgtaatttttagatactttaactttctttg |
35544951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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