View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20290_high_8 (Length: 273)
Name: NF20290_high_8
Description: NF20290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20290_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 264
Target Start/End: Original strand, 36276732 - 36276981
Alignment:
| Q |
17 |
acaaaccaccactacctaccaataattatatgttatgtaaatacagttcaattattagctgcgtgaaggtttga--tttcttggagcaaaatctcgaata |
114 |
Q |
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| T |
36276732 |
acaaaccaccactacctaccaataattatatgttatgtaaatacaattcaattagtagctgcgtgaaggtttgagatttcttggagcaaaatctcgaata |
36276831 |
T |
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| Q |
115 |
tttcctgtcacttcttcacactatcgtcattaaacatttgaccagaaaaaagtaacatttttattatgtcaaatttattgtcatgcattttctattttgc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36276832 |
tttcctgtcacttcttcacactatcgtcattaaacatttgaccagaaaaaagtaacatttttattatgtcaaatttattgtcatgcattttctattttgc |
36276931 |
T |
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| Q |
215 |
attaggtagctggttttccacttggaacaagaacataaaactagaataat |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
36276932 |
attaggtagctggttttccacttggaacaagaacataaaactagattaat |
36276981 |
T |
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