View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20292_low_11 (Length: 269)
Name: NF20292_low_11
Description: NF20292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20292_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 12 - 254
Target Start/End: Complemental strand, 45424977 - 45424735
Alignment:
| Q |
12 |
atgaatgaattagaatgtaaagaacctgtttggcaagttgagcagtgttgagaacaatgatggtagaagcaccagctttgatggaaaaaataggtccata |
111 |
Q |
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| T |
45424977 |
atgaatgaattagaatgtaaagaacctgtttggcaagttgagcagtgttgagaacaatgatggtagaagcaccagctttgatggaaaaaataggtccata |
45424878 |
T |
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| Q |
112 |
tttgtgagccatctttgtgaatgttttgtgaggtttcttctctttaagttgaagaagatttccaataaatggtaaacctggaaccgctgcacaaaaccag |
211 |
Q |
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| T |
45424877 |
tttgtgagccatctttgtgaatgttttgtgaggtttcttctctttaagttgaagaagatttccaatcaatggtaaacctggaaccgctgcacaaaaccag |
45424778 |
T |
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| Q |
212 |
tttcattaaacaattaattatacaaagaaatgaacatgaatat |
254 |
Q |
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| T |
45424777 |
tttcattaaacaatttattatacaaagaaatgaacatgaatat |
45424735 |
T |
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