View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20295_low_8 (Length: 304)
Name: NF20295_low_8
Description: NF20295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20295_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 288
Target Start/End: Complemental strand, 10964756 - 10964478
Alignment:
| Q |
10 |
aaaatacaatgaagtaacatataatgtgatataatttcttgtnnnnnnnnngtgatataatttaatgcatgtgcaannnnnnnacggtgacagtttatac |
109 |
Q |
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| T |
10964756 |
aaaatacaataaagtaacatataatgtgatataatttcttgtaaaaaaaaagtgatataatttaatggatgtgcaatttttttacggtgacagtttatac |
10964657 |
T |
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| Q |
110 |
agattaatttcacaacatatttttaatctagacaataaaatgtagaatcaaatgagcattttaataatttaattacatattgttttacatagctaggaat |
209 |
Q |
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| T |
10964656 |
atattaatttcaccagatatttttaatctagacaataaaatgtagaatcaaatgagcattttaataatttaattacatattgttttacatagctaagaat |
10964557 |
T |
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| Q |
210 |
tttacattcatctgatgaaatgttggtacatcatttaatgagtataacaaaatcacgtgtttttaactcgttaaataat |
288 |
Q |
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| T |
10964556 |
tttacattcatctgatgaaatgttggtacatcatttaatgagtataacaaaatcacgtgtttttaactcgttaaataat |
10964478 |
T |
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