View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20296_high_22 (Length: 392)

Name: NF20296_high_22
Description: NF20296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20296_high_22
NF20296_high_22
[»] chr6 (5 HSPs)
chr6 (11-378)||(10970689-10971056)
chr6 (216-360)||(13191750-13191894)
chr6 (217-370)||(19992275-19992426)
chr6 (227-327)||(12974513-12974614)
chr6 (262-350)||(5489199-5489283)
[»] chr8 (10 HSPs)
chr8 (215-378)||(23637697-23637858)
chr8 (214-375)||(9893886-9894045)
chr8 (215-378)||(22883012-22883175)
chr8 (214-346)||(24621961-24622093)
chr8 (226-331)||(24622143-24622249)
chr8 (214-350)||(18832053-18832188)
chr8 (215-317)||(20503408-20503510)
chr8 (215-317)||(23637013-23637115)
chr8 (215-317)||(24382048-24382150)
chr8 (224-313)||(17625344-17625433)
[»] scaffold0615 (1 HSPs)
scaffold0615 (214-377)||(4603-4765)
[»] chr4 (6 HSPs)
chr4 (215-353)||(21957377-21957514)
chr4 (216-318)||(6407044-6407147)
chr4 (215-325)||(11774177-11774288)
chr4 (214-350)||(14616041-14616178)
chr4 (215-317)||(13842371-13842474)
chr4 (215-322)||(11251715-11251821)
[»] chr1 (6 HSPs)
chr1 (215-378)||(21416606-21416768)
chr1 (217-317)||(18623936-18624036)
chr1 (214-317)||(21199853-21199957)
chr1 (215-299)||(20406043-20406129)
chr1 (262-312)||(23600852-23600901)
chr1 (268-354)||(30821286-30821367)
[»] scaffold0118 (2 HSPs)
scaffold0118 (224-362)||(17670-17808)
scaffold0118 (214-296)||(15818-15901)
[»] scaffold0068 (2 HSPs)
scaffold0068 (215-378)||(49608-49771)
scaffold0068 (215-378)||(63056-63219)
[»] chr5 (5 HSPs)
chr5 (217-376)||(19266253-19266411)
chr5 (215-317)||(22433460-22433563)
chr5 (239-350)||(39606549-39606656)
chr5 (214-285)||(22910810-22910882)
chr5 (215-284)||(22652737-22652807)
[»] chr3 (10 HSPs)
chr3 (215-317)||(12782325-12782427)
chr3 (215-297)||(16308414-16308496)
chr3 (215-297)||(16307343-16307425)
chr3 (215-312)||(16279748-16279845)
chr3 (213-313)||(8875167-8875268)
chr3 (217-317)||(11834938-11835040)
chr3 (236-317)||(10835873-10835953)
chr3 (272-348)||(15855269-15855338)
chr3 (275-358)||(13437979-13438057)
chr3 (239-295)||(10929173-10929230)
[»] scaffold0213 (1 HSPs)
scaffold0213 (217-317)||(26380-26479)
[»] chr7 (9 HSPs)
chr7 (215-350)||(15815807-15815939)
chr7 (214-313)||(26150596-26150696)
chr7 (213-353)||(20913897-20914034)
chr7 (214-312)||(868238-868337)
chr7 (214-312)||(1229515-1229614)
chr7 (215-313)||(15002924-15003023)
chr7 (225-304)||(26009203-26009283)
chr7 (262-317)||(9129388-9129444)
chr7 (230-286)||(16463766-16463823)
[»] scaffold0112 (1 HSPs)
scaffold0112 (217-366)||(18424-18573)
[»] scaffold0508 (1 HSPs)
scaffold0508 (212-350)||(5377-5512)
[»] scaffold0043 (1 HSPs)
scaffold0043 (215-303)||(15200-15288)
[»] scaffold0064 (1 HSPs)
scaffold0064 (214-350)||(6531-6665)
[»] scaffold0005 (1 HSPs)
scaffold0005 (214-350)||(201199-201336)
[»] scaffold0412 (1 HSPs)
scaffold0412 (216-317)||(1085-1185)
[»] chr2 (10 HSPs)
chr2 (215-353)||(28772212-28772347)
chr2 (215-353)||(30621978-30622113)
chr2 (215-353)||(30624599-30624734)
chr2 (217-317)||(24533883-24533984)
chr2 (215-314)||(30667766-30667866)
chr2 (268-353)||(30665303-30665384)
chr2 (224-317)||(24300841-24300935)
chr2 (272-349)||(19290357-19290431)
chr2 (215-265)||(22574852-22574902)
chr2 (314-344)||(23781527-23781557)
[»] scaffold0018 (1 HSPs)
scaffold0018 (214-360)||(49955-50099)
[»] scaffold0498 (1 HSPs)
scaffold0498 (250-362)||(4762-4874)
[»] scaffold0914 (1 HSPs)
scaffold0914 (215-322)||(623-731)
[»] scaffold0003 (1 HSPs)
scaffold0003 (214-377)||(218343-218506)
[»] scaffold0282 (1 HSPs)
scaffold0282 (262-295)||(21499-21532)


Alignment Details
Target: chr6 (Bit Score: 348; Significance: 0; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 11 - 378
Target Start/End: Original strand, 10970689 - 10971056
Alignment:
Q  11 cacagaagaattggaaaagagagagtagcaaactaaatgagatgatcaaggaccaattgatacatcgactatgaattatatgcaaacacattctttgctc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  10970689 cacagaagaattggaaaagagagagtagcaaactaaatgagatgatcaaggaccaattgatacatcggctatgaattatatgcaaacacattatttgctc 10970788  T
Q  111 cttgaaagaatgatatatggagatcgcattttcatggcaaaaggaccgagtatgattctgataccatcaagaatttgttaggcctacaagctccagttat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10970789 cttgaaagaatgatatatggagatcgcattttcatggcaaaaggaccgagtatgattctgataccatcaagaatttgttaggcctacaagctccagttat 10970888  T
Q  211 acgttgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgca 310  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10970889 acgttgtaacaccctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgca 10970988  T
Q  311 taaataaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaac 378  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10970989 taaataaaaattttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaac 10971056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 360
Target Start/End: Original strand, 13191750 - 13191894
Alignment:
Q  216 gtaacactctaaactctaaaagcgatagattatgctaatgatacg-acatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  13191750 gtaacaccctaaattctaaaagcgataaattatgctaatgatacggacatatcaagaatctagatgttacttcatcaataaatcaccaagcatgcataaa 13191849  T
Q  315 taaattttttctcaaaaacatcgcagtggaataaaaacaacatcac 360  Q
    |||   ||||||| |||||||||||  |||||||||| | ||||||    
T  13191850 taatagttttctc-aaaacatcgcaccggaataaaaatatcatcac 13191894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 370
Target Start/End: Complemental strand, 19992426 - 19992275
Alignment:
Q  217 taacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaata 316  Q
    |||||| ||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||    
T  19992426 taacaccctaaactctaaaagcgataaattacactaatgatacggcatatcaagaatttagatgttacttcttcaataaaacatcaagcatgcgtaaata 19992327  T
Q  317 aattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgttt 370  Q
    |   ||||||| ||||||||||| |  ||  ||||||||||||||| |||||||    
T  19992326 acaattttctc-aaaacatcgca-tcaaaataaaacaacatcacaactgtgttt 19992275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 12974513 - 12974614
Alignment:
Q  227 aactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaataaattttttc 325  Q
    |||||||||||||||| | ||   ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||    
T  12974513 aactctaaaagcgataaactacattaatgatacgagcatatcaagaatctagatgttacttcttcaataaatcaccaagcatgcataaataagatttttc 12974612  T
Q  326 tc 327  Q
    ||    
T  12974613 tc 12974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 350
Target Start/End: Complemental strand, 5489283 - 5489199
Alignment:
Q  262 catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaataaattttttctcaaaaacatcgcagtggaataaaa 350  Q
    ||||| |||||| |||||| ||||||  ||||||||||| ||||||||||||||||   ||||||| ||||||||  ||||||||||||    
T  5489283 catattaagaatctagatgctacttcaccaataaatcacaaaacatgcataaataa---ttttctc-aaaacatcatagtggaataaaa 5489199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 215 - 378
Target Start/End: Original strand, 23637697 - 23637858
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    |||||||| ||||||||||||||||||| || | ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  23637697 tgtaacaccctaaactctaaaagcgataaatcacgctaatgatacaacatatcaagaatctagatgttacttcttcaataaatcaccaagaatgcataaa 23637796  T
Q  315 taaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaac 378  Q
    ||||   |||||| |||||||||||| ||||| ||||||||||||||| | |||||||||||||    
T  23637797 taaa-aatttctc-aaaacatcgcagcggaatgaaaacaacatcacaactatgtttaataaaac 23637858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 214 - 375
Target Start/End: Original strand, 9893886 - 9894045
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    ||||||||| ||||||||||||||||||| |||| ||||| |||||| ||||| |||||| ||||||||||||||||||||| ||||||| |||||||||    
T  9893886 ttgtaacaccctaaactctaaaagcgataaattacgctaaagatacggcatattaagaatctagatgttacttcttcaataagtcaccaagcatgcataa 9893985  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataa 375  Q
    ||||   ||||||| |||||||||||| ||||| |||||| |||||||| ||||| ||||||    
T  9893986 ataacaattttctc-aaaacatcgcagcggaat-aaaacatcatcacaactgtgtataataa 9894045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 215 - 378
Target Start/End: Original strand, 22883012 - 22883175
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacg-acatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||||||||  |||||||||| |||||||||||||    
T  22883012 tgtaacaccctaaactctaaaagcgataaattacgctaatgatacggacatatcaataatttagatgttacttcgccaataaatcatcaaacatgcataa 22883111  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaac 378  Q
    ||||   ||| ||| |||||||||||| |||||||||||| ||| | || |||||||| ||||||    
T  22883112 ataataatttcctc-aaaacatcgcagcggaataaaaacatcattaaaactgtgtttagtaaaac 22883175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 214 - 346
Target Start/End: Original strand, 24621961 - 24622093
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  24621961 ttgtaacaccctaaactctaaaagtgataaattacgctaatgatacaatcatatcaagaatctagatgttacttcttcaataaatcaccaagcatgcata 24622060  T
Q  313 aataaattttttctcaaaaacatcgcagtggaat 346  Q
    || || | ||||||| |||||||||||| |||||    
T  24622061 aaaaactgttttctc-aaaacatcgcagcggaat 24622093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 226 - 331
Target Start/End: Original strand, 24622143 - 24622249
Alignment:
Q  226 aaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaataaatttttt 324  Q
    ||||||||||||||||| |||| ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||   ||||    
T  24622143 aaactctaaaagcgataaattacgctaatgatacgagcatataaagaatctagatgttacttcttcaataaatcaccaaacatgcataaataacagtttt 24622242  T
Q  325 ctcaaaa 331  Q
    |||||||    
T  24622243 ctcaaaa 24622249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 214 - 350
Target Start/End: Complemental strand, 18832188 - 18832053
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    ||||||||| ||||||||||||||||||| |||| | |||| |||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  18832188 ttgtaacaccctaaactctaaaagcgataaattacg-taatcatacgagcatatcaagaatctagatgtcacttcttcaataaatcaccaagcatgcata 18832090  T
Q  313 aataaattttttctcaaaaacatcgcagtggaataaaa 350  Q
    |||||   ||||||| |||||||||||||| |||||||    
T  18832089 aataataattttctc-aaaacatcgcagtgaaataaaa 18832053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 20503510 - 20503408
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    |||||||| ||||||| |||||| |||  |||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  20503510 tgtaacaccctaaactttaaaagtgatcaattacgttaatgatacgacatatcaagaatttagatgttacatcttcaataaatcaccaaacattcataaa 20503411  T
Q  315 taa 317  Q
    |||    
T  20503410 taa 20503408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 23637115 - 23637013
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    |||||||| |||||||||  |||||||| || | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  23637115 tgtaacaccctaaactcttcaagcgataaatcacgctaatgatacgacatatcaagaatctagatgttacttctacaataaatcaccaagcatgcataaa 23637016  T
Q  315 taa 317  Q
    |||    
T  23637015 taa 23637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 24382048 - 24382150
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    |||||||| ||||||||| ||||||||| |||| |||||||||||| ||||| | |||| |||||||||||||||||||||| |||||| ||||||||||    
T  24382048 tgtaacaccctaaactcttaaagcgataaattacgctaatgatacggcatattatgaatctagatgttacttcttcaataaaacaccaagcatgcataaa 24382147  T
Q  315 taa 317  Q
    |||    
T  24382148 taa 24382150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 17625433 - 17625344
Alignment:
Q  224 ctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    ||||||||||||||| ||| ||||   |||||||||  |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  17625433 ctaaactctaaaagcaataaattacagtaatgatacatcatatcaagaatctagatgttacttcgtcaataaatcaccaaacatgcataa 17625344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 214 - 377
Target Start/End: Original strand, 4603 - 4765
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||| |||| || || ||||||    
T  4603 ttgtaacaccctaaactcgaaaagcgataaattacgctaatgatacggcatatcaagaatctagatgttacttcttcaataagtcacaaagcacgcataa 4702  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaa 377  Q
    ||||   || ||||||||| ||||||| |||||| ||||||||||| || ||||||||||||||    
T  4703 ataacaattctctcaaaaa-atcgcagcggaatataaacaacatcaaaactgtgtttaataaaa 4765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 8e-40; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 215 - 353
Target Start/End: Original strand, 21957377 - 21957514
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  21957377 tgtaacaccctaaactctaaaagcgata-attacgctaatgatacgagcatatcaagaatctagatgttacttcttcaataaatcaccaagcatgcataa 21957475  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaaca 353  Q
    ||||   ||||||| |||||||||||| ||||||||||||    
T  21957476 ataataattttctc-aaaacatcgcagcggaataaaaaca 21957514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 6407044 - 6407147
Alignment:
Q  216 gtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||| |||||||||||| |||||||||||||  |||||||||||||| ||||||||||    
T  6407044 gtaacaccctaaactctaaaagcgataaattacgctaatgatacgagcatatcaagaatctagatgttacttcaccaataaatcaccaagcatgcataaa 6407143  T
Q  315 taaa 318  Q
    ||||    
T  6407144 taaa 6407147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 11774177 - 11774288
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| ||||||||||||||||||| |||| || |||||||| | ||||| |||||||||||||||||||||||||||| ||||||| |||||||||    
T  11774177 tgtaacaccctaaactctaaaagcgataaattacgccaatgatacaatcatataaagaatttagatgttacttcttcaataattcaccaagcatgcataa 11774276  T
Q  314 ataaattttttc 325  Q
    |||  |||||||    
T  11774277 atattttttttc 11774288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 350
Target Start/End: Complemental strand, 14616178 - 14616041
Alignment:
Q  214 ttgtaacactctaaactct-aaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaa-taaatcaccaaacatgcat 311  Q
    ||||||||| |||||| || |||||||||| || | ||| ||||||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||    
T  14616178 ttgtaacaccctaaacccttaaaagcgataaatcacgctgatgatacgacatatcaagaatctagatgttacatcttcaattaaaccaccaaacatgcat 14616079  T
Q  312 aaataaattttttctcaaaaacatcgcagtggaataaaa 350  Q
    ||||||    | |||| |||||||||||| |||||||||    
T  14616078 aaataacaactatctc-aaaacatcgcagcggaataaaa 14616041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 13842474 - 13842371
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| ||||||||||||| ||||| |||| |||| |||||| | ||||| | |||||||||||||||||||||||||| |||||||  ||||||||    
T  13842474 tgtaacaccctaaactctaaaaacgataaattacgctattgatacaatcatataaggaatttagatgttacttcttcaataattcaccaagtatgcataa 13842375  T
Q  314 ataa 317  Q
    ||||    
T  13842374 ataa 13842371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 322
Target Start/End: Original strand, 11251715 - 11251821
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| || ||| || ||||||||| || |||| |||||||| | ||||| |||| ||||||| |||| ||||||||||||| | | ||||||||||    
T  11251715 tgtaacaccctgaacccttaaagcgataaatcatgcaaatgatacaatcatataaaga-tttagatattacatcttcaataaatc-caagacatgcataa 11251812  T
Q  314 ataaatttt 322  Q
    |||| ||||    
T  11251813 ataattttt 11251821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 8e-40; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 215 - 378
Target Start/End: Original strand, 21416606 - 21416768
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||  |||||| |||||||| |||||| ||||| ||||||||||    
T  21416606 tgtaacactctaaactctcaaagcgataaattacgctaatgatacgacatatcaagaatcaagatgtcacttcttcgataaattaccaagcatgcataaa 21416705  T
Q  315 taaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaac 378  Q
    |||   ||||||| ||||||||| || ||||||||||||||||||||  |||| | ||||||||    
T  21416706 taacaattttctc-aaaacatcgtagcggaataaaaacaacatcacatctgtgatcaataaaac 21416768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 18624036 - 18623936
Alignment:
Q  217 taacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaata 316  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  18624036 taacaccctaaactcgaaaagcgataaattatgctaatgatacgacatatcaagaatctagatgttacttcgccaataaatcaccaagcatgcataaata 18623937  T
Q  317 a 317  Q
    |    
T  18623936 a 18623936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 21199957 - 21199853
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||| | || || |||||||||||||||||||||||||||| |||||||| |||||||    
T  21199957 ttgtaacaccctaaactctaaaagcgataaattatgctaatgatacaatcacataaagaatttagatgttacttcttcaataattcaccaaagatgcata 21199858  T
Q  313 aataa 317  Q
    |||||    
T  21199857 aataa 21199853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 20406043 - 20406129
Alignment:
Q  215 tgtaacactctaaactctaaaagcgataga-ttatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatca 299  Q
    |||||||| ||||||||||||||||||| | ||| || |||||||| | ||||||||||||||||||||| |||||| |||||||||    
T  20406043 tgtaacaccctaaactctaaaagcgataaaattacgcaaatgatacaatcatatcaagaatttagatgtttcttcttaaataaatca 20406129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 23600852 - 23600901
Alignment:
Q  262 catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  23600852 catataaagaatttagatgttacttcttcaataaatc-ctaaacatgcata 23600901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 354
Target Start/End: Original strand, 30821286 - 30821367
Alignment:
Q  268 aagaatttagatgttacttcttcaataaatcaccaaacatgcataaataaattttttctcaaaaacatcgcagtggaataaaaacaa 354  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||  |||    ||| ||||||||||||||  ||||||| |||||    
T  30821286 aagaatttagatgttacttcttccataaatca-aaaacatgcatacttaa----tttttcaaaaacatcgcaacggaataataacaa 30821367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 362
Target Start/End: Complemental strand, 17808 - 17670
Alignment:
Q  224 ctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaataaatttt 322  Q
    ||||||||||||||||||| |||| || |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||   ||    
T  17808 ctaaactctaaaagcgataaattacgcgaatgatacgagcatatcaagaatctagatgttacttcttcaataaatcaccaagcatgcataaataataatt 17709  T
Q  323 ttctcaaaaacatcgcagtggaataaaaacaacatcacaa 362  Q
    ||||| ||||||||||||  ||||||||||| ||||||||    
T  17708 ttctc-aaaacatcgcagcagaataaaaacatcatcacaa 17670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 296
Target Start/End: Complemental strand, 15901 - 15818
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacg-acatatcaagaatttagatgttacttcttcaataaa 296  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||| || |||||||||||| ||||||    
T  15901 ttgtaacaccctaaactctaaaagcgataaattacgctaatgatacgaacatatcaagaatctatatgttacttctttaataaa 15818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 215 - 378
Target Start/End: Original strand, 49608 - 49771
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||| | |||||||||||| ||||||||||||   |||||||||||||| ||| |||||    
T  49608 tgtaacaccctaaactctaaaagcgataaattacactaatgatacaaacatatcaagaatctagatgttacttggccaataaatcaccaagcatacataa 49707  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaac 378  Q
    ||||   ||||||| |||||||||||  |||||||||||| |||||||| |||||||||||||||    
T  49708 ataataattttctc-aaaacatcgcaacggaataaaaacatcatcacaactgtgtttaataaaac 49771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 215 - 378
Target Start/End: Original strand, 63056 - 63219
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||| | |||||||||||| ||||||||||||   |||||||||||||| ||| |||||    
T  63056 tgtaacaccctaaactctaaaagcgataaattacactaatgatacaaacatatcaagaatctagatgttacttggccaataaatcaccaagcatacataa 63155  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaac 378  Q
    ||||   ||||||| |||||||||||  |||||||||||| |||||||| |||||||||||||||    
T  63156 ataataattttctc-aaaacatcgcaacggaataaaaacatcatcacaactgtgtttaataaaac 63219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 217 - 376
Target Start/End: Original strand, 19266253 - 19266411
Alignment:
Q  217 taacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaata 316  Q
    |||||| ||||||||| ||||||||| |||| |||||| ||||| |||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||    
T  19266253 taacaccctaaactctcaaagcgataaattacgctaattatacggcatatcaagaatctagatgttacttcttcaataactcatcaatcatgcataaata 19266352  T
Q  317 aattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaa 376  Q
    ||   |||||| |||||||| |||  ||||||||||||||| | || |||||||||||||    
T  19266353 aaaactttctc-aaaacatcacagcagaataaaaacaacataataactgtgtttaataaa 19266411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 22433563 - 22433460
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaa-taaatcaccaaacatgcataa 313  Q
    |||||||| ||||||||| ||||||||| |||| |||||||||||| |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||    
T  22433563 tgtaacaccctaaactctcaaagcgataaattacgctaatgatacggcatatcaagaatctagatgttacatcttcaattaaatcacaaaacatgcataa 22433464  T
Q  314 ataa 317  Q
    ||||    
T  22433463 ataa 22433460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 350
Target Start/End: Original strand, 39606549 - 39606656
Alignment:
Q  239 gatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaataaattttttctcaaaaacatcg 337  Q
    |||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| || ||    |||||| |||||||||    
T  39606549 gataaattacgctaatgatacgatcatatcaagaatctagatgttacttcttcaataaatcaccaagcatgcatgaacaa----tttctc-aaaacatcg 39606643  T
Q  338 cagtggaataaaa 350  Q
    ||| |||||||||    
T  39606644 cagcggaataaaa 39606656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 22910810 - 22910882
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacg-acatatcaagaatttagatgttact 285  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||  ||| |||||||| |||||||||||    
T  22910810 ttgtaacaccctaaactctaaaagcgataaattacgctaatgatacgcgcatgtcaagaatctagatgttact 22910882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 22652737 - 22652807
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttac 284  Q
    |||||||| ||||||||||||||||||| |||| |||| |||||| |  |||| |||||||||||||||||    
T  22652737 tgtaacaccctaaactctaaaagcgataaattacgctactgatacaattatataaagaatttagatgttac 22652807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 12782427 - 12782325
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  12782427 tgtaacactctaaactctaaaagcgataatttacgctaatgatacggaatatcaagaatttagatgttacaccttcaataaatcaccaaacatgcataaa 12782328  T
Q  315 taa 317  Q
    |||    
T  12782327 taa 12782325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 16308496 - 16308414
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaat 297  Q
    ||||||||  |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16308496 tgtaacaccataaactctaaaagcgataaattacgctaatgatacgacatatccagaatttagatgttacatcttcaataaat 16308414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 16307425 - 16307343
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaat 297  Q
    ||||||||  |||||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  16307425 tgtaacaccataaactctaaaagcgataaattacgctaatgatacggcatatcgagaatttagatgttacatcttcaataaat 16307343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 16279748 - 16279845
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    ||||||||  |||||||||||||||||| |||| ||||||||||| | ||||| | ||||||||||||||||| |||||||| ||||||||||||||||    
T  16279748 tgtaacaccgtaaactctaaaagcgataaattacgctaatgatacaatcatat-acgaatttagatgttacttattcaataattcaccaaacatgcata 16279845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 8875167 - 8875268
Alignment:
Q  213 gttgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcat 311  Q
    |||||||||| |||||||||||||  |||| ||||  |||||||||||| |||||||||||| |||||||||||||  |||||| ||||||| |||||||    
T  8875167 gttgtaacaccctaaactctaaaaatgataaattacactaatgatacgatcatatcaagaatctagatgttacttcaccaataattcaccaagcatgcat 8875266  T
Q  312 aa 313  Q
    ||    
T  8875267 aa 8875268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 11835040 - 11834938
Alignment:
Q  217 taacactctaaactctaaaagcg-atagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaa 314  Q
    ||||||||||||||||||||||| ||| |||| ||||| ||||||  ||||| | |||| ||| |||||||||||||||||||||| || ||||||||||    
T  11835040 taacactctaaactctaaaagcggataaattacgctaaagatacgtgcatattaggaatctagctgttacttcttcaataaatcactaagcatgcataaa 11834941  T
Q  315 taa 317  Q
    |||    
T  11834940 taa 11834938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 10835953 - 10835873
Alignment:
Q  236 agcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaa-catgcataaataa 317  Q
    ||||||| |||| ||||||||||| | |||  ||||||||||||||||| |||||||||| |||| ||| |||||||||||||    
T  10835953 agcgataaattacgctaatgatacaatata--aagaatttagatgttacctcttcaataattcacaaaagcatgcataaataa 10835873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 15855269 - 15855338
Alignment:
Q  272 atttagatgttacttcttcaataaatcaccaaacatgcataaataaattttttctcaaaaacatcgcagtggaataa 348  Q
    |||||||||||||||||||||||| |  |||||||||||||||||| |||||     |||||||||||| |||||||    
T  15855269 atttagatgttacttcttcaataagt--ccaaacatgcataaataatttttt-----aaaacatcgcagcggaataa 15855338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 358
Target Start/End: Original strand, 13437979 - 13438057
Alignment:
Q  275 tagatgttacttcttcaataaatcaccaaacatgcataaataaattttttctcaaaaacatcgcagtggaataaaaacaacatc 358  Q
    |||||||||| |||||||||| ||||||| || |||||||||| |||||||    ||||||| ||| |||||||||||| ||||    
T  13437979 tagatgttacatcttcaataattcaccaagcacgcataaataa-ttttttc----aaacatcacagcggaataaaaacatcatc 13438057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 10929173 - 10929230
Alignment:
Q  239 gatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataa 295  Q
    |||| |||| ||||||||||| | ||||| |||||||||||||||| |||||||||||    
T  10929173 gataaattacgctaatgatacaatcatataaagaatttagatgttatttcttcaataa 10929230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 217 - 317
Target Start/End: Original strand, 26380 - 26479
Alignment:
Q  217 taacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaata 316  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  26380 taacaccctaaactctaaaaacgataaattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatca-catgcatgcataaata 26478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 350
Target Start/End: Complemental strand, 15815939 - 15815807
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    ||||| || ||||||||||||||| ||| |||| ||||| ||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  15815939 tgtaataccctaaactctaaaagcaataaattacgctaaagatacaatcatataaagaatttagatgttacttcttcaataaatcaccaagcatgcataa 15815840  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaa 350  Q
    |||| |||||||    |||||||||||||||||||||    
T  15815839 ataatttttttc----aaacatcgcagtggaataaaa 15815807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 313
Target Start/End: Complemental strand, 26150696 - 26150596
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacgac-atatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    |||||||||  |||||| ||||||||||| |||| ||||||||||| || |||| ||||||||| |||||||||||||||||||||||||| ||||||||    
T  26150696 ttgtaacaccttaaactttaaaagcgataaattacgctaatgatacaaccatataaagaatttatatgttacttcttcaataaatcaccaagcatgcata 26150597  T
Q  313 a 313  Q
    |    
T  26150596 a 26150596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 353
Target Start/End: Complemental strand, 20914034 - 20913897
Alignment:
Q  213 gttgtaacactctaaactctaaaagcgatagattatgctaatgatacgac-atatcaagaatttagatgttacttcttcaataaatcaccaaacatgcat 311  Q
    |||||||||| |||||||||||||| |||| ||||   ||||||||  || |||| |||||||||||||||||||||||||||| ||||||| |||| ||    
T  20914034 gttgtaacaccctaaactctaaaagtgataaattacagtaatgatataaccatataaagaatttagatgttacttcttcaataattcaccaagcatgtat 20913935  T
Q  312 aaataaattttttctcaaaaacatcgcagtggaataaaaaca 353  Q
    ||||||   |||||||  ||||||||||  ||||||||||||    
T  20913934 aaataa---ttttctc-caaacatcgcaacggaataaaaaca 20913897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 868337 - 868238
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    |||||| || |||||||||||||||||||  ||| || |||||||| | ||||| |||||||||||||||||||||||||||| ||| || |||||||||    
T  868337 ttgtaataccctaaactctaaaagcgataacttacgcaaatgatacaatcatataaagaatttagatgttacttcttcaataattcatcagacatgcata 868238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 1229614 - 1229515
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    |||||| || |||||||||||||||||||  ||| || |||||||| | ||||| |||||||||||||||||||||||||||| ||| || |||||||||    
T  1229614 ttgtaataccctaaactctaaaagcgataacttacgcaaatgatacaatcatataaagaatttagatgttacttcttcaataattcatcagacatgcata 1229515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 15003023 - 15002924
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaa-taaatcaccaaacatgcataa 313  Q
    |||||||| |||||| |||||||||||| |||| |  |||||||| ||||||||| |||||||||||||| ||||||| ||||| ||||| |||||||||    
T  15003023 tgtaacaccctaaacactaaaagcgataaattacgtcaatgatacaacatatcaataatttagatgttacatcttcaattaaattaccaagcatgcataa 15002924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 26009283 - 26009203
Alignment:
Q  225 taaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaa 304  Q
    |||||||||||||||||| |||| | ||||||||| | ||||| ||||||||||||||| |||||||||||| ||||||||    
T  26009283 taaactctaaaagcgataaattacgttaatgatacaatcatataaagaatttagatgttgcttcttcaataattcaccaaa 26009203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 9129444 - 9129388
Alignment:
Q  262 catatcaagaatttagatgttacttcttcaataaatcaccaa-acatgcataaataa 317  Q
    ||||||||||||||| |||||||||||||||||||||| ||| | ||||||||||||    
T  9129444 catatcaagaatttaaatgttacttcttcaataaatcatcaagatatgcataaataa 9129388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 16463823 - 16463766
Alignment:
Q  230 tctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttactt 286  Q
    ||||||||||||| |||| ||||| ||||| | ||||| |||||||||||||||||||    
T  16463823 tctaaaagcgataaattacgctaacgatacaatcatataaagaatttagatgttactt 16463766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 366
Target Start/End: Original strand, 18424 - 18573
Alignment:
Q  217 taacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaat 315  Q
    |||||| |||||| || ||||||||| ||||  |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  18424 taacaccctaaacccttaaagcgataaattaaactaatgatacgatcatatcaagaatttaaatgttacatcttcaataaatcaccaagcatgcataaat 18523  T
Q  316 aaat-tttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgt 366  Q
    || |  ||||||| |||||||||||| ||||| |||||||||| ||||||||    
T  18524 aactaattttctc-aaaacatcgcagcggaat-aaaacaacattacaattgt 18573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 350
Target Start/End: Original strand, 5377 - 5512
Alignment:
Q  212 cgttgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgca 310  Q
    ||||||||||| || ||||||||||| |||| || | ||||||||||  | ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  5377 cgttgtaacaccctgaactctaaaagtgataaatcacgctaatgatataatcatataaagaatttagatgttacttcttcaataaatcaccaagcatgca 5476  T
Q  311 taaataaattttttctcaaaaacatcgcagtggaataaaa 350  Q
    |||||||   ||||||| |||||||| ||| |||||||||    
T  5477 taaataa---ttttctc-aaaacatcacagcggaataaaa 5512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 15288 - 15200
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaa 303  Q
    |||||||| |||||||||| |||||||| ||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  15288 tgtaacaccctaaactctataagcgataaattacactaatgatacggcatatcaagaatttagatgttacatcttcaataaatcaccaa 15200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 350
Target Start/End: Original strand, 6531 - 6665
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    ||||||| | ||||| ||||||||||||| |||| ||||||||||  || |||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  6531 ttgtaactccctaaattctaaaagcgataaattacgctaatgatataacctatccagaatttagatgttacatcttcaataaatcaccaagcatgcataa 6630  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaa 350  Q
     |||    |||||||||| |||||||| |||||||||    
T  6631 -taacaactttctcaaaa-catcgcagcggaataaaa 6665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 350
Target Start/End: Original strand, 201199 - 201336
Alignment:
Q  214 ttgtaacactctaaactct-aaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaa-taaatcaccaaacatgcat 311  Q
    ||||||||| |||||| || |||||||||| || | ||| ||||||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||    
T  201199 ttgtaacaccctaaacccttaaaagcgataaatcacgctgatgatacgacatatcaagaatctagatgttacatcttcaattaaaccaccaaacatgcat 201298  T
Q  312 aaataaattttttctcaaaaacatcgcagtggaataaaa 350  Q
    ||||||    | |||| |||||||||||| |||||||||    
T  201299 aaataacaactatctc-aaaacatcgcagcggaataaaa 201336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 317
Target Start/End: Original strand, 1085 - 1185
Alignment:
Q  216 gtaacactctaaactctaaaagcgatagattatgctaatgatacgacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaat 315  Q
    ||||||| ||| |||||||| | |||| |||| |||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  1085 gtaacaccctagactctaaagg-gataaattacgctaatgaaacggcatatcaagaatttagatgttacatcttcaataaaccaccaagcatgcataaat 1183  T
Q  316 aa 317  Q
    ||    
T  1184 aa 1185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 7e-22; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 353
Target Start/End: Original strand, 28772212 - 28772347
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||  ||||| ||||||||| ||| |||| ||||||||||| | ||||| ||||||||||||| ||||||  || ||| |||||||||||||||||    
T  28772212 tgtaacatcctaaagtctaaaagcaataaattacgctaatgatacaatcatataaagaatttagatgctacttcgccagtaattcaccaaacatgcataa 28772311  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaaca 353  Q
    ||||   ||||||| |||||||||||||||||||| ||||    
T  28772312 ataa---ttttctc-aaaacatcgcagtggaataataaca 28772347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 353
Target Start/End: Complemental strand, 30622113 - 30621978
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||  ||||||||| ||||||||| |||| ||||||||||| | | ||| |||||||||||||||||||||||||||| ||||||| ||| |||||    
T  30622113 tgtaacaacctaaactctgaaagcgataaattacgctaatgatacaatcgtataaagaatttagatgttacttcttcaataattcaccaagcattcataa 30622014  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaaca 353  Q
    | |||   |||||| ||| |||||||| ||||||||||||    
T  30622013 acaaa---tttctc-aaatcatcgcagcggaataaaaaca 30621978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 353
Target Start/End: Complemental strand, 30624734 - 30624599
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||  ||||||||| ||||||||| |||| ||||||||||| | | ||| |||||||||||||||||||||||||||| ||||||| ||| |||||    
T  30624734 tgtaacaacctaaactctgaaagcgataaattacgctaatgatacaatcgtataaagaatttagatgttacttcttcaataattcaccaagcattcataa 30624635  T
Q  314 ataaattttttctcaaaaacatcgcagtggaataaaaaca 353  Q
    | |||   |||||| ||| |||||||| ||||||||||||    
T  30624634 acaaa---tttctc-aaatcatcgcagcggaataaaaaca 30624599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 24533984 - 24533883
Alignment:
Q  217 taacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaat 315  Q
    |||||| ||||||||||||| ||||| |||| |||||||| |  | ||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  24533984 taacacactaaactctaaaaacgataaattacgctaatgacaaaatcatataaagaatttagatgttacttcttgaataattcaccaagcatgcataaat 24533885  T
Q  316 aa 317  Q
    ||    
T  24533884 aa 24533883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 30667866 - 30667766
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| ||||||| ||||||||||| |||| ||||||||||| | | ||| |||||||| ||||||||||||||||||| ||| ||| |||| ||||    
T  30667866 tgtaacaccctaaactttaaaagcgataaattacgctaatgatacaatcgtataaagaatttcgatgttacttcttcaataattcatcaagcatgaataa 30667767  T
Q  314 a 314  Q
    |    
T  30667766 a 30667766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 353
Target Start/End: Complemental strand, 30665384 - 30665303
Alignment:
Q  268 aagaatttagatgttacttcttcaataaatcaccaaacatgcataaataaattttttctcaaaaacatcgcagtggaataaaaaca 353  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||   |||||| ||| |||||||| ||||||||||||    
T  30665384 aagaatttagatgttacttcttcaataattcaccaagcatgcataaacaaa---tttctc-aaatcatcgcagcggaataaaaaca 30665303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 24300841 - 24300935
Alignment:
Q  224 ctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaataa 317  Q
    ||||||||||||||||||| |||| | ||||||||| | |||||  | ||||||||||||||||||||||||| ||| |||  ||||||||||||    
T  24300841 ctaaactctaaaagcgataaattaggttaatgatacaatcatatacaaaatttagatgttacttcttcaataattcatcaacaatgcataaataa 24300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 19290357 - 19290431
Alignment:
Q  272 atttagatgttacttcttcaataaatcaccaaacatgcataaataaattttttctcaaaaacatcgcagtggaataaa 349  Q
    ||||| ||||||||||||| |||| |  | ||||||||||||||||  |||||||| ||||||||||||| |||||||    
T  19290357 atttacatgttacttcttccataattttcaaaacatgcataaataa--tttttctc-aaaacatcgcagtagaataaa 19290431  T

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Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 22574852 - 22574902
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacgacata 265  Q
    |||||||| ||||||||| ||||||||| |||| |||||||||||| ||||    
T  22574852 tgtaacaccctaaactctcaaagcgataaattacgctaatgatacggcata 22574902  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 344
Target Start/End: Complemental strand, 23781557 - 23781527
Alignment:
Q  314 ataaattttttctcaaaaacatcgcagtgga 344  Q
    |||||||||||||||||||||||||||||||    
T  23781557 ataaattttttctcaaaaacatcgcagtgga 23781527  T

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Target: scaffold0018 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 49955 - 50099
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgataga-ttatgctaatgatac-gacatatcaagaatttagatgttacttcttcaataaatcaccaaacatgcat 311  Q
    |||||||||  |||||||||||||||||| | ||| || |||||||| | ||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  49955 ttgtaacaccataaactctaaaagcgataaaattacgcaaatgatacagtcatataaagaatttagatgttacttcttcaataattcaccagacatgcat 50054  T
Q  312 aaataaattttttctcaaaaacatcgcagtggaataaaaacaacatcac 360  Q
     | |||||||| ||   |||||||||||  ||||||| |||| ||||||    
T  50055 -actaaattttctc---aaaacatcgcaacggaataataacatcatcac 50099  T

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Target: scaffold0498 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 362
Target Start/End: Original strand, 4762 - 4874
Alignment:
Q  250 ctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataaataa-attttttctcaaaaacatcgcagtggaata 347  Q
    |||||||||||| |||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |  |||||||  |||| |||||| ||||||    
T  4762 ctaatgatacgaacatatcaaaagtctagatgttaattcgtcaataaatcaccaaacatgcataaataacaaattttctc--aaacttcgcagcggaata 4859  T
Q  348 aaaacaacatcacaa 362  Q
    |||||| ||||||||    
T  4860 aaaacatcatcacaa 4874  T

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Target: scaffold0914 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 322
Target Start/End: Complemental strand, 731 - 623
Alignment:
Q  215 tgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcataa 313  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||| | ||||| ||  |||||||||||||||||||||||  || | || |||||||||    
T  731 tgtaacaccctaaactctaaaagcaataaattacgctaatgatacaatcatataaatcatttagatgttacttcttcaatatttcgctaagcatgcataa 632  T
Q  314 ataaatttt 322  Q
    |||| ||||    
T  631 ataattttt 623  T

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Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 377
Target Start/End: Complemental strand, 218506 - 218343
Alignment:
Q  214 ttgtaacactctaaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaacatgcata 312  Q
    |||||||||  |||||||||||||||||| || |  |||||||||||| ||||| |||||| |||||| || |||  |||||||||| |||  |||||||    
T  218506 ttgtaacaccttaaactctaaaagcgataaatcacactaatgatacgagcatatgaagaatctagatgctatttcgccaataaatcatcaaggatgcata 218407  T
Q  313 aataaattttttctcaaaaacatcgcagtggaataaaaacaacatcacaattgtgtttaataaaa 377  Q
    ||||    ||||||| ||||| | ||||   |||||||| |||||| |||||||||||| |||||    
T  218406 aatagcaattttctc-aaaacttggcagcaaaataaaaataacatctcaattgtgtttagtaaaa 218343  T

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Target: scaffold0282 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Complemental strand, 21532 - 21499
Alignment:
Q  262 catatcaagaatttagatgttacttcttcaataa 295  Q
    ||||| ||||||||||||||||||||||||||||    
T  21532 catataaagaatttagatgttacttcttcaataa 21499  T

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