View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20296_high_55 (Length: 249)
Name: NF20296_high_55
Description: NF20296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20296_high_55 |
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Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 38820187 - 38820396
Alignment:
| Q |
12 |
attattcttctttgataaataaaggaaaggaaaggatgtgtgtgcaaaatatataaagcatattccatattgaattaataatgtacagcaatattttagt |
111 |
Q |
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| T |
38820187 |
attattcttctttgataaataaaggaaaggaaaggatgtgtgtgcaaaatatataaaacatattccatattgaattaataatgtacagcaatattttagt |
38820286 |
T |
|
| Q |
112 |
tattcaacaacatcgaccaccaaacaaacaatatacacgacataaattgtgttacaattcaagtgtctgctcaagcaaatatatcacacacacccacaat |
211 |
Q |
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| T |
38820287 |
tattcaacaacatcgaccaccaaacaaacaatatacacgacataaattgtgttacaattcaagtgtctgctcaagcaaatatatcacacccacccacaat |
38820386 |
T |
|
| Q |
212 |
aacactcgtg |
221 |
Q |
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|||||||||| |
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| T |
38820387 |
aacactcgtg |
38820396 |
T |
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