View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20298_high_11 (Length: 417)

Name: NF20298_high_11
Description: NF20298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20298_high_11
NF20298_high_11
[»] chr1 (50 HSPs)
chr1 (37-304)||(44685327-44685605)
chr1 (35-180)||(66480-66625)
chr1 (66-180)||(22077534-22077648)
chr1 (84-179)||(24132043-24132137)
chr1 (16-181)||(3537589-3537753)
chr1 (15-180)||(26661510-26661675)
chr1 (90-180)||(44290889-44290978)
chr1 (29-180)||(44290460-44290611)
chr1 (90-180)||(3550725-3550814)
chr1 (90-180)||(5320029-5320118)
chr1 (90-180)||(17294582-17294671)
chr1 (90-180)||(24600378-24600467)
chr1 (90-180)||(41142377-41142466)
chr1 (90-180)||(41156996-41157085)
chr1 (29-160)||(22077112-22077243)
chr1 (90-169)||(66151-66230)
chr1 (30-180)||(48588491-48588641)
chr1 (90-180)||(32594780-32594869)
chr1 (31-180)||(34364512-34364661)
chr1 (31-180)||(34364930-34365079)
chr1 (90-180)||(41184489-41184578)
chr1 (107-180)||(3537228-3537300)
chr1 (29-180)||(31767163-31767314)
chr1 (26-180)||(40082412-40082565)
chr1 (97-180)||(41157380-41157462)
chr1 (346-401)||(44685231-44685285)
chr1 (26-175)||(3875330-3875479)
chr1 (35-179)||(5575110-5575252)
chr1 (90-180)||(30630702-30630791)
chr1 (90-180)||(39066264-39066353)
chr1 (90-180)||(50052087-50052176)
chr1 (107-180)||(21378122-21378194)
chr1 (95-180)||(29798204-29798288)
chr1 (35-180)||(22793283-22793429)
chr1 (90-180)||(37556116-37556205)
chr1 (109-180)||(45084387-45084457)
chr1 (65-158)||(4956218-4956311)
chr1 (98-180)||(22077900-22077981)
chr1 (90-180)||(26661962-26662051)
chr1 (29-177)||(14318875-14319023)
chr1 (29-180)||(34649443-34649594)
chr1 (66-180)||(1188627-1188741)
chr1 (37-180)||(9955912-9956057)
chr1 (90-180)||(41759488-41759577)
chr1 (107-180)||(37850681-37850753)
chr1 (29-180)||(11977285-11977436)
chr1 (114-180)||(37555735-37555800)
chr1 (90-180)||(38804419-38804508)
chr1 (102-175)||(5528830-5528902)
chr1 (108-177)||(45839635-45839707)
[»] chr7 (44 HSPs)
chr7 (15-180)||(1085604-1085769)
chr7 (15-180)||(7517585-7517750)
chr7 (29-180)||(30244275-30244426)
chr7 (29-180)||(37533013-37533163)
chr7 (37-180)||(45434641-45434784)
chr7 (90-180)||(16569201-16569290)
chr7 (90-180)||(16596372-16596461)
chr7 (29-180)||(30245082-30245229)
chr7 (90-180)||(8128505-8128594)
chr7 (90-180)||(22566726-22566815)
chr7 (29-180)||(22567041-22567191)
chr7 (96-180)||(28301613-28301696)
chr7 (90-177)||(24177443-24177529)
chr7 (14-180)||(45433246-45433412)
chr7 (90-180)||(7554030-7554119)
chr7 (90-180)||(20599319-20599408)
chr7 (90-179)||(23441-23529)
chr7 (17-177)||(41854643-41854802)
chr7 (90-178)||(11845198-11845285)
chr7 (90-180)||(6054565-6054654)
chr7 (90-180)||(29157570-29157659)
chr7 (26-179)||(34218033-34218186)
chr7 (90-180)||(36939797-36939886)
chr7 (36-180)||(40094783-40094927)
chr7 (95-180)||(41910663-41910747)
chr7 (65-180)||(118339-118454)
chr7 (90-180)||(43241500-43241589)
chr7 (90-170)||(1085312-1085391)
chr7 (29-180)||(30032572-30032723)
chr7 (29-180)||(37533366-37533517)
chr7 (90-177)||(19122740-19122825)
chr7 (117-180)||(30245499-30245561)
chr7 (117-180)||(30255344-30255406)
chr7 (90-180)||(14681515-14681604)
chr7 (114-180)||(30244706-30244771)
chr7 (29-139)||(30253537-30253644)
chr7 (90-180)||(40230355-40230444)
chr7 (90-180)||(47129100-47129189)
chr7 (116-180)||(36109007-36109070)
chr7 (107-173)||(36534865-36534930)
chr7 (90-180)||(36622965-36623054)
chr7 (90-180)||(45754721-45754809)
chr7 (90-179)||(4124152-4124240)
chr7 (50-180)||(24838724-24838855)
[»] chr5 (41 HSPs)
chr5 (15-180)||(18603108-18603273)
chr5 (36-180)||(26074617-26074761)
chr5 (29-180)||(32487399-32487549)
chr5 (15-180)||(1028505-1028670)
chr5 (15-172)||(3295333-3295489)
chr5 (29-180)||(36568571-36568720)
chr5 (29-180)||(36492219-36492370)
chr5 (33-180)||(38427553-38427699)
chr5 (29-180)||(40296317-40296468)
chr5 (90-180)||(299494-299583)
chr5 (90-180)||(6224201-6224290)
chr5 (15-180)||(6500456-6500620)
chr5 (31-180)||(26590914-26591063)
chr5 (79-179)||(9498706-9498806)
chr5 (35-175)||(34753033-34753173)
chr5 (90-179)||(41170640-41170728)
chr5 (29-178)||(11416979-11417128)
chr5 (43-180)||(13415776-13415913)
chr5 (90-180)||(26075226-26075315)
chr5 (15-180)||(27502024-27502189)
chr5 (35-180)||(35150012-35150156)
chr5 (79-180)||(41632787-41632888)
chr5 (36-180)||(26074155-26074299)
chr5 (35-180)||(624201-624346)
chr5 (90-180)||(6500828-6500916)
chr5 (107-180)||(26074323-26074395)
chr5 (29-180)||(15370104-15370255)
chr5 (29-180)||(25327940-25328091)
chr5 (97-172)||(3295086-3295160)
chr5 (26-139)||(15370447-15370561)
chr5 (95-173)||(33747783-33747860)
chr5 (90-180)||(42508617-42508706)
chr5 (29-180)||(623823-623974)
chr5 (97-180)||(31509628-31509710)
chr5 (90-180)||(2411012-2411101)
chr5 (95-180)||(24489275-24489357)
chr5 (90-180)||(26074846-26074935)
chr5 (90-180)||(29549319-29549408)
chr5 (118-180)||(300964-301025)
chr5 (90-180)||(42405660-42405749)
chr5 (139-180)||(12662764-12662805)
[»] chr3 (50 HSPs)
chr3 (15-180)||(15772859-15773024)
chr3 (16-180)||(42342377-42342541)
chr3 (29-179)||(33803254-33803404)
chr3 (26-180)||(43346790-43346944)
chr3 (29-180)||(25739427-25739578)
chr3 (15-180)||(12114550-12114715)
chr3 (90-180)||(21832407-21832496)
chr3 (15-180)||(15773197-15773364)
chr3 (33-176)||(39934961-39935104)
chr3 (90-180)||(22304574-22304663)
chr3 (15-180)||(25755399-25755564)
chr3 (90-180)||(32462964-32463054)
chr3 (90-180)||(35946527-35946616)
chr3 (77-180)||(1634364-1634468)
chr3 (29-180)||(37990641-37990792)
chr3 (29-180)||(37990979-37991130)
chr3 (34-180)||(49336693-49336840)
chr3 (36-166)||(41359774-41359904)
chr3 (15-180)||(29644569-29644734)
chr3 (90-180)||(45901718-45901808)
chr3 (71-180)||(52634681-52634789)
chr3 (29-180)||(29644904-29645055)
chr3 (29-172)||(32589716-32589859)
chr3 (90-180)||(33175725-33175817)
chr3 (26-132)||(42342089-42342196)
chr3 (79-180)||(4823660-4823761)
chr3 (95-177)||(7767383-7767464)
chr3 (90-180)||(39389075-39389164)
chr3 (95-180)||(9240154-9240238)
chr3 (115-180)||(50612541-50612605)
chr3 (115-180)||(54017905-54017969)
chr3 (107-175)||(42584903-42584970)
chr3 (100-180)||(51886566-51886645)
chr3 (116-180)||(53118064-53118127)
chr3 (30-180)||(45395656-45395806)
chr3 (90-180)||(8327909-8327998)
chr3 (114-180)||(31190022-31190087)
chr3 (90-180)||(39336293-39336382)
chr3 (19-180)||(54018190-54018351)
chr3 (90-178)||(3135137-3135224)
chr3 (116-180)||(37726509-37726572)
chr3 (79-133)||(52634991-52635046)
chr3 (146-180)||(12747871-12747905)
chr3 (90-180)||(32462622-32462712)
chr3 (95-180)||(33362362-33362449)
chr3 (118-180)||(36986040-36986101)
chr3 (118-180)||(37011479-37011540)
chr3 (139-180)||(22304251-22304292)
chr3 (107-180)||(39914257-39914329)
chr3 (90-178)||(3384330-3384417)
[»] chr6 (37 HSPs)
chr6 (16-180)||(10074352-10074516)
chr6 (37-180)||(3409264-3409407)
chr6 (29-180)||(29518508-29518659)
chr6 (29-180)||(29518925-29519076)
chr6 (29-180)||(32741184-32741335)
chr6 (31-180)||(2579496-2579645)
chr6 (29-180)||(2377759-2377910)
chr6 (90-178)||(10074055-10074142)
chr6 (61-180)||(32460614-32460733)
chr6 (90-180)||(2378131-2378220)
chr6 (35-180)||(3058231-3058376)
chr6 (90-180)||(14748402-14748491)
chr6 (79-179)||(9062402-9062501)
chr6 (15-180)||(10073604-10073767)
chr6 (90-180)||(10911570-10911660)
chr6 (29-179)||(16454913-16455063)
chr6 (90-180)||(35210209-35210298)
chr6 (16-180)||(16107683-16107847)
chr6 (29-180)||(2579874-2580025)
chr6 (29-180)||(16454580-16454731)
chr6 (37-180)||(26544054-26544197)
chr6 (29-179)||(1127366-1127516)
chr6 (90-180)||(3415463-3415552)
chr6 (90-180)||(6999860-6999949)
chr6 (95-180)||(16108068-16108152)
chr6 (29-180)||(2578445-2578595)
chr6 (90-180)||(593773-593862)
chr6 (43-180)||(1950201-1950338)
chr6 (15-180)||(2578823-2578987)
chr6 (15-179)||(2843560-2843725)
chr6 (29-180)||(3409665-3409816)
chr6 (108-180)||(5832108-5832179)
chr6 (101-180)||(17135144-17135222)
chr6 (90-180)||(1846753-1846842)
chr6 (90-179)||(5958667-5958755)
chr6 (95-180)||(6071137-6071221)
chr6 (90-174)||(12092546-12092629)
[»] chr4 (58 HSPs)
chr4 (29-180)||(36629242-36629393)
chr4 (84-180)||(49076504-49076599)
chr4 (90-180)||(3244513-3244602)
chr4 (90-180)||(41370362-41370451)
chr4 (96-180)||(16888884-16888967)
chr4 (27-180)||(39792858-39793011)
chr4 (90-180)||(2740705-2740794)
chr4 (35-180)||(32941129-32941274)
chr4 (90-180)||(52884892-52884981)
chr4 (90-180)||(55933186-55933275)
chr4 (29-180)||(16889536-16889687)
chr4 (17-180)||(25483341-25483504)
chr4 (30-180)||(3340812-3340962)
chr4 (79-170)||(54108928-54109018)
chr4 (90-180)||(2741076-2741165)
chr4 (90-180)||(4955379-4955468)
chr4 (90-180)||(34646711-34646800)
chr4 (30-179)||(51768061-51768210)
chr4 (90-180)||(52884700-52884789)
chr4 (95-180)||(760194-760278)
chr4 (79-180)||(41707515-41707615)
chr4 (90-178)||(50630817-50630904)
chr4 (29-179)||(1731647-1731797)
chr4 (18-180)||(22183253-22183415)
chr4 (30-180)||(54017596-54017746)
chr4 (90-180)||(49880165-49880254)
chr4 (114-180)||(54741264-54741329)
chr4 (29-173)||(22028369-22028515)
chr4 (29-180)||(39404023-39404174)
chr4 (29-176)||(44620362-44620509)
chr4 (90-170)||(45496820-45496899)
chr4 (113-180)||(10245925-10245991)
chr4 (29-132)||(43827492-43827595)
chr4 (90-180)||(22028023-22028112)
chr4 (65-134)||(31691202-31691272)
chr4 (90-180)||(36572024-36572113)
chr4 (90-180)||(39404403-39404492)
chr4 (90-180)||(49302909-49303000)
chr4 (36-180)||(50002431-50002575)
chr4 (114-175)||(54343087-54343147)
chr4 (95-179)||(20826223-20826306)
chr4 (29-180)||(36608661-36608812)
chr4 (36-170)||(54108551-54108686)
chr4 (67-180)||(3341133-3341246)
chr4 (90-160)||(18932811-18932880)
chr4 (90-176)||(44621011-44621096)
chr4 (107-180)||(44620665-44620737)
chr4 (107-179)||(20825842-20825913)
chr4 (37-180)||(34004593-34004734)
chr4 (90-166)||(54936215-54936290)
chr4 (118-177)||(44620304-44620362)
chr4 (90-180)||(28034234-28034323)
chr4 (35-180)||(49076837-49076981)
chr4 (102-180)||(50459726-50459803)
chr4 (114-172)||(54017788-54017845)
chr4 (115-180)||(3700370-3700434)
chr4 (116-180)||(4390189-4390252)
chr4 (115-179)||(6975543-6975606)
[»] chr2 (51 HSPs)
chr2 (29-180)||(42514654-42514805)
chr2 (48-180)||(28254260-28254390)
chr2 (35-180)||(36005888-36006032)
chr2 (30-179)||(40679632-40679781)
chr2 (90-180)||(41283539-41283628)
chr2 (17-180)||(35580714-35580876)
chr2 (79-180)||(28531366-28531467)
chr2 (35-180)||(36178613-36178758)
chr2 (30-180)||(962603-962753)
chr2 (26-180)||(15880268-15880422)
chr2 (29-180)||(6421390-6421541)
chr2 (29-180)||(37105929-37106080)
chr2 (26-180)||(37106193-37106347)
chr2 (90-180)||(5542689-5542778)
chr2 (90-180)||(14745731-14745820)
chr2 (16-180)||(40733522-40733687)
chr2 (96-180)||(31899496-31899579)
chr2 (95-180)||(16542454-16542538)
chr2 (109-180)||(7598614-7598684)
chr2 (30-174)||(40163375-40163520)
chr2 (79-180)||(5543050-5543151)
chr2 (29-180)||(6712981-6713133)
chr2 (107-180)||(38796299-38796371)
chr2 (90-169)||(28254176-28254254)
chr2 (90-177)||(37895125-37895211)
chr2 (90-180)||(7598233-7598322)
chr2 (90-180)||(12529092-12529181)
chr2 (90-180)||(38796684-38796773)
chr2 (103-180)||(1769897-1769973)
chr2 (90-180)||(31468814-31468899)
chr2 (79-178)||(15511547-15511646)
chr2 (59-174)||(30313189-30313303)
chr2 (95-179)||(37894761-37894844)
chr2 (90-180)||(30323469-30323558)
chr2 (90-180)||(33561515-33561604)
chr2 (90-180)||(33731653-33731742)
chr2 (90-180)||(36178333-36178422)
chr2 (17-169)||(6422126-6422278)
chr2 (90-179)||(14745358-14745446)
chr2 (29-180)||(29676908-29677064)
chr2 (79-167)||(36178223-36178311)
chr2 (107-180)||(37632678-37632750)
chr2 (90-177)||(9231257-9231343)
chr2 (117-180)||(40733888-40733950)
chr2 (17-130)||(3673122-3673236)
chr2 (90-180)||(29874087-29874176)
chr2 (139-180)||(36785675-36785716)
chr2 (97-177)||(29676543-29676622)
chr2 (59-174)||(29873569-29873684)
chr2 (72-179)||(33953816-33953923)
chr2 (122-170)||(42515031-42515078)
[»] chr8 (51 HSPs)
chr8 (15-180)||(3669692-3669857)
chr8 (27-180)||(40518587-40518740)
chr8 (48-180)||(147456-147588)
chr8 (90-178)||(34835216-34835303)
chr8 (26-180)||(3038289-3038443)
chr8 (90-180)||(9608750-9608839)
chr8 (29-180)||(25561817-25561969)
chr8 (90-180)||(41972163-41972252)
chr8 (30-178)||(70277-70425)
chr8 (79-180)||(45121962-45122063)
chr8 (95-180)||(9309360-9309444)
chr8 (29-180)||(8918766-8918917)
chr8 (33-180)||(34834881-34835028)
chr8 (37-180)||(45122067-45122210)
chr8 (90-180)||(43398132-43398224)
chr8 (90-180)||(1013935-1014024)
chr8 (35-180)||(3670065-3670210)
chr8 (31-180)||(30359276-30359425)
chr8 (90-178)||(34835481-34835569)
chr8 (90-178)||(34835747-34835835)
chr8 (90-173)||(5420663-5420745)
chr8 (79-177)||(33113419-33113517)
chr8 (31-180)||(1014249-1014398)
chr8 (24-160)||(45122649-45122785)
chr8 (98-178)||(9482676-9482755)
chr8 (107-178)||(41416252-41416322)
chr8 (114-180)||(18372787-18372852)
chr8 (15-172)||(20870561-20870718)
chr8 (90-180)||(40579570-40579659)
chr8 (99-180)||(4154739-4154819)
chr8 (96-180)||(6876932-6877016)
chr8 (99-180)||(18373004-18373084)
chr8 (35-180)||(30441086-30441235)
chr8 (15-159)||(32305503-32305647)
chr8 (114-177)||(1514003-1514065)
chr8 (37-175)||(18372004-18372142)
chr8 (29-180)||(40518074-40518227)
chr8 (90-160)||(9483251-9483320)
chr8 (114-180)||(18372344-18372409)
chr8 (35-180)||(37544498-37544643)
chr8 (95-180)||(9620745-9620829)
chr8 (118-175)||(25561736-25561792)
chr8 (95-179)||(4154350-4154432)
chr8 (29-123)||(5915928-5916023)
chr8 (17-123)||(6651555-6651662)
chr8 (90-156)||(9609114-9609179)
chr8 (90-180)||(18380081-18380170)
chr8 (79-180)||(30359614-30359715)
chr8 (139-180)||(6731909-6731950)
chr8 (99-180)||(18372676-18372755)
chr8 (139-180)||(45123011-45123052)
[»] scaffold0078 (2 HSPs)
scaffold0078 (95-180)||(5362-5446)
scaffold0078 (96-180)||(4987-5070)
[»] scaffold0702 (2 HSPs)
scaffold0702 (29-180)||(516-667)
scaffold0702 (113-180)||(229-295)
[»] scaffold0734 (2 HSPs)
scaffold0734 (95-180)||(5782-5866)
scaffold0734 (36-180)||(5401-5546)
[»] scaffold0391 (2 HSPs)
scaffold0391 (90-180)||(1170-1259)
scaffold0391 (139-180)||(3097-3138)
[»] scaffold0171 (1 HSPs)
scaffold0171 (90-180)||(17520-17609)
[»] scaffold0027 (1 HSPs)
scaffold0027 (29-180)||(47365-47516)
[»] scaffold0504 (1 HSPs)
scaffold0504 (107-180)||(10192-10264)
[»] scaffold0113 (1 HSPs)
scaffold0113 (146-180)||(39843-39877)


Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 37 - 304
Target Start/End: Complemental strand, 44685605 - 44685327
Alignment:
Q  37 cacattgaggttagaactacccc-acaagagagaaagacgtcgcactgttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44685605 cacatcgaggttagaactacccccacaagagagaaagacgtcacactgttacccaaacattaaggcaatgagtttattggtcctcttacttataaggttt 44685506  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcac-----------acgcgtgttgtgtgtgataggaaaataccacgtatgtacaccaaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||||           || ||| ||||||||||||||||||||| |||||||||||||||||    
T  44685505 tcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacacgt-ttgtgtgtgataggaaaatactacgtatgtacaccaaaa 44685407  T
Q  225 tgaattgtggacatcattgattcaagtatagaagaatacacccaatccacaaaatatttaactaactcaccttcttttgc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44685406 tgaattgtggacatcattgattcaagtatagaagaatacacccaatccacaaaatatttaactaactcaccttcttttgc 44685327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 66480 - 66625
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    |||||||||||| |||||| ||| |||||| |||| |||||    ||| ||||||||| | ||||||| ||  |||||| | ||||||||||||||||||    
T  66480 tccacattgaggctagaacaaccgcacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggt 66579  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||||||||||||||||||| |||||||||||||||    
T  66580 gttcaa-cctttacttttctatccgatatggaacatataactcacac 66625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 22077534 - 22077648
Alignment:
Q  66 gagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgg 164  Q
    |||| ||||| | |||| ||||||||| | ||||||| | |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||     
T  22077534 gagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtga 22077632  T
Q  165 gacatataactcacac 180  Q
    ||||||||||||||||    
T  22077633 gacatataactcacac 22077648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 24132043 - 24132137
Alignment:
Q  84 ttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||||||| |||||||||||||||||| | ||| |||| ||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||    
T  24132043 ttacccaaaccttaaggcaatgagtttatggatccccttatttataaggtgttcaa-cctttacttttctatccgatgagggacatataactcaca 24132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 3537589 - 3537753
Alignment:
Q  16 aggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattg 114  Q
    ||||||| |||| ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||| ||||| |||||| |    
T  3537589 aggggagccagg-ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttatag 3537687  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacg 181  Q
    ||||||||||| ||||||| ||||| |||||||| || |||||||| |||||||||||||| |||||    
T  3537688 gtcctcttactcataaggtgttcaa-cctttactattttatccgatgtgggacatataactaacacg 3537753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 26661510 - 26661675
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||| |||| ||| ||||| |||| || |||| | |||| ||| |||||| |||| ||||  | |||| ||||||||| | ||||||||||||||||||     
T  26661510 gaggagagttagggggaccgtccatatcgaggcttgaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatg 26661609  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||||||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  26661610 ggtcctctcacttataaggtgttc-aacctttactcttttacccgatgtgggacatataactcacac 26661675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 44290889 - 44290978
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  44290889 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataactcacac 44290978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 44290460 - 44290611
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| |||  |||||  ||||||||  |  ||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  44290460 ggaccgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 44290559  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| | ||| |||||||||| || |||||||| |||||||||||||||||||    
T  44290560 taagatgttc-aacctttactattttatccgatgtgggacatataactcacac 44290611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 3550814 - 3550725
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  3550814 aaactttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 3550725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 5320029 - 5320118
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||| ||| |||||||||||||||    
T  5320029 aaaccttaaggctatgagtttatgggtcctctcacttataaggtgttc-aacttttacttttctatccgatgtggaacatataactcacac 5320118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 17294671 - 17294582
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  17294671 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 17294582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 24600378 - 24600467
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||||||||||  || |||||||||||||  | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24600378 aaaccttaagacaatgagtttatgagttctcttacttataatatgttcaa-cctttacttttctatccgatatgggacatataactcacac 24600467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41142466 - 41142377
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||| ||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  41142466 aaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 41142377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41157085 - 41156996
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||||| |||||||||||||| ||||||    
T  41157085 aaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgttatgggacatataattcacac 41156996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 22077112 - 22077243
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| | |||| ||| || ||| |||  ||||||| |||| ||| ||||| | ||| |||||||||||||| ||||||||||||||    
T  22077112 ggaccgtccacatcgaggcttgaacaaccgcataagtgagggagacgtcacactcttatccaaaaccttagggcaatgagtttatgggtcctcttactta 22077211  T
Q  128 taaggttttcaaacctttacttttctatccgat 160  Q
    |||||| ||| ||||||||||||||||||||||    
T  22077212 taaggtattc-aacctttacttttctatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 66151 - 66230
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 169  Q
    |||| ||||||| ||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||| || |||||    
T  66151 aaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacat 66230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 48588491 - 48588641
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||||| ||| ||||||  ||| ||||  |||||| ||||||||| | |||||||||||| ||||  |||| ||||||||||    
T  48588491 gaccgtccacatcgaggctagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttat 48588590  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||| |||||||||| || |||||||| | ||||||| |||||||||    
T  48588591 aaggtgttc-aacctttactattttatccgatgtcggacatagaactcacac 48588641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 32594780 - 32594869
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| | |||||||||||||||||    
T  32594780 aaaccttaagacaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtaggacatataactcacac 32594869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 34364661 - 34364512
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| |||| |||| | ||| || ||| |||| |||| || |||| ||||||||| | ||||||| ||| |||||  | ||||||||||||||    
T  34364661 accatccacatcgaggctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttata 34364562  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  34364561 aggtgttcaa-cctttactattttatccgatgtgagacatataactcacac 34364512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 34365079 - 34364930
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| ||||||||| | ||  || ||| |||| ||||  | |||| ||||||||| | ||||||| ||| |||||| ||||||||||||||||    
T  34365079 accatccacatcgaggttagagcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttata 34364980  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||| |||||||| | || |||||||| || ||||||||||||||||    
T  34364979 aggtgttc-aacctttattattttatccgatgtgtgacatataactcacac 34364930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 41184489 - 41184578
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||||| || ||||||||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttc-aacctttactattttatccgatgtgagacatataactcacac 41184578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 3537228 - 3537300
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 3537300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 31767163 - 31767314
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||  |||||| ||| ||||||  ||| ||||||| |||| ||||||||| | |||||||| |  ||| || ||||||||||||||    
T  31767163 ggaccgtccacatcgagtctagaacaaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttactta 31767262  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| ||| ||||||||| |||||    
T  31767263 taaggtgttc-aacctttactgttttatccgatgtggaacatataacccacac 31767314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 40082565 - 40082412
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    ||||||| |||||||| |||| |||||| | | ||||||  ||| |||   | |||| ||||||||| | |||||||||||| ||||| | |||||||||    
T  40082565 ggaggactatccacatcgaggctagaacaaacgcacaagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttat-gatcctcttac 40082467  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  40082466 ttataaggtgttcaa-cctttactattttatccgatgtaggacatataactcacac 40082412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 41157462 - 41157380
Alignment:
Q  97 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||| ||| |||||||||||||||||||    
T  41157462 aaggcaatgggtttatgggtcctcttacttataaggtgttc-aacttttactcttttatctgatgtgggacatataactcacac 41157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 44685285 - 44685231
Alignment:
Q  346 taattaactgcaaaattacaagtatataataattaatggaaaacctaggagaaagc 401  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  44685285 taattaactacaaaattacaagtatataataatt-atggaaaacctaggagaaagc 44685231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 3875330 - 3875479
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| ||| ||| || |||| ||||  | || | ||||| ||| | ||||||||||| ||||||  ||||||||||    
T  3875330 ggaggaccgtccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttac 3875429  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    ||||||||| | | ||||||||||||| |||||||| || |||||||||||    
T  3875430 ttataaggtgtac-aacctttacttttttatccgatgtgtgacatataact 3875479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 5575252 - 5575110
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||||||| || ||||||||  |||| | |||| ||| ||||| | |||| || |||  ||||| ||||||||||||||||||||    
T  5575252 tccacatcgaggctagaactacctcataagagaga--gacgccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggt 5575155  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
     ||||| |||||||| ||||||||||  |||||||||||| |||||    
T  5575154 gttcaa-cctttactcttctatccgacgtgggacatataattcaca 5575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 30630702 - 30630791
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| |||||| ||| ||||||||||||| | | ||||||||||| |||| |||||||| || ||||||||| ||||||    
T  30630702 aaactttaaggcaatgtgtttatgggttctcttacttataaag-tgtcaaacctttaattttttatccgatgtgagacatataaatcacac 30630791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 39066264 - 39066353
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||||| ||||| |||| ||||| ||||||||| ||||| |||||||||||||||||||| ||| | |||||||||||||    
T  39066264 aaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaa-cctttacttttctatccgatgtggaatatataactcacac 39066353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 50052087 - 50052176
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||  |||  |||||| |||||||||||||||||| | ||||| |||||||| || |||||||| |||||||||||||||||||    
T  50052087 aaactttaagaaaataggtttatgggtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataactcacac 50052176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 21378122 - 21378194
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||| | ||||| |||||||| ||||||||||| |||||||||||||| ||||    
T  21378122 gtttatgggtcctcttacttataagatattcaa-cctttactgttctatccgatctgggacatataactgacac 21378194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 29798288 - 29798204
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || ||||| || | |||||||||||||||||    
T  29798288 ttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatccaatgtaggacatataactcacac 29798204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 22793429 - 22793283
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaa-tgagtttattggtcctcttacttataagg 132  Q
    |||| |||||||  ||||| ||| ||||||  ||| ||||||| |||| |||| |||| |  |||||||| || |||||| | |||||| |||||||| |    
T  22793429 tccatattgaggccagaacaaccacacaagtaagagagacgtcacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaag 22793330  T
Q  133 ttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| ||| ||||||||||| |||| |||||||||||||||||||    
T  22793329 ttttcaa-cctctacttttctatacgatgtgggacatataactcacac 22793283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 37556205 - 37556116
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttact-tttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||| |||||| |||||||||||||||||| | ||||| |||||||| ||| |||||||| |||||||||||||||||||    
T  37556205 aaaccttaaggctatgggtttat-ggtcctcttacttataagatgttcaa-cctttactatttttatccgatgtgggacatataactcacac 37556116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 45084457 - 45084387
Alignment:
Q  109 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||||| ||||| |||||||| || |||||||| ||||| |||||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtgggagatataactcacac 45084387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 4956311 - 4956218
Alignment:
Q  65 agagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccg 158  Q
    ||||| ||||||| |||| ||||| ||| |||||  ||||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||    
T  4956311 agagatagacgtcacacttttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttc-aacctttacttttctatccg 4956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 22077900 - 22077981
Alignment:
Q  98 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||| |||||||||||||||||| | ||| |||||||| ||||||||||||| |   |||||||||||||||    
T  22077900 aggctatgagtttatgggtcctcttacttataagatgttc-aacctttatttttctatccgatttaaaacatataactcacac 22077981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 26661962 - 26662051
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||  |||||| |||| ||| ||||||||||| ||||| |||||||| || |||| ||||||||| |||||||||||||    
T  26661962 aaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaa-cctttactcttttatctgatatgggatatataactcacac 26662051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 14319023 - 14318875
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||||||| |||||| ||| |||||   ||| ||||  | |||| ||||||||| | ||||||||||   ||||| |||| |||||||||    
T  14319023 ggaccgtccacattgaggctagaacaaccgcacaaataagagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttactta 14318924  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||| ||| |||||||||| || |||||||  ||| ||||||||||||    
T  14318923 taaggtgttc-aacctttactattttatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 34649594 - 34649443
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||| ||  ||| ||||| | |||| ||||||||| | |||||||| |  |||||| ||| ||   |||||    
T  34649594 ggaccgtccacatcgaggctagaacaaccacactagcaagagagacgcctcactcttacccaaaaccttaaggcattaggtttatgggttcttgcactta 34649495  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  34649494 taaggtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 34649443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 1188627 - 1188741
Alignment:
Q  66 gagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgg 164  Q
    |||| ||||| | |||| ||||||||| | |||| |||||||||||||  ||| ||| ||||||||  | ||||| |||  |||||||||||||||||||    
T  1188627 gagagagacgccacacttttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaa-cctccacttttctatccgatatgg 1188725  T
Q  165 gacatataactcacac 180  Q
     |||||||||||||||    
T  1188726 aacatataactcacac 1188741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 9956057 - 9955912
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattgg-tcctcttacttataaggtt 134  Q
    ||||| |||| |||| | ||| ||||||  ||| |||| || |||| ||||||||| | ||||||||||  ||||| ||| ||||||||||||||| ||     
T  9956057 cacatcgaggctagagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtg 9955958  T
Q  135 ttcaaacctttacttttct-atccgatatgggacatataactcacac 180  Q
    ||||| ||||||||||| | ||| ||| |||||||||||||||||||    
T  9955957 ttcaa-cctttactttttttatctgatgtgggacatataactcacac 9955912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41759577 - 41759488
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| | || ||||||||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  41759577 aaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaa-cttttactattttatccgatgtgtgacatataactcacac 41759488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 37850681 - 37850753
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||||||||| ||||| ||| |||| || ||| |||| |||||||||||||||||||    
T  37850681 gtttatgggttctcttacttataaggtgttcaa-cctctactgttttatgcgatgtgggacatataactcacac 37850753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 11977436 - 11977285
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| |||  |  ||| |||| || |||| ||||||||| | |||||||| |  ||||||  || ||||||||||    
T  11977436 ggaccgtccacatcgaggctagaacaaccgcacttgcaagagagacatcacactcttacccaaaaccttaaggcattaggtttatgagtgctcttactta 11977337  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| | |||||| || || ||||| |||||||||||||||||||    
T  11977336 taaggtgttcaa-catttactgttttacccgatgtgggacatataactcacac 11977285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 37555800 - 37555735
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| || ||||| |||| ||| || |||||||| |||||| ||||||||||||    
T  37555800 ggtcctcttacttataatgtattcaa-ccttcactattttatccgatgtgggacttataactcacac 37555735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 38804419 - 38804508
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||  ||| |||||| | ||||||||||||||| || ||||| |||||||| || ||| |||| |||||| ||||||||||||    
T  38804419 aaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaa-cctttactcttttattcgatgtgggacgtataactcacac 38804508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 5528830 - 5528902
Alignment:
Q  102 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||||||||  ||||||||| ||||||| | ||||| |||||||| || |||||||| || |||||||||||    
T  5528830 aatgagtttatgagtcctcttatttataagatgttcaa-cctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 45839707 - 45839635
Alignment:
Q  108 tttattggtcctcttacttataaggttttc----aaacctttacttttctatccgatatgggacatataactca 177  Q
    ||||| |||| ||||||||||||||| |||     |||||||| ||||||||||||| ||||||||||||||||    
T  45839707 tttatgggtcttcttacttataaggtgttcgattcaaccttta-ttttctatccgatgtgggacatataactca 45839635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 1085604 - 1085769
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| |||| ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||| ||||||     
T  1085604 gaggggagccagggggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatg 1085703  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| || ||| |||||||||| || |||||||| |||||||||||||||||||    
T  1085704 ggtcctcttacttataaagtgttc-aacctttactattttatccgatgtgggacatataactcacac 1085769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 7517750 - 7517585
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| || | |||||| |||||| |||| |||||| ||| |||||| |||| ||||  | |||| ||||||||| | ||||||||||| ||||||     
T  7517750 gaggggagccaaggggaccacccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatg 7517651  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  7517650 ggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatataactcacac 7517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 30244426 - 30244275
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| |||| | |||| ||| |||||| |||| ||||  | |||| ||||||||| | ||||||||||| ||||||  |||||||||||||    
T  30244426 ggaccatccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttactta 30244327  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  30244326 taaggtcttcaa-cctttactcttttatccgatgtgggacatataactcacac 30244275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 37533013 - 37533163
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| ||||||||||| | | ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||||||||||||||    
T  37533013 ggaccgtccacatcgaggttagaacaagcgcacaagcaagagagacaccacact-ttacccaaaaccttaaggcaatgagtttatgggtcctcttactta 37533111  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || ||||| || |||||||||||||||||||    
T  37533112 taaggtgttc-aacctttactattttatccaatgtgggacatataactcacac 37533163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 45434784 - 45434641
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| |||| |||||| || |||||||  ||| |||| || |||| ||||||||| | |||||||| | ||||||| |||||||||||||||||||| |    
T  45434784 cacatcgaggctagaacaactccacaagtaagagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgt 45434685  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||||| |||||||||||||| ||||    
T  45434684 tcaa-cctttacttttttatccgatgtgggacatataacttacac 45434641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 16569290 - 16569201
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||||||||||    
T  16569290 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtattc-aacctttactgttctatccgatgtgagacatataactcacac 16569201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 16596372 - 16596461
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||||||||||    
T  16596372 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtattc-aacctttactgttctatccgatgtgagacatataactcacac 16596461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 30245229 - 30245082
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| |||| | |||| ||| ||||||||||| |     | |||| ||||||||| | |||||||||||||||||| |||| |||||||||    
T  30245229 ggaccatccacatcgaggcttgaacaaccacacaagagagacac----cacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttactta 30245134  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| ||| |||||||||||||||    
T  30245133 taaggtgttc-aacctttactcttttatccgatgtggaacatataactcacac 30245082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 8128505 - 8128594
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||  ||| |||||| ||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  8128505 aaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaa-cctttatttttctatccgatatgggacatataactcacac 8128594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 22566726 - 22566815
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||| ||||||||    
T  22566726 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatattactcacac 22566815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 22567041 - 22567191
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| ||||   |||| ||||||||||  ||| ||||  | |||| ||||| ||| | |||||||||||||||||| ||||||||||||||    
T  22567041 ggaccatccacatcgaggcccgaacaaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttactta 22567140  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| | |||||||| ||||||||    
T  22567141 taaggtgttc-aacctttactcttttatccgatgt-ggacatattactcacac 22567191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 28301613 - 28301696
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| |||||| |||||||||||||||||||| ||| | | |||||||||||||||||| || ||||||||||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttc-agcttttacttttctatccgatgtgagacatataactcacac 28301696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 24177529 - 24177443
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||||| |||||| ||||| |||||||||||||| ||| | |||||||| || |||||||| ||||||||||||||||    
T  24177529 aaactttaaggcaatgggtttatgggtccgcttacttataaggtgttc-agcctttactcttttatccgatgtgggacatataactca 24177443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 45433412 - 45433246
Alignment:
Q  14 agaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttat 112  Q
    ||||||||| |||| |||||  |||||| |||| |||||| ||||||||||  ||| ||||  | |||| ||||||||| | ||||||||||  ||||||    
T  45433412 agaggggagccagggggaccgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttat 45433313  T
Q  113 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
      || |||||||||||||||| ||||| |||||||| || |||||||| |||  ||||||||||||||    
T  45433312 gagttctcttacttataaggtgttcaa-cctttactcttttatccgatgtggatcatataactcacac 45433246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 7554119 - 7554030
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||| |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  7554119 aaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 7554030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 20599408 - 20599319
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||||||||||  ||||||||| |||||| || || |  ||||||||||| ||||||||||||||||||||||||||||    
T  20599408 aaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttat-cctttacttttttatccgatatgggacatataactcacac 20599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23441 - 23529
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| ||||||||||||||    
T  23441 aaaccttaaggcaataggtttatgggtcctcttacttataaggtgttc-aacctttactattgtatccgatgtggaacatataactcaca 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 41854802 - 41854643
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattgg 115  Q
    ||||||||||| ||||| || ||||||||| |||||| ||| ||||||  ||||||||||| |||| |||||| |||| |||||||| |   ||||| ||    
T  41854802 ggggagtcagggggaccgtctacattgaggctagaacaaccgcacaagtaagaaagacgtcacactcttacccaaaaccttaaggcattatatttatagg 41854703  T
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    || |||| |||||||||| ||| |||||||||| || || | ||| ||||||||||||||||    
T  41854702 tcatcttgcttataaggtgttc-aacctttactctttta-ctgatgtgggacatataactca 41854643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 11845285 - 11845198
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| |||||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||||||||    
T  11845285 aaaccttaaggcaatggatttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 6054654 - 6054565
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| || ||||||||||| ||||    
T  6054654 aaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttc-aacatttactattttatccgatgtgagacatataactaacac 6054565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 29157659 - 29157570
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| |||| ||||||||||||||| ||||| |||||||| || |||||| | |||||||||||||||||||    
T  29157659 aaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaa-cctttactattttatccggtgtgggacatataactcacac 29157570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 34218033 - 34218186
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| | |||| |||  ||||| |||| ||||  | |||| ||||||||| | ||||| ||||| ||||||  ||||||| ||    
T  34218033 ggaggaccgtccacatcgaggcttgaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcac 34218132  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||||||| ||||| | ||||||||| |||||||| || |||||||||||||||    
T  34218133 ttataaggtgttcaa-catttacttttttatccgatgtgagacatataactcaca 34218186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 36939797 - 36939886
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| |||||||||||||||||||| ||| ||| |||||| || ||| |||| |||||||||||||||||||    
T  36939797 aaaccttaaggcaatggatttatgggtcctcttacttataaggtgttc-aacttttactattttatacgatttgggacatataactcacac 36939886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 40094783 - 40094927
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||| | ||| |||||| ||||||||||||||||||||     
T  40094783 ccacatcgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtg 40094882  T
Q  135 ttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||  |||||||||| || ||| |||| || ||||||||||||||||    
T  40094883 tt-gaacctttactcttttattcgatgtgagacatataactcacac 40094927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 41910663 - 41910747
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||||| |||||| |||||||| | ||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  41910663 ttaagccaatgggtttatgggtcctctcagttataaggtattcaa-cctttactcttttatccgatgtgggacatataactcacac 41910747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 180
Target Start/End: Original strand, 118339 - 118454
Alignment:
Q  65 agagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatg 163  Q
    ||||| ||||| | |||| ||||||||| | ||| || |||| |||||| | ||||||||||||| |||| ||||| |||||||||||||||| ||| ||    
T  118339 agagatagacgccacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaa-cctttacttttctatctgatgtg 118437  T
Q  164 ggacatataactcacac 180  Q
    |||||||||||| ||||    
T  118438 ggacatataacttacac 118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 43241589 - 43241500
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||| |||||||  ||||| ||||||||||||| ||||| |||||| |||| |||||||| ||| |||||||||||||||    
T  43241589 aaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaa-cctttatttttttatccgatgtggaacatataactcacac 43241500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 1085312 - 1085391
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||| |||||||||||||||||| ||| ||||||||||| || | ||| ||| |||||| || ||||||||||||||||||    
T  1085312 aaaccttaaggcaatgagtttatgggttctcttacttatgagttgttc-aacttttactattttatccgatatgggacata 1085391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 30032723 - 30032572
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||| ||| |||| ||||||||| | ||||||| ||  |||||| | | ||||||||||    
T  30032723 ggaccgtccacatcgaggatagaacaaccgcacaagcaagagagatgtcacactcttacccaaaaccttaaggctataggtttatggatactcttactta 30032624  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||  ||| ||| || ||| |||| |||||||||||||||||||    
T  30032623 taaggtgttcaacactt-actcttttattcgatgtgggacatataactcacac 30032572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 37533366 - 37533517
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  | | ||||  | |||| ||||||||| | |||||||||||  ||||| ||||||||||||||    
T  37533366 ggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttactta 37533465  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || ||| | || | | |||||||||||||||    
T  37533466 taaggtgttc-aacctttactattttattcaatgtagaacatataactcacac 37533517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 19122825 - 19122740
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| |||||||||||  |||||  ||||||||||||||||||| ||| |||||||||| || |||||||| | ||||||||||||||    
T  19122825 aaaccttaaggcaatggatttatgagtcctcttacttataaggtgttc-aacctttactattttatccgatgt-ggacatataactca 19122740  T

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Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 30245561 - 30245499
Alignment:
Q  117 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||    
T  30245561 cctcttacttataaggtgttcaa-cctttactcttttatctgatgtgggacatataactcacac 30245499  T

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Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 30255406 - 30255344
Alignment:
Q  117 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||| |||||    
T  30255406 cctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataacgcacac 30255344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 14681604 - 14681515
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||| |||||| || ||||||||||| ||||| ||||| |||||||| || |||| ||| |||||||||||||| ||||    
T  14681604 aaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaa-cctttactattttatctgatgtgggacatataacttacac 14681515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 30244771 - 30244706
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| ||||||||| ||||| |||||||| || ||||| || |||||||||||||||||||    
T  30244771 ggtcctcttatttataaggtgttcaa-cctttactcttttatccaatgtgggacatataactcacac 30244706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 30253644 - 30253537
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| |||| | |||| ||| ||||||||||| |     | |||| ||||||||| | |||||||||||||||||| ||| ||||||||||    
T  30253644 ggaccatccacatcgaggcttgaacaaccacacaagagagacac----cacactcttacccaaaaccttaaggcaatgagtttatgggttctcttactta 30253549  T
Q  128 taaggttttcaa 139  Q
    |||||| |||||    
T  30253548 taaggtcttcaa 30253537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 40230355 - 40230444
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| | ||| |||||| |||||||||||||||||| | ||| ||| ||||||||| ||| |||| |||||||||||||| ||||    
T  40230355 aaaccttaagactatgggtttatgggtcctcttacttataagatgttc-aacttttacttttttattcgatgtgggacatataacttacac 40230444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 47129189 - 47129100
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| || ||| |||||| ||||||||||||||||||   ||||| |||||||| || |||||||| || ||||||||||||||||    
T  47129189 aaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaa-cctttactattttatccgatgtgagacatataactcacac 47129100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 36109007 - 36109070
Alignment:
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| ||||| |||||||| || |||||||| || || |||||||||||||    
T  36109007 tcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgagaaatataactcacac 36109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 36534865 - 36534930
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 173  Q
    |||||| |||||||||||||||||||| ||| ||||| |||| || |||||||  ||||||||||||    
T  36534865 gtttatgggtcctcttacttataaggtgttc-aacctctactgttttatccgaggtgggacatataa 36534930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 36623054 - 36622965
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| | ||||| |||||||||  | ||  |||||||||| || |||||||| |||||||||||||||||||    
T  36623054 aaaccttaaggcaatggatttatggatcctcctacttataaaatgtt-taacctttactattttatccgatgtgggacatataactcacac 36622965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 45754809 - 45754721
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||| ||||||  ||| ||||||||||||||| ||| ||| |||||| || |||||||| | |||||||||||||||||    
T  45754809 aaaccttaaggctatgggtttatgagtcatcttacttataaggtgttc-aacatttactattttatccgatgt-ggacatataactcacac 45754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 4124152 - 4124240
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| |||| |||||||||||||||||||||| |||||||| | | ||||||||  | ||||||| ||||| | |||||| ||| |||||    
T  4124152 aaaccttaatgcaatgagtttattggtcctctcacttataaag-tgtcaaacctcaaattttctaaccgatgtaggacatgtaattcaca 4124240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 24838724 - 24838855
Alignment:
Q  50 gaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcct-cttacttataaggttttcaaacctttac 147  Q
    |||| ||| ||||||  ||| ||||||| |||| ||||||||| | ||||| ||| | |||||| | |||| |||||||||||||| ||||| |||||||    
T  24838724 gaacaaccacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaa-cctttac 24838822  T
Q  148 ttttctatccgatatgggacatataactcacac 180  Q
    | || ||| |||| || ||||||||||| ||||    
T  24838823 tcttttattcgatgtgagacatataacttacac 24838855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 18603108 - 18603273
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| |||||| ||| ||||||| |||| |||||||||| ||||||  ||| ||| | | |||| ||||||||| | ||||||||||| ||||||     
T  18603108 gaggggagccaggagaaccgtccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatg 18603207  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  18603208 ggtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 18603273  T

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Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 26074761 - 26074617
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| ||||||||| | ||| ||| || |||| ||||  | |||| ||||||||| | ||||||||||| |||||| ||||||||||||||||||||     
T  26074761 ccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtg 26074662  T
Q  135 ttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| |||||||||| || |||||||||||| |||||||||||||||    
T  26074661 ttc-aacctttactcttttatccgatatggaacatataactcacac 26074617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 32487549 - 32487399
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| |||| |||||| ||| || |||  ||| | ||||| |||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  32487549 ggaccatccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 32487450  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || ||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  32487449 ta-ggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 32487399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 1028505 - 1028670
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    ||||||||  ||| ||||| ||||||| |||| |||||| ||| |||||| |||| ||||| | |||| ||||| ||| | ||||||  ||  ||||||     
T  1028505 gaggggagctagggggaccgtccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatg 1028604  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| || ||||  |||||||||||||||||||| |||||||||||||||||||    
T  1028605 ggtcctcttacttataaagtgttcat-cctttacttttctatccgatgtgggacatataactcacac 1028670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 3295333 - 3295489
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaactttaaggcaatgagtttattg 114  Q
    ||||||||| ||| ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||| |||| ||||||||||  |||||| |    
T  3295333 gaggggagtgagggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaacacactcttaccaaaaccttaaggcaattggtttatgg 3295432  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||    
T  3295433 gtcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatata 3295489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 36568571 - 36568720
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| |||||||||||  |||| | |||| ||||| ||| | ||||||||||| |||||  |||| ||| |||||    
T  36568571 ggaccttccacatcgaggatagaacaaccacacaagagaga--gacgccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcactta 36568668  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| | |||||||||||||||||| |||||||||||||||||||    
T  36568669 taaggtgttcaa-cttttacttttctatccgatgtgggacatataactcacac 36568720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 36492219 - 36492370
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||| ||||| | | |||| |||| |||||||||||||||||||||    
T  36492219 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttactta 36492318  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  36492319 taaggtgttc-aacctttactcttttatccgatgtgggacatataactcacac 36492370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 38427699 - 38427553
Alignment:
Q  33 catccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataag 131  Q
    ||||||||| ||||||||||| ||| |||||| |||| ||||||| |||| |||| |||| | ||||| |||||  || || |||||||| |||||||||    
T  38427699 catccacatcgaggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctct-acttataag 38427601  T
Q  132 gttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     | ||||| ||||||||||||||||| || |||||||||||||||||||    
T  38427600 atgttcaa-cctttacttttctatccaatgtgggacatataactcacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 40296317 - 40296468
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | | ||||||||| |||||| ||||||||||||||    
T  40296317 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttactta 40296416  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| ||||||| || || |||||||| |||||||||||||||||||    
T  40296417 taaggtgttc-aaccttttctattttatccgatgtgggacatataactcacac 40296468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 299583 - 299494
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||| |||| ||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  299583 aaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 299494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 6224290 - 6224201
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| || |||||||  |||||||||||||||||||    
T  6224290 aaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgaagtgggacatataactcacac 6224201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 6500620 - 6500456
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| | || ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||      
T  6500620 gaggggagcctgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaa 6500521  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| | |||||||||||||||||    
T  6500520 ggtcctcttacttataaggtgttc-aacctttactattttatccgatgt-ggacatataactcacac 6500456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 26590914 - 26591063
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| ||||||||||| ||| ||| || |||| ||||| | |||| |||| |||| | |||||||| ||| ||||| | ||||||||||||||    
T  26590914 accatccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttata 26591013  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||| |||||||||||||| || |||||||| |||| ||| ||||||    
T  26591014 aggtgttc-aacctttacttttcgattcgatatggaacatttaaatcacac 26591063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 9498706 - 9498806
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||| ||| || |||||||||||||    
T  9498706 cactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattctatctgatgtgagacatataactca 9498804  T
Q  178 ca 179  Q
    ||    
T  9498805 ca 9498806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 175
Target Start/End: Original strand, 34753033 - 34753173
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||  |||||| |||| |||||||||||||||    
T  34753033 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggt 34753132  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataact 175  Q
     ||| ||| ||||||||||||||| || ||||||||||||||    
T  34753133 gttc-aacttttacttttctatccaatgtgggacatataact 34753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 41170728 - 41170640
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| ||||||||||| |||||| |||||||||||||||||| | ||| |||||||||| || |||||||| ||||||||||||||||||    
T  41170728 aaaccttaaggcaatgggtttatgggtcctcttacttataagatgttc-aacctttactattttatccgatgtgggacatataactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 11416979 - 11417128
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| || | |||||| | ||||||||  ||| |||  || |||| |||| |||| | ||||||||||| |||||| | ||||||||||||    
T  11416979 ggaccatccacatcgaagctagaacaatcccacaagcaagagagagatcacactcttacacaaaaccttaaggcaatgggtttatggatcctcttactta 11417078  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||||| ||| |||||||||| || |||||||| ||| |||||||||||||    
T  11417079 taaggtgttc-aacctttactattttatccgatgtggaacatataactcac 11417128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 13415776 - 13415913
Alignment:
Q  43 gaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaac 141  Q
    |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | |||||| |||  |||||| |||||||||||||||||||| ||| |||    
T  13415776 gaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttc-aac 13415874  T
Q  142 ctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||  | |||||||| |||||||||||||||||||    
T  13415875 ctttactaatttatccgatgtgggacatataactcacac 13415913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 26075226 - 26075315
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||| ||||||    
T  26075226 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgagacatataaatcacac 26075315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 27502024 - 27502189
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttatt 113  Q
    ||||||||  ||| ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||| ||| | ||||||||||  ||||||     
T  27502024 gaggggagctagggggaccgtccacatcgaggatagaacaaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatg 27502123  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||  |||||||||| || ||||| || |||||||||||||||||||    
T  27502124 ggtcctcttacttataaggtgtt-taacctttactattttatccaatgtgggacatataactcacac 27502189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 35150156 - 35150012
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||||||||||||||| ||| ||| || |||| ||||  | |||| ||||||||| | ||||| |||||  ||||| |||| |||||||||||||||    
T  35150156 tccacattgaggttagaacaaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggtc-tcttacttataaggt 35150058  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||| ||| || |||||||| |||||||||||||||||||    
T  35150057 gttcaa-ccttgactcttttatccgatgtgggacatataactcacac 35150012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 41632888 - 41632787
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | |||| ||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| |    
T  41632888 cactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataactta 41632790  T
Q  178 cac 180  Q
    |||    
T  41632789 cac 41632787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 26074155 - 26074299
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| ||||||||| | ||| ||| || |||| ||||  | |||| ||||||||| | ||||||||||| ||| || ||||||||||| ||| ||||     
T  26074155 ccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtg 26074254  T
Q  135 ttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||||||||||| |||||||| || ||||||||||||||||    
T  26074255 ttcaa-cctttacttttttatccgatgtgtgacatataactcacac 26074299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 624346 - 624201
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| |||||||||| |||| ||||  | |||| ||||||||| | | ||||| ||| |||||| |||| |||||||||||| ||    
T  624346 tccacatcgaggctagaacaaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgt 624247  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || ||| | || |||||||||||||||||||    
T  624246 gttcaa-cctttactattttatacaatgtgggacatataactcacac 624201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 6500916 - 6500828
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||| |||||| ||| ||||||||| ||| |||||||||| || |||||||| | |||||||||||||||||    
T  6500916 aaaccttaaggcaatgagtttatgggtccttttatttataaggtgttc-aacctttactattttatccgatgt-ggacatataactcacac 6500828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 26074395 - 26074323
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||||| ||||| | |||| ||||||||| ||| |||||||||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatc-tttagttttctatctgatgtgggacatataactcacac 26074323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 15370255 - 15370104
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| | ||||||||  ||| ||||  | |||| ||||||||| | |||||||  ||  ||||| ||||||||||||||    
T  15370255 ggaccgtccacatcgaggctagaacaatcccacaagcaagagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttactta 15370156  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| | ||||| |||||||| || ||| |||| |||||||||||||||||||    
T  15370155 taagatgttcaa-cctttactattttattcgatgtgggacatataactcacac 15370104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 25328091 - 25327940
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||||||| |||||| ||| |||  |  ||| ||||  | |||| ||||||||| | |||||||| |  |||||| ||||||||||||||    
T  25328091 ggaccgtccacattgaggctagaacaaccacacttgcaagagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttactta 25327992  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| ||| |||||| || |||||||| | |||||||||||||||||    
T  25327991 taaggtgttc-aacttttactgttttatccgatgtaggacatataactcacac 25327940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 3295086 - 3295160
Alignment:
Q  97 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    ||||||||| |||||| |||| ||||||||||||||| ||| |||||||||| || |||||||| |||||||||||    
T  3295086 aaggcaatgggtttatgggtcttcttacttataaggtgttc-aacctttactattttatccgatgtgggacatata 3295160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 15370561 - 15370447
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| |||||||||   ||| ||||| | |||| |||| |||| | ||||||| ||| |||||| |||||||||||    
T  15370561 ggaggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccacactcttacgcaaaaccttaaggctatgggtttatgggtcctcttac 15370462  T
Q  125 ttataaggttttcaa 139  Q
    ||||||||| |||||    
T  15370461 ttataaggtgttcaa 15370447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 33747860 - 33747783
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 173  Q
    |||||||||||||||||| | ||||||||||||||| || ||  |||||||||| || |||||||| ||||||||||||    
T  33747860 ttaaggcaatgagtttatggatcctcttacttataaagtatt-taacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 42508706 - 42508617
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| ||||||  |||||||||||||| || | || || |||||||||||||||||||| ||||| |||||| ||||||    
T  42508706 aaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaa-cctttacttttctatccgatgtgggatatataattcacac 42508617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 623974 - 623823
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| || ||||||||| |||||| |||||||||| |||| ||||  | |||| |||| |||| | ||||||| || ||||||| | ||  |||||||     
T  623974 ggaccgtctacattgaggctagaacaaccccacaagtgagagagacaccacactcttactcaaaaccttaaggctataagtttatggctcaacttacttg 623875  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||||| |||||||| || |||||||| || ||||||||||||||||    
T  623874 taaagtgttcaa-cctttactattatatccgatgtgagacatataactcacac 623823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 31509710 - 31509628
Alignment:
Q  97 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||  ||||||| |||||||| ||  |||| |||  ||||||||||||||| || ||||||||||||||||    
T  31509710 aaggcaatgagtttatgagtcctctcacttataaagtgctcaa-cctccacttttctatccgatgtgagacatataactcacac 31509628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 2411101 - 2411012
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||| ||||||| ||| |||||||||| ||| | ||||| | ||||||| ||||||| || | |||||||||||||||||    
T  2411101 aaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaa-cttttacttctctatccaatgtaggacatataactcacac 2411012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 24489275 - 24489357
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| |||||| |||  ||||||| ||||||| || || ||||| |||||||||| ||| |||||||||||||||||||    
T  24489275 ttaaggcaatgggtttatgggt--tcttactaataaggtgtttaa-ccttttcttttctatctgatgtgggacatataactcacac 24489357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 26074846 - 26074935
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||  |||||| ||||||| ||||||||  || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  26074846 aaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 26074935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 29549319 - 29549408
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||| |||| |||||| |||| ||||||||||| ||| ||||  |||||||| || |||| ||||||| |||||||||||||||    
T  29549319 aaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcat-cctttactattttatctgatatggaacatataactcacac 29549408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 301025 - 300964
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| ||||| |||||||| || |||| ||| ||||||||||||| |||||    
T  301025 ctcttacttataaggtattcaa-cctttactgttttatctgatgtgggacatataacccacac 300964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 42405660 - 42405749
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| |  ||||||  ||||| |||||| |||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  42405660 aaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaa-cctttactattttatccgatgttggacatataactcacac 42405749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 12662764 - 12662805
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  12662764 aacctttactattttatccgatgtgggacatataactcacac 12662805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 15773024 - 15772859
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||||||  |||||| ||||||| ||||||||||| ||| ||||||  ||| ||||  | |||| ||| ||||| | |||| |||||||||||||     
T  15773024 gaggggagtcaaaaggaccgtccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatg 15772925  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| ||| |||||| || ||||||||||||||||||||||||||||    
T  15772924 ggtcctcttacttataaggtgttc-aacatttactcttttatccgatatgggacatataactcacac 15772859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 42342377 - 42342541
Alignment:
Q  16 aggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattg 114  Q
    ||||||| |||| ||||| |||||||||||| |||||| ||| ||||||  ||| ||||||| |||| |||||| |||| ||||| |||||  ||||| |    
T  42342377 aggggagccagggggaccgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgg 42342476  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||  |||||||||| || |||| ||| |||||||||||||||||||    
T  42342477 gtcctcttacttataaggtgtt-gaacctttactcttttatcggatgtgggacatataactcacac 42342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 33803254 - 33803404
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaa-actttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||||||  ||||| | |||| |||||||| || |||| |||||| |||||| ||||||||||||||    
T  33803254 ggaccgtccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttactta 33803353  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    || ||| ||||| |||||||| || |||||||| ||||||||||||||||||    
T  33803354 tatggtgttcaa-cctttactattttatccgatgtgggacatataactcaca 33803404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 43346790 - 43346944
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||| |||||||    
T  43346790 ggaggaccgtccacatagaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttac 43346889  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  43346890 ttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 43346944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 25739427 - 25739578
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||||||| ||||||  ||| ||||||| |||| ||||||||| | | || ||||||||||||| ||||||||||||||    
T  25739427 ggaccgtccacatcgaggctagaactaccgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttactta 25739526  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || | | ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  25739527 tatgatgttc-aacttttactattttatccgatgtgggacatataactcacac 25739578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 12114550 - 12114715
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||||| || |||||  |||||| | || |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||| ||||| ||||||     
T  12114550 gaggggagtctgggggaccgaccacatcgtggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatg 12114649  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||||| ||||    
T  12114650 ggtcctcttacttataaggtgttc-aacctttacttttctatccgatgtgggatatataacttacac 12114715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 21832407 - 21832496
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||    
T  21832407 aaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaa-cctttacttttctatccaatgtgggacatataactcacac 21832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 15773364 - 15773197
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaaga--cgtcgcactgttacccaaa-ctttaaggcaatgagttta 111  Q
    ||||||||| ||||||| | ||||||| ||||||||||| ||| ||||||  || ||||  | || |||| ||||||||| ||||||||||||||| |||    
T  15773364 gaggggagttaggaggatcgtccacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaaggcaatgagctta 15773265  T
Q  112 ttggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |  ||||||||||||||||| | ||| ||| |||||| || ||| |||| |||||||||||||||||||    
T  15773264 tgagtcctcttacttataagatgttc-aacttttactcttttattcgatgtgggacatataactcacac 15773197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 39934961 - 39935104
Alignment:
Q  33 catccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataag 131  Q
    ||||||||| |||| |||||| ||| ||||||  ||| |||| || |||| |||| |||| ||||||||||||| |||||| | ||||||||||||||||    
T  39934961 catccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataag 39935060  T
Q  132 gttttcaaacctttacttttctatccgatatgggacatataactc 176  Q
    || ||| |||||||||| || |||||||| | |||||||||||||    
T  39935061 gtgttc-aacctttactcttttatccgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 22304663 - 22304574
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||| |||||||    
T  22304663 aaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattc-aacctttactattttatccgatgtgggacatatagctcacac 22304574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 25755564 - 25755399
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccca-aactttaaggcaatgagtttatt 113  Q
    |||||||||  || ||||||||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||| ||||||| | |||||  |||||     
T  25755564 gaggggagttcgggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacgccacacttttacccacaactttaggacaatggatttatg 25755465  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||||||||||||||||| ||| |||||||||| || |||| ||| || ||||||||||||||||    
T  25755464 agtcctcttacttataaggtattc-aacctttactcttttatctgatgtgagacatataactcacac 25755399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 32462964 - 32463054
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| ||||||  ||| ||||||||||||||| ||||| | |||||| ||||||||||| |||||||||||||||||||    
T  32462964 aaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactcacac 32463054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 35946616 - 35946527
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||| | |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  35946616 aaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 35946527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 1634364 - 1634468
Alignment:
Q  77 cgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||| ||||||||| | ||||| ||||| |||||| ||||||||||||||||| || || || | |||| ||||||||||||| ||||||||||||||    
T  1634364 cgcactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataact 1634463  T
Q  176 cacac 180  Q
    |||||    
T  1634464 cacac 1634468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 37990641 - 37990792
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| | | ||||||  ||| ||||  | |||| ||||||||| | ||||||||||||||||||  |||||||||||||    
T  37990641 ggaccgtccacatcgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttactta 37990740  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  37990741 taaggtgttc-aacatttactattttatccgatgtggaacatataactcacac 37990792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 37990979 - 37991130
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| || |||  ||| ||||  | |||| ||||||||| | ||||||| |||||||||| ||||||||||||||    
T  37990979 ggaccgtccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttactta 37991078  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || ||||| || || ||||||||||||||||    
T  37991079 taaggtgttc-aacctttactattttatccaatgtgagacatataactcacac 37991130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 49336693 - 49336840
Alignment:
Q  34 atccacattgaggttagaactaccccacaagaga-gaaagacgtcgcactgttaccca-aactttaaggcaatgagtttattggtcctcttacttataag 131  Q
    ||||||||||||| |||||| ||| ||||| | | || ||||  | |||| ||||||| ||||||||| | ||| |||||| ||||||||||||||||||    
T  49336693 atccacattgaggatagaacaaccgcacaaaaaaagagagacaccacactcttacccagaactttaagactatgggtttatgggtcctcttacttataag 49336792  T
Q  132 gttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||  |||| |||||||||||||||||||| || ||||| ||||||||||    
T  49336793 gtggtcaa-cctttacttttctatccgatgtgagacatgtaactcacac 49336840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 41359774 - 41359904
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| |||| |||||| ||| |||||| |||| ||||| | || | ||||||||| | ||||||||||| |||||| ||||||||||||||||||||     
T  41359774 ccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggta 41359873  T
Q  135 ttcaaacctttacttttctatccgatatggga 166  Q
    ||| |||||||||| || |||||||| |||||    
T  41359874 ttc-aacctttactattgtatccgatgtggga 41359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 29644569 - 29644734
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||||  || ||||||||||||| || | || ||| ||| || |||  ||| ||||| | |||| ||||||||| | ||||| ||||| ||||||     
T  29644569 gaggggagtttgggggaccatccacatcgaagctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatg 29644668  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| |||||||||||||||| ||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  29644669 ggttctcttacttataaggtgttc-aacctttactctttaatccgatgtgggacatataactcacac 29644734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 45901808 - 45901718
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| ||||| | |||  | || |||||||| |||||||||||||||||||    
T  45901808 aaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacac 45901718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 52634789 - 52634681
Alignment:
Q  71 agacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 169  Q
    ||||||| |||| ||||||||| | ||||||||||| |||||| |||| ||||||||||||||  ||||| |||||||| || |||||||| ||||||||    
T  52634789 agacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaa-cctttactgttttatccgatgtgggacat 52634692  T
Q  170 ataactcacac 180  Q
    |||||||||||    
T  52634691 ataactcacac 52634681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 29644904 - 29645055
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| || ||| ||| || |||  ||| ||||| | |||| ||||||||| | ||||| ||||| |||||| ||||||||||||||    
T  29644904 ggaccgtccacatcgaggctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttactta 29645003  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||  |||||||||| || |||||||| |||||||||||||| ||||    
T  29645004 taaggtgtt-taacctttactcttttatccgatgtgggacatataacttacac 29645055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 32589859 - 32589716
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||  |||||| ||| ||||||  ||| |||| ||||||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  32589859 ggaccgtccacatcgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 32589760  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    |||||| ||| |||||||| | || ||||  || |||||||||||    
T  32589759 taaggtgttc-aacctttattattttatcttatgtgggacatata 32589716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 33175725 - 33175817
Alignment:
Q  90 aaactttaaggcaatgagtttatt---ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||||   ||| |||||||||||||||| ||||| |||||||||||||||| ||| || ||||||||||||||||    
T  33175725 aaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaa-cctttacttttctatctgatgtgagacatataactcacac 33175817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 42342089 - 42342196
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||||||||||  ||||||||||    
T  42342089 ggaggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttac 42342188  T
Q  125 ttataagg 132  Q
    ||||||||    
T  42342189 ttataagg 42342196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 4823761 - 4823660
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | |||||||||||||||||| ||||||| |||||||||||| ||  ||| |||||| || |||||||| || ||| |||||||||    
T  4823761 cactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtt-taacttttactattttatccgatgtgagacttataactca 4823663  T
Q  178 cac 180  Q
    |||    
T  4823662 cac 4823660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 7767383 - 7767464
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    ||||| ||||| ||||||  ||||||||| |||||| || | ||| |||||||||||||||||||| ||||||||||||||||    
T  7767383 ttaagacaatgggtttatgagtcctcttagttataaagtgtccaa-cctttacttttctatccgatgtgggacatataactca 7767464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 39389164 - 39389075
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||| |||||| |||||||||| || |||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  39389164 aaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaa-cctttactattttatccgatgtaggacatataactcacac 39389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 9240238 - 9240154
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||  ||||| |||||||||||||||||||| ||||  | ||||||| |||||||||| ||| |||||||||||||||    
T  9240238 ttaaggtaatggatttatgggtcctcttacttataaggtgttcag-cttttacttctctatccgatgtggaacatataactcacac 9240154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 50612541 - 50612605
Alignment:
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||||    
T  50612541 gtcctcttacttataaggtgttcaatc-tttactattttatccgatgtgggacatataactcacac 50612605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 54017905 - 54017969
Alignment:
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  54017905 gtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtaggacatataactcacac 54017969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 42584903 - 42584970
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||| | |||||||||||||||||| ||||| | |||||| ||||||||||| ||||||||||||||    
T  42584903 gtttatggatcctcttacttataaggtgttcaatc-tttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 51886645 - 51886566
Alignment:
Q  100 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||| |||||||||||||||| | | ||| |||||||||| || ||| |||| || ||||||||||||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttc-aacctttactattttattcgatgtgagacatataactcacac 51886566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 53118064 - 53118127
Alignment:
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||||||||| ||||| |||||||| || |||||||||||| |||||||||||||||    
T  53118064 tcctctcacttataaggtgttcaa-cctttactcttttatccgatatggaacatataactcacac 53118127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 45395656 - 45395806
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||| | |||||||||| |||| ||||  | |||| ||||||||| | ||||| ||||| |||||| | |||||||||||||    
T  45395656 gaccctccacatcgaggctagagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttat 45395755  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || || ||  |||||||||| || ||| |||| ||||| |||||||| ||||    
T  45395756 aacgtgtt-taacctttactcttttattcgatgtgggatatataacttacac 45395806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 8327998 - 8327909
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| |  |||||| ||| |||||||||||||| | ||||  |||||||| || |||||||| |||||||||||||||||||    
T  8327998 aaaccttaaggcattacgtttatgggttctcttacttataagatattcat-cctttactcttttatccgatgtgggacatataactcacac 8327909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 31190087 - 31190022
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||||||||| ||| |||||||||| || |||||||| |||||||||| ||||||||    
T  31190087 ggtcctctaacttataaggtgttc-aacctttactcttttatccgatgtgggacatatcactcacac 31190022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 39336293 - 39336382
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||||||||||| | |||||| |||||||| || ||||| |||  |  |||||||||||| |||||||||||||||||||    
T  39336293 aaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaa-cctccaactttctatccgatgtgggacatataactcacac 39336382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 54018190 - 54018351
Alignment:
Q  19 ggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtc 117  Q
    ||||||||| |||||  |||||| |||| |||||| ||| ||||||   || ||||  | |||| ||||||||| | |||||||  |  |||||| ||||    
T  54018190 ggagtcagggggaccgcccacatcgaggctagaacaaccacacaagcatgagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtc 54018289  T
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| ||| || ||||||| || ||||||||   |||||||||||||||||    
T  54018290 ctcttacttataaggtgttc-aatctttactcttttatccgatgcaggacatataactcacac 54018351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 3135137 - 3135224
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| ||| |||| || |||||| ||| || ||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||    
T  3135137 aaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaa-catttactattttatccgatgtgggacatataactcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 37726572 - 37726509
Alignment:
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  37726572 tcctcttacttataaggtattcaa-catttactattttatccgatgtgagacatataactcacac 37726509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 52635046 - 52634991
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    |||| ||||||||| | |||||||||||||||||| |||||||||| |||||||||    
T  52635046 cactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataaggt 52634991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 12747871 - 12747905
Alignment:
Q  146 acttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||| |||||||||||||||||||    
T  12747871 acttttctatccgatgtgggacatataactcacac 12747905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 32462622 - 32462712
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| |||||  |||||| | || ||||||||||||||| ||||| | |||||| ||  || |||| |||||||||||||||||||    
T  32462622 aaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacac 32462712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 33362362 - 33362449
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggga---catataactcacac 180  Q
    |||||| |||| |||||| |||||||||||||||||||| ||| |||||||| | || ||||||| ||| ||   ||||||||||||||    
T  33362362 ttaaggaaatgggtttatgggtcctcttacttataaggtattc-aacctttattattttatccgacatgagatatcatataactcacac 33362449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 36986040 - 36986101
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| ||| |||| |||| |||||||||| |||| |||||||||||||||||||    
T  36986040 ctctcacttataaagttctcaa-ccttcacttttctattcgatgtgggacatataactcacac 36986101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 37011479 - 37011540
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| ||| |||| |||| |||||||||| |||| |||||||||||||||||||    
T  37011479 ctctcacttataaagttctcaa-ccttcacttttctattcgatgtgggacatataactcacac 37011540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 22304292 - 22304251
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  22304292 aacctttactattttatccgatgtgggacatataactcacac 22304251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 39914329 - 39914257
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||| ||||||||| ||||| ||| |||| || |||| ||| || ||||||||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaa-cctctactgttttatctgatgtgagacatataactcacac 39914257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 3384330 - 3384417
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    ||||||||||||| | ||||||| ||||||||| ||||||| || ||  ||||| |||| || ||||  || |||||||||||||||||    
T  3384330 aaactttaaggcattaagtttatgggtcctcttccttataaagtgtt-taacctatactgttttatcatatgtgggacatataactcac 3384417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 10074352 - 10074516
Alignment:
Q  16 aggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattg 114  Q
    ||||||| | || |||| |||||||| |||| |||||| ||| ||| || |||| ||||  | |||| ||||||||| | |||||||||||||||||| |    
T  10074352 aggggagcctgggggactatccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 10074451  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| |||||| | ||||||||||    
T  10074452 gtcctcttacttataaggtgttc-aacctttacttttctatccgatgtgggacctctaactcacac 10074516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 3409407 - 3409264
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| |||||||||||||||||||| |    
T  3409407 cacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgt 3409308  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || |||||||||| || |||| ||| |||||||||||||||||||    
T  3409307 tc-aacctttactattttatctgatgtgggacatataactcacac 3409264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 29518659 - 29518508
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||| |||| |||||| ||||||||||||||    
T  29518659 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttactta 29518560  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  29518559 taaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 29518508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 29519076 - 29518925
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||| |||| |||||| ||||||||||||||    
T  29519076 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttactta 29518977  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  29518976 taaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 29518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 32741335 - 32741184
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||| |||| |||||| ||||||||||||||    
T  32741335 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttactta 32741236  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  32741235 taaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 32741184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 2579496 - 2579645
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| ||||||||||| ||| ||||||  ||| ||||  |  ||| ||||||||| | |||||||||||||||||| || |||||||||||||    
T  2579496 accatccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttata 2579595  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| | ||  |||||||||||| | |||||| |||||||||||||||||||    
T  2579596 agg-tatccgacctttacttttttgtccgatgtgggacatataactcacac 2579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 2377910 - 2377759
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||  ||| | ||||  ||||||||  | |||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  2377910 ggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 2377811  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  2377810 taaggtgttc-aacctttactcttttaaccgatgtgggacatataactcacac 2377759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 10074055 - 10074142
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||||||||||||||| ||||| |||||||||||    
T  10074055 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacgtttacttttctatccgatgtgggatatataactcac 10074142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 32460614 - 32460733
Alignment:
Q  61 caagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccga 159  Q
    |||| |||||||| ||| |||| ||||||||| | ||||||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || ||| |||    
T  32460614 caagtgagaaagatgtcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatacga 32460712  T
Q  160 tatgggacatataactcacac 180  Q
    | |||||||||||||||||||    
T  32460713 tgtgggacatataactcacac 32460733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 2378220 - 2378131
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||| |||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  2378220 aaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 2378131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 3058376 - 3058231
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| ||||||||||| |||| |||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||| | ||||| ||||||||||||    
T  3058376 tccacatcgaggttagaaccaccctacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggt 3058277  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || |||||||| |||||||||||||| ||||    
T  3058276 gttcaa-cctttactattttatccgatgtgggacatataactaacac 3058231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 14748402 - 14748491
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||||||||||| |||||||||| ||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  14748402 aaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttc-aacctttactattttatccgatgtgggacatataactcacac 14748491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 9062402 - 9062501
Alignment:
Q  79 cactgttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| |||||||||  ||||| ||||||||||||  ||||||||||||||||| | ||| |||||||||| || |||||||| |||||||||||||||||    
T  9062402 cacttttacccaaaacttaagacaatgagtttatgagtcctcttacttataagatgttc-aacctttactattttatccgatgtgggacatataactcac 9062500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 10073604 - 10073767
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttatt 113  Q
    |||||||| | | |||||| ||||||| || | |||||| ||| ||| || |||| ||||  | |||| ||||||||| | ||||| ||||||||||||     
T  10073604 gaggggagcctgaaggaccgtccacatcgatgctagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatg 10073703  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    | |||||||||||||||||| ||| ||||||||||||||  |||||| |||||||||||||| ||||    
T  10073704 gatcctcttacttataaggtgttc-aacctttacttttc--tccgatgtgggacatataactaacac 10073767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 10911660 - 10911570
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttac-ttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||| |||| |||| ||| | |||||||||||||||||    
T  10911660 aaactttaaggcaatgagtttatgagtcctcttacttataaggtgttc-aacctttactttttttatctgatgtaggacatataactcacac 10911570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 16455063 - 16454913
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||  |||||| |||||| |||||||    
T  16455063 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattactta 16454964  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||| ||| |||||||||| || |||| ||| ||||||| ||||||||||    
T  16454963 taaggtgttc-aacctttactcttttatctgatgtgggacacataactcaca 16454913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 35210298 - 35210209
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||||||||||    
T  35210298 aaaccttaaggcaatggttttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgagacatataactcacac 35210209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 16107847 - 16107683
Alignment:
Q  16 aggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattg 114  Q
    |||||||| ||| | |||| |||||| |||| |||| | ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| ||||||      
T  16107847 aggggagttaggggtaccacccacatcgaggctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatga 16107748  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||  ||||||||||||| |||||||| ||  |||||||||||||||    
T  16107747 gtcctcttacttataaggtgtt-taacctttacttttttatccgatgtgacacatataactcacac 16107683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 2579874 - 2580025
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | || | ||||||||| | |||||||  || |||||| ||||||||||||||    
T  2579874 ggaccttccacatcgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttactta 2579973  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  2579974 taatgtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 2580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 16454731 - 16454580
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||| ||||| | ||||||||||| |||||| ||||||||||||||    
T  16454731 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttactta 16454632  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| ||| |||| | || |||| ||| ||||||| |||||||||||    
T  16454631 taaggtgttc-aacttttattcttttatctgatgtgggacacataactcacac 16454580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 26544197 - 26544054
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    |||||||||| |||||| | | ||||||  ||| |||| || |||| |||| |||| | |||||||  || |||||| ||||||||||||||||| || |    
T  26544197 cacattgaggctagaacaatcgcacaagcaagagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgt 26544098  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| || |||||||| |||||||||||||||||||    
T  26544097 tcaa-cctttactattttatccgatgtgggacatataactcacac 26544054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 1127516 - 1127366
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    |||||| |||||| ||||||||| | ||| || |||  ||| ||||| | |||| ||||||||| | |||||| |||| ||||||  |||||||||||||    
T  1127516 ggaccacccacatcgaggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttactta 1127417  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||| ||| |||||||||| || || ||||| ||||| ||||||||||||    
T  1127416 taaggtgttc-aacctttactattttacccgatgtgggatatataactcaca 1127366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 3415552 - 3415463
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||||| || |||  ||| |||||||||||||||||||    
T  3415552 aaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttc-aacctttactattttatgtgatgtgggacatataactcacac 3415463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 6999860 - 6999949
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| ||||||||| | ||||||||| |||||||| ||||| | ||||||||| |||||||| | |||||||||||||||||    
T  6999860 aaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaa-cttttacttttttatccgatgtaggacatataactcacac 6999949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 16108152 - 16108068
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||| ||| ||| |||||||||||||||    
T  16108152 ttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacatttactcttttatctgatgtggaacatataactcacac 16108068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 2578445 - 2578595
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  | | ||||  | |||| ||||||||| | ||||||| ||| |||||| ||||||||||||||    
T  2578445 ggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttactta 2578544  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||| |||||||||| || |||||| | |||||||||||||||||||    
T  2578545 taaagtgttc-aacctttactcttttatccg-tgtgggacatataactcacac 2578595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 593773 - 593862
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| |  ||||||  ||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||| |||||||||    
T  593773 aaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatacaactcacac 593862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 1950201 - 1950338
Alignment:
Q  43 gaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaac 141  Q
    |||| |||||| ||| ||||||  ||| ||||||| |||| |||| |||| | |||||||| |   ||||| | ||||||||||| |||||| ||||| |    
T  1950201 gaggctagaacaaccgcacaagtaagagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaa-c 1950299  T
Q  142 ctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| || |||||||| |||||||||||||||||||    
T  1950300 ctttactcttttatccgatgtgggacatataactcacac 1950338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 2578823 - 2578987
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| | || ||||| ||||||| ||||| ||||| ||| ||||||  | | ||||  | |||| ||||||||| | |||||| |||||||||||     
T  2578823 gaggggagcctgggggaccgtccacatcgaggtcagaacaaccacacaagcaaaagagacaccacactcttacccaaaaccttaaggtaatgagtttatg 2578922  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    | |||||||| ||||||||| ||| ||| ||||||||| ||||||||  ||||||||||| ||||||    
T  2578923 gatcctcttatttataaggtattc-aacatttactttt-tatccgatgagggacatataaatcacac 2578987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 2843725 - 2843560
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    ||||||||| ||| ||||| ||||||| |||| |||||| ||| | ||||  ||| |||   | |||| ||||||||| | ||||||||||||||||||     
T  2843725 gaggggagttagggggaccgtccacatcgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaaggcaatgagtttatg 2843626  T
Q  114 gg-tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    || |||||||||||||||||| ||| ||| |||| | || |||||||| ||  ||||||||||||||    
T  2843625 gggtcctcttacttataaggtgttc-aacttttattattttatccgatgtgaaacatataactcaca 2843560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 3409816 - 3409665
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaactttaa-ggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| |||||||||   ||| ||||||| |||||| ||||||||||||||    
T  3409816 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttactta 3409717  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| | ||| ||| |||||| || |||| ||| ||| |||||||||||||||    
T  3409716 taagatgttc-aacttttactattttatctgatgtggtacatataactcacac 3409665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 5832108 - 5832179
Alignment:
Q  108 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| |||||||||||||||||||| ||| |||||||||| || ||||| || |||||||||||||| ||||    
T  5832108 tttatgggtcctcttacttataaggtgttc-aacctttactcttttatccaatgtgggacatataacttacac 5832179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 17135144 - 17135222
Alignment:
Q  101 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||   ||||||| |||||||||| || |||| ||||||| |||||||||| || ||||||||||||||||    
T  17135144 caatgagtttatgaatcctcttgcttataaggtatt-aaacatttacttctctatccgatgtgagacatataactcacac 17135222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 1846842 - 1846753
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| ||| |||||||||||||||| ||| |||||||||| || |||||||| || |||||| || ||||||    
T  1846842 aaaccttaaggcaatggatttatgggtgctcttacttataaggtgttc-aacctttactattttatccgatgtgagacatagaattcacac 1846753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 5958667 - 5958755
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||||||| ||||||||||||  || |||||| ||||||||| ||| |||||||||| || |||||||| |   ||||||||||||||    
T  5958667 aaactttaagacaatgagtttatgagttctcttatttataaggtgttc-aacctttactgttttatccgatgtaacacatataactcaca 5958755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 6071221 - 6071137
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| | || ||| |||||||| || ||||| |||  |||||||||| | || |||||||||||||||||||    
T  6071221 ttaaggcaatgagtttatggatcatctcacttataaagtgttcaa-cctccacttttctattcaatgtgggacatataactcacac 6071137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 12092546 - 12092629
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 174  Q
    |||| |||||||||||||||||| | |||||| |||||||| ||  || |||||  ||||||||||||||| |||||||| ||||    
T  12092546 aaaccttaaggcaatgagtttatggatcctctcacttataaagtgctc-aacctccacttttctatccgatgtgggacatctaac 12092629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 36629393 - 36629242
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||||||||||||||    
T  36629393 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttactta 36629294  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||  ||| |||||||||||||||||| |||||||||||||||||||    
T  36629293 taaggtgtt-taacttttacttttctatccgatgtgggacatataactcacac 36629242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 49076504 - 49076599
Alignment:
Q  84 ttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||||||| |||||||||||||||    
T  49076504 ttacccaaactttaagacaatgggtttataggtcctcttacttataaggtgttc-aacctttactgttttatccgatatggtacatataactcacac 49076599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 3244513 - 3244602
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| |||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||| || ||||||||||||||||    
T  3244513 aaactttaagacaatgagtttatgggtcctcttacttataagatgttc-aacctttacttttctatccgatgtgagacatataactcacac 3244602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41370451 - 41370362
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||| || |||||||| |||||||||||||||||||    
T  41370451 aaactttaaggcaatgggtttatgggtcctcttacttataaggttttc-aacatttactattttatccgatttgggacatataactcacac 41370362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 16888884 - 16888967
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  16888884 taagacaatgagtttataggttctcttacttataaggtattcaa-cctttacttttctatccgatgtgggacatataactcacac 16888967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 39792858 - 39793011
Alignment:
Q  27 gaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttact 125  Q
    ||||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||  | ||||||| ||    
T  39792858 gaggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttct 39792957  T
Q  126 tataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||| | |||||||||||||| ||| |||||||||||||||||||    
T  39792958 tataaggtgttcaa-catttacttttctatctgatgtgggacatataactcacac 39793011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 2740794 - 2740705
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||  || |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  2740794 aaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaa-cctttactgttctatccgatgtgggacatataactcacac 2740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 32941129 - 32941274
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||||| |||| ||||||||| | ||||||||||||||||||  | ||||||| |||||||||    
T  32941129 tccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggt 32941228  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||| |||||||||| |||| |||||| |  ||||||||||||||||    
T  32941229 gttc-aacctttactgttctttccgatgtaagacatataactcacac 32941274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 52884981 - 52884892
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  52884981 aaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 52884892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 55933186 - 55933275
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||| |||| ||||| || |||||||| | |||||||||||||||||    
T  55933186 aaactttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacccttactattttatccgatgtaggacatataactcacac 55933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 16889536 - 16889687
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| ||||||||||| | | ||||||  ||| ||||  |  ||| ||||||||| |||||||||| |  ||||||   ||||||||||||    
T  16889536 ggaccgtccacatcgaggttagaacaatcacacaaggaagagagacaccatactcttacccaaaactttaaggcagtaggtttatgaatcctcttactta 16889635  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||||||||||    
T  16889636 taaggtattcaa-cctttacttttctatccgatttgagacatataactcacac 16889687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 25483504 - 25483341
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattgg 115  Q
    |||||| ||||  |||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||| |     
T  25483504 ggggagccagggagaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgga 25483405  T
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| | ||||| |||||||| || |||||||| || ||||||||||||||||    
T  25483404 tcctcttacttataagatgttcaa-cctttactattttatccgatgtgagacatataactcacac 25483341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 3340962 - 3340812
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||||| ||||||||||  ||||||||  | |||| ||||||||| | |||||||| || |||||| |||||||||||||||    
T  3340962 gaccgtccacatcgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttat 3340863  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||  || |||||||||| ||  ||| |||  ||||||||||||||||||    
T  3340862 aaggtgctc-aacctttactctttcatctgatgcgggacatataactcacac 3340812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 54109018 - 54108928
Alignment:
Q  79 cactgttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||| |||||||||  ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||    
T  54109018 cactcttacccaaaacttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 2741165 - 2741076
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||   |||| |||||||||||||||||||| ||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  2741165 aaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaa-cctttactattctatctgatgtgggacatataactcacac 2741076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 4955379 - 4955468
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||| ||| |||||| ||| || ||||||||||| ||||||||||||||||    
T  4955379 aaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aaccttaactattttatccgatatgagacatataactcacac 4955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 34646711 - 34646800
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||||||||||  ||||||||| ||||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  34646711 aaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttc-aacatttactgttttatccgatgtgggacatataactcacac 34646800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 179
Target Start/End: Original strand, 51768061 - 51768210
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| ||||||||||| | |||| |||  ||| |||| ||| ||| ||||||||| | ||||| ||||||||||||  ||||||||| ||||    
T  51768061 gaccgtccacatcgaggttagaacaatcccataagtaagagagacatcgtacttttacccaaaaccttaagacaatgagtttatgagtcctcttatttat 51768160  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||| ||| ||| |||||| || ||| |||||| ||||||||||||||||    
T  51768161 aaggtgttc-aacatttactcttatattcgatataggacatataactcaca 51768210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 52884789 - 52884700
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| | || ||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  52884789 aaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 52884700  T

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Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 760278 - 760194
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| |||||||| |||||||| ||| || |||||| | |||||||| |||| |||||||||||||||||||    
T  760278 ttaaggcaatgagtttatgggtcctctcacttataaagttctc-aaccttcatttttctattcgatgtgggacatataactcacac 760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 41707515 - 41707615
Alignment:
Q  79 cactgttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| ||||| |||| ||||| |||||||||||| ||| || ||||||||| ||| ||||| |||||||| || |||||||| |||||||||||||||||    
T  41707515 cactcttaccaaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaa-cctttactcttttatccgatgtgggacatataactcac 41707613  T
Q  179 ac 180  Q
    ||    
T  41707614 ac 41707615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 50630817 - 50630904
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| ||||||||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||||| | |||||||||||||||    
T  50630817 aaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttc-aacctttactattttatccgatgtaggacatataactcac 50630904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 1731647 - 1731797
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||||||| |||||| ||| ||||||  ||| | ||  | |||| ||||||||| | ||||||||||  |||||| |||||||||| |||    
T  1731647 ggaccgtccacattgaggctagaacaaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttattta 1731746  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| | ||||| |||||||| || |||| ||| ||||||||||||||||||    
T  1731747 taagatgttcaa-cctttactgttttatctgatgtgggacatataactcaca 1731797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 22183253 - 22183415
Alignment:
Q  18 gggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggt 116  Q
    ||||||| || ||||| ||||||| |||| |||||| |||  ||||| |||| ||||| | |||| ||| ||||| | ||||||||||| |||||| |||    
T  22183253 gggagtctgggggaccgtccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggt 22183352  T
Q  117 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| ||||||||||  | ||| ||| |||||| || |||||||| ||||| |||||||||||||    
T  22183353 ccttttacttataaattgttc-aacatttactcttttatccgatgtgggatatataactcacac 22183415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 54017596 - 54017746
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||||| ||| || |||  ||| |||| || |||| ||||| ||| | ||||||||||| |||||| |||||||||||||||    
T  54017596 gaccgtccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttat 54017695  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| | ||| |||||||||| || |||| ||  |||||||||||||||||||    
T  54017696 aagatgttc-aacctttactattttatctgacgtgggacatataactcacac 54017746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 49880254 - 49880165
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| || |||||| |||||||||||||||||||| ||| |||||||||| || ||| | || |||||||||||||||||||    
T  49880254 aaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttc-aacctttactattttattcaatgtgggacatataactcacac 49880165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 54741264 - 54741329
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||| ||||||    
T  54741264 ggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataattcacac 54741329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 22028369 - 22028515
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||||||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||| |||||||||||| |||||||||||| |    
T  22028369 ggaccgtccacattgaggctagaacaacctcacaagcaagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaa 22028468  T
Q  128 taaggttttcaaaccttta--cttttctatccgatatgggacatataa 173  Q
    |||||| ||| ||||||||   |||| |||||||| | ||||||||||    
T  22028469 taaggtgttc-aacctttatttttttttatccgatgtaggacatataa 22028515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 39404174 - 39404023
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | |||| || ||||||||||  |||||||||||||    
T  39404174 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttactta 39404075  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||| |||||||||| || ||| | || | |||||||||||||||||    
T  39404074 taaagtgttc-aacctttactcttttattcaatgtaggacatataactcacac 39404023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 44620509 - 44620362
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||  |||||||||| ||| ||||||  ||| | || || |||| ||||||||| | ||||||||||| |||||| ||  |||||| |||    
T  44620509 ggaccgtccacatcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttattta 44620410  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactc 176  Q
    |||||| ||||| |||||||| || |||||||| ||| |||||||||||    
T  44620409 taaggtgttcaa-cctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 45496899 - 45496820
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||||  || |||||||| |||||||||    
T  45496899 aaaccttaagacaatgagtttataggtcctcttacttataaggtgttc-aacctttacgattttatccgatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 10245991 - 10245925
Alignment:
Q  113 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||||| ||||| |||||||| || |||||||| |||| ||||||||||||||    
T  10245991 tggtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtggggcatataactcacac 10245925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 43827595 - 43827492
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaactttaaggcaatgagtttattggtcctcttacttat 128  Q
    ||||| ||||||| ||||||||||| ||| ||||||  ||| ||||  | |||| ||| |||||| |||||||||||| ||||| |||||||||| ||||    
T  43827595 ggaccgtccacatcgaggttagaacaaccgcacaagtaagagagacaccacactcttatccaaaccttaaggcaatgaatttatgggtcctcttatttat 43827496  T
Q  129 aagg 132  Q
    ||||    
T  43827495 aagg 43827492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 22028023 - 22028112
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||  | || |||||||| |||||||||||| ||||||    
T  22028023 aaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttc-aacctttcgtattttatccgatgtgggacatataagtcacac 22028112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 31691272 - 31691202
Alignment:
Q  65 agagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    ||||| ||||| | |||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||    
T  31691272 agagatagacgccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtt 31691202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 36572113 - 36572024
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| |||| ||||||||||||||| ||| ||| |||||| || ||| |||| |||||||||||||||||||    
T  36572113 aaaccttaaggcaatggatttatgggtcttcttacttataaggtgttc-aacatttactcttttattcgatgtgggacatataactcacac 36572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 39404492 - 39404403
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||  |||||| |||||||||||||||||||| ||| | |||||||| || |||| ||| |||||||||||||||||||    
T  39404492 aaaccttaaggctataggtttatgggtcctcttacttataaggtgttcca-cctttactcttttatctgatgtgggacatataactcacac 39404403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 49303000 - 49302909
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttactt--ataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||  ||||| | ||||| ||||||||||| |||  ||| |||||||||||||||||||    
T  49303000 aaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaa-cctttacttttttatttgatgtgggacatataactcacac 49302909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 50002575 - 50002431
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||| |||||  ||||| |||||||||||||| || ||     
T  50002575 ccacatcgaggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtg 50002476  T
Q  135 ttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| |||||||| || |||||||| || ||||||||||||||||    
T  50002475 ttcaa-cctttactcttttatccgatgtgagacatataactcacac 50002431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 54343087 - 54343147
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  54343087 ggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 20826306 - 20826223
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||||| ||| |||||| ||| ||||||||||||| || ||||| | |||||| || |||||||| ||||||||||||||||||    
T  20826306 ttaaggctatgggtttatgggttctcttacttataacgtgttcaa-cttttactattttatccgatgtgggacatataactcaca 20826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 36608661 - 36608812
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||| || |||| ||||  | |||| ||||||||| | ||||| |||||  ||||| | ||||||||||||    
T  36608661 ggaccgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttactta 36608760  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    | |||| ||||| | |||||| || |||||||| | |||||||||||||||||    
T  36608761 tgaggtgttcaa-cttttactcttttatccgatgttggacatataactcacac 36608812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 54108686 - 54108551
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagttt-attggtcctcttacttataaggt 133  Q
    ||||||||||| |||||| ||| ||||||  ||| ||||  | |||| ||| ||||| | |||||||||||| ||| || |||||| |||||||||||||    
T  54108686 ccacattgaggctagaacaaccacacaagcaagatagacaccacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggt 54108587  T
Q  134 tttcaaacctttacttttctatccgatatgggacata 170  Q
     ||||| |||||||| || ||||| ||||||||||||    
T  54108586 gttcaa-cctttactattttatcctatatgggacata 54108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 3341246 - 3341133
Alignment:
Q  67 agaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggg 165  Q
    |||||||| || |||| ||||||||| | ||||  ||||||  |||| ||||||||||||||||| || || || |||||||| || ||||| || ||||    
T  3341246 agaaagacatcacactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaa-cctttactcttttatccaatgtggg 3341148  T
Q  166 acatataactcacac 180  Q
    |||||||||||||||    
T  3341147 acatataactcacac 3341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 18932811 - 18932880
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 160  Q
    |||| ||||||||||| |||||| |||||||||| ||||||||| ||| |||||||||| || ||||||||    
T  18932811 aaaccttaaggcaatgggtttatgggtcctcttatttataaggtattc-aacctttactattttatccgat 18932880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 44621096 - 44621011
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 176  Q
    |||| ||||| ||||||||||||  | ||||||||||||||||| ||| |||||||||| || |||||||| |||| |||| |||||    
T  44621096 aaaccttaagacaatgagtttatgtgccctcttacttataaggtgttc-aacctttactgttttatccgatgtgggtcatacaactc 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 44620737 - 44620665
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||||||||||||||| || ||||| ||| |||| ||  ||||||| |||||||||||||||||||    
T  44620737 gtttatgggtcctcttacttataaagtgttcaa-cctctactatttcatccgatgtgggacatataactcacac 44620665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 20825913 - 20825842
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||| ||| |||||| ||||||||| ||||| |||||||| || |||||||| ||| ||||||||||||||    
T  20825913 gtttatgggtgctcttatttataaggtgttcaa-cctttactcttttatccgatgtggaacatataactcaca 20825842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 34004593 - 34004734
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| |||| |||||| ||| |||||| |||| ||||| | |||| ||| | ||| | |||||| ||||||||||| |||||||||||||||||| | |    
T  34004593 cacatcgaggctagaacaaccgcacaagggagagagacggcacactcttatcgaaaaccttaagg-aatgagtttatgggtcctcttacttataagttgt 34004691  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || |||||||| |||| ||||  || || ||||||||||||||||    
T  34004692 tc-aacctttagtttt-tatcatatgtgtgacatataactcacac 34004734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 54936290 - 54936215
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggga 166  Q
    |||| ||||||||||| |||||| |||||||||||||| ||||| ||| |||||||||| || |||| ||| |||||    
T  54936290 aaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttc-aacctttactattttatctgatgtggga 54936215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 44620362 - 44620304
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||||| ||||| |||||||| || ||||| || ||||||||||||||||    
T  44620362 ctcttacttataaggtgttcaa-cctttactattttatcccatgtgggacatataactca 44620304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 28034323 - 28034234
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||| ||||||| ||| |||| |||||||| || ||||| |||  |||||||||||||||  ||||||||||| ||||||    
T  28034323 aaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaa-cctccacttttctatccgatgcgggacatataattcacac 28034234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 49076837 - 49076981
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||||||||  | |||| | ||||||| | ||||||  ||| |||||| ||| |||||||| |||||||    
T  49076837 tccacatcgaggctagaacaaccgcacaagcaagaaagacaccacactctaacccaaaaccttaaggttatgggtttatgggttctcttact-ataaggt 49076935  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || || || |||||| |||||||||||||||    
T  49076936 gttcaa-cctttactattttagccaatatggaacatataactcacac 49076981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 50459803 - 50459726
Alignment:
Q  102 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||  ||||||||||||||||| | ||||| |||||||| || || ||||| ||| |||||||||||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaa-cctttactcttttaaccgatgtggaacatataactcacac 50459726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 54017788 - 54017845
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| ||||| |||||    
T  54017788 ggtcctcttacttataaggtgttc-aacctttactgttttatccgatgtgggatatata 54017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 3700434 - 3700370
Alignment:
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||||||||||||| ||||| | |||||| || |||||||| | |||||||||||||||||    
T  3700434 gtccttttacttataaggtgttcaa-catttactcttttatccgatgtaggacatataactcacac 3700370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 4390189 - 4390252
Alignment:
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| ||| |||||||||| || |||| ||| ||||| || ||||||||||    
T  4390189 tcctcttacttataaggtgttc-aacctttactcttttatctgatgtgggatatgtaactcacac 4390252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 6975543 - 6975606
Alignment:
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||||||||||||||| | ||||| |||||||| || |||| ||| || |||||||||||||||    
T  6975543 gtcctcttacttataagatattcaa-cctttactattttatcggatgtgagacatataactcaca 6975606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 42514805 - 42514654
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||||||||||  ||| ||||| | |||| ||||||||| | ||||||| ||| |||||| ||||||||||||||    
T  42514805 ggaccgtccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttactta 42514706  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||||||||||| ||| | |||||||||||||||||    
T  42514705 taaggtgttcaa-cctttacttttctatctgatgtaggacatataactcacac 42514654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 28254260 - 28254390
Alignment:
Q  48 tagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaaccttta 146  Q
    |||||| ||||||||||||||| | ||  | |||| ||||||||| | |||||||||||||||||| |||||||||||||||||| | ||| ||||||||    
T  28254260 tagaacaaccccacaagagagagacac--cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttc-aaccttta 28254356  T
Q  147 cttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||| |||||||||||| ||||||    
T  28254357 cttttctatccgatgtgggacatataagtcacac 28254390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 36005888 - 36006032
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||||||||||  ||| ||||| | |||| ||||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  36005888 tccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 36005987  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||| ||| ||||| ||||||| |||| |||||||||||||||||||    
T  36005988 gttc-aacttttac-tttctattcgatgtgggacatataactcacac 36006032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 179
Target Start/End: Original strand, 40679632 - 40679781
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||  |||||| ||||||||||  ||| ||||| | |||| ||||||||| | ||||||| ||| |||||| ||| |||||||||||    
T  40679632 gaccgtccacatcgagactagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttat 40679731  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  40679732 aaggtgttcaaccctt-acttttctatccgatatgggacatataactcaca 40679781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 41283539 - 41283628
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||||    
T  41283539 aaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatatgggacatataactcacac 41283628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 35580714 - 35580876
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattgg 115  Q
    ||||||||||| ||||| ||||||| |||| |||||| |||||||||   ||| ||||| |||||| |||||| |||| ||||||||||| ||||| |||    
T  35580714 ggggagtcagggggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccgcactcttacccaaaaccttaaggcaatgggttta-tgg 35580812  T
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||||||||| ||| ||| |||| | || |||||||| |||||||||||||||||||    
T  35580813 tcctctcacttataaggtgttc-aacatttattgttttatccgatgtgggacatataactcacac 35580876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 28531366 - 28531467
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | |||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||    
T  28531366 cactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaa-cctttgcttttctatccgatgtgggacatataactca 28531464  T
Q  178 cac 180  Q
    |||    
T  28531465 cac 28531467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 36178613 - 36178758
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||| ||||||||||||||||||||    
T  36178613 tccacatagaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggt 36178712  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||| |||||||||| || |||||||| |||||||||||||||||||    
T  36178713 gttc-aacctttactattttatccgatgtgggacatataactcacac 36178758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 962753 - 962603
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||||| ||| ||||||  |||  |||  | |||| ||||||||| | ||||| ||||| |||||| |||||||| ||||||    
T  962753 gaccgtccacatcgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttat 962654  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  962653 aaggtgttcaa-cctttacttttctatccgatgtgggacatataactcacac 962603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 15880422 - 15880268
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||| | ||||||| |||| || ||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||| |||||| |||||||||||    
T  15880422 ggaggaacgtccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttac 15880323  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| ||| |||||||||| || |||||||| ||| |||||||||||||||    
T  15880322 ttataaggtgttc-aacctttactcttttatccgatgtggaacatataactcacac 15880268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 6421541 - 6421390
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||  |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | | ||||||||||||||||  |||||||||||||    
T  6421541 ggaccgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttactta 6421442  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  6421441 taaggtgttc-aacctttactcttttatccgatgtgggacatataactcacac 6421390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 37106080 - 37105929
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| |||  |||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||||| ||||||||    
T  37106080 ggaccgtccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttactta 37105981  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || ||| |||| |||||||||||||||||||    
T  37105980 taaggtgttc-aacctttactattttattcgatgtgggacatataactcacac 37105929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 37106347 - 37106193
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| | | ||||||  ||| | ||  | |||| ||||||||| | |||||| |||| |||||| |||||||||||    
T  37106347 ggaggaccgtccacatcgaggctagaacaatcgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttac 37106248  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  37106247 ttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 37106193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 5542689 - 5542778
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||||| || ||| ||||||||||||||||||||||||    
T  5542689 aaaccttaaggcaataggtttatgggtcctcttacttataaggtgttc-aacctttactattttattcgatatgggacatataactcacac 5542778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 14745731 - 14745820
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||| || |||||||||||||||||||    
T  14745731 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatgtgggacatataactcacac 14745820  T

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Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 40733687 - 40733522
Alignment:
Q  16 aggggagtca-ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||||| || ||||||||||||| |||  | |||||||| |||||| |||| ||||  | |||| ||||||||| ||||||||   |  ||||||     
T  40733687 aggggagtcaagggggaccatccacatcgagacttgaactaccacacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatg 40733588  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||||| | ||||||||| |||| ||| |||||||||||||||||||    
T  40733587 ggtcctcttacttataaggtgttcaa-catttacttttttatctgatgtgggacatataactcacac 40733522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 31899496 - 31899579
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttc-aacatttactattttatccgatgtggaacatataactcacac 31899579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 16542538 - 16542454
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||| |||||||||| || |||||||| |||||| ||||||||||||    
T  16542538 ttaaggcaatgagtttataagtcctcttatttataaggtgttc-aacctttactattttatccgatgtgggacttataactcacac 16542454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 7598684 - 7598614
Alignment:
Q  109 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaa-cctttacttttttatctgatgtgggacatataactcacac 7598614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 40163375 - 40163520
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa--ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||| |||| ||||||||||| ||| ||||||  ||| ||||  | |||| |||||||||  ||| ||| || |  ||| || |||| |||||||||    
T  40163375 gaccatctacatcgaggttagaacaaccacacaagcaagagagacaccacacttttacccaaaaccttaaagacactaggttaatgggtcatcttactta 40163474  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataac 174  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||    
T  40163475 taaggtgttcaa-cctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 5543050 - 5543151
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | ||||||||||  |||||| | |||||||||||||||||| ||||| |||||||| || |||| ||| ||||||||||||||||    
T  5543050 cactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaa-cctttactattttatcggatgtgggacatataactca 5543148  T
Q  178 cac 180  Q
    |||    
T  5543149 cac 5543151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 6713133 - 6712981
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa--ctttaaggcaatgagtttattggtcctcttactt 126  Q
    ||||| ||||||| |||| |||||| | |||| |||  ||| |||| || |||| |||||||||  | |||| |||||  |||||| |||||||||||||    
T  6713133 ggaccgtccacatcgaggctagaacaatcccataagcaagagagacatcacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttactt 6713034  T
Q  127 ataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| ||| ||| |||||| || |||||||| || ||||||||||||||||    
T  6713033 ataaggtgttc-aacatttactgttttatccgatgtgagacatataactcacac 6712981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 38796299 - 38796371
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||||    
T  38796299 gtttataggtcctcttacttataaggtgttcaa-catttactgttttatccgatgtgggacatataactcacac 38796371  T

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Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 28254176 - 28254254
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 169  Q
    |||||||||||||| | ||||||  |||||||||||||||| || ||| |||||||||||||||||||||| || |||||    
T  28254176 aaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttc-aacctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 37895125 - 37895211
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||||| ||||||  || || |||||| |||||||||||| | |||| ||||||||||||| ||||||||||||||||    
T  37895125 aaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaa-cttttatttttctatccgatgtgggacatataactca 37895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 7598322 - 7598233
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||| |||||||||| ||||||||| || || ||||||||||||||| |||| | | |||||||| ||||||    
T  7598322 aaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaa-cctttacttttctattcgatgtagaacatataattcacac 7598233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 12529092 - 12529181
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||||||  ||||||||||||||| ||| ||| || ||||||| || |||  ||| | |||||||||||||||||    
T  12529092 aaactttaaggcaatgagtttatgagtcctcttacttatacggtgttc-aatctttactgttttatttgatgtaggacatataactcacac 12529181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 38796684 - 38796773
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| |  |||||| |||||||||||||||||||| ||| |||||||| | || |||| ||| |||||||||||||||||||    
T  38796684 aaaccttaaggcattaggtttatgggtcctcttacttataaggtgttc-aacctttattgttttatcagatgtgggacatataactcacac 38796773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 1769973 - 1769897
Alignment:
Q  103 atgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||  ||||||||||||||||||| ||| ||| |||||| || |||||||| || ||||||||||||||||    
T  1769973 atgagtttatgagtcctcttacttataaggtgttc-aacttttactcttttatccgatgtgtgacatataactcacac 1769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 31468814 - 31468899
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||| ||||||||||    |||| | ||||| |||||||| || |||||||| |||||||||||||||||||    
T  31468814 aaaccttaaggcaatgagtttatgggtcctctta----taagatattcaa-cctttactattttatccgatgtgggacatataactcacac 31468899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 15511547 - 15511646
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | ||||| ||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||| | || |||||||||||||    
T  15511547 cactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttc-aacctttactcttttatccgttgtgtgacatataactca 15511645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 30313303 - 30313189
Alignment:
Q  59 cacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 157  Q
    |||||| |||| ||||| | |||| ||||||||| | |||||||||||||||| | |||||||| |||||||| || ||| |||||  ||||||||||||    
T  30313303 cacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataa-gtgttc-aacctccacttttctatcc 30313206  T
Q  158 gatatgggacatataac 174  Q
    ||| || ||||||||||    
T  30313205 gatgtgagacatataac 30313189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 37894761 - 37894844
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||||||||  |||||  ||| |||||||||||||||||| |  ||||||||||||||| | || ||||||||||||||||||    
T  37894761 ttaaggcaatggatttatgagtcttcttacttataaggtttttag-cctttacttttctattcaatgtgggacatataactcaca 37894844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 30323558 - 30323469
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||| |||||||| |||| ||| || ||| |||||  | ||||||||| ||| ||||||||||||| |||||    
T  30323558 aaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttc-aacctccaattttctatctgatttgggacatataacacacac 30323469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 33561515 - 33561604
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||||||||||| |||||||| |||||||| || ||  |||||  ||||||||||| ||| ||| |||||||||||||||    
T  33561515 aaaccttaagacaatgagtttatgggtcctctcacttataaagtgtt-taacctccacttttctatctgatgtggaacatataactcacac 33561604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 33731742 - 33731653
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||  |||||| | ||||||||||||||||||  || |||||||||| || |||||||| || || |||||||||||||    
T  33731742 aaaccttaaggcaataggtttatggatcctcttacttataaggtgctc-aacctttactcttttatccgatgtgagatatataactcacac 33731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 36178333 - 36178422
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||| ||||||  |||| |||||||||||||| ||| | |||||||| || |||||||  |||||||||||||||||||    
T  36178333 aaaccttaagacaatgggtttatgagtccccttacttataaggtgttcca-cctttactattttatccgaagtgggacatataactcacac 36178422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 6422278 - 6422126
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattgg 115  Q
    ||||| ||||| ||||  ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||| ||| | ||||||| ||| |||||| ||    
T  6422278 ggggaatcagggggacagtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggtttatggg 6422179  T
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 169  Q
    |||||||| |||||| || ||||| ||||||||||| |||| ||| ||||||||    
T  6422178 tcctcttaattataatgtgttcaa-cctttacttttttatctgatgtgggacat 6422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 14745358 - 14745446
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| ||||||||||| |||||| ||||||| |||||| ||| | ||| |||| ||||| || ||| |||| ||||||||||||||||||    
T  14745358 aaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttc-aaccattactattttattcgatgtgggacatataactcaca 14745446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 29677064 - 29676908
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtc-----ctctt 122  Q
    ||||||||||||| |||||| |||| |||||||||   ||| ||||  | |||| ||||  ||| | ||||||||||| |||||| ||||     ||||     
T  29677064 ggaccatccacatcgaggttggaacaaccccacaattaagagagacaccacactcttacttaaagccttaaggcaatgggtttatgggtcttctcctctc 29676965  T
Q  123 acttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || |||||||| || ||||||||||| || |||||||| |||||||||||||||||||    
T  29676964 acctataaggtgtt-aaacctttactcttttatccgatgtgggacatataactcacac 29676908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 36178223 - 36178311
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac 167  Q
    |||| ||||||||| | ||||||||||| |||||| ||| | |||||||||||||| ||| |||||||||| || |||||||| ||||||    
T  36178223 cactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttc-aacctttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 37632678 - 37632750
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||  | | |||||||||||| || |||||||| | |||||||||||||||||    
T  37632678 gtttatgggtcctcttacttataaaatgt-caaacctttactattttatccgatgtaggacatataactcacac 37632750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 9231343 - 9231257
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    ||||||||||||  || ||| || | |||||||| ||||||  | ||||| |||||||||||||||| |||||| |||||||||||||    
T  9231343 aaactttaaggcggtgggttgatggatcctcttatttataatatgttcaa-cctttacttttctatctgatatgagacatataactca 9231257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 40733950 - 40733888
Alignment:
Q  117 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| || ||| ||||||| || ||| |||| |||||||||||||||||||    
T  40733950 cctcttacttataaggtgtt-aaatctttactcttttattcgatgtgggacatataactcacac 40733888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 3673236 - 3673122
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattgg 115  Q
    |||||| |||| ||||| ||||||| |||| |||||| ||| ||| ||  ||| |||| || |||| ||| ||||| | |||| ||||||||||||| |     
T  3673236 ggggagccagggggaccgtccacatcgaggctagaacaaccacactagtaagagagacatcacactcttagccaaaatcttaaagcaatgagtttatgga 3673137  T
Q  116 tcctcttacttataa 130  Q
    |||||||||||||||    
T  3673136 tcctcttacttataa 3673122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 29874087 - 29874176
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||  | |||||| || ||||| |||  ||||||||||| ||| ||||||||||||| |||||    
T  29874087 aaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaa-cctccacttttctatctgatgtgggacatataacacacac 29874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 36785675 - 36785716
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  36785675 aacctttactattttatccgatgtgggacatataactcacac 36785716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 29676622 - 29676543
Alignment:
Q  97 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||||| ||| |||| |||||||| || ||| || ||||||| || ||||| || || |||||||||||||    
T  29676622 aaggcaatgagtttatgggttctctcacttataatgtgttc-aatctttactcttttatccaatgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 29873569 - 29873684
Alignment:
Q  59 cacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 157  Q
    |||||| |||| ||||||| |||| |||| |||| | ||||||||||||||||||  ||||||  ||||||||  | ||| |||||  |||||||||||     
T  29873569 cacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttc-aacctccacttttctatct 29873667  T
Q  158 gatatgggacatataac 174  Q
    ||| |||||||| ||||    
T  29873668 gatgtgggacatgtaac 29873684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 33953816 - 33953923
Alignment:
Q  72 gacgtcgcactgttacccaaacttt-aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||||| |||| ||||||||| ||| |||||||   |||||| |||||||| |||||||  || ||||| |||  ||||||||||| ||| |||||| ||    
T  33953816 gacgtcacactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaa-cctccacttttctatctgatgtgggactta 33953914  T
Q  171 taactcaca 179  Q
    |||||||||    
T  33953915 taactcaca 33953923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 42515078 - 42515031
Alignment:
Q  122 tacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||||||||||| || || |||||||||||||||||||| |||||||||    
T  42515078 tacttataaggtgtttaa-cctttacttttctatccgatgtgggacata 42515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 3669857 - 3669692
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    ||||||||  ||| ||||||||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||||||||||     
T  3669857 gaggggagctagggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatg 3669758  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  3669757 agtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 3669692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 40518740 - 40518587
Alignment:
Q  27 gaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttact 125  Q
    ||||||| |||||||||||| |||||| ||| ||||||  |||  |||||| |||| ||||||||| | ||||| || || |||||| |||||||||| |    
T  40518740 gaggaccgtccacattgaggctagaacaaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatt 40518641  T
Q  126 tataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||    
T  40518640 tataaggtgttcaa-cctttacttttctatctgatgtgggacatataactcacac 40518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 147588 - 147456
Alignment:
Q  48 tagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaaccttta 146  Q
    |||||||||| ||||||  ||| ||||| | |||| ||||||||| ||||||||||||  |||||| |||||||||| ||||||||| ||||| ||||||    
T  147588 tagaactaccgcacaagcaagagagacgccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaa-ccttta 147490  T
Q  147 cttttctatccgatatgggacatataactcacac 180  Q
    || || |||||||| |||||||||||||||||||    
T  147489 ctcttttatccgatgtgggacatataactcacac 147456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 34835303 - 34835216
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||    
T  34835303 aaactttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatcggatgtgggacatataactcac 34835216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 3038289 - 3038443
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| ||| ||||||  ||| ||| | | |||| ||||||||| | ||||||||||| |||||| |||||| ||||    
T  3038289 ggaggaccgtccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttac 3038388  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  3038389 ttataaagtgttcaa-cctttactattttatccgatgtgggacatataactcacac 3038443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 9608839 - 9608750
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||  ||| |||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  9608839 aaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaa-cctttacttttctatccgatatgggacatataactcacac 9608750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 25561817 - 25561969
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc--aaactttaaggcaatgagtttattggtcctcttactt 126  Q
    ||||| ||||||| |||| |||| | ||| ||||||  ||| ||| ||| |||| ||||||  |||| ||||| |||||||||||| |||||||||||||    
T  25561817 ggaccttccacatcgaggctagagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttactt 25561916  T
Q  127 ataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  25561917 ataaggtgttc-aacgtttactcttttatccgatgtgggacatataactcacac 25561969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41972252 - 41972163
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||||| |||||| |||||| | ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  41972252 aaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaa-cctttacttttctatccgatgtgggacatataactcacac 41972163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 178
Target Start/End: Original strand, 70277 - 70425
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||| ||||||||||||||| ||| ||||||  ||| ||||||| |||| ||||| ||| | |||||||| || |||||| |||||||||||||||    
T  70277 gaccgtccgcattgaggttagaacaaccacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttat 70376  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    ||| | ||| ||| |||||| || |||||||| |||||||||||||||||    
T  70377 aagatgttc-aacatttactcttttatccgatgtgggacatataactcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 45121962 - 45122063
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||| | ||||||||||||||||||  |||||||||||||||| || ||| |||||||||| || ||| |||| ||||||||||||||||    
T  45121962 cactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttc-aacctttactattttatgcgatgtgggacatataactca 45122060  T
Q  178 cac 180  Q
    |||    
T  45122061 cac 45122063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 9309444 - 9309360
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||  |||||||||||||||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  9309444 ttaaggcaatgagtttaagggtcctcttacttataaggtgttc-aacatttactcttttatccgatgtgggacatataactcacac 9309360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 8918766 - 8918917
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| ||||||| ||| ||| |||| |  ||||||||||| |||| |||||| |||| ||||| ||||  |||||| ||||||||||||||    
T  8918766 ggaccgtccacatcgaggttaaaacaaccacacacgcaagaaagacgtcacactcttacccaaaaccttaagtcaataggtttatgggtcctcttactta 8918865  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||| |||||||||| | ||||| ||| |||||||| ||||||||||    
T  8918866 taaagtgttc-aacctttactctgctatctgatgtgggacatgtaactcacac 8918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 34835028 - 34834881
Alignment:
Q  33 catccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataag 131  Q
    ||||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||||||||||  ||| |||||||||||||    
T  34835028 catccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataag 34834929  T
Q  132 gttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || ||  |||||||||| || ||||| || |||||||||||||||||||    
T  34834928 gtgtt-taacctttactattttatccaatgtgggacatataactcacac 34834881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 45122067 - 45122210
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| |||| |||||| ||||||||||  ||| ||||  | |||| ||||||||| | |||||  ||||||||||| ||| |||||||||||||||| |    
T  45122067 cacatcgaggctagaacaaccccacaagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgt 45122166  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || |||||||||| || |||||||| || ||||||||||||||||    
T  45122167 tc-aacctttactattttatccgatgtgagacatataactcacac 45122210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 43398132 - 43398224
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctc---ttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| ||||| |||||||   ||| ||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||    
T  43398132 aaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaa-cctttacttttctatccgatatgagatatataactcacac 43398224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 1013935 - 1014024
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  1013935 aaactctaaggcaatgggtttattggtcctcttacttatagggtgttc-aacttttactattttatccgatgtggaacatataactcacac 1014024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 3670210 - 3670065
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||| |||  |||||| ||||||| ||||||||||||    
T  3670210 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggt 3670111  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     || ||||||||||| || |||||||| |||||||||||||||||||    
T  3670110 gtt-aaacctttactattttatccgatgtgggacatataactcacac 3670065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 30359425 - 30359276
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    |||||||||||||||| || ||| ||  ||||||| ||| ||||  | |||| ||||||||| | ||||||| ||| |||||| ||||||||| ||||||    
T  30359425 accatccacattgaggctaaaacaacatcacaagaaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttata 30359326  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  30359325 aggtgttcaa-catttactcttttatccgatgtgagacatataactcacac 30359276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 34835569 - 34835481
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc-cgatatgggacatataactcac 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||  ||  |||||||||||||||||    
T  34835569 aaactttaaggcaatgagtttatgggtcctcttacttataaggtgtt-aaacctttactattttatcgggacgtgggacatataactcac 34835481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 34835835 - 34835747
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc-cgatatgggacatataactcac 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||  ||  |||||||||||||||||    
T  34835835 aaactttaaggcaatgagtttatgggtcctcttacttataaggtgtt-aaacctttactattttatcgggacgtgggacatataactcac 34835747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 5420745 - 5420663
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 173  Q
    |||| ||||||||||| ||||||  ||||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||||||    
T  5420745 aaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaa-cctttactattctatccgatgtgggacatataa 5420663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 33113419 - 33113517
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | |||||||||||||||||| ||||||||||||||||||   ||| |||||||||| || |||||||| | ||||||||||||||    
T  33113419 cactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttc-aacctttactattttatccgatgtaggacatataactca 33113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 1014249 - 1014398
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| |||| |||||| ||| ||||||   || ||||  | |||| ||||||||| |||||||| || |||||||  ||||||||||||||||    
T  1014249 accatccacatcgaggctagaacaaccgcacaagcaggagagacaccacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttata 1014348  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||| |||||||||| || |||| ||| |  ||||||||||||||||    
T  1014349 aggtgttc-aacctttactattttatctgatgtatgacatataactcacac 1014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 45122785 - 45122649
Alignment:
Q  24 caggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctctt 122  Q
    |||| ||||| ||||||| |||| | |||| ||| ||||||  ||| ||||| | ||||  |||||||| | ||||| |||||||||||| |||||||||    
T  45122785 cagggggaccttccacatcgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctctt 45122686  T
Q  123 acttataaggttttcaaacctttacttttctatccgat 160  Q
    ||||||||||| ||| |||||||||| || ||||||||    
T  45122685 acttataaggtgttc-aacctttactattttatccgat 45122649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 9482676 - 9482755
Alignment:
Q  98 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||| || ||| |||||||||||||    
T  9482676 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatcccatgtggaacatataactcac 9482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 41416252 - 41416322
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 18372787 - 18372852
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  18372787 ggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgtgacatataactcacac 18372852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 20870561 - 20870718
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttatt 113  Q
    |||||||| |||||||||| |||| ||  |||||||||| ||| ||||||  ||| ||||  | |||| ||| ||||| | |||||||| || ||||||     
T  20870561 gaggggagccaggaggaccgtccatatcaaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatg 20870660  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    |||||||||||||||||| | ||| |||||||||| || |||| ||| ||| |||||||    
T  20870661 ggtcctcttacttataagatgttc-aacctttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 40579570 - 40579659
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||| ||||||| |||||||||||||||||||| ||| |||||||||| || ||||| |||||  |||||||| ||||||    
T  40579570 aaaccttaaagcaataagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatatgaaacatataattcacac 40579659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 4154739 - 4154819
Alignment:
Q  99 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||| |||||| | |||||||| || ||||| |||  ||||||||||| ||| |||||||||||||||||||    
T  4154739 ggcaatgagtttatgggtcctttcacttataaagtgttcaa-cctccacttttctatcagatgtgggacatataactcacac 4154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 6876932 - 6877016
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac-atataactcacac 180  Q
    |||| |||||||| ||| |||| ||||| ||||||||| ||||| ||||||||||| |||||||| |||||| |||||||||||||    
T  6876932 taagacaatgagtgtatgggtcatcttatttataaggtgttcaa-cctttacttttttatccgatgtgggactatataactcacac 6877016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 18373004 - 18373084
Alignment:
Q  99 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||  ||||||||| ||||||||| ||| |||||||||| || |||||||  |||||||||||| ||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttc-aacctttactattttatccgaagtgggacatataaatcacac 18373084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 30441235 - 30441086
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataa--- 130  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||| || ||||||||||||||       
T  30441235 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataatta 30441136  T
Q  131 -ggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||| ||||| |||||||| || || ||||| |||||||||||||||||||    
T  30441135 aggtgttcaa-cctttactattttagccgatgtgggacatataactcacac 30441086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 32305647 - 32305503
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttatt 113  Q
    ||||||||||||| ||||| |||||||  |||||||||| ||  || |||  | ||||||| | |||| ||| ||||| | |||||| |||| ||||||     
T  32305647 gaggggagtcagggggaccgtccacatcaaggttagaacaactgcataagtaataaagacgccacactcttatccaaaatcttaaggtaatgggtttata 32305548  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccga 159  Q
    |||| ||||||||||||||| ||| |||||||||| || |||||||    
T  32305547 ggtcttcttacttataaggtgttc-aacctttactattttatccga 32305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 1514003 - 1514065
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| ||||| ||||||||||    
T  1514003 ggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggatatataactca 1514065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 18372004 - 18372142
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    |||||||||| |||| | ||| |||||| |||| | ||  | |||| ||||||||| | |||| ||||||||||||| | |||||||||||||||||| |    
T  18372004 cacattgaggctagagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgt 18372103  T
Q  136 tcaaacctttacttttctatccgatatgggacatataact 175  Q
    || |||||||||| || |||  ||| ||| ||||||||||    
T  18372104 tc-aacctttactattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 40518227 - 40518074
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||  ||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | |||||||| || |||||| |||||  |||||||    
T  40518227 ggaccgtccacatcaaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggtttatgggtccatttactta 40518128  T
Q  128 taaggttttcaaacctttac--ttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||  |||| ||||| || ||| |||||||||||||||    
T  40518127 taaggtgttc-aacctttacttttttttatccaatgtggaacatataactcacac 40518074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 9483251 - 9483320
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 160  Q
    |||| ||||| ||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||||||    
T  9483251 aaaccttaagacaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 18372344 - 18372409
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  18372344 ggtcttcttacttataaggtgttcaa-cctttactattttatccgatgtgagacatataactcacac 18372409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 37544498 - 37544643
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||||||||  | |||| ||||||||| | |||| | ||||  ||||| ||||||||| ||||||| ||    
T  37544498 tccacatcgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgt 37544597  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || |||||||| || ||| ||||||||||||    
T  37544598 gttcaa-cctttactattttatccgatgtgcgacttataactcacac 37544643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 9620745 - 9620829
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| |||||||| |||||||| ||  || ||| | |||||||||||| | | || ||||||||||||||||    
T  9620745 ttaaggcaatgagtttatgggtcctctcacttataaagtgatc-aacttctacttttctatctgttgtgagacatataactcacac 9620829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 25561736 - 25561792
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  25561736 ctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 4154350 - 4154432
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||||||||||||||| |||| ||| |||||||| || ||||| |||  ||||||||||| ||| | ||||||||||||||||    
T  4154350 ttaaggcaatgagtttatgggtc-tctcacttataaagtgttcaa-cctccacttttctatctgatgtaggacatataactcaca 4154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 5916023 - 5915928
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctctta 123  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||||||||||    
T  5916023 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta 5915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 6651662 - 6651555
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattgg 115  Q
    ||||||| ||| ||||||||||||| ||||||||||| | | ||||||  ||| ||||  | |||| |||||| |||| |||||||||||| ||||| ||    
T  6651662 ggggagttagggggaccatccacatcgaggttagaacaatcgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgaatttatggg 6651563  T
Q  116 tcctctta 123  Q
    | ||||||    
T  6651562 ttctctta 6651555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 9609179 - 9609114
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc 156  Q
    |||| ||||||| ||| |||||| |||| ||||||||||||| | ||| ||||||||||||||||||    
T  9609179 aaacattaaggcgatgggtttatgggtcatcttacttataagatgttc-aacctttacttttctatc 9609114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 18380081 - 18380170
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||| | || |||||| || || |||||||||||||| ||||| |||||||| || ||| |||| ||||| |||||||||||||    
T  18380081 aaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaa-cctttactattttattcgatgtgggatatataactcacac 18380170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 30359715 - 30359614
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | ||||||  ||| ||||||  ||||||||||||||||||| ||| ||| |||||| || |||| ||| || |||||||||||||    
T  30359715 cactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttc-aacttttactcttttatctgatgtgagacatataactca 30359617  T
Q  178 cac 180  Q
    |||    
T  30359616 cac 30359614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 6731950 - 6731909
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  6731950 aacctttactattttatccgatgtgggacatataactcacac 6731909  T

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Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 18372676 - 18372755
Alignment:
Q  99 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| ||||||  |||||||||||||||| || ||| |||||||||| || ||||||| |||| |||||||| ||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttataa-gtgttc-aacctttactattttatccgaaatggaacatataaatcacac 18372755  T

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Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 45123052 - 45123011
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  45123052 aacctttactattttatccgatgtgggacatataactcacac 45123011  T

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Target: scaffold0078 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 5446 - 5362
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||||    
T  5446 ttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactgttctatccgatgtggaacatataactcacac 5362  T

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Target: scaffold0078; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 5070 - 4987
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| |||| | ||||||||||| | || ||||||||||| |||| |||||| || ||||||||| ||||||    
T  5070 taaggcaatgagtttatgggtctttttacttataagatatt-aaacctttactgttctctccgatgtgagacatataattcacac 4987  T

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Target: scaffold0702 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 516 - 667
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||  ||| | ||||  ||||||||  | |||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  516 ggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 615  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  616 taaggtgttc-aacctttactcttttaaccgatgtgggacatataactcacac 667  T

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Target: scaffold0702; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 229 - 295
Alignment:
Q  113 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  229 tggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 295  T

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Target: scaffold0734 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 5866 - 5782
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||||||||||    
T  5866 ttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgcgacatataactcacac 5782  T

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Target: scaffold0734; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 5546 - 5401
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa--ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    |||||| |||| | |||| ||||||||||  ||| ||||  | |||| |||||||||  ||||||| ||||  |||||| || |||||||||||||||||    
T  5546 ccacatcgaggcttgaacaaccccacaagcaagagagacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggt 5447  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || |||||||| | |||||||||||||||||    
T  5446 gttcaa-cctttactattttatccgatgtaggacatataactcacac 5401  T

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Target: scaffold0391 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 1170 - 1259
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| ||||||  ||||| || |||||||||| ||||| |||||||| || ||||| || |||||||||||||||||||    
T  1170 aaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaa-cctttactcttttatccaatgtgggacatataactcacac 1259  T

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Target: scaffold0391; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 3097 - 3138
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  3097 aacctttactcttttatccgatgtgggacatataactcacac 3138  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 17520 - 17609
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||| |||||| |||||||||||||| ||||| ||| |||||||||| || |||| ||| || ||||||||||||||||    
T  17520 aaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttc-aacctttactattttatctgatgtgtgacatataactcacac 17609  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 47516 - 47365
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| ||||||||||| ||| | ||||  ||| ||||  | || | ||||||||| ||||||||||||| |||||| | | ||||||||||    
T  47516 ggaccgtccacatcgaggttagaacaaccgcgcaagcaagagagacaccacatttttacccaaaactttaaggcaatgggtttatggattctcttactta 47417  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||| ||||||| || |||| ||| || ||||| ||| ||||||    
T  47416 taaggtgttcaaa-ctttactattttatcggatgtgagacatttaattcacac 47365  T

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Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 10192 - 10264
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||||| ||| ||| |||||  || |||||||| || ||||||||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttc-aacttttaccattttatccgatgtgagacatataactcacac 10264  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 39877 - 39843
Alignment:
Q  146 acttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||| |||||||||||||||||||    
T  39877 acttttctatccgatgtgggacatataactcacac 39843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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