View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20298_low_13 (Length: 417)

Name: NF20298_low_13
Description: NF20298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20298_low_13
NF20298_low_13
[»] chr1 (50 HSPs)
chr1 (37-304)||(44685327-44685605)
chr1 (35-180)||(66480-66625)
chr1 (66-180)||(22077534-22077648)
chr1 (84-179)||(24132043-24132137)
chr1 (16-181)||(3537589-3537753)
chr1 (15-180)||(26661510-26661675)
chr1 (90-180)||(44290889-44290978)
chr1 (29-180)||(44290460-44290611)
chr1 (90-180)||(3550725-3550814)
chr1 (90-180)||(5320029-5320118)
chr1 (90-180)||(17294582-17294671)
chr1 (90-180)||(24600378-24600467)
chr1 (90-180)||(41142377-41142466)
chr1 (90-180)||(41156996-41157085)
chr1 (29-160)||(22077112-22077243)
chr1 (90-169)||(66151-66230)
chr1 (30-180)||(48588491-48588641)
chr1 (90-180)||(32594780-32594869)
chr1 (31-180)||(34364512-34364661)
chr1 (31-180)||(34364930-34365079)
chr1 (90-180)||(41184489-41184578)
chr1 (107-180)||(3537228-3537300)
chr1 (29-180)||(31767163-31767314)
chr1 (26-180)||(40082412-40082565)
chr1 (97-180)||(41157380-41157462)
chr1 (346-401)||(44685231-44685285)
chr1 (26-175)||(3875330-3875479)
chr1 (35-179)||(5575110-5575252)
chr1 (90-180)||(30630702-30630791)
chr1 (90-180)||(39066264-39066353)
chr1 (90-180)||(50052087-50052176)
chr1 (107-180)||(21378122-21378194)
chr1 (95-180)||(29798204-29798288)
chr1 (35-180)||(22793283-22793429)
chr1 (90-180)||(37556116-37556205)
chr1 (109-180)||(45084387-45084457)
chr1 (65-158)||(4956218-4956311)
chr1 (98-180)||(22077900-22077981)
chr1 (90-180)||(26661962-26662051)
chr1 (29-177)||(14318875-14319023)
chr1 (29-180)||(34649443-34649594)
chr1 (66-180)||(1188627-1188741)
chr1 (37-180)||(9955912-9956057)
chr1 (90-180)||(41759488-41759577)
chr1 (107-180)||(37850681-37850753)
chr1 (29-180)||(11977285-11977436)
chr1 (114-180)||(37555735-37555800)
chr1 (90-180)||(38804419-38804508)
chr1 (102-175)||(5528830-5528902)
chr1 (108-177)||(45839635-45839707)
[»] chr7 (44 HSPs)
chr7 (15-180)||(1085604-1085769)
chr7 (15-180)||(7517585-7517750)
chr7 (29-180)||(30244275-30244426)
chr7 (29-180)||(37533013-37533163)
chr7 (37-180)||(45434641-45434784)
chr7 (90-180)||(16569201-16569290)
chr7 (90-180)||(16596372-16596461)
chr7 (29-180)||(30245082-30245229)
chr7 (90-180)||(8128505-8128594)
chr7 (90-180)||(22566726-22566815)
chr7 (29-180)||(22567041-22567191)
chr7 (96-180)||(28301613-28301696)
chr7 (90-177)||(24177443-24177529)
chr7 (14-180)||(45433246-45433412)
chr7 (90-180)||(7554030-7554119)
chr7 (90-180)||(20599319-20599408)
chr7 (90-179)||(23441-23529)
chr7 (17-177)||(41854643-41854802)
chr7 (90-178)||(11845198-11845285)
chr7 (90-180)||(6054565-6054654)
chr7 (90-180)||(29157570-29157659)
chr7 (26-179)||(34218033-34218186)
chr7 (90-180)||(36939797-36939886)
chr7 (36-180)||(40094783-40094927)
chr7 (95-180)||(41910663-41910747)
chr7 (65-180)||(118339-118454)
chr7 (90-180)||(43241500-43241589)
chr7 (90-170)||(1085312-1085391)
chr7 (29-180)||(30032572-30032723)
chr7 (29-180)||(37533366-37533517)
chr7 (90-177)||(19122740-19122825)
chr7 (117-180)||(30245499-30245561)
chr7 (117-180)||(30255344-30255406)
chr7 (90-180)||(14681515-14681604)
chr7 (114-180)||(30244706-30244771)
chr7 (29-139)||(30253537-30253644)
chr7 (90-180)||(40230355-40230444)
chr7 (90-180)||(47129100-47129189)
chr7 (116-180)||(36109007-36109070)
chr7 (107-173)||(36534865-36534930)
chr7 (90-180)||(36622965-36623054)
chr7 (90-180)||(45754721-45754809)
chr7 (90-179)||(4124152-4124240)
chr7 (50-180)||(24838724-24838855)
[»] chr5 (41 HSPs)
chr5 (15-180)||(18603108-18603273)
chr5 (36-180)||(26074617-26074761)
chr5 (29-180)||(32487399-32487549)
chr5 (15-180)||(1028505-1028670)
chr5 (15-172)||(3295333-3295489)
chr5 (29-180)||(36568571-36568720)
chr5 (29-180)||(36492219-36492370)
chr5 (33-180)||(38427553-38427699)
chr5 (29-180)||(40296317-40296468)
chr5 (90-180)||(299494-299583)
chr5 (90-180)||(6224201-6224290)
chr5 (15-180)||(6500456-6500620)
chr5 (31-180)||(26590914-26591063)
chr5 (79-179)||(9498706-9498806)
chr5 (35-175)||(34753033-34753173)
chr5 (90-179)||(41170640-41170728)
chr5 (29-178)||(11416979-11417128)
chr5 (43-180)||(13415776-13415913)
chr5 (90-180)||(26075226-26075315)
chr5 (15-180)||(27502024-27502189)
chr5 (35-180)||(35150012-35150156)
chr5 (79-180)||(41632787-41632888)
chr5 (36-180)||(26074155-26074299)
chr5 (35-180)||(624201-624346)
chr5 (90-180)||(6500828-6500916)
chr5 (107-180)||(26074323-26074395)
chr5 (29-180)||(15370104-15370255)
chr5 (29-180)||(25327940-25328091)
chr5 (97-172)||(3295086-3295160)
chr5 (26-139)||(15370447-15370561)
chr5 (95-173)||(33747783-33747860)
chr5 (90-180)||(42508617-42508706)
chr5 (29-180)||(623823-623974)
chr5 (97-180)||(31509628-31509710)
chr5 (90-180)||(2411012-2411101)
chr5 (95-180)||(24489275-24489357)
chr5 (90-180)||(26074846-26074935)
chr5 (90-180)||(29549319-29549408)
chr5 (118-180)||(300964-301025)
chr5 (90-180)||(42405660-42405749)
chr5 (139-180)||(12662764-12662805)
[»] chr3 (50 HSPs)
chr3 (15-180)||(15772859-15773024)
chr3 (16-180)||(42342377-42342541)
chr3 (29-179)||(33803254-33803404)
chr3 (26-180)||(43346790-43346944)
chr3 (29-180)||(25739427-25739578)
chr3 (15-180)||(12114550-12114715)
chr3 (90-180)||(21832407-21832496)
chr3 (15-180)||(15773197-15773364)
chr3 (33-176)||(39934961-39935104)
chr3 (90-180)||(22304574-22304663)
chr3 (15-180)||(25755399-25755564)
chr3 (90-180)||(32462964-32463054)
chr3 (90-180)||(35946527-35946616)
chr3 (77-180)||(1634364-1634468)
chr3 (29-180)||(37990641-37990792)
chr3 (29-180)||(37990979-37991130)
chr3 (34-180)||(49336693-49336840)
chr3 (36-166)||(41359774-41359904)
chr3 (15-180)||(29644569-29644734)
chr3 (90-180)||(45901718-45901808)
chr3 (71-180)||(52634681-52634789)
chr3 (29-180)||(29644904-29645055)
chr3 (29-172)||(32589716-32589859)
chr3 (90-180)||(33175725-33175817)
chr3 (26-132)||(42342089-42342196)
chr3 (79-180)||(4823660-4823761)
chr3 (95-177)||(7767383-7767464)
chr3 (90-180)||(39389075-39389164)
chr3 (95-180)||(9240154-9240238)
chr3 (115-180)||(50612541-50612605)
chr3 (115-180)||(54017905-54017969)
chr3 (107-175)||(42584903-42584970)
chr3 (100-180)||(51886566-51886645)
chr3 (116-180)||(53118064-53118127)
chr3 (30-180)||(45395656-45395806)
chr3 (90-180)||(8327909-8327998)
chr3 (114-180)||(31190022-31190087)
chr3 (90-180)||(39336293-39336382)
chr3 (19-180)||(54018190-54018351)
chr3 (90-178)||(3135137-3135224)
chr3 (116-180)||(37726509-37726572)
chr3 (79-133)||(52634991-52635046)
chr3 (146-180)||(12747871-12747905)
chr3 (90-180)||(32462622-32462712)
chr3 (95-180)||(33362362-33362449)
chr3 (118-180)||(36986040-36986101)
chr3 (118-180)||(37011479-37011540)
chr3 (139-180)||(22304251-22304292)
chr3 (107-180)||(39914257-39914329)
chr3 (90-178)||(3384330-3384417)
[»] chr6 (37 HSPs)
chr6 (16-180)||(10074352-10074516)
chr6 (37-180)||(3409264-3409407)
chr6 (29-180)||(29518508-29518659)
chr6 (29-180)||(29518925-29519076)
chr6 (29-180)||(32741184-32741335)
chr6 (31-180)||(2579496-2579645)
chr6 (29-180)||(2377759-2377910)
chr6 (90-178)||(10074055-10074142)
chr6 (61-180)||(32460614-32460733)
chr6 (90-180)||(2378131-2378220)
chr6 (35-180)||(3058231-3058376)
chr6 (90-180)||(14748402-14748491)
chr6 (79-179)||(9062402-9062501)
chr6 (15-180)||(10073604-10073767)
chr6 (90-180)||(10911570-10911660)
chr6 (29-179)||(16454913-16455063)
chr6 (90-180)||(35210209-35210298)
chr6 (16-180)||(16107683-16107847)
chr6 (29-180)||(2579874-2580025)
chr6 (29-180)||(16454580-16454731)
chr6 (37-180)||(26544054-26544197)
chr6 (29-179)||(1127366-1127516)
chr6 (90-180)||(3415463-3415552)
chr6 (90-180)||(6999860-6999949)
chr6 (95-180)||(16108068-16108152)
chr6 (29-180)||(2578445-2578595)
chr6 (90-180)||(593773-593862)
chr6 (43-180)||(1950201-1950338)
chr6 (15-180)||(2578823-2578987)
chr6 (15-179)||(2843560-2843725)
chr6 (29-180)||(3409665-3409816)
chr6 (108-180)||(5832108-5832179)
chr6 (101-180)||(17135144-17135222)
chr6 (90-180)||(1846753-1846842)
chr6 (90-179)||(5958667-5958755)
chr6 (95-180)||(6071137-6071221)
chr6 (90-174)||(12092546-12092629)
[»] chr4 (58 HSPs)
chr4 (29-180)||(36629242-36629393)
chr4 (84-180)||(49076504-49076599)
chr4 (90-180)||(3244513-3244602)
chr4 (90-180)||(41370362-41370451)
chr4 (96-180)||(16888884-16888967)
chr4 (27-180)||(39792858-39793011)
chr4 (90-180)||(2740705-2740794)
chr4 (35-180)||(32941129-32941274)
chr4 (90-180)||(52884892-52884981)
chr4 (90-180)||(55933186-55933275)
chr4 (29-180)||(16889536-16889687)
chr4 (17-180)||(25483341-25483504)
chr4 (30-180)||(3340812-3340962)
chr4 (79-170)||(54108928-54109018)
chr4 (90-180)||(2741076-2741165)
chr4 (90-180)||(4955379-4955468)
chr4 (90-180)||(34646711-34646800)
chr4 (30-179)||(51768061-51768210)
chr4 (90-180)||(52884700-52884789)
chr4 (95-180)||(760194-760278)
chr4 (79-180)||(41707515-41707615)
chr4 (90-178)||(50630817-50630904)
chr4 (29-179)||(1731647-1731797)
chr4 (18-180)||(22183253-22183415)
chr4 (30-180)||(54017596-54017746)
chr4 (90-180)||(49880165-49880254)
chr4 (114-180)||(54741264-54741329)
chr4 (29-173)||(22028369-22028515)
chr4 (29-180)||(39404023-39404174)
chr4 (29-176)||(44620362-44620509)
chr4 (90-170)||(45496820-45496899)
chr4 (113-180)||(10245925-10245991)
chr4 (29-132)||(43827492-43827595)
chr4 (90-180)||(22028023-22028112)
chr4 (65-134)||(31691202-31691272)
chr4 (90-180)||(36572024-36572113)
chr4 (90-180)||(39404403-39404492)
chr4 (90-180)||(49302909-49303000)
chr4 (36-180)||(50002431-50002575)
chr4 (114-175)||(54343087-54343147)
chr4 (95-179)||(20826223-20826306)
chr4 (29-180)||(36608661-36608812)
chr4 (36-170)||(54108551-54108686)
chr4 (67-180)||(3341133-3341246)
chr4 (90-160)||(18932811-18932880)
chr4 (90-176)||(44621011-44621096)
chr4 (107-180)||(44620665-44620737)
chr4 (107-179)||(20825842-20825913)
chr4 (37-180)||(34004593-34004734)
chr4 (90-166)||(54936215-54936290)
chr4 (118-177)||(44620304-44620362)
chr4 (90-180)||(28034234-28034323)
chr4 (35-180)||(49076837-49076981)
chr4 (102-180)||(50459726-50459803)
chr4 (114-172)||(54017788-54017845)
chr4 (115-180)||(3700370-3700434)
chr4 (116-180)||(4390189-4390252)
chr4 (115-179)||(6975543-6975606)
[»] chr2 (51 HSPs)
chr2 (29-180)||(42514654-42514805)
chr2 (48-180)||(28254260-28254390)
chr2 (35-180)||(36005888-36006032)
chr2 (30-179)||(40679632-40679781)
chr2 (90-180)||(41283539-41283628)
chr2 (17-180)||(35580714-35580876)
chr2 (79-180)||(28531366-28531467)
chr2 (35-180)||(36178613-36178758)
chr2 (30-180)||(962603-962753)
chr2 (26-180)||(15880268-15880422)
chr2 (29-180)||(6421390-6421541)
chr2 (29-180)||(37105929-37106080)
chr2 (26-180)||(37106193-37106347)
chr2 (90-180)||(5542689-5542778)
chr2 (90-180)||(14745731-14745820)
chr2 (16-180)||(40733522-40733687)
chr2 (96-180)||(31899496-31899579)
chr2 (95-180)||(16542454-16542538)
chr2 (109-180)||(7598614-7598684)
chr2 (30-174)||(40163375-40163520)
chr2 (79-180)||(5543050-5543151)
chr2 (29-180)||(6712981-6713133)
chr2 (107-180)||(38796299-38796371)
chr2 (90-169)||(28254176-28254254)
chr2 (90-177)||(37895125-37895211)
chr2 (90-180)||(7598233-7598322)
chr2 (90-180)||(12529092-12529181)
chr2 (90-180)||(38796684-38796773)
chr2 (103-180)||(1769897-1769973)
chr2 (90-180)||(31468814-31468899)
chr2 (79-178)||(15511547-15511646)
chr2 (59-174)||(30313189-30313303)
chr2 (95-179)||(37894761-37894844)
chr2 (90-180)||(30323469-30323558)
chr2 (90-180)||(33561515-33561604)
chr2 (90-180)||(33731653-33731742)
chr2 (90-180)||(36178333-36178422)
chr2 (17-169)||(6422126-6422278)
chr2 (90-179)||(14745358-14745446)
chr2 (29-180)||(29676908-29677064)
chr2 (79-167)||(36178223-36178311)
chr2 (107-180)||(37632678-37632750)
chr2 (90-177)||(9231257-9231343)
chr2 (117-180)||(40733888-40733950)
chr2 (17-130)||(3673122-3673236)
chr2 (90-180)||(29874087-29874176)
chr2 (139-180)||(36785675-36785716)
chr2 (97-177)||(29676543-29676622)
chr2 (59-174)||(29873569-29873684)
chr2 (72-179)||(33953816-33953923)
chr2 (122-170)||(42515031-42515078)
[»] chr8 (51 HSPs)
chr8 (15-180)||(3669692-3669857)
chr8 (27-180)||(40518587-40518740)
chr8 (48-180)||(147456-147588)
chr8 (90-178)||(34835216-34835303)
chr8 (26-180)||(3038289-3038443)
chr8 (90-180)||(9608750-9608839)
chr8 (29-180)||(25561817-25561969)
chr8 (90-180)||(41972163-41972252)
chr8 (30-178)||(70277-70425)
chr8 (79-180)||(45121962-45122063)
chr8 (95-180)||(9309360-9309444)
chr8 (29-180)||(8918766-8918917)
chr8 (33-180)||(34834881-34835028)
chr8 (37-180)||(45122067-45122210)
chr8 (90-180)||(43398132-43398224)
chr8 (90-180)||(1013935-1014024)
chr8 (35-180)||(3670065-3670210)
chr8 (31-180)||(30359276-30359425)
chr8 (90-178)||(34835481-34835569)
chr8 (90-178)||(34835747-34835835)
chr8 (90-173)||(5420663-5420745)
chr8 (79-177)||(33113419-33113517)
chr8 (31-180)||(1014249-1014398)
chr8 (24-160)||(45122649-45122785)
chr8 (98-178)||(9482676-9482755)
chr8 (107-178)||(41416252-41416322)
chr8 (114-180)||(18372787-18372852)
chr8 (15-172)||(20870561-20870718)
chr8 (90-180)||(40579570-40579659)
chr8 (99-180)||(4154739-4154819)
chr8 (96-180)||(6876932-6877016)
chr8 (99-180)||(18373004-18373084)
chr8 (35-180)||(30441086-30441235)
chr8 (15-159)||(32305503-32305647)
chr8 (114-177)||(1514003-1514065)
chr8 (37-175)||(18372004-18372142)
chr8 (29-180)||(40518074-40518227)
chr8 (90-160)||(9483251-9483320)
chr8 (114-180)||(18372344-18372409)
chr8 (35-180)||(37544498-37544643)
chr8 (95-180)||(9620745-9620829)
chr8 (118-175)||(25561736-25561792)
chr8 (95-179)||(4154350-4154432)
chr8 (29-123)||(5915928-5916023)
chr8 (17-123)||(6651555-6651662)
chr8 (90-156)||(9609114-9609179)
chr8 (90-180)||(18380081-18380170)
chr8 (79-180)||(30359614-30359715)
chr8 (139-180)||(6731909-6731950)
chr8 (99-180)||(18372676-18372755)
chr8 (139-180)||(45123011-45123052)
[»] scaffold0078 (2 HSPs)
scaffold0078 (95-180)||(5362-5446)
scaffold0078 (96-180)||(4987-5070)
[»] scaffold0702 (2 HSPs)
scaffold0702 (29-180)||(516-667)
scaffold0702 (113-180)||(229-295)
[»] scaffold0734 (2 HSPs)
scaffold0734 (95-180)||(5782-5866)
scaffold0734 (36-180)||(5401-5546)
[»] scaffold0391 (2 HSPs)
scaffold0391 (90-180)||(1170-1259)
scaffold0391 (139-180)||(3097-3138)
[»] scaffold0171 (1 HSPs)
scaffold0171 (90-180)||(17520-17609)
[»] scaffold0027 (1 HSPs)
scaffold0027 (29-180)||(47365-47516)
[»] scaffold0504 (1 HSPs)
scaffold0504 (107-180)||(10192-10264)
[»] scaffold0113 (1 HSPs)
scaffold0113 (146-180)||(39843-39877)


Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 37 - 304
Target Start/End: Complemental strand, 44685605 - 44685327
Alignment:
Q  37 cacattgaggttagaactacccc-acaagagagaaagacgtcgcactgttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44685605 cacatcgaggttagaactacccccacaagagagaaagacgtcacactgttacccaaacattaaggcaatgagtttattggtcctcttacttataaggttt 44685506  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcac-----------acgcgtgttgtgtgtgataggaaaataccacgtatgtacaccaaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||||           || ||| ||||||||||||||||||||| |||||||||||||||||    
T  44685505 tcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacacgt-ttgtgtgtgataggaaaatactacgtatgtacaccaaaa 44685407  T
Q  225 tgaattgtggacatcattgattcaagtatagaagaatacacccaatccacaaaatatttaactaactcaccttcttttgc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44685406 tgaattgtggacatcattgattcaagtatagaagaatacacccaatccacaaaatatttaactaactcaccttcttttgc 44685327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 66480 - 66625
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    |||||||||||| |||||| ||| |||||| |||| |||||    ||| ||||||||| | ||||||| ||  |||||| | ||||||||||||||||||    
T  66480 tccacattgaggctagaacaaccgcacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggt 66579  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||||||||||||||||||| |||||||||||||||    
T  66580 gttcaa-cctttacttttctatccgatatggaacatataactcacac 66625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 22077534 - 22077648
Alignment:
Q  66 gagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgg 164  Q
    |||| ||||| | |||| ||||||||| | ||||||| | |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||     
T  22077534 gagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtga 22077632  T
Q  165 gacatataactcacac 180  Q
    ||||||||||||||||    
T  22077633 gacatataactcacac 22077648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 24132043 - 24132137
Alignment:
Q  84 ttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||||||| |||||||||||||||||| | ||| |||| ||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||    
T  24132043 ttacccaaaccttaaggcaatgagtttatggatccccttatttataaggtgttcaa-cctttacttttctatccgatgagggacatataactcaca 24132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 3537589 - 3537753
Alignment:
Q  16 aggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattg 114  Q
    ||||||| |||| ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||| ||||| |||||| |    
T  3537589 aggggagccagg-ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttatag 3537687  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacg 181  Q
    ||||||||||| ||||||| ||||| |||||||| || |||||||| |||||||||||||| |||||    
T  3537688 gtcctcttactcataaggtgttcaa-cctttactattttatccgatgtgggacatataactaacacg 3537753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 26661510 - 26661675
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||| |||| ||| ||||| |||| || |||| | |||| ||| |||||| |||| ||||  | |||| ||||||||| | ||||||||||||||||||     
T  26661510 gaggagagttagggggaccgtccatatcgaggcttgaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatg 26661609  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||||||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  26661610 ggtcctctcacttataaggtgttc-aacctttactcttttacccgatgtgggacatataactcacac 26661675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 44290889 - 44290978
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  44290889 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataactcacac 44290978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 44290460 - 44290611
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| |||  |||||  ||||||||  |  ||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  44290460 ggaccgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 44290559  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| | ||| |||||||||| || |||||||| |||||||||||||||||||    
T  44290560 taagatgttc-aacctttactattttatccgatgtgggacatataactcacac 44290611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 3550814 - 3550725
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  3550814 aaactttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 3550725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 5320029 - 5320118
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||| ||| |||||||||||||||    
T  5320029 aaaccttaaggctatgagtttatgggtcctctcacttataaggtgttc-aacttttacttttctatccgatgtggaacatataactcacac 5320118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 17294671 - 17294582
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  17294671 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 17294582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 24600378 - 24600467
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||||||||||  || |||||||||||||  | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24600378 aaaccttaagacaatgagtttatgagttctcttacttataatatgttcaa-cctttacttttctatccgatatgggacatataactcacac 24600467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41142466 - 41142377
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||| ||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  41142466 aaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 41142377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41157085 - 41156996
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||||| |||||||||||||| ||||||    
T  41157085 aaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgttatgggacatataattcacac 41156996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 22077112 - 22077243
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| | |||| ||| || ||| |||  ||||||| |||| ||| ||||| | ||| |||||||||||||| ||||||||||||||    
T  22077112 ggaccgtccacatcgaggcttgaacaaccgcataagtgagggagacgtcacactcttatccaaaaccttagggcaatgagtttatgggtcctcttactta 22077211  T
Q  128 taaggttttcaaacctttacttttctatccgat 160  Q
    |||||| ||| ||||||||||||||||||||||    
T  22077212 taaggtattc-aacctttacttttctatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 66151 - 66230
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 169  Q
    |||| ||||||| ||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||| || |||||    
T  66151 aaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacat 66230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 48588491 - 48588641
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||||| ||| ||||||  ||| ||||  |||||| ||||||||| | |||||||||||| ||||  |||| ||||||||||    
T  48588491 gaccgtccacatcgaggctagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttat 48588590  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||| |||||||||| || |||||||| | ||||||| |||||||||    
T  48588591 aaggtgttc-aacctttactattttatccgatgtcggacatagaactcacac 48588641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 32594780 - 32594869
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| | |||||||||||||||||    
T  32594780 aaaccttaagacaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtaggacatataactcacac 32594869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 34364661 - 34364512
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| |||| |||| | ||| || ||| |||| |||| || |||| ||||||||| | ||||||| ||| |||||  | ||||||||||||||    
T  34364661 accatccacatcgaggctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttata 34364562  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  34364561 aggtgttcaa-cctttactattttatccgatgtgagacatataactcacac 34364512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 34365079 - 34364930
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| ||||||||| | ||  || ||| |||| ||||  | |||| ||||||||| | ||||||| ||| |||||| ||||||||||||||||    
T  34365079 accatccacatcgaggttagagcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttata 34364980  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||| |||||||| | || |||||||| || ||||||||||||||||    
T  34364979 aggtgttc-aacctttattattttatccgatgtgtgacatataactcacac 34364930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 41184489 - 41184578
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||||| || ||||||||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttc-aacctttactattttatccgatgtgagacatataactcacac 41184578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 3537228 - 3537300
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 3537300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 31767163 - 31767314
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||  |||||| ||| ||||||  ||| ||||||| |||| ||||||||| | |||||||| |  ||| || ||||||||||||||    
T  31767163 ggaccgtccacatcgagtctagaacaaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttactta 31767262  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| ||| ||||||||| |||||    
T  31767263 taaggtgttc-aacctttactgttttatccgatgtggaacatataacccacac 31767314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 40082565 - 40082412
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    ||||||| |||||||| |||| |||||| | | ||||||  ||| |||   | |||| ||||||||| | |||||||||||| ||||| | |||||||||    
T  40082565 ggaggactatccacatcgaggctagaacaaacgcacaagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttat-gatcctcttac 40082467  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  40082466 ttataaggtgttcaa-cctttactattttatccgatgtaggacatataactcacac 40082412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 41157462 - 41157380
Alignment:
Q  97 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||| ||| |||||||||||||||||||    
T  41157462 aaggcaatgggtttatgggtcctcttacttataaggtgttc-aacttttactcttttatctgatgtgggacatataactcacac 41157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 44685285 - 44685231
Alignment:
Q  346 taattaactgcaaaattacaagtatataataattaatggaaaacctaggagaaagc 401  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  44685285 taattaactacaaaattacaagtatataataatt-atggaaaacctaggagaaagc 44685231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 3875330 - 3875479
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| ||| ||| || |||| ||||  | || | ||||| ||| | ||||||||||| ||||||  ||||||||||    
T  3875330 ggaggaccgtccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttac 3875429  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    ||||||||| | | ||||||||||||| |||||||| || |||||||||||    
T  3875430 ttataaggtgtac-aacctttacttttttatccgatgtgtgacatataact 3875479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 5575252 - 5575110
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||||||| || ||||||||  |||| | |||| ||| ||||| | |||| || |||  ||||| ||||||||||||||||||||    
T  5575252 tccacatcgaggctagaactacctcataagagaga--gacgccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggt 5575155  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
     ||||| |||||||| ||||||||||  |||||||||||| |||||    
T  5575154 gttcaa-cctttactcttctatccgacgtgggacatataattcaca 5575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 30630702 - 30630791
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| |||||| ||| ||||||||||||| | | ||||||||||| |||| |||||||| || ||||||||| ||||||    
T  30630702 aaactttaaggcaatgtgtttatgggttctcttacttataaag-tgtcaaacctttaattttttatccgatgtgagacatataaatcacac 30630791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 39066264 - 39066353
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||||| ||||| |||| ||||| ||||||||| ||||| |||||||||||||||||||| ||| | |||||||||||||    
T  39066264 aaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaa-cctttacttttctatccgatgtggaatatataactcacac 39066353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 50052087 - 50052176
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||  |||  |||||| |||||||||||||||||| | ||||| |||||||| || |||||||| |||||||||||||||||||    
T  50052087 aaactttaagaaaataggtttatgggtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataactcacac 50052176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 21378122 - 21378194
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||| | ||||| |||||||| ||||||||||| |||||||||||||| ||||    
T  21378122 gtttatgggtcctcttacttataagatattcaa-cctttactgttctatccgatctgggacatataactgacac 21378194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 29798288 - 29798204
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || ||||| || | |||||||||||||||||    
T  29798288 ttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatccaatgtaggacatataactcacac 29798204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 22793429 - 22793283
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaa-tgagtttattggtcctcttacttataagg 132  Q
    |||| |||||||  ||||| ||| ||||||  ||| ||||||| |||| |||| |||| |  |||||||| || |||||| | |||||| |||||||| |    
T  22793429 tccatattgaggccagaacaaccacacaagtaagagagacgtcacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaag 22793330  T
Q  133 ttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| ||| ||||||||||| |||| |||||||||||||||||||    
T  22793329 ttttcaa-cctctacttttctatacgatgtgggacatataactcacac 22793283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 37556205 - 37556116
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttact-tttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||| |||||| |||||||||||||||||| | ||||| |||||||| ||| |||||||| |||||||||||||||||||    
T  37556205 aaaccttaaggctatgggtttat-ggtcctcttacttataagatgttcaa-cctttactatttttatccgatgtgggacatataactcacac 37556116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 45084457 - 45084387
Alignment:
Q  109 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||||| ||||| |||||||| || |||||||| ||||| |||||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtgggagatataactcacac 45084387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 4956311 - 4956218
Alignment:
Q  65 agagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccg 158  Q
    ||||| ||||||| |||| ||||| ||| |||||  ||||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||    
T  4956311 agagatagacgtcacacttttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttc-aacctttacttttctatccg 4956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 22077900 - 22077981
Alignment:
Q  98 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||| |||||||||||||||||| | ||| |||||||| ||||||||||||| |   |||||||||||||||    
T  22077900 aggctatgagtttatgggtcctcttacttataagatgttc-aacctttatttttctatccgatttaaaacatataactcacac 22077981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 26661962 - 26662051
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||  |||||| |||| ||| ||||||||||| ||||| |||||||| || |||| ||||||||| |||||||||||||    
T  26661962 aaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaa-cctttactcttttatctgatatgggatatataactcacac 26662051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 14319023 - 14318875
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||||||| |||||| ||| |||||   ||| ||||  | |||| ||||||||| | ||||||||||   ||||| |||| |||||||||    
T  14319023 ggaccgtccacattgaggctagaacaaccgcacaaataagagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttactta 14318924  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||| ||| |||||||||| || |||||||  ||| ||||||||||||    
T  14318923 taaggtgttc-aacctttactattttatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 34649594 - 34649443
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||| ||  ||| ||||| | |||| ||||||||| | |||||||| |  |||||| ||| ||   |||||    
T  34649594 ggaccgtccacatcgaggctagaacaaccacactagcaagagagacgcctcactcttacccaaaaccttaaggcattaggtttatgggttcttgcactta 34649495  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  34649494 taaggtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 34649443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 1188627 - 1188741
Alignment:
Q  66 gagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgg 164  Q
    |||| ||||| | |||| ||||||||| | |||| |||||||||||||  ||| ||| ||||||||  | ||||| |||  |||||||||||||||||||    
T  1188627 gagagagacgccacacttttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaa-cctccacttttctatccgatatgg 1188725  T
Q  165 gacatataactcacac 180  Q
     |||||||||||||||    
T  1188726 aacatataactcacac 1188741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 9956057 - 9955912
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattgg-tcctcttacttataaggtt 134  Q
    ||||| |||| |||| | ||| ||||||  ||| |||| || |||| ||||||||| | ||||||||||  ||||| ||| ||||||||||||||| ||     
T  9956057 cacatcgaggctagagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtg 9955958  T
Q  135 ttcaaacctttacttttct-atccgatatgggacatataactcacac 180  Q
    ||||| ||||||||||| | ||| ||| |||||||||||||||||||    
T  9955957 ttcaa-cctttactttttttatctgatgtgggacatataactcacac 9955912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41759577 - 41759488
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| | || ||||||||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  41759577 aaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaa-cttttactattttatccgatgtgtgacatataactcacac 41759488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 37850681 - 37850753
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||||||||| ||||| ||| |||| || ||| |||| |||||||||||||||||||    
T  37850681 gtttatgggttctcttacttataaggtgttcaa-cctctactgttttatgcgatgtgggacatataactcacac 37850753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 11977436 - 11977285
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| |||  |  ||| |||| || |||| ||||||||| | |||||||| |  ||||||  || ||||||||||    
T  11977436 ggaccgtccacatcgaggctagaacaaccgcacttgcaagagagacatcacactcttacccaaaaccttaaggcattaggtttatgagtgctcttactta 11977337  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| | |||||| || || ||||| |||||||||||||||||||    
T  11977336 taaggtgttcaa-catttactgttttacccgatgtgggacatataactcacac 11977285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 37555800 - 37555735
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| || ||||| |||| ||| || |||||||| |||||| ||||||||||||    
T  37555800 ggtcctcttacttataatgtattcaa-ccttcactattttatccgatgtgggacttataactcacac 37555735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 38804419 - 38804508
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||  ||| |||||| | ||||||||||||||| || ||||| |||||||| || ||| |||| |||||| ||||||||||||    
T  38804419 aaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaa-cctttactcttttattcgatgtgggacgtataactcacac 38804508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 5528830 - 5528902
Alignment:
Q  102 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||||||||  ||||||||| ||||||| | ||||| |||||||| || |||||||| || |||||||||||    
T  5528830 aatgagtttatgagtcctcttatttataagatgttcaa-cctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 45839707 - 45839635
Alignment:
Q  108 tttattggtcctcttacttataaggttttc----aaacctttacttttctatccgatatgggacatataactca 177  Q
    ||||| |||| ||||||||||||||| |||     |||||||| ||||||||||||| ||||||||||||||||    
T  45839707 tttatgggtcttcttacttataaggtgttcgattcaaccttta-ttttctatccgatgtgggacatataactca 45839635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 1085604 - 1085769
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| |||| ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||| ||||||     
T  1085604 gaggggagccagggggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatg 1085703  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| || ||| |||||||||| || |||||||| |||||||||||||||||||    
T  1085704 ggtcctcttacttataaagtgttc-aacctttactattttatccgatgtgggacatataactcacac 1085769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 7517750 - 7517585
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| || | |||||| |||||| |||| |||||| ||| |||||| |||| ||||  | |||| ||||||||| | ||||||||||| ||||||     
T  7517750 gaggggagccaaggggaccacccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatg 7517651  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  7517650 ggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatataactcacac 7517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 30244426 - 30244275
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| |||| | |||| ||| |||||| |||| ||||  | |||| ||||||||| | ||||||||||| ||||||  |||||||||||||    
T  30244426 ggaccatccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttactta 30244327  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  30244326 taaggtcttcaa-cctttactcttttatccgatgtgggacatataactcacac 30244275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 37533013 - 37533163
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| ||||||||||| | | ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||||||||||||||    
T  37533013 ggaccgtccacatcgaggttagaacaagcgcacaagcaagagagacaccacact-ttacccaaaaccttaaggcaatgagtttatgggtcctcttactta 37533111  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || ||||| || |||||||||||||||||||    
T  37533112 taaggtgttc-aacctttactattttatccaatgtgggacatataactcacac 37533163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 45434784 - 45434641
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| |||| |||||| || |||||||  ||| |||| || |||| ||||||||| | |||||||| | ||||||| |||||||||||||||||||| |    
T  45434784 cacatcgaggctagaacaactccacaagtaagagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgt 45434685  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||||| |||||||||||||| ||||    
T  45434684 tcaa-cctttacttttttatccgatgtgggacatataacttacac 45434641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 16569290 - 16569201
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||||||||||    
T  16569290 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtattc-aacctttactgttctatccgatgtgagacatataactcacac 16569201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 16596372 - 16596461
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||||||||||    
T  16596372 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtattc-aacctttactgttctatccgatgtgagacatataactcacac 16596461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 30245229 - 30245082
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| |||| | |||| ||| ||||||||||| |     | |||| ||||||||| | |||||||||||||||||| |||| |||||||||    
T  30245229 ggaccatccacatcgaggcttgaacaaccacacaagagagacac----cacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttactta 30245134  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| ||| |||||||||||||||    
T  30245133 taaggtgttc-aacctttactcttttatccgatgtggaacatataactcacac 30245082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 8128505 - 8128594
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||  ||| |||||| ||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  8128505 aaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaa-cctttatttttctatccgatatgggacatataactcacac 8128594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 22566726 - 22566815
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||| ||||||||    
T  22566726 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatattactcacac 22566815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 22567041 - 22567191
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| ||||   |||| ||||||||||  ||| ||||  | |||| ||||| ||| | |||||||||||||||||| ||||||||||||||    
T  22567041 ggaccatccacatcgaggcccgaacaaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttactta 22567140  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| | |||||||| ||||||||    
T  22567141 taaggtgttc-aacctttactcttttatccgatgt-ggacatattactcacac 22567191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 28301613 - 28301696
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| |||||| |||||||||||||||||||| ||| | | |||||||||||||||||| || ||||||||||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttc-agcttttacttttctatccgatgtgagacatataactcacac 28301696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 24177529 - 24177443
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||||| |||||| ||||| |||||||||||||| ||| | |||||||| || |||||||| ||||||||||||||||    
T  24177529 aaactttaaggcaatgggtttatgggtccgcttacttataaggtgttc-agcctttactcttttatccgatgtgggacatataactca 24177443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 45433412 - 45433246
Alignment:
Q  14 agaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttat 112  Q
    ||||||||| |||| |||||  |||||| |||| |||||| ||||||||||  ||| ||||  | |||| ||||||||| | ||||||||||  ||||||    
T  45433412 agaggggagccagggggaccgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttat 45433313  T
Q  113 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
      || |||||||||||||||| ||||| |||||||| || |||||||| |||  ||||||||||||||    
T  45433312 gagttctcttacttataaggtgttcaa-cctttactcttttatccgatgtggatcatataactcacac 45433246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 7554119 - 7554030
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||| |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  7554119 aaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 7554030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 20599408 - 20599319
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||||||||||  ||||||||| |||||| || || |  ||||||||||| ||||||||||||||||||||||||||||    
T  20599408 aaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttat-cctttacttttttatccgatatgggacatataactcacac 20599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23441 - 23529
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| ||||||||||||||    
T  23441 aaaccttaaggcaataggtttatgggtcctcttacttataaggtgttc-aacctttactattgtatccgatgtggaacatataactcaca 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 41854802 - 41854643
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattgg 115  Q
    ||||||||||| ||||| || ||||||||| |||||| ||| ||||||  ||||||||||| |||| |||||| |||| |||||||| |   ||||| ||    
T  41854802 ggggagtcagggggaccgtctacattgaggctagaacaaccgcacaagtaagaaagacgtcacactcttacccaaaaccttaaggcattatatttatagg 41854703  T
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    || |||| |||||||||| ||| |||||||||| || || | ||| ||||||||||||||||    
T  41854702 tcatcttgcttataaggtgttc-aacctttactctttta-ctgatgtgggacatataactca 41854643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 11845285 - 11845198
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| |||||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||||||||    
T  11845285 aaaccttaaggcaatggatttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 6054654 - 6054565
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| || ||||||||||| ||||    
T  6054654 aaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttc-aacatttactattttatccgatgtgagacatataactaacac 6054565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 29157659 - 29157570
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| |||| ||||||||||||||| ||||| |||||||| || |||||| | |||||||||||||||||||    
T  29157659 aaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaa-cctttactattttatccggtgtgggacatataactcacac 29157570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 34218033 - 34218186
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| | |||| |||  ||||| |||| ||||  | |||| ||||||||| | ||||| ||||| ||||||  ||||||| ||    
T  34218033 ggaggaccgtccacatcgaggcttgaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcac 34218132  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||||||| ||||| | ||||||||| |||||||| || |||||||||||||||    
T  34218133 ttataaggtgttcaa-catttacttttttatccgatgtgagacatataactcaca 34218186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 36939797 - 36939886
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| |||||||||||||||||||| ||| ||| |||||| || ||| |||| |||||||||||||||||||    
T  36939797 aaaccttaaggcaatggatttatgggtcctcttacttataaggtgttc-aacttttactattttatacgatttgggacatataactcacac 36939886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 40094783 - 40094927
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||| | ||| |||||| ||||||||||||||||||||     
T  40094783 ccacatcgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtg 40094882  T
Q  135 ttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||  |||||||||| || ||| |||| || ||||||||||||||||    
T  40094883 tt-gaacctttactcttttattcgatgtgagacatataactcacac 40094927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 41910663 - 41910747
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||||| |||||| |||||||| | ||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  41910663 ttaagccaatgggtttatgggtcctctcagttataaggtattcaa-cctttactcttttatccgatgtgggacatataactcacac 41910747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 180
Target Start/End: Original strand, 118339 - 118454
Alignment:
Q  65 agagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatg 163  Q
    ||||| ||||| | |||| ||||||||| | ||| || |||| |||||| | ||||||||||||| |||| ||||| |||||||||||||||| ||| ||    
T  118339 agagatagacgccacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaa-cctttacttttctatctgatgtg 118437  T
Q  164 ggacatataactcacac 180  Q
    |||||||||||| ||||    
T  118438 ggacatataacttacac 118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 43241589 - 43241500
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||| |||||||  ||||| ||||||||||||| ||||| |||||| |||| |||||||| ||| |||||||||||||||    
T  43241589 aaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaa-cctttatttttttatccgatgtggaacatataactcacac 43241500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 1085312 - 1085391
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||| |||||||||||||||||| ||| ||||||||||| || | ||| ||| |||||| || ||||||||||||||||||    
T  1085312 aaaccttaaggcaatgagtttatgggttctcttacttatgagttgttc-aacttttactattttatccgatatgggacata 1085391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 30032723 - 30032572
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||| ||| |||| ||||||||| | ||||||| ||  |||||| | | ||||||||||    
T  30032723 ggaccgtccacatcgaggatagaacaaccgcacaagcaagagagatgtcacactcttacccaaaaccttaaggctataggtttatggatactcttactta 30032624  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||  ||| ||| || ||| |||| |||||||||||||||||||    
T  30032623 taaggtgttcaacactt-actcttttattcgatgtgggacatataactcacac 30032572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 37533366 - 37533517
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  | | ||||  | |||| ||||||||| | |||||||||||  ||||| ||||||||||||||    
T  37533366 ggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttactta 37533465  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || ||| | || | | |||||||||||||||    
T  37533466 taaggtgttc-aacctttactattttattcaatgtagaacatataactcacac 37533517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 19122825 - 19122740
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| |||||||||||  |||||  ||||||||||||||||||| ||| |||||||||| || |||||||| | ||||||||||||||    
T  19122825 aaaccttaaggcaatggatttatgagtcctcttacttataaggtgttc-aacctttactattttatccgatgt-ggacatataactca 19122740  T

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Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 30245561 - 30245499
Alignment:
Q  117 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||    
T  30245561 cctcttacttataaggtgttcaa-cctttactcttttatctgatgtgggacatataactcacac 30245499  T

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Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 30255406 - 30255344
Alignment:
Q  117 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||| |||||    
T  30255406 cctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataacgcacac 30255344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 14681604 - 14681515
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||| |||||| || ||||||||||| ||||| ||||| |||||||| || |||| ||| |||||||||||||| ||||    
T  14681604 aaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaa-cctttactattttatctgatgtgggacatataacttacac 14681515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 30244771 - 30244706
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| ||||||||| ||||| |||||||| || ||||| || |||||||||||||||||||    
T  30244771 ggtcctcttatttataaggtgttcaa-cctttactcttttatccaatgtgggacatataactcacac 30244706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 30253644 - 30253537
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| |||| | |||| ||| ||||||||||| |     | |||| ||||||||| | |||||||||||||||||| ||| ||||||||||    
T  30253644 ggaccatccacatcgaggcttgaacaaccacacaagagagacac----cacactcttacccaaaaccttaaggcaatgagtttatgggttctcttactta 30253549  T
Q  128 taaggttttcaa 139  Q
    |||||| |||||    
T  30253548 taaggtcttcaa 30253537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 40230355 - 40230444
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| | ||| |||||| |||||||||||||||||| | ||| ||| ||||||||| ||| |||| |||||||||||||| ||||    
T  40230355 aaaccttaagactatgggtttatgggtcctcttacttataagatgttc-aacttttacttttttattcgatgtgggacatataacttacac 40230444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 47129189 - 47129100
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| || ||| |||||| ||||||||||||||||||   ||||| |||||||| || |||||||| || ||||||||||||||||    
T  47129189 aaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaa-cctttactattttatccgatgtgagacatataactcacac 47129100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 36109007 - 36109070
Alignment:
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| ||||| |||||||| || |||||||| || || |||||||||||||    
T  36109007 tcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgagaaatataactcacac 36109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 36534865 - 36534930
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 173  Q
    |||||| |||||||||||||||||||| ||| ||||| |||| || |||||||  ||||||||||||    
T  36534865 gtttatgggtcctcttacttataaggtgttc-aacctctactgttttatccgaggtgggacatataa 36534930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 36623054 - 36622965
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| | ||||| |||||||||  | ||  |||||||||| || |||||||| |||||||||||||||||||    
T  36623054 aaaccttaaggcaatggatttatggatcctcctacttataaaatgtt-taacctttactattttatccgatgtgggacatataactcacac 36622965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 45754809 - 45754721
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||| ||||||  ||| ||||||||||||||| ||| ||| |||||| || |||||||| | |||||||||||||||||    
T  45754809 aaaccttaaggctatgggtttatgagtcatcttacttataaggtgttc-aacatttactattttatccgatgt-ggacatataactcacac 45754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 4124152 - 4124240
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| |||| |||||||||||||||||||||| |||||||| | | ||||||||  | ||||||| ||||| | |||||| ||| |||||    
T  4124152 aaaccttaatgcaatgagtttattggtcctctcacttataaag-tgtcaaacctcaaattttctaaccgatgtaggacatgtaattcaca 4124240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 24838724 - 24838855
Alignment:
Q  50 gaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcct-cttacttataaggttttcaaacctttac 147  Q
    |||| ||| ||||||  ||| ||||||| |||| ||||||||| | ||||| ||| | |||||| | |||| |||||||||||||| ||||| |||||||    
T  24838724 gaacaaccacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaa-cctttac 24838822  T
Q  148 ttttctatccgatatgggacatataactcacac 180  Q
    | || ||| |||| || ||||||||||| ||||    
T  24838823 tcttttattcgatgtgagacatataacttacac 24838855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 18603108 - 18603273
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| |||||| ||| ||||||| |||| |||||||||| ||||||  ||| ||| | | |||| ||||||||| | ||||||||||| ||||||     
T  18603108 gaggggagccaggagaaccgtccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatg 18603207  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  18603208 ggtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 18603273  T

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Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 26074761 - 26074617
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| ||||||||| | ||| ||| || |||| ||||  | |||| ||||||||| | ||||||||||| |||||| ||||||||||||||||||||     
T  26074761 ccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtg 26074662  T
Q  135 ttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| |||||||||| || |||||||||||| |||||||||||||||    
T  26074661 ttc-aacctttactcttttatccgatatggaacatataactcacac 26074617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 32487549 - 32487399
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| |||| |||||| ||| || |||  ||| | ||||| |||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  32487549 ggaccatccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 32487450  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || ||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  32487449 ta-ggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 32487399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 1028505 - 1028670
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    ||||||||  ||| ||||| ||||||| |||| |||||| ||| |||||| |||| ||||| | |||| ||||| ||| | ||||||  ||  ||||||     
T  1028505 gaggggagctagggggaccgtccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatg 1028604  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| || ||||  |||||||||||||||||||| |||||||||||||||||||    
T  1028605 ggtcctcttacttataaagtgttcat-cctttacttttctatccgatgtgggacatataactcacac 1028670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 3295333 - 3295489
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaactttaaggcaatgagtttattg 114  Q
    ||||||||| ||| ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||| |||| ||||||||||  |||||| |    
T  3295333 gaggggagtgagggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaacacactcttaccaaaaccttaaggcaattggtttatgg 3295432  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||    
T  3295433 gtcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatata 3295489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 36568571 - 36568720
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| |||||||||||  |||| | |||| ||||| ||| | ||||||||||| |||||  |||| ||| |||||    
T  36568571 ggaccttccacatcgaggatagaacaaccacacaagagaga--gacgccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcactta 36568668  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| | |||||||||||||||||| |||||||||||||||||||    
T  36568669 taaggtgttcaa-cttttacttttctatccgatgtgggacatataactcacac 36568720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 36492219 - 36492370
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||| ||||| | | |||| |||| |||||||||||||||||||||    
T  36492219 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttactta 36492318  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  36492319 taaggtgttc-aacctttactcttttatccgatgtgggacatataactcacac 36492370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 38427699 - 38427553
Alignment:
Q  33 catccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataag 131  Q
    ||||||||| ||||||||||| ||| |||||| |||| ||||||| |||| |||| |||| | ||||| |||||  || || |||||||| |||||||||    
T  38427699 catccacatcgaggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctct-acttataag 38427601  T
Q  132 gttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     | ||||| ||||||||||||||||| || |||||||||||||||||||    
T  38427600 atgttcaa-cctttacttttctatccaatgtgggacatataactcacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 40296317 - 40296468
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | | ||||||||| |||||| ||||||||||||||    
T  40296317 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttactta 40296416  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| ||||||| || || |||||||| |||||||||||||||||||    
T  40296417 taaggtgttc-aaccttttctattttatccgatgtgggacatataactcacac 40296468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 299583 - 299494
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||| |||| ||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  299583 aaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 299494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 6224290 - 6224201
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| || |||||||  |||||||||||||||||||    
T  6224290 aaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgaagtgggacatataactcacac 6224201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 6500620 - 6500456
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| | || ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||      
T  6500620 gaggggagcctgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaa 6500521  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| | |||||||||||||||||    
T  6500520 ggtcctcttacttataaggtgttc-aacctttactattttatccgatgt-ggacatataactcacac 6500456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 26590914 - 26591063
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| ||||||||||| ||| ||| || |||| ||||| | |||| |||| |||| | |||||||| ||| ||||| | ||||||||||||||    
T  26590914 accatccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttata 26591013  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||| |||||||||||||| || |||||||| |||| ||| ||||||    
T  26591014 aggtgttc-aacctttacttttcgattcgatatggaacatttaaatcacac 26591063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 9498706 - 9498806
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||| ||| || |||||||||||||    
T  9498706 cactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattctatctgatgtgagacatataactca 9498804  T
Q  178 ca 179  Q
    ||    
T  9498805 ca 9498806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 175
Target Start/End: Original strand, 34753033 - 34753173
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||  |||||| |||| |||||||||||||||    
T  34753033 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggt 34753132  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataact 175  Q
     ||| ||| ||||||||||||||| || ||||||||||||||    
T  34753133 gttc-aacttttacttttctatccaatgtgggacatataact 34753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 41170728 - 41170640
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| ||||||||||| |||||| |||||||||||||||||| | ||| |||||||||| || |||||||| ||||||||||||||||||    
T  41170728 aaaccttaaggcaatgggtttatgggtcctcttacttataagatgttc-aacctttactattttatccgatgtgggacatataactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 11416979 - 11417128
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||||||||| || | |||||| | ||||||||  ||| |||  || |||| |||| |||| | ||||||||||| |||||| | ||||||||||||    
T  11416979 ggaccatccacatcgaagctagaacaatcccacaagcaagagagagatcacactcttacacaaaaccttaaggcaatgggtttatggatcctcttactta 11417078  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||||| ||| |||||||||| || |||||||| ||| |||||||||||||    
T  11417079 taaggtgttc-aacctttactattttatccgatgtggaacatataactcac 11417128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 13415776 - 13415913
Alignment:
Q  43 gaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaac 141  Q
    |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | |||||| |||  |||||| |||||||||||||||||||| ||| |||    
T  13415776 gaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttc-aac 13415874  T
Q  142 ctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||  | |||||||| |||||||||||||||||||    
T  13415875 ctttactaatttatccgatgtgggacatataactcacac 13415913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 26075226 - 26075315
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||| ||||||    
T  26075226 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgagacatataaatcacac 26075315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 27502024 - 27502189
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttatt 113  Q
    ||||||||  ||| ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||| ||| | ||||||||||  ||||||     
T  27502024 gaggggagctagggggaccgtccacatcgaggatagaacaaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatg 27502123  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||  |||||||||| || ||||| || |||||||||||||||||||    
T  27502124 ggtcctcttacttataaggtgtt-taacctttactattttatccaatgtgggacatataactcacac 27502189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 35150156 - 35150012
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||||||||||||||| ||| ||| || |||| ||||  | |||| ||||||||| | ||||| |||||  ||||| |||| |||||||||||||||    
T  35150156 tccacattgaggttagaacaaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggtc-tcttacttataaggt 35150058  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||| ||| || |||||||| |||||||||||||||||||    
T  35150057 gttcaa-ccttgactcttttatccgatgtgggacatataactcacac 35150012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 41632888 - 41632787
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | |||| ||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| |    
T  41632888 cactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataactta 41632790  T
Q  178 cac 180  Q
    |||    
T  41632789 cac 41632787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 26074155 - 26074299
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| ||||||||| | ||| ||| || |||| ||||  | |||| ||||||||| | ||||||||||| ||| || ||||||||||| ||| ||||     
T  26074155 ccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtg 26074254  T
Q  135 ttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||||||||||| |||||||| || ||||||||||||||||    
T  26074255 ttcaa-cctttacttttttatccgatgtgtgacatataactcacac 26074299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 624346 - 624201
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| |||||||||| |||| ||||  | |||| ||||||||| | | ||||| ||| |||||| |||| |||||||||||| ||    
T  624346 tccacatcgaggctagaacaaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgt 624247  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || ||| | || |||||||||||||||||||    
T  624246 gttcaa-cctttactattttatacaatgtgggacatataactcacac 624201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 6500916 - 6500828
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||| |||||| ||| ||||||||| ||| |||||||||| || |||||||| | |||||||||||||||||    
T  6500916 aaaccttaaggcaatgagtttatgggtccttttatttataaggtgttc-aacctttactattttatccgatgt-ggacatataactcacac 6500828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 26074395 - 26074323
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||||| ||||| | |||| ||||||||| ||| |||||||||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatc-tttagttttctatctgatgtgggacatataactcacac 26074323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 15370255 - 15370104
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| | ||||||||  ||| ||||  | |||| ||||||||| | |||||||  ||  ||||| ||||||||||||||    
T  15370255 ggaccgtccacatcgaggctagaacaatcccacaagcaagagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttactta 15370156  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| | ||||| |||||||| || ||| |||| |||||||||||||||||||    
T  15370155 taagatgttcaa-cctttactattttattcgatgtgggacatataactcacac 15370104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 25328091 - 25327940
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||||||| |||||| ||| |||  |  ||| ||||  | |||| ||||||||| | |||||||| |  |||||| ||||||||||||||    
T  25328091 ggaccgtccacattgaggctagaacaaccacacttgcaagagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttactta 25327992  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| ||| |||||| || |||||||| | |||||||||||||||||    
T  25327991 taaggtgttc-aacttttactgttttatccgatgtaggacatataactcacac 25327940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 3295086 - 3295160
Alignment:
Q  97 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    ||||||||| |||||| |||| ||||||||||||||| ||| |||||||||| || |||||||| |||||||||||    
T  3295086 aaggcaatgggtttatgggtcttcttacttataaggtgttc-aacctttactattttatccgatgtgggacatata 3295160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 15370561 - 15370447
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| |||||||||   ||| ||||| | |||| |||| |||| | ||||||| ||| |||||| |||||||||||    
T  15370561 ggaggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccacactcttacgcaaaaccttaaggctatgggtttatgggtcctcttac 15370462  T
Q  125 ttataaggttttcaa 139  Q
    ||||||||| |||||    
T  15370461 ttataaggtgttcaa 15370447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 33747860 - 33747783
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 173  Q
    |||||||||||||||||| | ||||||||||||||| || ||  |||||||||| || |||||||| ||||||||||||    
T  33747860 ttaaggcaatgagtttatggatcctcttacttataaagtatt-taacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 42508706 - 42508617
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| ||||||  |||||||||||||| || | || || |||||||||||||||||||| ||||| |||||| ||||||    
T  42508706 aaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaa-cctttacttttctatccgatgtgggatatataattcacac 42508617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 623974 - 623823
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| || ||||||||| |||||| |||||||||| |||| ||||  | |||| |||| |||| | ||||||| || ||||||| | ||  |||||||     
T  623974 ggaccgtctacattgaggctagaacaaccccacaagtgagagagacaccacactcttactcaaaaccttaaggctataagtttatggctcaacttacttg 623875  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||||| |||||||| || |||||||| || ||||||||||||||||    
T  623874 taaagtgttcaa-cctttactattatatccgatgtgagacatataactcacac 623823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 31509710 - 31509628
Alignment:
Q  97 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||  ||||||| |||||||| ||  |||| |||  ||||||||||||||| || ||||||||||||||||    
T  31509710 aaggcaatgagtttatgagtcctctcacttataaagtgctcaa-cctccacttttctatccgatgtgagacatataactcacac 31509628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 2411101 - 2411012
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||| ||||||| ||| |||||||||| ||| | ||||| | ||||||| ||||||| || | |||||||||||||||||    
T  2411101 aaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaa-cttttacttctctatccaatgtaggacatataactcacac 2411012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 24489275 - 24489357
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| |||||| |||  ||||||| ||||||| || || ||||| |||||||||| ||| |||||||||||||||||||    
T  24489275 ttaaggcaatgggtttatgggt--tcttactaataaggtgtttaa-ccttttcttttctatctgatgtgggacatataactcacac 24489357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 26074846 - 26074935
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||  |||||| ||||||| ||||||||  || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  26074846 aaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 26074935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 29549319 - 29549408
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||| |||| |||||| |||| ||||||||||| ||| ||||  |||||||| || |||| ||||||| |||||||||||||||    
T  29549319 aaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcat-cctttactattttatctgatatggaacatataactcacac 29549408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 301025 - 300964
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| ||||| |||||||| || |||| ||| ||||||||||||| |||||    
T  301025 ctcttacttataaggtattcaa-cctttactgttttatctgatgtgggacatataacccacac 300964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 42405660 - 42405749
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| |  ||||||  ||||| |||||| |||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  42405660 aaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaa-cctttactattttatccgatgttggacatataactcacac 42405749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 12662764 - 12662805
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  12662764 aacctttactattttatccgatgtgggacatataactcacac 12662805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 15773024 - 15772859
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||||||  |||||| ||||||| ||||||||||| ||| ||||||  ||| ||||  | |||| ||| ||||| | |||| |||||||||||||     
T  15773024 gaggggagtcaaaaggaccgtccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatg 15772925  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| ||| |||||| || ||||||||||||||||||||||||||||    
T  15772924 ggtcctcttacttataaggtgttc-aacatttactcttttatccgatatgggacatataactcacac 15772859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 42342377 - 42342541
Alignment:
Q  16 aggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattg 114  Q
    ||||||| |||| ||||| |||||||||||| |||||| ||| ||||||  ||| ||||||| |||| |||||| |||| ||||| |||||  ||||| |    
T  42342377 aggggagccagggggaccgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgg 42342476  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||  |||||||||| || |||| ||| |||||||||||||||||||    
T  42342477 gtcctcttacttataaggtgtt-gaacctttactcttttatcggatgtgggacatataactcacac 42342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 33803254 - 33803404
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaa-actttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||||||  ||||| | |||| |||||||| || |||| |||||| |||||| ||||||||||||||    
T  33803254 ggaccgtccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttactta 33803353  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    || ||| ||||| |||||||| || |||||||| ||||||||||||||||||    
T  33803354 tatggtgttcaa-cctttactattttatccgatgtgggacatataactcaca 33803404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 43346790 - 43346944
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||| |||||||    
T  43346790 ggaggaccgtccacatagaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttac 43346889  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  43346890 ttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 43346944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 25739427 - 25739578
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||||||| ||||||  ||| ||||||| |||| ||||||||| | | || ||||||||||||| ||||||||||||||    
T  25739427 ggaccgtccacatcgaggctagaactaccgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttactta 25739526  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || | | ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  25739527 tatgatgttc-aacttttactattttatccgatgtgggacatataactcacac 25739578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 12114550 - 12114715
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||||| || |||||  |||||| | || |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||| ||||| ||||||     
T  12114550 gaggggagtctgggggaccgaccacatcgtggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatg 12114649  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||||| ||||    
T  12114650 ggtcctcttacttataaggtgttc-aacctttacttttctatccgatgtgggatatataacttacac 12114715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 21832407 - 21832496
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||    
T  21832407 aaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaa-cctttacttttctatccaatgtgggacatataactcacac 21832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 15773364 - 15773197
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaaga--cgtcgcactgttacccaaa-ctttaaggcaatgagttta 111  Q
    ||||||||| ||||||| | ||||||| ||||||||||| ||| ||||||  || ||||  | || |||| ||||||||| ||||||||||||||| |||    
T  15773364 gaggggagttaggaggatcgtccacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaaggcaatgagctta 15773265  T
Q  112 ttggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |  ||||||||||||||||| | ||| ||| |||||| || ||| |||| |||||||||||||||||||    
T  15773264 tgagtcctcttacttataagatgttc-aacttttactcttttattcgatgtgggacatataactcacac 15773197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 39934961 - 39935104
Alignment:
Q  33 catccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataag 131  Q
    ||||||||| |||| |||||| ||| ||||||  ||| |||| || |||| |||| |||| ||||||||||||| |||||| | ||||||||||||||||    
T  39934961 catccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataag 39935060  T
Q  132 gttttcaaacctttacttttctatccgatatgggacatataactc 176  Q
    || ||| |||||||||| || |||||||| | |||||||||||||    
T  39935061 gtgttc-aacctttactcttttatccgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 22304663 - 22304574
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||| |||||||    
T  22304663 aaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattc-aacctttactattttatccgatgtgggacatatagctcacac 22304574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 25755564 - 25755399
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccca-aactttaaggcaatgagtttatt 113  Q
    |||||||||  || ||||||||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||| ||||||| | |||||  |||||     
T  25755564 gaggggagttcgggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacgccacacttttacccacaactttaggacaatggatttatg 25755465  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||||||||||||||||| ||| |||||||||| || |||| ||| || ||||||||||||||||    
T  25755464 agtcctcttacttataaggtattc-aacctttactcttttatctgatgtgagacatataactcacac 25755399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 32462964 - 32463054
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| ||||||  ||| ||||||||||||||| ||||| | |||||| ||||||||||| |||||||||||||||||||    
T  32462964 aaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactcacac 32463054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 35946616 - 35946527
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||| | |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  35946616 aaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 35946527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 1634364 - 1634468
Alignment:
Q  77 cgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||| ||||||||| | ||||| ||||| |||||| ||||||||||||||||| || || || | |||| ||||||||||||| ||||||||||||||    
T  1634364 cgcactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataact 1634463  T
Q  176 cacac 180  Q
    |||||    
T  1634464 cacac 1634468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 37990641 - 37990792
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| | | ||||||  ||| ||||  | |||| ||||||||| | ||||||||||||||||||  |||||||||||||    
T  37990641 ggaccgtccacatcgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttactta 37990740  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  37990741 taaggtgttc-aacatttactattttatccgatgtggaacatataactcacac 37990792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 37990979 - 37991130
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| || |||  ||| ||||  | |||| ||||||||| | ||||||| |||||||||| ||||||||||||||    
T  37990979 ggaccgtccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttactta 37991078  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || ||||| || || ||||||||||||||||    
T  37991079 taaggtgttc-aacctttactattttatccaatgtgagacatataactcacac 37991130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 49336693 - 49336840
Alignment:
Q  34 atccacattgaggttagaactaccccacaagaga-gaaagacgtcgcactgttaccca-aactttaaggcaatgagtttattggtcctcttacttataag 131  Q
    ||||||||||||| |||||| ||| ||||| | | || ||||  | |||| ||||||| ||||||||| | ||| |||||| ||||||||||||||||||    
T  49336693 atccacattgaggatagaacaaccgcacaaaaaaagagagacaccacactcttacccagaactttaagactatgggtttatgggtcctcttacttataag 49336792  T
Q  132 gttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||  |||| |||||||||||||||||||| || ||||| ||||||||||    
T  49336793 gtggtcaa-cctttacttttctatccgatgtgagacatgtaactcacac 49336840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 41359774 - 41359904
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| |||| |||||| ||| |||||| |||| ||||| | || | ||||||||| | ||||||||||| |||||| ||||||||||||||||||||     
T  41359774 ccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggta 41359873  T
Q  135 ttcaaacctttacttttctatccgatatggga 166  Q
    ||| |||||||||| || |||||||| |||||    
T  41359874 ttc-aacctttactattgtatccgatgtggga 41359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 29644569 - 29644734
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||||  || ||||||||||||| || | || ||| ||| || |||  ||| ||||| | |||| ||||||||| | ||||| ||||| ||||||     
T  29644569 gaggggagtttgggggaccatccacatcgaagctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatg 29644668  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| |||||||||||||||| ||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  29644669 ggttctcttacttataaggtgttc-aacctttactctttaatccgatgtgggacatataactcacac 29644734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 45901808 - 45901718
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| ||||| | |||  | || |||||||| |||||||||||||||||||    
T  45901808 aaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacac 45901718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 52634789 - 52634681
Alignment:
Q  71 agacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 169  Q
    ||||||| |||| ||||||||| | ||||||||||| |||||| |||| ||||||||||||||  ||||| |||||||| || |||||||| ||||||||    
T  52634789 agacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaa-cctttactgttttatccgatgtgggacat 52634692  T
Q  170 ataactcacac 180  Q
    |||||||||||    
T  52634691 ataactcacac 52634681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 29644904 - 29645055
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| || ||| ||| || |||  ||| ||||| | |||| ||||||||| | ||||| ||||| |||||| ||||||||||||||    
T  29644904 ggaccgtccacatcgaggctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttactta 29645003  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||  |||||||||| || |||||||| |||||||||||||| ||||    
T  29645004 taaggtgtt-taacctttactcttttatccgatgtgggacatataacttacac 29645055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 32589859 - 32589716
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||  |||||| ||| ||||||  ||| |||| ||||||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  32589859 ggaccgtccacatcgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 32589760  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    |||||| ||| |||||||| | || ||||  || |||||||||||    
T  32589759 taaggtgttc-aacctttattattttatcttatgtgggacatata 32589716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 33175725 - 33175817
Alignment:
Q  90 aaactttaaggcaatgagtttatt---ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||||   ||| |||||||||||||||| ||||| |||||||||||||||| ||| || ||||||||||||||||    
T  33175725 aaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaa-cctttacttttctatctgatgtgagacatataactcacac 33175817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 42342089 - 42342196
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||||||||||  ||||||||||    
T  42342089 ggaggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttac 42342188  T
Q  125 ttataagg 132  Q
    ||||||||    
T  42342189 ttataagg 42342196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 4823761 - 4823660
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | |||||||||||||||||| ||||||| |||||||||||| ||  ||| |||||| || |||||||| || ||| |||||||||    
T  4823761 cactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtt-taacttttactattttatccgatgtgagacttataactca 4823663  T
Q  178 cac 180  Q
    |||    
T  4823662 cac 4823660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 7767383 - 7767464
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    ||||| ||||| ||||||  ||||||||| |||||| || | ||| |||||||||||||||||||| ||||||||||||||||    
T  7767383 ttaagacaatgggtttatgagtcctcttagttataaagtgtccaa-cctttacttttctatccgatgtgggacatataactca 7767464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 39389164 - 39389075
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||| |||||| |||||||||| || |||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  39389164 aaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaa-cctttactattttatccgatgtaggacatataactcacac 39389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 9240238 - 9240154
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||  ||||| |||||||||||||||||||| ||||  | ||||||| |||||||||| ||| |||||||||||||||    
T  9240238 ttaaggtaatggatttatgggtcctcttacttataaggtgttcag-cttttacttctctatccgatgtggaacatataactcacac 9240154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 50612541 - 50612605
Alignment:
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||||    
T  50612541 gtcctcttacttataaggtgttcaatc-tttactattttatccgatgtgggacatataactcacac 50612605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 54017905 - 54017969
Alignment:
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  54017905 gtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtaggacatataactcacac 54017969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 42584903 - 42584970
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||| | |||||||||||||||||| ||||| | |||||| ||||||||||| ||||||||||||||    
T  42584903 gtttatggatcctcttacttataaggtgttcaatc-tttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 51886645 - 51886566
Alignment:
Q  100 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||| |||||||||||||||| | | ||| |||||||||| || ||| |||| || ||||||||||||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttc-aacctttactattttattcgatgtgagacatataactcacac 51886566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 53118064 - 53118127
Alignment:
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||||||||| ||||| |||||||| || |||||||||||| |||||||||||||||    
T  53118064 tcctctcacttataaggtgttcaa-cctttactcttttatccgatatggaacatataactcacac 53118127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 45395656 - 45395806
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||| | |||||||||| |||| ||||  | |||| ||||||||| | ||||| ||||| |||||| | |||||||||||||    
T  45395656 gaccctccacatcgaggctagagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttat 45395755  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || || ||  |||||||||| || ||| |||| ||||| |||||||| ||||    
T  45395756 aacgtgtt-taacctttactcttttattcgatgtgggatatataacttacac 45395806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 8327998 - 8327909
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| |  |||||| ||| |||||||||||||| | ||||  |||||||| || |||||||| |||||||||||||||||||    
T  8327998 aaaccttaaggcattacgtttatgggttctcttacttataagatattcat-cctttactcttttatccgatgtgggacatataactcacac 8327909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 31190087 - 31190022
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||||||||| ||| |||||||||| || |||||||| |||||||||| ||||||||    
T  31190087 ggtcctctaacttataaggtgttc-aacctttactcttttatccgatgtgggacatatcactcacac 31190022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 39336293 - 39336382
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||||||||||| | |||||| |||||||| || ||||| |||  |  |||||||||||| |||||||||||||||||||    
T  39336293 aaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaa-cctccaactttctatccgatgtgggacatataactcacac 39336382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 54018190 - 54018351
Alignment:
Q  19 ggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtc 117  Q
    ||||||||| |||||  |||||| |||| |||||| ||| ||||||   || ||||  | |||| ||||||||| | |||||||  |  |||||| ||||    
T  54018190 ggagtcagggggaccgcccacatcgaggctagaacaaccacacaagcatgagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtc 54018289  T
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| ||| || ||||||| || ||||||||   |||||||||||||||||    
T  54018290 ctcttacttataaggtgttc-aatctttactcttttatccgatgcaggacatataactcacac 54018351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 3135137 - 3135224
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| ||| |||| || |||||| ||| || ||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||    
T  3135137 aaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaa-catttactattttatccgatgtgggacatataactcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 37726572 - 37726509
Alignment:
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  37726572 tcctcttacttataaggtattcaa-catttactattttatccgatgtgagacatataactcacac 37726509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 52635046 - 52634991
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    |||| ||||||||| | |||||||||||||||||| |||||||||| |||||||||    
T  52635046 cactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataaggt 52634991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 12747871 - 12747905
Alignment:
Q  146 acttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||| |||||||||||||||||||    
T  12747871 acttttctatccgatgtgggacatataactcacac 12747905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 32462622 - 32462712
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| |||||  |||||| | || ||||||||||||||| ||||| | |||||| ||  || |||| |||||||||||||||||||    
T  32462622 aaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacac 32462712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 33362362 - 33362449
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggga---catataactcacac 180  Q
    |||||| |||| |||||| |||||||||||||||||||| ||| |||||||| | || ||||||| ||| ||   ||||||||||||||    
T  33362362 ttaaggaaatgggtttatgggtcctcttacttataaggtattc-aacctttattattttatccgacatgagatatcatataactcacac 33362449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 36986040 - 36986101
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| ||| |||| |||| |||||||||| |||| |||||||||||||||||||    
T  36986040 ctctcacttataaagttctcaa-ccttcacttttctattcgatgtgggacatataactcacac 36986101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 37011479 - 37011540
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| ||| |||| |||| |||||||||| |||| |||||||||||||||||||    
T  37011479 ctctcacttataaagttctcaa-ccttcacttttctattcgatgtgggacatataactcacac 37011540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 22304292 - 22304251
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  22304292 aacctttactattttatccgatgtgggacatataactcacac 22304251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 39914329 - 39914257
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||| ||||||||| ||||| ||| |||| || |||| ||| || ||||||||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaa-cctctactgttttatctgatgtgagacatataactcacac 39914257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 3384330 - 3384417
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    ||||||||||||| | ||||||| ||||||||| ||||||| || ||  ||||| |||| || ||||  || |||||||||||||||||    
T  3384330 aaactttaaggcattaagtttatgggtcctcttccttataaagtgtt-taacctatactgttttatcatatgtgggacatataactcac 3384417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 10074352 - 10074516
Alignment:
Q  16 aggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattg 114  Q
    ||||||| | || |||| |||||||| |||| |||||| ||| ||| || |||| ||||  | |||| ||||||||| | |||||||||||||||||| |    
T  10074352 aggggagcctgggggactatccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 10074451  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| |||||| | ||||||||||    
T  10074452 gtcctcttacttataaggtgttc-aacctttacttttctatccgatgtgggacctctaactcacac 10074516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 3409407 - 3409264
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| |||||||||||||||||||| |    
T  3409407 cacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgt 3409308  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || |||||||||| || |||| ||| |||||||||||||||||||    
T  3409307 tc-aacctttactattttatctgatgtgggacatataactcacac 3409264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 29518659 - 29518508
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||| |||| |||||| ||||||||||||||    
T  29518659 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttactta 29518560  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  29518559 taaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 29518508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 29519076 - 29518925
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||| |||| |||||| ||||||||||||||    
T  29519076 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttactta 29518977  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  29518976 taaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 29518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 32741335 - 32741184
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||| |||| |||||| ||||||||||||||    
T  32741335 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttactta 32741236  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  32741235 taaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 32741184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 2579496 - 2579645
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| ||||||||||| ||| ||||||  ||| ||||  |  ||| ||||||||| | |||||||||||||||||| || |||||||||||||    
T  2579496 accatccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttata 2579595  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| | ||  |||||||||||| | |||||| |||||||||||||||||||    
T  2579596 agg-tatccgacctttacttttttgtccgatgtgggacatataactcacac 2579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 2377910 - 2377759
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||  ||| | ||||  ||||||||  | |||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  2377910 ggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 2377811  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  2377810 taaggtgttc-aacctttactcttttaaccgatgtgggacatataactcacac 2377759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 10074055 - 10074142
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||||||||||||||| ||||| |||||||||||    
T  10074055 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacgtttacttttctatccgatgtgggatatataactcac 10074142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 32460614 - 32460733
Alignment:
Q  61 caagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccga 159  Q
    |||| |||||||| ||| |||| ||||||||| | ||||||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || ||| |||    
T  32460614 caagtgagaaagatgtcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatacga 32460712  T
Q  160 tatgggacatataactcacac 180  Q
    | |||||||||||||||||||    
T  32460713 tgtgggacatataactcacac 32460733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 2378220 - 2378131
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||| |||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  2378220 aaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 2378131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 3058376 - 3058231
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| ||||||||||| |||| |||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||| | ||||| ||||||||||||    
T  3058376 tccacatcgaggttagaaccaccctacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggt 3058277  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || |||||||| |||||||||||||| ||||    
T  3058276 gttcaa-cctttactattttatccgatgtgggacatataactaacac 3058231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 14748402 - 14748491
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||||||||||| |||||||||| ||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  14748402 aaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttc-aacctttactattttatccgatgtgggacatataactcacac 14748491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 9062402 - 9062501
Alignment:
Q  79 cactgttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| |||||||||  ||||| ||||||||||||  ||||||||||||||||| | ||| |||||||||| || |||||||| |||||||||||||||||    
T  9062402 cacttttacccaaaacttaagacaatgagtttatgagtcctcttacttataagatgttc-aacctttactattttatccgatgtgggacatataactcac 9062500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 10073604 - 10073767
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttatt 113  Q
    |||||||| | | |||||| ||||||| || | |||||| ||| ||| || |||| ||||  | |||| ||||||||| | ||||| ||||||||||||     
T  10073604 gaggggagcctgaaggaccgtccacatcgatgctagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatg 10073703  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    | |||||||||||||||||| ||| ||||||||||||||  |||||| |||||||||||||| ||||    
T  10073704 gatcctcttacttataaggtgttc-aacctttacttttc--tccgatgtgggacatataactaacac 10073767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 10911660 - 10911570
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttac-ttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||| |||| |||| ||| | |||||||||||||||||    
T  10911660 aaactttaaggcaatgagtttatgagtcctcttacttataaggtgttc-aacctttactttttttatctgatgtaggacatataactcacac 10911570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 16455063 - 16454913
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||  |||||| |||||| |||||||    
T  16455063 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattactta 16454964  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||| ||| |||||||||| || |||| ||| ||||||| ||||||||||    
T  16454963 taaggtgttc-aacctttactcttttatctgatgtgggacacataactcaca 16454913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 35210298 - 35210209
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||||||||||    
T  35210298 aaaccttaaggcaatggttttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgagacatataactcacac 35210209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 16107847 - 16107683
Alignment:
Q  16 aggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattg 114  Q
    |||||||| ||| | |||| |||||| |||| |||| | ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| ||||||      
T  16107847 aggggagttaggggtaccacccacatcgaggctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatga 16107748  T
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||| ||  ||||||||||||| |||||||| ||  |||||||||||||||    
T  16107747 gtcctcttacttataaggtgtt-taacctttacttttttatccgatgtgacacatataactcacac 16107683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 2579874 - 2580025
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | || | ||||||||| | |||||||  || |||||| ||||||||||||||    
T  2579874 ggaccttccacatcgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttactta 2579973  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  2579974 taatgtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 2580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 16454731 - 16454580
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||| ||||| | ||||||||||| |||||| ||||||||||||||    
T  16454731 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttactta 16454632  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| ||| |||| | || |||| ||| ||||||| |||||||||||    
T  16454631 taaggtgttc-aacttttattcttttatctgatgtgggacacataactcacac 16454580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 26544197 - 26544054
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    |||||||||| |||||| | | ||||||  ||| |||| || |||| |||| |||| | |||||||  || |||||| ||||||||||||||||| || |    
T  26544197 cacattgaggctagaacaatcgcacaagcaagagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgt 26544098  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| || |||||||| |||||||||||||||||||    
T  26544097 tcaa-cctttactattttatccgatgtgggacatataactcacac 26544054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 1127516 - 1127366
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    |||||| |||||| ||||||||| | ||| || |||  ||| ||||| | |||| ||||||||| | |||||| |||| ||||||  |||||||||||||    
T  1127516 ggaccacccacatcgaggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttactta 1127417  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||| ||| |||||||||| || || ||||| ||||| ||||||||||||    
T  1127416 taaggtgttc-aacctttactattttacccgatgtgggatatataactcaca 1127366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 3415552 - 3415463
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||||| || |||  ||| |||||||||||||||||||    
T  3415552 aaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttc-aacctttactattttatgtgatgtgggacatataactcacac 3415463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 6999860 - 6999949
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| ||||||||| | ||||||||| |||||||| ||||| | ||||||||| |||||||| | |||||||||||||||||    
T  6999860 aaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaa-cttttacttttttatccgatgtaggacatataactcacac 6999949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 16108152 - 16108068
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||| ||| ||| |||||||||||||||    
T  16108152 ttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacatttactcttttatctgatgtggaacatataactcacac 16108068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 2578445 - 2578595
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  | | ||||  | |||| ||||||||| | ||||||| ||| |||||| ||||||||||||||    
T  2578445 ggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttactta 2578544  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||| |||||||||| || |||||| | |||||||||||||||||||    
T  2578545 taaagtgttc-aacctttactcttttatccg-tgtgggacatataactcacac 2578595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 593773 - 593862
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| |  ||||||  ||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||| |||||||||    
T  593773 aaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatacaactcacac 593862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 1950201 - 1950338
Alignment:
Q  43 gaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaac 141  Q
    |||| |||||| ||| ||||||  ||| ||||||| |||| |||| |||| | |||||||| |   ||||| | ||||||||||| |||||| ||||| |    
T  1950201 gaggctagaacaaccgcacaagtaagagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaa-c 1950299  T
Q  142 ctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| || |||||||| |||||||||||||||||||    
T  1950300 ctttactcttttatccgatgtgggacatataactcacac 1950338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 2578823 - 2578987
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||| | || ||||| ||||||| ||||| ||||| ||| ||||||  | | ||||  | |||| ||||||||| | |||||| |||||||||||     
T  2578823 gaggggagcctgggggaccgtccacatcgaggtcagaacaaccacacaagcaaaagagacaccacactcttacccaaaaccttaaggtaatgagtttatg 2578922  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    | |||||||| ||||||||| ||| ||| ||||||||| ||||||||  ||||||||||| ||||||    
T  2578923 gatcctcttatttataaggtattc-aacatttactttt-tatccgatgagggacatataaatcacac 2578987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 2843725 - 2843560
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    ||||||||| ||| ||||| ||||||| |||| |||||| ||| | ||||  ||| |||   | |||| ||||||||| | ||||||||||||||||||     
T  2843725 gaggggagttagggggaccgtccacatcgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaaggcaatgagtttatg 2843626  T
Q  114 gg-tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    || |||||||||||||||||| ||| ||| |||| | || |||||||| ||  ||||||||||||||    
T  2843625 gggtcctcttacttataaggtgttc-aacttttattattttatccgatgtgaaacatataactcaca 2843560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 3409816 - 3409665
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaactttaa-ggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| |||||||||   ||| ||||||| |||||| ||||||||||||||    
T  3409816 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttactta 3409717  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| | ||| ||| |||||| || |||| ||| ||| |||||||||||||||    
T  3409716 taagatgttc-aacttttactattttatctgatgtggtacatataactcacac 3409665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 5832108 - 5832179
Alignment:
Q  108 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| |||||||||||||||||||| ||| |||||||||| || ||||| || |||||||||||||| ||||    
T  5832108 tttatgggtcctcttacttataaggtgttc-aacctttactcttttatccaatgtgggacatataacttacac 5832179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 17135144 - 17135222
Alignment:
Q  101 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||   ||||||| |||||||||| || |||| ||||||| |||||||||| || ||||||||||||||||    
T  17135144 caatgagtttatgaatcctcttgcttataaggtatt-aaacatttacttctctatccgatgtgagacatataactcacac 17135222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 1846842 - 1846753
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| ||| |||||||||||||||| ||| |||||||||| || |||||||| || |||||| || ||||||    
T  1846842 aaaccttaaggcaatggatttatgggtgctcttacttataaggtgttc-aacctttactattttatccgatgtgagacatagaattcacac 1846753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 5958667 - 5958755
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||||||| ||||||||||||  || |||||| ||||||||| ||| |||||||||| || |||||||| |   ||||||||||||||    
T  5958667 aaactttaagacaatgagtttatgagttctcttatttataaggtgttc-aacctttactgttttatccgatgtaacacatataactcaca 5958755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 6071221 - 6071137
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| | || ||| |||||||| || ||||| |||  |||||||||| | || |||||||||||||||||||    
T  6071221 ttaaggcaatgagtttatggatcatctcacttataaagtgttcaa-cctccacttttctattcaatgtgggacatataactcacac 6071137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 12092546 - 12092629
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 174  Q
    |||| |||||||||||||||||| | |||||| |||||||| ||  || |||||  ||||||||||||||| |||||||| ||||    
T  12092546 aaaccttaaggcaatgagtttatggatcctctcacttataaagtgctc-aacctccacttttctatccgatgtgggacatctaac 12092629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 36629393 - 36629242
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||||||||||||||    
T  36629393 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttactta 36629294  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||  ||| |||||||||||||||||| |||||||||||||||||||    
T  36629293 taaggtgtt-taacttttacttttctatccgatgtgggacatataactcacac 36629242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 49076504 - 49076599
Alignment:
Q  84 ttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||||||| |||||||||||||||    
T  49076504 ttacccaaactttaagacaatgggtttataggtcctcttacttataaggtgttc-aacctttactgttttatccgatatggtacatataactcacac 49076599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 3244513 - 3244602
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| |||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||| || ||||||||||||||||    
T  3244513 aaactttaagacaatgagtttatgggtcctcttacttataagatgttc-aacctttacttttctatccgatgtgagacatataactcacac 3244602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41370451 - 41370362
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||| || |||||||| |||||||||||||||||||    
T  41370451 aaactttaaggcaatgggtttatgggtcctcttacttataaggttttc-aacatttactattttatccgatttgggacatataactcacac 41370362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 16888884 - 16888967
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  16888884 taagacaatgagtttataggttctcttacttataaggtattcaa-cctttacttttctatccgatgtgggacatataactcacac 16888967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 39792858 - 39793011
Alignment:
Q  27 gaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttact 125  Q
    ||||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||  | ||||||| ||    
T  39792858 gaggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttct 39792957  T
Q  126 tataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||| | |||||||||||||| ||| |||||||||||||||||||    
T  39792958 tataaggtgttcaa-catttacttttctatctgatgtgggacatataactcacac 39793011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 2740794 - 2740705
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||  || |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  2740794 aaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaa-cctttactgttctatccgatgtgggacatataactcacac 2740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 32941129 - 32941274
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||||| |||| ||||||||| | ||||||||||||||||||  | ||||||| |||||||||    
T  32941129 tccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggt 32941228  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||| |||||||||| |||| |||||| |  ||||||||||||||||    
T  32941229 gttc-aacctttactgttctttccgatgtaagacatataactcacac 32941274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 52884981 - 52884892
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  52884981 aaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 52884892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 55933186 - 55933275
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||| |||| ||||| || |||||||| | |||||||||||||||||    
T  55933186 aaactttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacccttactattttatccgatgtaggacatataactcacac 55933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 16889536 - 16889687
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| ||||||||||| | | ||||||  ||| ||||  |  ||| ||||||||| |||||||||| |  ||||||   ||||||||||||    
T  16889536 ggaccgtccacatcgaggttagaacaatcacacaaggaagagagacaccatactcttacccaaaactttaaggcagtaggtttatgaatcctcttactta 16889635  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||||||||||    
T  16889636 taaggtattcaa-cctttacttttctatccgatttgagacatataactcacac 16889687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 25483504 - 25483341
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattgg 115  Q
    |||||| ||||  |||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||| |     
T  25483504 ggggagccagggagaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgga 25483405  T
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||| | ||||| |||||||| || |||||||| || ||||||||||||||||    
T  25483404 tcctcttacttataagatgttcaa-cctttactattttatccgatgtgagacatataactcacac 25483341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 3340962 - 3340812
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||||| ||||||||||  ||||||||  | |||| ||||||||| | |||||||| || |||||| |||||||||||||||    
T  3340962 gaccgtccacatcgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttat 3340863  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||  || |||||||||| ||  ||| |||  ||||||||||||||||||    
T  3340862 aaggtgctc-aacctttactctttcatctgatgcgggacatataactcacac 3340812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 54109018 - 54108928
Alignment:
Q  79 cactgttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||| |||||||||  ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||    
T  54109018 cactcttacccaaaacttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 2741165 - 2741076
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||   |||| |||||||||||||||||||| ||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  2741165 aaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaa-cctttactattctatctgatgtgggacatataactcacac 2741076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 4955379 - 4955468
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||| ||| |||||| ||| || ||||||||||| ||||||||||||||||    
T  4955379 aaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aaccttaactattttatccgatatgagacatataactcacac 4955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 34646711 - 34646800
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||||||||||  ||||||||| ||||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  34646711 aaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttc-aacatttactgttttatccgatgtgggacatataactcacac 34646800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 179
Target Start/End: Original strand, 51768061 - 51768210
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| ||||||||||| | |||| |||  ||| |||| ||| ||| ||||||||| | ||||| ||||||||||||  ||||||||| ||||    
T  51768061 gaccgtccacatcgaggttagaacaatcccataagtaagagagacatcgtacttttacccaaaaccttaagacaatgagtttatgagtcctcttatttat 51768160  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||| ||| ||| |||||| || ||| |||||| ||||||||||||||||    
T  51768161 aaggtgttc-aacatttactcttatattcgatataggacatataactcaca 51768210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 52884789 - 52884700
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| | || ||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  52884789 aaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 52884700  T

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Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 760278 - 760194
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| |||||||| |||||||| ||| || |||||| | |||||||| |||| |||||||||||||||||||    
T  760278 ttaaggcaatgagtttatgggtcctctcacttataaagttctc-aaccttcatttttctattcgatgtgggacatataactcacac 760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 41707515 - 41707615
Alignment:
Q  79 cactgttacccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| ||||| |||| ||||| |||||||||||| ||| || ||||||||| ||| ||||| |||||||| || |||||||| |||||||||||||||||    
T  41707515 cactcttaccaaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaa-cctttactcttttatccgatgtgggacatataactcac 41707613  T
Q  179 ac 180  Q
    ||    
T  41707614 ac 41707615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 50630817 - 50630904
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||| ||||||||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||||| | |||||||||||||||    
T  50630817 aaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttc-aacctttactattttatccgatgtaggacatataactcac 50630904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 1731647 - 1731797
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||||||| |||||| ||| ||||||  ||| | ||  | |||| ||||||||| | ||||||||||  |||||| |||||||||| |||    
T  1731647 ggaccgtccacattgaggctagaacaaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttattta 1731746  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| | ||||| |||||||| || |||| ||| ||||||||||||||||||    
T  1731747 taagatgttcaa-cctttactgttttatctgatgtgggacatataactcaca 1731797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 22183253 - 22183415
Alignment:
Q  18 gggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggt 116  Q
    ||||||| || ||||| ||||||| |||| |||||| |||  ||||| |||| ||||| | |||| ||| ||||| | ||||||||||| |||||| |||    
T  22183253 gggagtctgggggaccgtccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggt 22183352  T
Q  117 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| ||||||||||  | ||| ||| |||||| || |||||||| ||||| |||||||||||||    
T  22183353 ccttttacttataaattgttc-aacatttactcttttatccgatgtgggatatataactcacac 22183415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 54017596 - 54017746
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||||| ||| || |||  ||| |||| || |||| ||||| ||| | ||||||||||| |||||| |||||||||||||||    
T  54017596 gaccgtccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttat 54017695  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| | ||| |||||||||| || |||| ||  |||||||||||||||||||    
T  54017696 aagatgttc-aacctttactattttatctgacgtgggacatataactcacac 54017746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 49880254 - 49880165
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| || |||||| |||||||||||||||||||| ||| |||||||||| || ||| | || |||||||||||||||||||    
T  49880254 aaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttc-aacctttactattttattcaatgtgggacatataactcacac 49880165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 54741264 - 54741329
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||| ||||||    
T  54741264 ggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataattcacac 54741329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 22028369 - 22028515
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||||||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||| |||||||||||| |||||||||||| |    
T  22028369 ggaccgtccacattgaggctagaacaacctcacaagcaagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaa 22028468  T
Q  128 taaggttttcaaaccttta--cttttctatccgatatgggacatataa 173  Q
    |||||| ||| ||||||||   |||| |||||||| | ||||||||||    
T  22028469 taaggtgttc-aacctttatttttttttatccgatgtaggacatataa 22028515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 39404174 - 39404023
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | |||| || ||||||||||  |||||||||||||    
T  39404174 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttactta 39404075  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||| |||||||||| || ||| | || | |||||||||||||||||    
T  39404074 taaagtgttc-aacctttactcttttattcaatgtaggacatataactcacac 39404023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 44620509 - 44620362
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||  |||||||||| ||| ||||||  ||| | || || |||| ||||||||| | ||||||||||| |||||| ||  |||||| |||    
T  44620509 ggaccgtccacatcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttattta 44620410  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactc 176  Q
    |||||| ||||| |||||||| || |||||||| ||| |||||||||||    
T  44620409 taaggtgttcaa-cctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 45496899 - 45496820
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||||  || |||||||| |||||||||    
T  45496899 aaaccttaagacaatgagtttataggtcctcttacttataaggtgttc-aacctttacgattttatccgatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 10245991 - 10245925
Alignment:
Q  113 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||||| ||||| |||||||| || |||||||| |||| ||||||||||||||    
T  10245991 tggtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtggggcatataactcacac 10245925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 43827595 - 43827492
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaactttaaggcaatgagtttattggtcctcttacttat 128  Q
    ||||| ||||||| ||||||||||| ||| ||||||  ||| ||||  | |||| ||| |||||| |||||||||||| ||||| |||||||||| ||||    
T  43827595 ggaccgtccacatcgaggttagaacaaccgcacaagtaagagagacaccacactcttatccaaaccttaaggcaatgaatttatgggtcctcttatttat 43827496  T
Q  129 aagg 132  Q
    ||||    
T  43827495 aagg 43827492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 22028023 - 22028112
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||  | || |||||||| |||||||||||| ||||||    
T  22028023 aaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttc-aacctttcgtattttatccgatgtgggacatataagtcacac 22028112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 31691272 - 31691202
Alignment:
Q  65 agagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    ||||| ||||| | |||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||    
T  31691272 agagatagacgccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtt 31691202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 36572113 - 36572024
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||  ||||| |||| ||||||||||||||| ||| ||| |||||| || ||| |||| |||||||||||||||||||    
T  36572113 aaaccttaaggcaatggatttatgggtcttcttacttataaggtgttc-aacatttactcttttattcgatgtgggacatataactcacac 36572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 39404492 - 39404403
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||  |||||| |||||||||||||||||||| ||| | |||||||| || |||| ||| |||||||||||||||||||    
T  39404492 aaaccttaaggctataggtttatgggtcctcttacttataaggtgttcca-cctttactcttttatctgatgtgggacatataactcacac 39404403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 49303000 - 49302909
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttactt--ataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||  ||||| | ||||| ||||||||||| |||  ||| |||||||||||||||||||    
T  49303000 aaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaa-cctttacttttttatttgatgtgggacatataactcacac 49302909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 50002575 - 50002431
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggtt 134  Q
    |||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||| |||||  ||||| |||||||||||||| || ||     
T  50002575 ccacatcgaggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtg 50002476  T
Q  135 ttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| |||||||| || |||||||| || ||||||||||||||||    
T  50002475 ttcaa-cctttactcttttatccgatgtgagacatataactcacac 50002431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 54343087 - 54343147
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  54343087 ggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 20826306 - 20826223
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||||| ||| |||||| ||| ||||||||||||| || ||||| | |||||| || |||||||| ||||||||||||||||||    
T  20826306 ttaaggctatgggtttatgggttctcttacttataacgtgttcaa-cttttactattttatccgatgtgggacatataactcaca 20826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 36608661 - 36608812
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||| ||| || |||| ||||  | |||| ||||||||| | ||||| |||||  ||||| | ||||||||||||    
T  36608661 ggaccgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttactta 36608760  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    | |||| ||||| | |||||| || |||||||| | |||||||||||||||||    
T  36608761 tgaggtgttcaa-cttttactcttttatccgatgttggacatataactcacac 36608812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 54108686 - 54108551
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagttt-attggtcctcttacttataaggt 133  Q
    ||||||||||| |||||| ||| ||||||  ||| ||||  | |||| ||| ||||| | |||||||||||| ||| || |||||| |||||||||||||    
T  54108686 ccacattgaggctagaacaaccacacaagcaagatagacaccacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggt 54108587  T
Q  134 tttcaaacctttacttttctatccgatatgggacata 170  Q
     ||||| |||||||| || ||||| ||||||||||||    
T  54108586 gttcaa-cctttactattttatcctatatgggacata 54108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 3341246 - 3341133
Alignment:
Q  67 agaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggg 165  Q
    |||||||| || |||| ||||||||| | ||||  ||||||  |||| ||||||||||||||||| || || || |||||||| || ||||| || ||||    
T  3341246 agaaagacatcacactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaa-cctttactcttttatccaatgtggg 3341148  T
Q  166 acatataactcacac 180  Q
    |||||||||||||||    
T  3341147 acatataactcacac 3341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 18932811 - 18932880
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 160  Q
    |||| ||||||||||| |||||| |||||||||| ||||||||| ||| |||||||||| || ||||||||    
T  18932811 aaaccttaaggcaatgggtttatgggtcctcttatttataaggtattc-aacctttactattttatccgat 18932880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 44621096 - 44621011
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 176  Q
    |||| ||||| ||||||||||||  | ||||||||||||||||| ||| |||||||||| || |||||||| |||| |||| |||||    
T  44621096 aaaccttaagacaatgagtttatgtgccctcttacttataaggtgttc-aacctttactgttttatccgatgtgggtcatacaactc 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 44620737 - 44620665
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||||||||||||||| || ||||| ||| |||| ||  ||||||| |||||||||||||||||||    
T  44620737 gtttatgggtcctcttacttataaagtgttcaa-cctctactatttcatccgatgtgggacatataactcacac 44620665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 20825913 - 20825842
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||| ||| |||||| ||||||||| ||||| |||||||| || |||||||| ||| ||||||||||||||    
T  20825913 gtttatgggtgctcttatttataaggtgttcaa-cctttactcttttatccgatgtggaacatataactcaca 20825842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 34004593 - 34004734
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| |||| |||||| ||| |||||| |||| ||||| | |||| ||| | ||| | |||||| ||||||||||| |||||||||||||||||| | |    
T  34004593 cacatcgaggctagaacaaccgcacaagggagagagacggcacactcttatcgaaaaccttaagg-aatgagtttatgggtcctcttacttataagttgt 34004691  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || |||||||| |||| ||||  || || ||||||||||||||||    
T  34004692 tc-aacctttagtttt-tatcatatgtgtgacatataactcacac 34004734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 54936290 - 54936215
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggga 166  Q
    |||| ||||||||||| |||||| |||||||||||||| ||||| ||| |||||||||| || |||| ||| |||||    
T  54936290 aaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttc-aacctttactattttatctgatgtggga 54936215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 44620362 - 44620304
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||||| ||||| |||||||| || ||||| || ||||||||||||||||    
T  44620362 ctcttacttataaggtgttcaa-cctttactattttatcccatgtgggacatataactca 44620304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 28034323 - 28034234
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||| ||||||| ||| |||| |||||||| || ||||| |||  |||||||||||||||  ||||||||||| ||||||    
T  28034323 aaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaa-cctccacttttctatccgatgcgggacatataattcacac 28034234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 49076837 - 49076981
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||||||||  | |||| | ||||||| | ||||||  ||| |||||| ||| |||||||| |||||||    
T  49076837 tccacatcgaggctagaacaaccgcacaagcaagaaagacaccacactctaacccaaaaccttaaggttatgggtttatgggttctcttact-ataaggt 49076935  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || || || |||||| |||||||||||||||    
T  49076936 gttcaa-cctttactattttagccaatatggaacatataactcacac 49076981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 50459803 - 50459726
Alignment:
Q  102 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||  ||||||||||||||||| | ||||| |||||||| || || ||||| ||| |||||||||||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaa-cctttactcttttaaccgatgtggaacatataactcacac 50459726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 54017788 - 54017845
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| ||||| |||||    
T  54017788 ggtcctcttacttataaggtgttc-aacctttactgttttatccgatgtgggatatata 54017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 3700434 - 3700370
Alignment:
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||||||||||||| ||||| | |||||| || |||||||| | |||||||||||||||||    
T  3700434 gtccttttacttataaggtgttcaa-catttactcttttatccgatgtaggacatataactcacac 3700370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 4390189 - 4390252
Alignment:
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| ||| |||||||||| || |||| ||| ||||| || ||||||||||    
T  4390189 tcctcttacttataaggtgttc-aacctttactcttttatctgatgtgggatatgtaactcacac 4390252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 6975543 - 6975606
Alignment:
Q  115 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||||||||||||||| | ||||| |||||||| || |||| ||| || |||||||||||||||    
T  6975543 gtcctcttacttataagatattcaa-cctttactattttatcggatgtgagacatataactcaca 6975606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 42514805 - 42514654
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| ||||||||||  ||| ||||| | |||| ||||||||| | ||||||| ||| |||||| ||||||||||||||    
T  42514805 ggaccgtccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttactta 42514706  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||| |||||||||||||||| ||| | |||||||||||||||||    
T  42514705 taaggtgttcaa-cctttacttttctatctgatgtaggacatataactcacac 42514654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 28254260 - 28254390
Alignment:
Q  48 tagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaaccttta 146  Q
    |||||| ||||||||||||||| | ||  | |||| ||||||||| | |||||||||||||||||| |||||||||||||||||| | ||| ||||||||    
T  28254260 tagaacaaccccacaagagagagacac--cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttc-aaccttta 28254356  T
Q  147 cttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||| |||||||||||| ||||||    
T  28254357 cttttctatccgatgtgggacatataagtcacac 28254390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 36005888 - 36006032
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||||||||||  ||| ||||| | |||| ||||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  36005888 tccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 36005987  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||| ||| ||||| ||||||| |||| |||||||||||||||||||    
T  36005988 gttc-aacttttac-tttctattcgatgtgggacatataactcacac 36006032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 179
Target Start/End: Original strand, 40679632 - 40679781
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||  |||||| ||||||||||  ||| ||||| | |||| ||||||||| | ||||||| ||| |||||| ||| |||||||||||    
T  40679632 gaccgtccacatcgagactagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttat 40679731  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  40679732 aaggtgttcaaccctt-acttttctatccgatatgggacatataactcaca 40679781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 41283539 - 41283628
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||||    
T  41283539 aaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatatgggacatataactcacac 41283628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 35580714 - 35580876
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattgg 115  Q
    ||||||||||| ||||| ||||||| |||| |||||| |||||||||   ||| ||||| |||||| |||||| |||| ||||||||||| ||||| |||    
T  35580714 ggggagtcagggggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccgcactcttacccaaaaccttaaggcaatgggttta-tgg 35580812  T
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||||||||||| ||| ||| |||| | || |||||||| |||||||||||||||||||    
T  35580813 tcctctcacttataaggtgttc-aacatttattgttttatccgatgtgggacatataactcacac 35580876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 28531366 - 28531467
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | |||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||    
T  28531366 cactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaa-cctttgcttttctatccgatgtgggacatataactca 28531464  T
Q  178 cac 180  Q
    |||    
T  28531465 cac 28531467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 36178613 - 36178758
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||| ||||||||||||||||||||    
T  36178613 tccacatagaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggt 36178712  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||| |||||||||| || |||||||| |||||||||||||||||||    
T  36178713 gttc-aacctttactattttatccgatgtgggacatataactcacac 36178758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 962753 - 962603
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||||||| |||| |||||| ||| ||||||  |||  |||  | |||| ||||||||| | ||||| ||||| |||||| |||||||| ||||||    
T  962753 gaccgtccacatcgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttat 962654  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  962653 aaggtgttcaa-cctttacttttctatccgatgtgggacatataactcacac 962603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 15880422 - 15880268
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||| | ||||||| |||| || ||| ||| ||||||  ||| ||||| | |||| ||||||||| | ||||||||||| |||||| |||||||||||    
T  15880422 ggaggaacgtccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttac 15880323  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| ||| |||||||||| || |||||||| ||| |||||||||||||||    
T  15880322 ttataaggtgttc-aacctttactcttttatccgatgtggaacatataactcacac 15880268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 6421541 - 6421390
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||  |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | | ||||||||||||||||  |||||||||||||    
T  6421541 ggaccgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttactta 6421442  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  6421441 taaggtgttc-aacctttactcttttatccgatgtgggacatataactcacac 6421390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 37106080 - 37105929
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||| |||  |||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||||| ||||||||    
T  37106080 ggaccgtccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttactta 37105981  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || ||| |||| |||||||||||||||||||    
T  37105980 taaggtgttc-aacctttactattttattcgatgtgggacatataactcacac 37105929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 37106347 - 37106193
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| | | ||||||  ||| | ||  | |||| ||||||||| | |||||| |||| |||||| |||||||||||    
T  37106347 ggaggaccgtccacatcgaggctagaacaatcgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttac 37106248  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  37106247 ttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 37106193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 5542689 - 5542778
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||||| || ||| ||||||||||||||||||||||||    
T  5542689 aaaccttaaggcaataggtttatgggtcctcttacttataaggtgttc-aacctttactattttattcgatatgggacatataactcacac 5542778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 14745731 - 14745820
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||| || |||||||||||||||||||    
T  14745731 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatgtgggacatataactcacac 14745820  T

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Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 40733687 - 40733522
Alignment:
Q  16 aggggagtca-ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    |||||||||| || ||||||||||||| |||  | |||||||| |||||| |||| ||||  | |||| ||||||||| ||||||||   |  ||||||     
T  40733687 aggggagtcaagggggaccatccacatcgagacttgaactaccacacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatg 40733588  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||||| | ||||||||| |||| ||| |||||||||||||||||||    
T  40733587 ggtcctcttacttataaggtgttcaa-catttacttttttatctgatgtgggacatataactcacac 40733522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 31899496 - 31899579
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttc-aacatttactattttatccgatgtggaacatataactcacac 31899579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 16542538 - 16542454
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||| |||||||||| || |||||||| |||||| ||||||||||||    
T  16542538 ttaaggcaatgagtttataagtcctcttatttataaggtgttc-aacctttactattttatccgatgtgggacttataactcacac 16542454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 7598684 - 7598614
Alignment:
Q  109 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaa-cctttacttttttatctgatgtgggacatataactcacac 7598614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 40163375 - 40163520
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa--ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||||| |||| ||||||||||| ||| ||||||  ||| ||||  | |||| |||||||||  ||| ||| || |  ||| || |||| |||||||||    
T  40163375 gaccatctacatcgaggttagaacaaccacacaagcaagagagacaccacacttttacccaaaaccttaaagacactaggttaatgggtcatcttactta 40163474  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataac 174  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||    
T  40163475 taaggtgttcaa-cctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 5543050 - 5543151
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | ||||||||||  |||||| | |||||||||||||||||| ||||| |||||||| || |||| ||| ||||||||||||||||    
T  5543050 cactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaa-cctttactattttatcggatgtgggacatataactca 5543148  T
Q  178 cac 180  Q
    |||    
T  5543149 cac 5543151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 6713133 - 6712981
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa--ctttaaggcaatgagtttattggtcctcttactt 126  Q
    ||||| ||||||| |||| |||||| | |||| |||  ||| |||| || |||| |||||||||  | |||| |||||  |||||| |||||||||||||    
T  6713133 ggaccgtccacatcgaggctagaacaatcccataagcaagagagacatcacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttactt 6713034  T
Q  127 ataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| ||| ||| |||||| || |||||||| || ||||||||||||||||    
T  6713033 ataaggtgttc-aacatttactgttttatccgatgtgagacatataactcacac 6712981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 38796299 - 38796371
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||||    
T  38796299 gtttataggtcctcttacttataaggtgttcaa-catttactgttttatccgatgtgggacatataactcacac 38796371  T

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Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 28254176 - 28254254
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 169  Q
    |||||||||||||| | ||||||  |||||||||||||||| || ||| |||||||||||||||||||||| || |||||    
T  28254176 aaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttc-aacctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 37895125 - 37895211
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||||| ||||||  || || |||||| |||||||||||| | |||| ||||||||||||| ||||||||||||||||    
T  37895125 aaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaa-cttttatttttctatccgatgtgggacatataactca 37895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 7598322 - 7598233
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| |||||||||| |||||||||| ||||||||| || || ||||||||||||||| |||| | | |||||||| ||||||    
T  7598322 aaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaa-cctttacttttctattcgatgtagaacatataattcacac 7598233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 12529092 - 12529181
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||||||  ||||||||||||||| ||| ||| || ||||||| || |||  ||| | |||||||||||||||||    
T  12529092 aaactttaaggcaatgagtttatgagtcctcttacttatacggtgttc-aatctttactgttttatttgatgtaggacatataactcacac 12529181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 38796684 - 38796773
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||| |  |||||| |||||||||||||||||||| ||| |||||||| | || |||| ||| |||||||||||||||||||    
T  38796684 aaaccttaaggcattaggtttatgggtcctcttacttataaggtgttc-aacctttattgttttatcagatgtgggacatataactcacac 38796773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 1769973 - 1769897
Alignment:
Q  103 atgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||  ||||||||||||||||||| ||| ||| |||||| || |||||||| || ||||||||||||||||    
T  1769973 atgagtttatgagtcctcttacttataaggtgttc-aacttttactcttttatccgatgtgtgacatataactcacac 1769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 31468814 - 31468899
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||| ||||||||||    |||| | ||||| |||||||| || |||||||| |||||||||||||||||||    
T  31468814 aaaccttaaggcaatgagtttatgggtcctctta----taagatattcaa-cctttactattttatccgatgtgggacatataactcacac 31468899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 15511547 - 15511646
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | ||||| ||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||| | || |||||||||||||    
T  15511547 cactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttc-aacctttactcttttatccgttgtgtgacatataactca 15511645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 30313303 - 30313189
Alignment:
Q  59 cacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 157  Q
    |||||| |||| ||||| | |||| ||||||||| | |||||||||||||||| | |||||||| |||||||| || ||| |||||  ||||||||||||    
T  30313303 cacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataa-gtgttc-aacctccacttttctatcc 30313206  T
Q  158 gatatgggacatataac 174  Q
    ||| || ||||||||||    
T  30313205 gatgtgagacatataac 30313189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 37894761 - 37894844
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||||||||  |||||  ||| |||||||||||||||||| |  ||||||||||||||| | || ||||||||||||||||||    
T  37894761 ttaaggcaatggatttatgagtcttcttacttataaggtttttag-cctttacttttctattcaatgtgggacatataactcaca 37894844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 30323558 - 30323469
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||||||||||||||| |||||||| |||| ||| || ||| |||||  | ||||||||| ||| ||||||||||||| |||||    
T  30323558 aaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttc-aacctccaattttctatctgatttgggacatataacacacac 30323469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 33561515 - 33561604
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| |||||||||||| |||||||| |||||||| || ||  |||||  ||||||||||| ||| ||| |||||||||||||||    
T  33561515 aaaccttaagacaatgagtttatgggtcctctcacttataaagtgtt-taacctccacttttctatctgatgtggaacatataactcacac 33561604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 33731742 - 33731653
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||  |||||| | ||||||||||||||||||  || |||||||||| || |||||||| || || |||||||||||||    
T  33731742 aaaccttaaggcaataggtttatggatcctcttacttataaggtgctc-aacctttactcttttatccgatgtgagatatataactcacac 33731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 36178333 - 36178422
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| ||||| ||||||  |||| |||||||||||||| ||| | |||||||| || |||||||  |||||||||||||||||||    
T  36178333 aaaccttaagacaatgggtttatgagtccccttacttataaggtgttcca-cctttactattttatccgaagtgggacatataactcacac 36178422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 6422278 - 6422126
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattgg 115  Q
    ||||| ||||| ||||  ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||| ||| | ||||||| ||| |||||| ||    
T  6422278 ggggaatcagggggacagtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggtttatggg 6422179  T
Q  116 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 169  Q
    |||||||| |||||| || ||||| ||||||||||| |||| ||| ||||||||    
T  6422178 tcctcttaattataatgtgttcaa-cctttacttttttatctgatgtgggacat 6422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 14745358 - 14745446
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||| ||||||||||| |||||| ||||||| |||||| ||| | ||| |||| ||||| || ||| |||| ||||||||||||||||||    
T  14745358 aaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttc-aaccattactattttattcgatgtgggacatataactcaca 14745446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 29677064 - 29676908
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtc-----ctctt 122  Q
    ||||||||||||| |||||| |||| |||||||||   ||| ||||  | |||| ||||  ||| | ||||||||||| |||||| ||||     ||||     
T  29677064 ggaccatccacatcgaggttggaacaaccccacaattaagagagacaccacactcttacttaaagccttaaggcaatgggtttatgggtcttctcctctc 29676965  T
Q  123 acttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || |||||||| || ||||||||||| || |||||||| |||||||||||||||||||    
T  29676964 acctataaggtgtt-aaacctttactcttttatccgatgtgggacatataactcacac 29676908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 36178223 - 36178311
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac 167  Q
    |||| ||||||||| | ||||||||||| |||||| ||| | |||||||||||||| ||| |||||||||| || |||||||| ||||||    
T  36178223 cactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttc-aacctttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 37632678 - 37632750
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||  | | |||||||||||| || |||||||| | |||||||||||||||||    
T  37632678 gtttatgggtcctcttacttataaaatgt-caaacctttactattttatccgatgtaggacatataactcacac 37632750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 9231343 - 9231257
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    ||||||||||||  || ||| || | |||||||| ||||||  | ||||| |||||||||||||||| |||||| |||||||||||||    
T  9231343 aaactttaaggcggtgggttgatggatcctcttatttataatatgttcaa-cctttacttttctatctgatatgagacatataactca 9231257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 40733950 - 40733888
Alignment:
Q  117 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| || ||| ||||||| || ||| |||| |||||||||||||||||||    
T  40733950 cctcttacttataaggtgtt-aaatctttactcttttattcgatgtgggacatataactcacac 40733888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 3673236 - 3673122
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttattgg 115  Q
    |||||| |||| ||||| ||||||| |||| |||||| ||| ||| ||  ||| |||| || |||| ||| ||||| | |||| ||||||||||||| |     
T  3673236 ggggagccagggggaccgtccacatcgaggctagaacaaccacactagtaagagagacatcacactcttagccaaaatcttaaagcaatgagtttatgga 3673137  T
Q  116 tcctcttacttataa 130  Q
    |||||||||||||||    
T  3673136 tcctcttacttataa 3673122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 29874087 - 29874176
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| |||||| |||||||  | |||||| || ||||| |||  ||||||||||| ||| ||||||||||||| |||||    
T  29874087 aaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaa-cctccacttttctatctgatgtgggacatataacacacac 29874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 36785675 - 36785716
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  36785675 aacctttactattttatccgatgtgggacatataactcacac 36785716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 29676622 - 29676543
Alignment:
Q  97 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||||| ||| |||| |||||||| || ||| || ||||||| || ||||| || || |||||||||||||    
T  29676622 aaggcaatgagtttatgggttctctcacttataatgtgttc-aatctttactcttttatccaatgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 29873569 - 29873684
Alignment:
Q  59 cacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 157  Q
    |||||| |||| ||||||| |||| |||| |||| | ||||||||||||||||||  ||||||  ||||||||  | ||| |||||  |||||||||||     
T  29873569 cacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttc-aacctccacttttctatct 29873667  T
Q  158 gatatgggacatataac 174  Q
    ||| |||||||| ||||    
T  29873668 gatgtgggacatgtaac 29873684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 33953816 - 33953923
Alignment:
Q  72 gacgtcgcactgttacccaaacttt-aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||||| |||| ||||||||| ||| |||||||   |||||| |||||||| |||||||  || ||||| |||  ||||||||||| ||| |||||| ||    
T  33953816 gacgtcacactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaa-cctccacttttctatctgatgtgggactta 33953914  T
Q  171 taactcaca 179  Q
    |||||||||    
T  33953915 taactcaca 33953923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 42515078 - 42515031
Alignment:
Q  122 tacttataaggttttcaaacctttacttttctatccgatatgggacata 170  Q
    |||||||||||| || || |||||||||||||||||||| |||||||||    
T  42515078 tacttataaggtgtttaa-cctttacttttctatccgatgtgggacata 42515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 3669857 - 3669692
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttatt 113  Q
    ||||||||  ||| ||||||||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||||||||||     
T  3669857 gaggggagctagggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatg 3669758  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  3669757 agtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 3669692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 40518740 - 40518587
Alignment:
Q  27 gaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttact 125  Q
    ||||||| |||||||||||| |||||| ||| ||||||  |||  |||||| |||| ||||||||| | ||||| || || |||||| |||||||||| |    
T  40518740 gaggaccgtccacattgaggctagaacaaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatt 40518641  T
Q  126 tataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||    
T  40518640 tataaggtgttcaa-cctttacttttctatctgatgtgggacatataactcacac 40518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 147588 - 147456
Alignment:
Q  48 tagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaaccttta 146  Q
    |||||||||| ||||||  ||| ||||| | |||| ||||||||| ||||||||||||  |||||| |||||||||| ||||||||| ||||| ||||||    
T  147588 tagaactaccgcacaagcaagagagacgccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaa-ccttta 147490  T
Q  147 cttttctatccgatatgggacatataactcacac 180  Q
    || || |||||||| |||||||||||||||||||    
T  147489 ctcttttatccgatgtgggacatataactcacac 147456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 34835303 - 34835216
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||    
T  34835303 aaactttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatcggatgtgggacatataactcac 34835216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 3038289 - 3038443
Alignment:
Q  26 ggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttac 124  Q
    |||||||| ||||||| |||| |||||| ||| ||||||  ||| ||| | | |||| ||||||||| | ||||||||||| |||||| |||||| ||||    
T  3038289 ggaggaccgtccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttac 3038388  T
Q  125 ttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  3038389 ttataaagtgttcaa-cctttactattttatccgatgtgggacatataactcacac 3038443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 9608839 - 9608750
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||  ||| |||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  9608839 aaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaa-cctttacttttctatccgatatgggacatataactcacac 9608750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 25561817 - 25561969
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc--aaactttaaggcaatgagtttattggtcctcttactt 126  Q
    ||||| ||||||| |||| |||| | ||| ||||||  ||| ||| ||| |||| ||||||  |||| ||||| |||||||||||| |||||||||||||    
T  25561817 ggaccttccacatcgaggctagagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttactt 25561916  T
Q  127 ataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  25561917 ataaggtgttc-aacgtttactcttttatccgatgtgggacatataactcacac 25561969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 41972252 - 41972163
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||| ||||||| |||||| |||||| | ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  41972252 aaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaa-cctttacttttctatccgatgtgggacatataactcacac 41972163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 178
Target Start/End: Original strand, 70277 - 70425
Alignment:
Q  30 gaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttat 128  Q
    |||| ||| ||||||||||||||| ||| ||||||  ||| ||||||| |||| ||||| ||| | |||||||| || |||||| |||||||||||||||    
T  70277 gaccgtccgcattgaggttagaacaaccacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttat 70376  T
Q  129 aaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    ||| | ||| ||| |||||| || |||||||| |||||||||||||||||    
T  70377 aagatgttc-aacatttactcttttatccgatgtgggacatataactcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 45121962 - 45122063
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||| | ||||||||||||||||||  |||||||||||||||| || ||| |||||||||| || ||| |||| ||||||||||||||||    
T  45121962 cactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttc-aacctttactattttatgcgatgtgggacatataactca 45122060  T
Q  178 cac 180  Q
    |||    
T  45122061 cac 45122063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 9309444 - 9309360
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||  |||||||||||||||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  9309444 ttaaggcaatgagtttaagggtcctcttacttataaggtgttc-aacatttactcttttatccgatgtgggacatataactcacac 9309360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 8918766 - 8918917
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| ||||||| ||| ||| |||| |  ||||||||||| |||| |||||| |||| ||||| ||||  |||||| ||||||||||||||    
T  8918766 ggaccgtccacatcgaggttaaaacaaccacacacgcaagaaagacgtcacactcttacccaaaaccttaagtcaataggtttatgggtcctcttactta 8918865  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||| || ||| |||||||||| | ||||| ||| |||||||| ||||||||||    
T  8918866 taaagtgttc-aacctttactctgctatctgatgtgggacatgtaactcacac 8918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 34835028 - 34834881
Alignment:
Q  33 catccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataag 131  Q
    ||||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||||||||||  ||| |||||||||||||    
T  34835028 catccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataag 34834929  T
Q  132 gttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || ||  |||||||||| || ||||| || |||||||||||||||||||    
T  34834928 gtgtt-taacctttactattttatccaatgtgggacatataactcacac 34834881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 45122067 - 45122210
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    ||||| |||| |||||| ||||||||||  ||| ||||  | |||| ||||||||| | |||||  ||||||||||| ||| |||||||||||||||| |    
T  45122067 cacatcgaggctagaacaaccccacaagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgt 45122166  T
Q  136 tcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    || |||||||||| || |||||||| || ||||||||||||||||    
T  45122167 tc-aacctttactattttatccgatgtgagacatataactcacac 45122210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 43398132 - 43398224
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctc---ttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| ||||| |||||||   ||| ||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||    
T  43398132 aaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaa-cctttacttttctatccgatatgagatatataactcacac 43398224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 1013935 - 1014024
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  1013935 aaactctaaggcaatgggtttattggtcctcttacttatagggtgttc-aacttttactattttatccgatgtggaacatataactcacac 1014024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 3670210 - 3670065
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||| |||  |||||| ||||||| ||||||||||||    
T  3670210 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggt 3670111  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     || ||||||||||| || |||||||| |||||||||||||||||||    
T  3670110 gtt-aaacctttactattttatccgatgtgggacatataactcacac 3670065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 30359425 - 30359276
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    |||||||||||||||| || ||| ||  ||||||| ||| ||||  | |||| ||||||||| | ||||||| ||| |||||| ||||||||| ||||||    
T  30359425 accatccacattgaggctaaaacaacatcacaagaaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttata 30359326  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  30359325 aggtgttcaa-catttactcttttatccgatgtgagacatataactcacac 30359276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 34835569 - 34835481
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc-cgatatgggacatataactcac 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||  ||  |||||||||||||||||    
T  34835569 aaactttaaggcaatgagtttatgggtcctcttacttataaggtgtt-aaacctttactattttatcgggacgtgggacatataactcac 34835481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 34835835 - 34835747
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc-cgatatgggacatataactcac 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||  ||  |||||||||||||||||    
T  34835835 aaactttaaggcaatgagtttatgggtcctcttacttataaggtgtt-aaacctttactattttatcgggacgtgggacatataactcac 34835747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 5420745 - 5420663
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 173  Q
    |||| ||||||||||| ||||||  ||||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||||||    
T  5420745 aaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaa-cctttactattctatccgatgtgggacatataa 5420663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 33113419 - 33113517
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | |||||||||||||||||| ||||||||||||||||||   ||| |||||||||| || |||||||| | ||||||||||||||    
T  33113419 cactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttc-aacctttactattttatccgatgtaggacatataactca 33113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 1014249 - 1014398
Alignment:
Q  31 accatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttata 129  Q
    ||||||||||| |||| |||||| ||| ||||||   || ||||  | |||| ||||||||| |||||||| || |||||||  ||||||||||||||||    
T  1014249 accatccacatcgaggctagaacaaccgcacaagcaggagagacaccacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttata 1014348  T
Q  130 aggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||| |||||||||| || |||| ||| |  ||||||||||||||||    
T  1014349 aggtgttc-aacctttactattttatctgatgtatgacatataactcacac 1014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 45122785 - 45122649
Alignment:
Q  24 caggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctctt 122  Q
    |||| ||||| ||||||| |||| | |||| ||| ||||||  ||| ||||| | ||||  |||||||| | ||||| |||||||||||| |||||||||    
T  45122785 cagggggaccttccacatcgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctctt 45122686  T
Q  123 acttataaggttttcaaacctttacttttctatccgat 160  Q
    ||||||||||| ||| |||||||||| || ||||||||    
T  45122685 acttataaggtgttc-aacctttactattttatccgat 45122649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 9482676 - 9482755
Alignment:
Q  98 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||| || ||| |||||||||||||    
T  9482676 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatcccatgtggaacatataactcac 9482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 41416252 - 41416322
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 178  Q
    |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 18372787 - 18372852
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  18372787 ggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgtgacatataactcacac 18372852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 20870561 - 20870718
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttatt 113  Q
    |||||||| |||||||||| |||| ||  |||||||||| ||| ||||||  ||| ||||  | |||| ||| ||||| | |||||||| || ||||||     
T  20870561 gaggggagccaggaggaccgtccatatcaaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatg 20870660  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 172  Q
    |||||||||||||||||| | ||| |||||||||| || |||| ||| ||| |||||||    
T  20870661 ggtcctcttacttataagatgttc-aacctttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 40579570 - 40579659
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||| ||||| ||||||| |||||||||||||||||||| ||| |||||||||| || ||||| |||||  |||||||| ||||||    
T  40579570 aaaccttaaagcaataagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatatgaaacatataattcacac 40579659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 4154739 - 4154819
Alignment:
Q  99 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||| |||||| | |||||||| || ||||| |||  ||||||||||| ||| |||||||||||||||||||    
T  4154739 ggcaatgagtttatgggtcctttcacttataaagtgttcaa-cctccacttttctatcagatgtgggacatataactcacac 4154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 6876932 - 6877016
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac-atataactcacac 180  Q
    |||| |||||||| ||| |||| ||||| ||||||||| ||||| ||||||||||| |||||||| |||||| |||||||||||||    
T  6876932 taagacaatgagtgtatgggtcatcttatttataaggtgttcaa-cctttacttttttatccgatgtgggactatataactcacac 6877016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 18373004 - 18373084
Alignment:
Q  99 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||  ||||||||| ||||||||| ||| |||||||||| || |||||||  |||||||||||| ||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttc-aacctttactattttatccgaagtgggacatataaatcacac 18373084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 30441235 - 30441086
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataa--- 130  Q
    ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | ||||||||||| |||||| || ||||||||||||||       
T  30441235 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataatta 30441136  T
Q  131 -ggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||| ||||| |||||||| || || ||||| |||||||||||||||||||    
T  30441135 aggtgttcaa-cctttactattttagccgatgtgggacatataactcacac 30441086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 32305647 - 32305503
Alignment:
Q  15 gaggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaact-ttaaggcaatgagtttatt 113  Q
    ||||||||||||| ||||| |||||||  |||||||||| ||  || |||  | ||||||| | |||| ||| ||||| | |||||| |||| ||||||     
T  32305647 gaggggagtcagggggaccgtccacatcaaggttagaacaactgcataagtaataaagacgccacactcttatccaaaatcttaaggtaatgggtttata 32305548  T
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccga 159  Q
    |||| ||||||||||||||| ||| |||||||||| || |||||||    
T  32305547 ggtcttcttacttataaggtgttc-aacctttactattttatccga 32305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 1514003 - 1514065
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| ||||| ||||||||||    
T  1514003 ggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggatatataactca 1514065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 18372004 - 18372142
Alignment:
Q  37 cacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttt 135  Q
    |||||||||| |||| | ||| |||||| |||| | ||  | |||| ||||||||| | |||| ||||||||||||| | |||||||||||||||||| |    
T  18372004 cacattgaggctagagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgt 18372103  T
Q  136 tcaaacctttacttttctatccgatatgggacatataact 175  Q
    || |||||||||| || |||  ||| ||| ||||||||||    
T  18372104 tc-aacctttactattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 40518227 - 40518074
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| |||||||  ||| |||||| ||| ||||||  ||| ||||| | |||| ||||||||| | |||||||| || |||||| |||||  |||||||    
T  40518227 ggaccgtccacatcaaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggtttatgggtccatttactta 40518128  T
Q  128 taaggttttcaaacctttac--ttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||  |||| ||||| || ||| |||||||||||||||    
T  40518127 taaggtgttc-aacctttacttttttttatccaatgtggaacatataactcacac 40518074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 9483251 - 9483320
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 160  Q
    |||| ||||| ||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||||||    
T  9483251 aaaccttaagacaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 18372344 - 18372409
Alignment:
Q  114 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  18372344 ggtcttcttacttataaggtgttcaa-cctttactattttatccgatgtgagacatataactcacac 18372409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 37544498 - 37544643
Alignment:
Q  35 tccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    ||||||| |||| |||||| ||| ||||||  ||||||||  | |||| ||||||||| | |||| | ||||  ||||| ||||||||| ||||||| ||    
T  37544498 tccacatcgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgt 37544597  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || |||||||| || ||| ||||||||||||    
T  37544598 gttcaa-cctttactattttatccgatgtgcgacttataactcacac 37544643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 9620745 - 9620829
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||||||||||| |||||||| |||||||| ||  || ||| | |||||||||||| | | || ||||||||||||||||    
T  9620745 ttaaggcaatgagtttatgggtcctctcacttataaagtgatc-aacttctacttttctatctgttgtgagacatataactcacac 9620829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 25561736 - 25561792
Alignment:
Q  118 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 175  Q
    |||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  25561736 ctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 4154350 - 4154432
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 179  Q
    |||||||||||||||||| |||| ||| |||||||| || ||||| |||  ||||||||||| ||| | ||||||||||||||||    
T  4154350 ttaaggcaatgagtttatgggtc-tctcacttataaagtgttcaa-cctccacttttctatctgatgtaggacatataactcaca 4154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 5916023 - 5915928
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctctta 123  Q
    ||||| ||||||| |||| |||||| ||| ||||||  ||| ||||  | |||| ||||||||| | |||||||||||||||||| ||||||||||    
T  5916023 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta 5915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 6651662 - 6651555
Alignment:
Q  17 ggggagtcaggaggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttaccc-aaactttaaggcaatgagtttattgg 115  Q
    ||||||| ||| ||||||||||||| ||||||||||| | | ||||||  ||| ||||  | |||| |||||| |||| |||||||||||| ||||| ||    
T  6651662 ggggagttagggggaccatccacatcgaggttagaacaatcgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgaatttatggg 6651563  T
Q  116 tcctctta 123  Q
    | ||||||    
T  6651562 ttctctta 6651555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 9609179 - 9609114
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc 156  Q
    |||| ||||||| ||| |||||| |||| ||||||||||||| | ||| ||||||||||||||||||    
T  9609179 aaacattaaggcgatgggtttatgggtcatcttacttataagatgttc-aacctttacttttctatc 9609114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 18380081 - 18380170
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| |||||| | || |||||| || || |||||||||||||| ||||| |||||||| || ||| |||| ||||| |||||||||||||    
T  18380081 aaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaa-cctttactattttattcgatgtgggatatataactcacac 18380170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 30359715 - 30359614
Alignment:
Q  79 cactgttacccaaact-ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 177  Q
    |||| ||||||||| | ||||||  ||| ||||||  ||||||||||||||||||| ||| ||| |||||| || |||| ||| || |||||||||||||    
T  30359715 cactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttc-aacttttactcttttatctgatgtgagacatataactca 30359617  T
Q  178 cac 180  Q
    |||    
T  30359616 cac 30359614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 6731950 - 6731909
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  6731950 aacctttactattttatccgatgtgggacatataactcacac 6731909  T

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Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 18372676 - 18372755
Alignment:
Q  99 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||| ||||||  |||||||||||||||| || ||| |||||||||| || ||||||| |||| |||||||| ||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttataa-gtgttc-aacctttactattttatccgaaatggaacatataaatcacac 18372755  T

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Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 45123052 - 45123011
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  45123052 aacctttactattttatccgatgtgggacatataactcacac 45123011  T

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Target: scaffold0078 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 5446 - 5362
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||||    
T  5446 ttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactgttctatccgatgtggaacatataactcacac 5362  T

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Target: scaffold0078; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 5070 - 4987
Alignment:
Q  96 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||| |||| | ||||||||||| | || ||||||||||| |||| |||||| || ||||||||| ||||||    
T  5070 taaggcaatgagtttatgggtctttttacttataagatatt-aaacctttactgttctctccgatgtgagacatataattcacac 4987  T

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Target: scaffold0702 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 516 - 667
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| |||| |||||  ||| | ||||  ||||||||  | |||| ||||||||| | ||||||||||| |||||| ||||||||||||||    
T  516 ggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta 615  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  616 taaggtgttc-aacctttactcttttaaccgatgtgggacatataactcacac 667  T

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Target: scaffold0702; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 229 - 295
Alignment:
Q  113 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  229 tggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 295  T

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Target: scaffold0734 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 5866 - 5782
Alignment:
Q  95 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||||||||||    
T  5866 ttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgcgacatataactcacac 5782  T

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Target: scaffold0734; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 5546 - 5401
Alignment:
Q  36 ccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa--ctttaaggcaatgagtttattggtcctcttacttataaggt 133  Q
    |||||| |||| | |||| ||||||||||  ||| ||||  | |||| |||||||||  ||||||| ||||  |||||| || |||||||||||||||||    
T  5546 ccacatcgaggcttgaacaaccccacaagcaagagagacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggt 5447  T
Q  134 tttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
     ||||| |||||||| || |||||||| | |||||||||||||||||    
T  5446 gttcaa-cctttactattttatccgatgtaggacatataactcacac 5401  T

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Target: scaffold0391 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 1170 - 1259
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||||||| ||||||  ||||| || |||||||||| ||||| |||||||| || ||||| || |||||||||||||||||||    
T  1170 aaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaa-cctttactcttttatccaatgtgggacatataactcacac 1259  T

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Target: scaffold0391; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 3097 - 3138
Alignment:
Q  139 aacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  3097 aacctttactcttttatccgatgtgggacatataactcacac 3138  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 17520 - 17609
Alignment:
Q  90 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||| ||||||| ||| |||||| |||||||||||||| ||||| ||| |||||||||| || |||| ||| || ||||||||||||||||    
T  17520 aaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttc-aacctttactattttatctgatgtgtgacatataactcacac 17609  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 47516 - 47365
Alignment:
Q  29 ggaccatccacattgaggttagaactaccccacaagagagaaagacgtcgcactgttacccaaa-ctttaaggcaatgagtttattggtcctcttactta 127  Q
    ||||| ||||||| ||||||||||| ||| | ||||  ||| ||||  | || | ||||||||| ||||||||||||| |||||| | | ||||||||||    
T  47516 ggaccgtccacatcgaggttagaacaaccgcgcaagcaagagagacaccacatttttacccaaaactttaaggcaatgggtttatggattctcttactta 47417  T
Q  128 taaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||| ||||||| || |||| ||| || ||||| ||| ||||||    
T  47416 taaggtgttcaaa-ctttactattttatcggatgtgagacatttaattcacac 47365  T

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Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 10192 - 10264
Alignment:
Q  107 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 180  Q
    |||||| |||||||||||||||||||| ||| ||| |||||  || |||||||| || ||||||||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttc-aacttttaccattttatccgatgtgagacatataactcacac 10264  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 39877 - 39843
Alignment:
Q  146 acttttctatccgatatgggacatataactcacac 180  Q
    ||||||||||||||| |||||||||||||||||||    
T  39877 acttttctatccgatgtgggacatataactcacac 39843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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