View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20298_low_28 (Length: 249)
Name: NF20298_low_28
Description: NF20298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20298_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 7235233 - 7235009
Alignment:
| Q |
1 |
tagagttttaaaaagtattttcttaaaattagattcgctattaaatgtcttttgagtggatcaatttgttttgttcgtgcttattaaaaaatgtgttgtg |
100 |
Q |
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| T |
7235233 |
tagagttttaaaaagtattttcttaaaattagattcgctattaaatgtcttttgaatggatcaatttgttttgttcgtgcttattaaaaaatgtgttgtg |
7235134 |
T |
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| Q |
101 |
tttatccctttaactcaattaataatgaggttacataaaaacatgacaatcataagaatttattatttttaaagtaacttttaattatctttttaacctt |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7235133 |
tttatccctttaactcaattaataatgaggttgcataaaaacatgataatcataagaatttattatttttaaagtaacttttaattatctttttaacctt |
7235034 |
T |
|
| Q |
201 |
tcatgaaagaaagggggaaattttt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
7235033 |
tcatgaaagaaagggggaaattttt |
7235009 |
T |
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