View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2029_low_6 (Length: 287)
Name: NF2029_low_6
Description: NF2029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2029_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 17 - 276
Target Start/End: Original strand, 42217679 - 42217939
Alignment:
| Q |
17 |
aaatgtatattttcttattaatctatatatacatatacctgtgtctaacacgcctataatgatgtgactttctatgttgggatttctcttcacctttagg |
116 |
Q |
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| T |
42217679 |
aaatgtatattttcttattaatctatatatacatatacctgtgtctaacacgcctataatgatgtgactttctatgttgggatttctcttcacctttagg |
42217778 |
T |
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| Q |
117 |
ggcattcctaagaaatcccatgaccttgttgtgtgtagtttatggtatgtatttggaaacacagataccacattctcctcctctgcattcaattaaattc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42217779 |
ggcattcctaagaaatcccatgaccttgttgtgtgtagtttatggtatgtatttggaaacacagataccacattctcctcctctgcattcaattaaattc |
42217878 |
T |
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| Q |
217 |
cacaatattggatat-atgcataatcataattattattggagaattaatttgtcccttcat |
276 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42217879 |
cacaatattggatataatgcataatcataattattattggagaattaatttgtcccttcat |
42217939 |
T |
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